AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0806760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806760 MtrunA17_Chr5g0421251 99.014 507 5 0 1 507 1 507 0.0 1000
Msa0806760 MtrunA17_Chr1g0152141 66.964 560 170 2 35 594 45 589 0.0 760
Msa0806760 MtrunA17_Chr1g0152151 66.964 560 170 2 35 594 45 589 0.0 758
Msa0806760 MtrunA17_Chr4g0028601 45.887 547 286 5 34 579 46 583 7.33e-168 491
Msa0806760 MtrunA17_Chr1g0196761 44.129 528 287 3 52 578 47 567 2.92e-153 454
Msa0806760 MtrunA17_Chr1g0196751 44.618 511 280 2 52 561 47 555 8.71e-151 447
Msa0806760 MtrunA17_Chr4g0043731 43.303 545 298 8 27 568 33 569 2.43e-149 444
Msa0806760 MtrunA17_Chr8g0342341 40.727 550 316 5 30 575 28 571 1.10e-138 416
Msa0806760 MtrunA17_Chr5g0421241 96.386 83 3 0 512 594 1 83 2.72e-53 177
Msa0806760 MtrunA17_Chr5g0440381 21.682 535 342 17 59 559 35 526 8.58e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806760 AT1G26230.1 71.429 574 150 2 27 586 30 603 0.0 837
Msa0806760 AT1G26230.4 72.395 547 137 2 54 586 5 551 0.0 805
Msa0806760 AT1G26230.3 72.376 543 136 2 58 586 1 543 0.0 799
Msa0806760 AT1G26230.2 75.833 480 116 0 27 506 30 509 0.0 752
Msa0806760 AT1G55490.5 65.771 558 187 2 18 575 40 593 0.0 751
Msa0806760 AT1G55490.1 65.771 558 187 2 18 575 40 593 0.0 751
Msa0806760 AT1G55490.3 65.771 558 187 2 18 575 40 593 0.0 751
Msa0806760 AT1G55490.4 65.771 558 187 2 18 575 40 593 0.0 751
Msa0806760 AT1G55490.2 65.771 558 187 2 18 575 40 593 0.0 751
Msa0806760 AT3G13470.1 65.125 562 191 2 14 575 33 589 0.0 744
Msa0806760 AT5G56500.2 66.419 539 181 0 37 575 52 590 0.0 731
Msa0806760 AT5G56500.1 66.419 539 181 0 37 575 52 590 0.0 731
Msa0806760 AT1G26230.5 76.029 413 99 0 27 439 30 442 0.0 650
Msa0806760 AT2G28000.1 45.677 532 284 4 31 561 42 569 6.09e-164 482
Msa0806760 AT3G23990.1 43.640 511 285 2 52 561 46 554 7.71e-148 440
Msa0806760 AT2G33210.1 42.966 526 295 3 37 561 34 555 1.81e-146 437
Msa0806760 AT2G33210.2 42.776 526 291 4 37 561 34 550 4.67e-143 428
Msa0806760 AT3G13860.1 41.495 535 304 4 37 568 33 561 2.23e-142 426
Msa0806760 AT5G18820.1 40.517 580 329 7 4 581 5 570 2.62e-133 403
Msa0806760 AT5G18820.2 41.880 468 262 6 116 581 5 464 5.74e-110 339
Msa0806760 AT5G18820.3 40.097 414 241 4 4 416 5 412 3.41e-89 284
Msa0806760 AT3G11830.1 25.000 496 287 20 59 519 35 480 8.16e-13 71.6
Msa0806760 AT3G11830.2 24.848 495 287 20 59 519 35 478 3.64e-12 69.7

Find 123 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTACCTTGGTTGCATTTA+AGG 0.133783 5_3:+26739296 None:intergenic
GCTATTAAGGCTCCTGCTTT+TGG 0.153958 5_3:-26740724 Msa0806760:CDS
GCAGATGATAACATGAATTT+TGG 0.174735 5_3:-26738574 Msa0806760:CDS
GAAGGTGAATTTCGGTGTTT+TGG 0.202885 5_3:+26742697 None:intergenic
CCCTCTGCAACTATCAAAAT+TGG 0.234800 5_3:+26740811 None:intergenic
GAAAGGATAGCAAGATTATC+AGG 0.265173 5_3:-26739508 Msa0806760:CDS
AATATGTTCAGAAGCTCTTT+TGG 0.267990 5_3:+26740859 None:intergenic
TTCTCCATCATTTACTATCC+TGG 0.274149 5_3:+26742405 None:intergenic
ATGGTTGAAATAAAGATCTT+TGG 0.283879 5_3:+26742648 None:intergenic
GCTTAAGGTTGCTGCTATTA+AGG 0.285891 5_3:-26740737 Msa0806760:CDS
GAATTAGTCATGGGCATTCT+AGG 0.289012 5_3:+26738231 None:intergenic
AATATTTAGTATACCTTTGT+TGG 0.289037 5_3:+26738496 None:intergenic
CAAAAGTCTAGTAATATAAA+AGG 0.302752 5_3:+26738115 None:intergenic
GCCATCACCAACTAAGATAT+TGG 0.320538 5_3:+26742061 None:intergenic
TCTCAATCCCACGAGCAATT+TGG 0.323052 5_3:+26741672 None:intergenic
TACTGTAATAAGAGAAGATA+TGG 0.324638 5_3:-26739823 Msa0806760:CDS
GGAGAATGTTGGGGTTAAAT+TGG 0.330128 5_3:-26742105 Msa0806760:CDS
GGCATAGCCATGGGCTTTCT+AGG 0.333642 5_3:+26738252 None:intergenic
TAAACTTAGGGGTGTGCTTA+AGG 0.354930 5_3:-26740752 Msa0806760:CDS
AGAATGCCCATGACTAATTC+AGG 0.357212 5_3:-26738228 Msa0806760:CDS
CTCTTGTAGGTTATTGCAGC+TGG 0.366669 5_3:-26741707 Msa0806760:intron
CCTTCTTGGATAGTCTTAGA+AGG 0.370600 5_3:+26739158 None:intergenic
GGAGTAGTGACAATTGAAAA+AGG 0.378105 5_3:-26741109 Msa0806760:CDS
AAGATCCATTGGAGAATGTT+GGG 0.381308 5_3:-26742115 Msa0806760:CDS
GAAAATTGGTGCAGGTTGTT+AGG 0.385076 5_3:-26738389 Msa0806760:intron
GAAGATATTGCCATCTTGAC+TGG 0.394235 5_3:-26740679 Msa0806760:CDS
TTATTAATTTCAGATTGAAT+TGG 0.397182 5_3:-26742138 Msa0806760:intron
AATAGTCTAGAGATTGTAGA+AGG 0.400336 5_3:-26741073 Msa0806760:CDS
TCTCCATCATTTACTATCCT+GGG 0.409620 5_3:+26742406 None:intergenic
GTTGTGTTGCACAACAAGTA+TGG 0.420099 5_3:-26742433 Msa0806760:CDS
GAGCTGCTTGGTGTTACATT+GGG 0.422685 5_3:-26742472 Msa0806760:CDS
TGGTGTTACATTGGGTCCTA+AGG 0.423035 5_3:-26742464 Msa0806760:CDS
CTTCGATCGGTGACGAAGTA+GGG 0.424516 5_3:+26741022 None:intergenic
GAAAAGCACAGCTAAATTGT+TGG 0.427787 5_3:-26742814 Msa0806760:five_prime_UTR
ACATCTGTTGTTCTTGCTCA+TGG 0.432656 5_3:-26742032 Msa0806760:CDS
AATGATAATGTAGCAGATAT+AGG 0.438830 5_3:+26742739 None:intergenic
TTGCATAAAGTAGGAAGAAA+AGG 0.444825 5_3:-26741130 Msa0806760:CDS
GATTGAATTGGAAGATCCAT+TGG 0.446903 5_3:-26742126 Msa0806760:CDS
AATTTATATTACCTTAAGAA+TGG 0.448885 5_3:+26739477 None:intergenic
TACTGTCATCTTTCTTCGAT+CGG 0.449682 5_3:+26741009 None:intergenic
TACTCCCATCAGTGACTAGT+AGG 0.452379 5_3:+26739727 None:intergenic
TCTTCGATCGGTGACGAAGT+AGG 0.456122 5_3:+26741021 None:intergenic
CCTGGACAATGAAGAGCAAA+AGG 0.470185 5_3:-26739116 Msa0806760:intron
GATCTTTATTTCAACCATGA+TGG 0.471267 5_3:-26742643 Msa0806760:CDS
AACATTGCAGGCAGCAATTG+AGG 0.471687 5_3:-26739209 Msa0806760:intron
GACTTAGTGGCAGAGCTGCT+TGG 0.472024 5_3:-26742484 Msa0806760:CDS
AAAAGAAGATATTGAATGAA+AGG 0.474163 5_3:-26739525 Msa0806760:CDS
GAAGATCCATTGGAGAATGT+TGG 0.476886 5_3:-26742116 Msa0806760:CDS
GTAGGCAGGGGTGGACTTAG+TGG 0.480322 5_3:-26742497 Msa0806760:intron
ACAAACACAAGTAGAGTTGA+AGG 0.480475 5_3:-26739343 Msa0806760:CDS
ATGGGCTTTCTACGTTGTAA+TGG 0.483727 5_3:+26738282 None:intergenic
ATTGAGGAAGGTGTAGTAGT+TGG 0.497962 5_3:-26739193 Msa0806760:CDS
GTTAAATTGGTGAGACAAGC+TGG 0.504045 5_3:-26742092 Msa0806760:CDS
GGCTTTCTAGGCATAGCCAT+GGG 0.508926 5_3:+26738264 None:intergenic
ACCAATATCTTAGTTGGTGA+TGG 0.509209 5_3:-26742062 Msa0806760:CDS
ATCCCACGAGCAATTTGGAC+AGG 0.510632 5_3:+26741677 None:intergenic
AGAGCTGCTTGGTGTTACAT+TGG 0.512060 5_3:-26742473 Msa0806760:CDS
CTAGAGAAGCAATTGAAAAG+AGG 0.512949 5_3:-26739704 Msa0806760:CDS
TCAAATTAAGATCCTTGTTG+AGG 0.513328 5_3:-26739676 Msa0806760:intron
TCTCATGAAGGCTAGAATCA+TGG 0.516872 5_3:-26738521 Msa0806760:CDS
CTCTTGCGTTCCCCAAAAGC+AGG 0.519386 5_3:+26740712 None:intergenic
TGATACAAGAAGCTTCTTTG+TGG 0.525215 5_3:+26742615 None:intergenic
TGGCAATGTTGTCATAGATA+AGG 0.527203 5_3:-26738718 Msa0806760:intron
TCTAATACCTGAATTAGTCA+TGG 0.529536 5_3:+26738221 None:intergenic
TCTGAGGCTTTGCATAAAGT+AGG 0.532283 5_3:-26741139 Msa0806760:CDS
GCAGGGAACGATTATGTTGT+CGG 0.534522 5_3:-26741172 Msa0806760:CDS
AACACAACATTTCTTCCCTT+AGG 0.534711 5_3:+26742448 None:intergenic
TCTTTGTGGTTGAACCATCA+TGG 0.536125 5_3:+26742629 None:intergenic
AGAACCAAGCACATCCGTGC+TGG 0.538805 5_3:+26739782 None:intergenic
CTTTGCGGTGTAGGCAGGGG+TGG 0.538867 5_3:-26742506 Msa0806760:intron
CTTAATCAAAGAGGGAATGA+AGG 0.545189 5_3:-26742009 Msa0806760:intron
AAAGCCAGCACGGATGTGCT+TGG 0.551613 5_3:-26739786 Msa0806760:CDS
AGTTGCAGAGGGAATTGAGC+AGG 0.552599 5_3:-26740800 Msa0806760:CDS
TAGAGAAGCAATTGAAAAGA+GGG 0.557169 5_3:-26739703 Msa0806760:CDS
TGCTCATGGCTTAATCAAAG+AGG 0.559327 5_3:-26742018 Msa0806760:CDS
TATAGAGCATGCAGCTTCTG+TGG 0.561462 5_3:-26738361 Msa0806760:CDS
GAAGGTGTAGTAGTTGGTGG+TGG 0.561709 5_3:-26739187 Msa0806760:CDS
CCACCCAGGATAGTAAATGA+TGG 0.563310 5_3:-26742409 Msa0806760:CDS
CTAATACCTGAATTAGTCAT+GGG 0.563335 5_3:+26738222 None:intergenic
AATGTAGCAGATATAGGTGA+TGG 0.563556 5_3:+26742745 None:intergenic
TCTACCCTACTAGTCACTGA+TGG 0.564415 5_3:-26739732 Msa0806760:CDS
TCTTATACCTCCAGTCAAGA+TGG 0.565620 5_3:+26740669 None:intergenic
TGCTGCTAGAGACTGTTATG+AGG 0.567003 5_3:-26738545 Msa0806760:CDS
TGGAGAAACTGTTCTCAAAG+AGG 0.567318 5_3:-26742389 Msa0806760:intron
GGGCTTTCTAGGCATAGCCA+TGG 0.567432 5_3:+26738263 None:intergenic
GACAACATTGCCATTTACAC+CGG 0.568042 5_3:+26738728 None:intergenic
TGCTGTTGTGATTGACCGCA+TGG 0.570375 5_3:-26738316 Msa0806760:CDS
GGTGTTACATTGGGTCCTAA+GGG 0.572289 5_3:-26742463 Msa0806760:CDS
GCTCATGGCTTAATCAAAGA+GGG 0.577420 5_3:-26742017 Msa0806760:CDS
TATGTTGCAGAAGTCAGCGC+AGG 0.579617 5_3:-26741190 Msa0806760:CDS
CTGTTATGAGGATCTCATGA+AGG 0.584426 5_3:-26738533 Msa0806760:CDS
TTAACCCCAACATTCTCCAA+TGG 0.585067 5_3:+26742110 None:intergenic
GGGCATTCTAGGCATAGCCA+TGG 0.589080 5_3:+26738242 None:intergenic
ACTCCCATCAGTGACTAGTA+GGG 0.589248 5_3:+26739728 None:intergenic
AGGTGATGGAGAAGATGTCA+TGG 0.591738 5_3:+26742759 None:intergenic
AAAGGATAGCAAGATTATCA+GGG 0.602789 5_3:-26739507 Msa0806760:CDS
CTACCCTACTAGTCACTGAT+GGG 0.603767 5_3:-26739731 Msa0806760:CDS
GAGGAAGGTGTAGTAGTTGG+TGG 0.604792 5_3:-26739190 Msa0806760:CDS
AATCCTGTCCAAATTGCTCG+TGG 0.610174 5_3:-26741680 Msa0806760:CDS
GGCTATGCCTAGAAAGCCCA+TGG 0.611650 5_3:-26738259 Msa0806760:CDS
TGTCGGAAACATGATTTCTG+AGG 0.613481 5_3:-26741155 Msa0806760:CDS
CCTTCTAAGACTATCCAAGA+AGG 0.614465 5_3:-26739158 Msa0806760:CDS
ACTAATTCAGGTATTAGAGT+GGG 0.614833 5_3:-26738216 Msa0806760:CDS
ACTGTAATAAGAGAAGATAT+GGG 0.620581 5_3:-26739822 Msa0806760:CDS
GACTAATTCAGGTATTAGAG+TGG 0.621274 5_3:-26738217 Msa0806760:CDS
TTGTGTTGCACAACAAGTAT+GGG 0.623105 5_3:-26742432 Msa0806760:CDS
AGATCCATTGGAGAATGTTG+GGG 0.623470 5_3:-26742114 Msa0806760:CDS
GGCATTCTAGGCATAGCCAT+GGG 0.628138 5_3:+26738243 None:intergenic
TCTAAGACTATCCAAGAAGG+TGG 0.633828 5_3:-26739155 Msa0806760:CDS
TTGCAGGCAGCAATTGAGGA+AGG 0.634346 5_3:-26739205 Msa0806760:intron
ATCCTGTCCAAATTGCTCGT+GGG 0.638174 5_3:-26741679 Msa0806760:CDS
CCATCATTTACTATCCTGGG+TGG 0.643127 5_3:+26742409 None:intergenic
AGATGCCTTAAATGCAACCA+AGG 0.644330 5_3:-26739301 Msa0806760:intron
GAAGGAATGCAATTCGATCG+CGG 0.648682 5_3:-26741055 Msa0806760:CDS
ACAACAAGTATGGGCCACCC+AGG 0.649218 5_3:-26742423 Msa0806760:CDS
TAGAATCATGGATCCAACAA+AGG 0.660491 5_3:-26738509 Msa0806760:intron
GATATTGCCATCTTGACTGG+AGG 0.662526 5_3:-26740676 Msa0806760:intron
AGTAGATCTTCACAACTGCA+AGG 0.668006 5_3:-26740990 Msa0806760:intron
ATTACAACGTAGAAAGCCCA+TGG 0.668199 5_3:-26738280 Msa0806760:CDS
ATGTTGCAGAAGTCAGCGCA+GGG 0.672978 5_3:-26741189 Msa0806760:CDS
AAGGATAGCAAGATTATCAG+GGG 0.686126 5_3:-26739506 Msa0806760:CDS
ATGGTTGTTCTAGTTCCATG+CGG 0.719533 5_3:+26738301 None:intergenic
AGGATAGCAAGATTATCAGG+GGG 0.726273 5_3:-26739505 Msa0806760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAATTCTATAAAATAATT+AGG - chr5_3:26740051-26740070 Msa0806760:intron 10.0%
!!! CTAAGTTTATTTTTAATAAT+TGG + chr5_3:26740224-26740243 None:intergenic 10.0%
!! CAATTATTAAAAATAAACTT+AGG - chr5_3:26740222-26740241 Msa0806760:intron 10.0%
!! ATTATTAAAAATAAACTTAG+GGG - chr5_3:26740224-26740243 Msa0806760:intron 10.0%
!!! AATCATTTTATTTTCATTTT+TGG - chr5_3:26741535-26741554 Msa0806760:intron 10.0%
!!! AATGTTTTATATATTACAAT+TGG - chr5_3:26742807-26742826 Msa0806760:five_prime_UTR 10.0%
!! TTTGTGTTTAATAAAAAAGA+AGG + chr5_3:26738311-26738330 None:intergenic 15.0%
!! TTATTAATTTCAGATTGAAT+TGG - chr5_3:26738849-26738868 Msa0806760:intron 15.0%
!! AAACAAAAATCATAGAAAAA+TGG + chr5_3:26739595-26739614 None:intergenic 15.0%
!!! TTTCATTACTATTCTAAAAA+TGG + chr5_3:26739638-26739657 None:intergenic 15.0%
!! ATACGATAATAATTCATTAA+AGG - chr5_3:26740652-26740671 Msa0806760:intron 15.0%
!! AATTTATATTACCTTAAGAA+TGG + chr5_3:26741513-26741532 None:intergenic 15.0%
!!! AATTATTCAATGAGATTTTT+TGG - chr5_3:26742330-26742349 Msa0806760:intron 15.0%
!! ATAAAAAAGAAGGTGAATTT+CGG + chr5_3:26738301-26738320 None:intergenic 20.0%
!! TTAATTAAACCATAAGAATG+TGG + chr5_3:26738688-26738707 None:intergenic 20.0%
!!! ACCATATTTGAAAGTTTTAA+TGG - chr5_3:26739112-26739131 Msa0806760:intron 20.0%
!! TCCATTAAAACTTTCAAATA+TGG + chr5_3:26739116-26739135 None:intergenic 20.0%
!!! TTTGCAATTTTGGAATATTT+TGG + chr5_3:26739169-26739188 None:intergenic 20.0%
!!! AAATCATAGAAAAATGGATT+TGG + chr5_3:26739589-26739608 None:intergenic 20.0%
!!! ATTTTATAGAATTCATGTGA+GGG + chr5_3:26740047-26740066 None:intergenic 20.0%
!!! TATTTTATAGAATTCATGTG+AGG + chr5_3:26740048-26740067 None:intergenic 20.0%
!! TAATGTAAAGTCAAAATTAC+AGG + chr5_3:26740457-26740476 None:intergenic 20.0%
!!! TTTGACTTTACATTACAATA+TGG - chr5_3:26740462-26740481 Msa0806760:intron 20.0%
!! TTCAAACTTTATCATATCTT+TGG + chr5_3:26740735-26740754 None:intergenic 20.0%
!! TCTAATATTATACAATGATC+TGG + chr5_3:26741348-26741367 None:intergenic 20.0%
!! AAAAGAAGATATTGAATGAA+AGG - chr5_3:26741462-26741481 Msa0806760:intron 20.0%
!!! TTATTTTCATTTTTGGTATC+AGG - chr5_3:26741542-26741561 Msa0806760:intron 20.0%
!! TCAGTAACTATTTAGAAAAA+TGG - chr5_3:26742001-26742020 Msa0806760:intron 20.0%
!! TAAATATTCAAACCAACAAA+AGG + chr5_3:26742140-26742159 None:intergenic 20.0%
!! AATATTTAGTATACCTTTGT+TGG + chr5_3:26742494-26742513 None:intergenic 20.0%
!! GTATTATGTATGTTGAAAAT+TGG - chr5_3:26742584-26742603 Msa0806760:intron 20.0%
!! TGAAAAATACAGCAATGTTT+TGG + chr5_3:26738134-26738153 None:intergenic 25.0%
!!! TTTTGATTTTCTTGGTATGT+TGG + chr5_3:26738208-26738227 None:intergenic 25.0%
!! AATGATAATGTAGCAGATAT+AGG + chr5_3:26738251-26738270 None:intergenic 25.0%
! ATGGTTGAAATAAAGATCTT+TGG + chr5_3:26738342-26738361 None:intergenic 25.0%
!! GTGGTAAATGGTAATTTTAT+GGG + chr5_3:26738669-26738688 None:intergenic 25.0%
!! TGTGGTAAATGGTAATTTTA+TGG + chr5_3:26738670-26738689 None:intergenic 25.0%
!! TTGGAACACTAAACTAATTT+TGG + chr5_3:26739057-26739076 None:intergenic 25.0%
!!! GATATTTTGATTGAAGTTGT+TGG + chr5_3:26739076-26739095 None:intergenic 25.0%
! CAAAATTGCAAATGAAGTTT+GGG - chr5_3:26739177-26739196 Msa0806760:CDS 25.0%
!! ATGAAAAGAGCACAAATTTA+AGG + chr5_3:26739259-26739278 None:intergenic 25.0%
!!! GAAATACCGATTTTGAAATA+TGG - chr5_3:26739503-26739522 Msa0806760:CDS 25.0%
! AATGAATTATTATCGTATGC+TGG + chr5_3:26740650-26740669 None:intergenic 25.0%
! TGGAAAACAACATTATTGTA+CGG + chr5_3:26740715-26740734 None:intergenic 25.0%
! ATGATAAAGTTTGAATTGCA+TGG - chr5_3:26740740-26740759 Msa0806760:CDS 25.0%
! AACCAAATTTATAGAGGAAA+AGG - chr5_3:26740811-26740830 Msa0806760:CDS 25.0%
!!! ATTCATGGTTGTTTTGTTAT+TGG + chr5_3:26740935-26740954 None:intergenic 25.0%
! TACTGTAATAAGAGAAGATA+TGG - chr5_3:26741164-26741183 Msa0806760:CDS 25.0%
! ACTGTAATAAGAGAAGATAT+GGG - chr5_3:26741165-26741184 Msa0806760:CDS 25.0%
!! ATCTTTTGTAATGACAACTT+TGG + chr5_3:26741235-26741254 None:intergenic 25.0%
! ATTAGAATGAATTTGATGCA+TGG - chr5_3:26741362-26741381 Msa0806760:intron 25.0%
! TAGTTAACAACATCTGAAAA+AGG - chr5_3:26741389-26741408 Msa0806760:intron 25.0%
! GTATTCTACAAAATACGAAA+TGG + chr5_3:26741428-26741447 None:intergenic 25.0%
! AGAACCTGAATCTAAATTAT+AGG - chr5_3:26741614-26741633 Msa0806760:intron 25.0%
!! ATTCTAATTTGTAACATTGC+AGG - chr5_3:26741766-26741785 Msa0806760:intron 25.0%
! TTGTAATGTTATCTGTAGAT+TGG - chr5_3:26742180-26742199 Msa0806760:intron 25.0%
!!! TTTTTCGCTATCATTTTAGT+AGG + chr5_3:26742237-26742256 None:intergenic 25.0%
!! TTTTACTTATATCTTCTGTG+AGG + chr5_3:26742523-26742542 None:intergenic 25.0%
!!! TGTCATGGTTTTGATTTTCT+TGG + chr5_3:26738216-26738235 None:intergenic 30.0%
! GATCTTTATTTCAACCATGA+TGG - chr5_3:26738344-26738363 Msa0806760:CDS 30.0%
! AGTGAGTGAATTTTTCTTTG+CGG - chr5_3:26738466-26738485 Msa0806760:intron 30.0%
TACCATTTACCACATTCTTA+TGG - chr5_3:26738676-26738695 Msa0806760:intron 30.0%
AACCATAAGAATGTGGTAAA+TGG + chr5_3:26738681-26738700 None:intergenic 30.0%
GTTTAATAGGTCTAAGAACA+TGG - chr5_3:26738813-26738832 Msa0806760:intron 30.0%
GCAAAAACCAATATCTTAGT+TGG - chr5_3:26738919-26738938 Msa0806760:intron 30.0%
! CCAAACTTCATTTGCAATTT+TGG + chr5_3:26739179-26739198 None:intergenic 30.0%
CCAAAATTGCAAATGAAGTT+TGG - chr5_3:26739176-26739195 Msa0806760:CDS 30.0%
!! CACAAATGCTATTGACTTTA+GGG - chr5_3:26739229-26739248 Msa0806760:intron 30.0%
!! ACAAATGCTATTGACTTTAG+GGG - chr5_3:26739230-26739249 Msa0806760:intron 30.0%
AGCACTCCATATTTCAAAAT+CGG + chr5_3:26739512-26739531 None:intergenic 30.0%
!!! ATTTTGAAATATGGAGTGCT+TGG - chr5_3:26739512-26739531 Msa0806760:CDS 30.0%
!! TTTACACACTTTGAGATGAA+TGG - chr5_3:26739612-26739631 Msa0806760:intron 30.0%
TTGCTGAATTCAGAAACATT+GGG - chr5_3:26739739-26739758 Msa0806760:CDS 30.0%
TTGCATAAAGTAGGAAGAAA+AGG - chr5_3:26739857-26739876 Msa0806760:intron 30.0%
AATAGTCTAGAGATTGTAGA+AGG - chr5_3:26739914-26739933 Msa0806760:intron 30.0%
! AATATGTTCAGAAGCTCTTT+TGG + chr5_3:26740131-26740150 None:intergenic 30.0%
CACAAAGATAGCATCAAAAT+TGG - chr5_3:26740540-26740559 Msa0806760:intron 30.0%
ACAACGAACCAAATTTATAG+AGG - chr5_3:26740805-26740824 Msa0806760:CDS 30.0%
! AGCCTTTTCCTCTATAAATT+TGG + chr5_3:26740816-26740835 None:intergenic 30.0%
!!! GGTTGTTTTGTTATTGGTTT+AGG + chr5_3:26740929-26740948 None:intergenic 30.0%
ACCATATTGTTCAATTCACT+CGG + chr5_3:26741042-26741061 None:intergenic 30.0%
GAACAATATGGTAGAATACA+TGG - chr5_3:26741050-26741069 Msa0806760:CDS 30.0%
ATATTTACTCAGTGCATTCT+TGG - chr5_3:26741130-26741149 Msa0806760:CDS 30.0%
TAGAGAAGCAATTGAAAAGA+GGG - chr5_3:26741284-26741303 Msa0806760:intron 30.0%
TCAAATTAAGATCCTTGTTG+AGG - chr5_3:26741311-26741330 Msa0806760:intron 30.0%
AAAGGATAGCAAGATTATCA+GGG - chr5_3:26741480-26741499 Msa0806760:intron 30.0%
CCTACCTATAATTTAGATTC+AGG + chr5_3:26741621-26741640 None:intergenic 30.0%
CCTGAATCTAAATTATAGGT+AGG - chr5_3:26741618-26741637 Msa0806760:intron 30.0%
!!! TTTGGTTTGTATCCTTTTGT+TGG - chr5_3:26742125-26742144 Msa0806760:CDS 30.0%
! AAAATGATAGCGAAAAATGC+CGG - chr5_3:26742240-26742259 Msa0806760:intron 30.0%
! GCAGATGATAACATGAATTT+TGG - chr5_3:26742413-26742432 Msa0806760:CDS 30.0%
CTAATACCTGAATTAGTCAT+GGG + chr5_3:26742768-26742787 None:intergenic 30.0%
TCTAATACCTGAATTAGTCA+TGG + chr5_3:26742769-26742788 None:intergenic 30.0%
ACTAATTCAGGTATTAGAGT+GGG - chr5_3:26742771-26742790 Msa0806760:exon 30.0%
! GAAAAGCACAGCTAAATTGT+TGG - chr5_3:26738173-26738192 Msa0806760:CDS 35.0%
! GATTTTCTTGGTATGTTGGT+TGG + chr5_3:26738204-26738223 None:intergenic 35.0%
AATGTAGCAGATATAGGTGA+TGG + chr5_3:26738245-26738264 None:intergenic 35.0%
TGATACAAGAAGCTTCTTTG+TGG + chr5_3:26738375-26738394 None:intergenic 35.0%
! TGAATTTTTCTTTGCGGTGT+AGG - chr5_3:26738472-26738491 Msa0806760:intron 35.0%
AACACAACATTTCTTCCCTT+AGG + chr5_3:26738542-26738561 None:intergenic 35.0%
TTGTGTTGCACAACAAGTAT+GGG - chr5_3:26738555-26738574 Msa0806760:CDS 35.0%
TCTCCATCATTTACTATCCT+GGG + chr5_3:26738584-26738603 None:intergenic 35.0%
TTCTCCATCATTTACTATCC+TGG + chr5_3:26738585-26738604 None:intergenic 35.0%
TGGGTGAATGACTAAAAAGA+AGG + chr5_3:26738650-26738669 None:intergenic 35.0%
TTGATTGACTGTACCACAAT+TGG - chr5_3:26738746-26738765 Msa0806760:CDS 35.0%
TGAAAAATCACCTCCAATTG+TGG + chr5_3:26738762-26738781 None:intergenic 35.0%
CTATTAAACCACCTAAGCAA+CGG + chr5_3:26738802-26738821 None:intergenic 35.0%
GATTGAATTGGAAGATCCAT+TGG - chr5_3:26738861-26738880 Msa0806760:intron 35.0%
AAGATCCATTGGAGAATGTT+GGG - chr5_3:26738872-26738891 Msa0806760:intron 35.0%
!! ACCAATATCTTAGTTGGTGA+TGG - chr5_3:26738925-26738944 Msa0806760:intron 35.0%
CTTAATCAAAGAGGGAATGA+AGG - chr5_3:26738978-26738997 Msa0806760:intron 35.0%
GTAGATGGAATAGTCATGTA+TGG + chr5_3:26739017-26739036 None:intergenic 35.0%
ACTATTCCATCTACTTCTGT+TGG - chr5_3:26739023-26739042 Msa0806760:intron 35.0%
ATTGTTCCAACAGAAGTAGA+TGG + chr5_3:26739032-26739051 None:intergenic 35.0%
TTTGTGGCGTAAGCATATAA+TGG + chr5_3:26739215-26739234 None:intergenic 35.0%
CCTAAAGTCAATAGCATTTG+TGG + chr5_3:26739231-26739250 None:intergenic 35.0%
!! CCACAAATGCTATTGACTTT+AGG - chr5_3:26739228-26739247 Msa0806760:intron 35.0%
! TGCTCTTTTCATTCTCTTGT+AGG - chr5_3:26739267-26739286 Msa0806760:intron 35.0%
AACTACAAGCGAGAATTGAT+AGG + chr5_3:26739711-26739730 None:intergenic 35.0%
TATCAATTCTCGCTTGTAGT+TGG - chr5_3:26739710-26739729 Msa0806760:CDS 35.0%
CTTGCTGAATTCAGAAACAT+TGG - chr5_3:26739738-26739757 Msa0806760:CDS 35.0%
TGCTGAATTCAGAAACATTG+GGG - chr5_3:26739740-26739759 Msa0806760:CDS 35.0%
GGAGTAGTGACAATTGAAAA+AGG - chr5_3:26739878-26739897 Msa0806760:intron 35.0%
TACTGTCATCTTTCTTCGAT+CGG + chr5_3:26739981-26740000 None:intergenic 35.0%
!! TCCAATTTTGATAGTTGCAG+AGG - chr5_3:26740175-26740194 Msa0806760:intron 35.0%
!! CCAATTTTGATAGTTGCAGA+GGG - chr5_3:26740176-26740195 Msa0806760:intron 35.0%
TATGCAAAAACATCACTGCT+TGG - chr5_3:26740600-26740619 Msa0806760:intron 35.0%
! TTGTACGGACAAATTGACTT+TGG + chr5_3:26740700-26740719 None:intergenic 35.0%
ATTGAAGTGGCTTATAGTAG+AGG + chr5_3:26740884-26740903 None:intergenic 35.0%
!! TATTGGTTTAGGCATTACAC+TGG + chr5_3:26740918-26740937 None:intergenic 35.0%
ATATTGTTCAATTCACTCGG+TGG + chr5_3:26741039-26741058 None:intergenic 35.0%
ACCGAGTGAATTGAACAATA+TGG - chr5_3:26741038-26741057 Msa0806760:CDS 35.0%
CAATATGGTAGAATACATGG+TGG - chr5_3:26741053-26741072 Msa0806760:CDS 35.0%
CTAAGATCAAAAGCTAGTGA+TGG + chr5_3:26741085-26741104 None:intergenic 35.0%
CTAGAGAAGCAATTGAAAAG+AGG - chr5_3:26741283-26741302 Msa0806760:intron 35.0%
GAAAGGATAGCAAGATTATC+AGG - chr5_3:26741479-26741498 Msa0806760:intron 35.0%
AAGGATAGCAAGATTATCAG+GGG - chr5_3:26741481-26741500 Msa0806760:intron 35.0%
ACAAACACAAGTAGAGTTGA+AGG - chr5_3:26741644-26741663 Msa0806760:CDS 35.0%
AAGTACCTTGGTTGCATTTA+AGG + chr5_3:26741694-26741713 None:intergenic 35.0%
ACACATTGAAGCAGAGAAAA+AGG + chr5_3:26741717-26741736 None:intergenic 35.0%
! TTTTATGCTATCCACCTTCT+TGG + chr5_3:26741846-26741865 None:intergenic 35.0%
GGATAGCATAAAAATTCTCC+TGG - chr5_3:26741853-26741872 Msa0806760:intron 35.0%
GAATGAATGTAAGCTCATGT+CGG - chr5_3:26742031-26742050 Msa0806760:CDS 35.0%
! TCTGTTGCAAGCATTCTTTT+TGG - chr5_3:26742107-26742126 Msa0806760:CDS 35.0%
TGGCAATGTTGTCATAGATA+AGG - chr5_3:26742269-26742288 Msa0806760:intron 35.0%
TAGAATCATGGATCCAACAA+AGG - chr5_3:26742478-26742497 Msa0806760:CDS 35.0%
TGTATGTTGAAAATTGGTGC+AGG - chr5_3:26742590-26742609 Msa0806760:intron 35.0%
GACTAATTCAGGTATTAGAG+TGG - chr5_3:26742770-26742789 Msa0806760:exon 35.0%
!!! CGGTGTTTTGGAATTGATGA+TGG + chr5_3:26738281-26738300 None:intergenic 40.0%
!!! GAAGGTGAATTTCGGTGTTT+TGG + chr5_3:26738293-26738312 None:intergenic 40.0%
TCTTTGTGGTTGAACCATCA+TGG + chr5_3:26738361-26738380 None:intergenic 40.0%
GTTGTGTTGCACAACAAGTA+TGG - chr5_3:26738554-26738573 Msa0806760:CDS 40.0%
TGGAGAAACTGTTCTCAAAG+AGG - chr5_3:26738598-26738617 Msa0806760:intron 40.0%
ATTGACTGTACCACAATTGG+AGG - chr5_3:26738749-26738768 Msa0806760:CDS 40.0%
AAACACTTGTACCGTTGCTT+AGG - chr5_3:26738788-26738807 Msa0806760:CDS 40.0%
CGTTGCTTAGGTGGTTTAAT+AGG - chr5_3:26738800-26738819 Msa0806760:intron 40.0%
GAAGATCCATTGGAGAATGT+TGG - chr5_3:26738871-26738890 Msa0806760:intron 40.0%
AGATCCATTGGAGAATGTTG+GGG - chr5_3:26738873-26738892 Msa0806760:intron 40.0%
TTAACCCCAACATTCTCCAA+TGG + chr5_3:26738880-26738899 None:intergenic 40.0%
GGAGAATGTTGGGGTTAAAT+TGG - chr5_3:26738882-26738901 Msa0806760:intron 40.0%
GTTAAATTGGTGAGACAAGC+TGG - chr5_3:26738895-26738914 Msa0806760:intron 40.0%
GCCATCACCAACTAAGATAT+TGG + chr5_3:26738929-26738948 None:intergenic 40.0%
ACATCTGTTGTTCTTGCTCA+TGG - chr5_3:26738955-26738974 Msa0806760:intron 40.0%
TGCTCATGGCTTAATCAAAG+AGG - chr5_3:26738969-26738988 Msa0806760:intron 40.0%
GCTCATGGCTTAATCAAAGA+GGG - chr5_3:26738970-26738989 Msa0806760:intron 40.0%
TCACACTGTTATTACATCGC+TGG - chr5_3:26739420-26739439 Msa0806760:intron 40.0%
GACGTTTGATTCAGATCAGA+CGG - chr5_3:26739442-26739461 Msa0806760:intron 40.0%
!! AGTGCTTGGTTTTTATCCGA+CGG - chr5_3:26739526-26739545 Msa0806760:CDS 40.0%
ACATTGGGGTTTGCATTTGT+AGG - chr5_3:26739754-26739773 Msa0806760:CDS 40.0%
TGTCGGAAACATGATTTCTG+AGG - chr5_3:26739832-26739851 Msa0806760:intron 40.0%
! TCTGAGGCTTTGCATAAAGT+AGG - chr5_3:26739848-26739867 Msa0806760:intron 40.0%
AGTAGATCTTCACAACTGCA+AGG - chr5_3:26739997-26740016 Msa0806760:intron 40.0%
CCCTCTGCAACTATCAAAAT+TGG + chr5_3:26740179-26740198 None:intergenic 40.0%
! TAAACTTAGGGGTGTGCTTA+AGG - chr5_3:26740235-26740254 Msa0806760:intron 40.0%
GCTTAAGGTTGCTGCTATTA+AGG - chr5_3:26740250-26740269 Msa0806760:intron 40.0%
!! CTATTAAGGCTCCTGCTTTT+GGG - chr5_3:26740264-26740283 Msa0806760:intron 40.0%
!! TATTAAGGCTCCTGCTTTTG+GGG - chr5_3:26740265-26740284 Msa0806760:intron 40.0%
GAAGATATTGCCATCTTGAC+TGG - chr5_3:26740308-26740327 Msa0806760:intron 40.0%
TCTTATACCTCCAGTCAAGA+TGG + chr5_3:26740321-26740340 None:intergenic 40.0%
!! GCAGTGATGTTTTTGCATAG+TGG + chr5_3:26740599-26740618 None:intergenic 40.0%
! TGGATTTTCACAGGTCGAAA+GGG + chr5_3:26740962-26740981 None:intergenic 40.0%
! TTGGATTTTCACAGGTCGAA+AGG + chr5_3:26740963-26740982 None:intergenic 40.0%
GTGCATTCTTGGAACTTATC+AGG - chr5_3:26741141-26741160 Msa0806760:CDS 40.0%
! GTTTTCTCTGTACCTCAACA+AGG + chr5_3:26741326-26741345 None:intergenic 40.0%
AGGATAGCAAGATTATCAGG+GGG - chr5_3:26741482-26741501 Msa0806760:intron 40.0%
AGATGCCTTAAATGCAACCA+AGG - chr5_3:26741686-26741705 Msa0806760:CDS 40.0%
!! CAGAGAAAAAGGAAGTACCT+TGG + chr5_3:26741706-26741725 None:intergenic 40.0%
! ATTGAGGAAGGTGTAGTAGT+TGG - chr5_3:26741794-26741813 Msa0806760:intron 40.0%
! CCTTCTTGGATAGTCTTAGA+AGG + chr5_3:26741832-26741851 None:intergenic 40.0%
!! CCTTCTAAGACTATCCAAGA+AGG - chr5_3:26741829-26741848 Msa0806760:intron 40.0%
! TCTAAGACTATCCAAGAAGG+TGG - chr5_3:26741832-26741851 Msa0806760:intron 40.0%
TTTATGAGTGAGTGCGTATG+TGG + chr5_3:26741975-26741994 None:intergenic 40.0%
CTTCAGATTGAAGACGTGTT+TGG + chr5_3:26742082-26742101 None:intergenic 40.0%
! GACAACATTGCCATTTACAC+CGG + chr5_3:26742262-26742281 None:intergenic 40.0%
TTGTCATAGATAAGGTCCTG+AGG - chr5_3:26742277-26742296 Msa0806760:intron 40.0%
AACAGTTTCTCAAGAACCTC+AGG + chr5_3:26742296-26742315 None:intergenic 40.0%
CTGTTATGAGGATCTCATGA+AGG - chr5_3:26742454-26742473 Msa0806760:CDS 40.0%
TCTCATGAAGGCTAGAATCA+TGG - chr5_3:26742466-26742485 Msa0806760:CDS 40.0%
GAAAATTGGTGCAGGTTGTT+AGG - chr5_3:26742598-26742617 Msa0806760:intron 40.0%
!! ATGGTTGTTCTAGTTCCATG+CGG + chr5_3:26742689-26742708 None:intergenic 40.0%
ATGGGCTTTCTACGTTGTAA+TGG + chr5_3:26742708-26742727 None:intergenic 40.0%
ATTACAACGTAGAAAGCCCA+TGG - chr5_3:26742707-26742726 Msa0806760:CDS 40.0%
GAATTAGTCATGGGCATTCT+AGG + chr5_3:26742759-26742778 None:intergenic 40.0%
AGAATGCCCATGACTAATTC+AGG - chr5_3:26742759-26742778 Msa0806760:CDS 40.0%
!! AGGTGATGGAGAAGATGTCA+TGG + chr5_3:26738231-26738250 None:intergenic 45.0%
! TTTTTCTTTGCGGTGTAGGC+AGG - chr5_3:26738476-26738495 Msa0806760:intron 45.0%
! TTTTCTTTGCGGTGTAGGCA+GGG - chr5_3:26738477-26738496 Msa0806760:intron 45.0%
!! AGAGCTGCTTGGTGTTACAT+TGG - chr5_3:26738514-26738533 Msa0806760:CDS 45.0%
!! GAGCTGCTTGGTGTTACATT+GGG - chr5_3:26738515-26738534 Msa0806760:CDS 45.0%
!! TGGTGTTACATTGGGTCCTA+AGG - chr5_3:26738523-26738542 Msa0806760:CDS 45.0%
! GGTGTTACATTGGGTCCTAA+GGG - chr5_3:26738524-26738543 Msa0806760:CDS 45.0%
CCATCATTTACTATCCTGGG+TGG + chr5_3:26738581-26738600 None:intergenic 45.0%
CCACCCAGGATAGTAAATGA+TGG - chr5_3:26738578-26738597 Msa0806760:CDS 45.0%
CTCTTGTAGGTTATTGCAGC+TGG - chr5_3:26739280-26739299 Msa0806760:intron 45.0%
AATCCTGTCCAAATTGCTCG+TGG - chr5_3:26739307-26739326 Msa0806760:CDS 45.0%
ATCCTGTCCAAATTGCTCGT+GGG - chr5_3:26739308-26739327 Msa0806760:CDS 45.0%
TCTCAATCCCACGAGCAATT+TGG + chr5_3:26739318-26739337 None:intergenic 45.0%
GGGTTTGCATTTGTAGGTTG+AGG - chr5_3:26739760-26739779 Msa0806760:CDS 45.0%
GCAGGGAACGATTATGTTGT+CGG - chr5_3:26739815-26739834 Msa0806760:CDS 45.0%
GAAGGAATGCAATTCGATCG+CGG - chr5_3:26739932-26739951 Msa0806760:intron 45.0%
! GCTATTAAGGCTCCTGCTTT+TGG - chr5_3:26740263-26740282 Msa0806760:intron 45.0%
GATATTGCCATCTTGACTGG+AGG - chr5_3:26740311-26740330 Msa0806760:intron 45.0%
! GGTTCTCTCATCGATTGAAG+TGG + chr5_3:26740897-26740916 None:intergenic 45.0%
GGTCGAAAGGGTTTGATTCA+TGG + chr5_3:26740950-26740969 None:intergenic 45.0%
CACCTTAGAAAAAGCCAGCA+CGG - chr5_3:26741191-26741210 Msa0806760:CDS 45.0%
!!! ATCCGTGCTGGCTTTTTCTA+AGG + chr5_3:26741196-26741215 None:intergenic 45.0%
TCTACCCTACTAGTCACTGA+TGG - chr5_3:26741255-26741274 Msa0806760:intron 45.0%
CTACCCTACTAGTCACTGAT+GGG - chr5_3:26741256-26741275 Msa0806760:intron 45.0%
ACTCCCATCAGTGACTAGTA+GGG + chr5_3:26741262-26741281 None:intergenic 45.0%
TACTCCCATCAGTGACTAGT+AGG + chr5_3:26741263-26741282 None:intergenic 45.0%
AACATTGCAGGCAGCAATTG+AGG - chr5_3:26741778-26741797 Msa0806760:intron 45.0%
! CCTTTTGCTCTTCATTGTCC+AGG + chr5_3:26741874-26741893 None:intergenic 45.0%
CCTGGACAATGAAGAGCAAA+AGG - chr5_3:26741871-26741890 Msa0806760:intron 45.0%
GCGAAAAATGCCGGTGTAAA+TGG - chr5_3:26742249-26742268 Msa0806760:intron 45.0%
TAGCATATCTTCTGTCGTGC+AGG - chr5_3:26742385-26742404 Msa0806760:intron 45.0%
TGCTGCTAGAGACTGTTATG+AGG - chr5_3:26742442-26742461 Msa0806760:CDS 45.0%
TATAGAGCATGCAGCTTCTG+TGG - chr5_3:26742626-26742645 Msa0806760:CDS 45.0%
!! AATTATTAAAAATAAACTTA+GGG - chr5_3:26740223-26740242 Msa0806760:intron 5.0%
TTTCTTTGCGGTGTAGGCAG+GGG - chr5_3:26738478-26738497 Msa0806760:intron 50.0%
CACTTGTACCGTTGCTTAGG+TGG - chr5_3:26738791-26738810 Msa0806760:CDS 50.0%
ATCCCACGAGCAATTTGGAC+AGG + chr5_3:26739313-26739332 None:intergenic 50.0%
GAGTACACATCATGGACCGT+CGG + chr5_3:26739545-26739564 None:intergenic 50.0%
GGTCCATGATGTGTACTCGT+GGG - chr5_3:26739547-26739566 Msa0806760:CDS 50.0%
GTCCATGATGTGTACTCGTG+GGG - chr5_3:26739548-26739567 Msa0806760:intron 50.0%
TGTACTCGTGGGGTGAATGT+GGG - chr5_3:26739558-26739577 Msa0806760:intron 50.0%
TATGTTGCAGAAGTCAGCGC+AGG - chr5_3:26739797-26739816 Msa0806760:CDS 50.0%
ATGTTGCAGAAGTCAGCGCA+GGG - chr5_3:26739798-26739817 Msa0806760:CDS 50.0%
CTTCGATCGGTGACGAAGTA+GGG + chr5_3:26739968-26739987 None:intergenic 50.0%
TCTTCGATCGGTGACGAAGT+AGG + chr5_3:26739969-26739988 None:intergenic 50.0%
AGTTGCAGAGGGAATTGAGC+AGG - chr5_3:26740187-26740206 Msa0806760:intron 50.0%
! GGAGGTGGTTGGATTTTCAC+AGG + chr5_3:26740971-26740990 None:intergenic 50.0%
AAAATCCAACCACCTCCAGC+TGG - chr5_3:26740974-26740993 Msa0806760:intron 50.0%
ACTGGTAGGATGAAGCCAGA+GGG + chr5_3:26741009-26741028 None:intergenic 50.0%
TGGCTTCATCCTACCAGTGT+CGG - chr5_3:26741011-26741030 Msa0806760:CDS 50.0%
!! AGGGGGCATTGCCATTCTTA+AGG - chr5_3:26741499-26741518 Msa0806760:intron 50.0%
TTGCAGGCAGCAATTGAGGA+AGG - chr5_3:26741782-26741801 Msa0806760:intron 50.0%
! GAGGAAGGTGTAGTAGTTGG+TGG - chr5_3:26741797-26741816 Msa0806760:intron 50.0%
!! GAAGGTGTAGTAGTTGGTGG+TGG - chr5_3:26741800-26741819 Msa0806760:intron 50.0%
TGCTGTTGTGATTGACCGCA+TGG - chr5_3:26742671-26742690 Msa0806760:CDS 50.0%
GGCTTTCTAGGCATAGCCAT+GGG + chr5_3:26742726-26742745 None:intergenic 50.0%
GGCATTCTAGGCATAGCCAT+GGG + chr5_3:26742747-26742766 None:intergenic 50.0%
GACTTAGTGGCAGAGCTGCT+TGG - chr5_3:26738503-26738522 Msa0806760:intron 55.0%
ACAACAAGTATGGGCCACCC+AGG - chr5_3:26738564-26738583 Msa0806760:CDS 55.0%
CGGTCCATGATGTGTACTCG+TGG - chr5_3:26739546-26739565 Msa0806760:CDS 55.0%
CACCCCACGAGTACACATCA+TGG + chr5_3:26739553-26739572 None:intergenic 55.0%
GTGTACTCGTGGGGTGAATG+TGG - chr5_3:26739557-26739576 Msa0806760:intron 55.0%
CTCTTGCGTTCCCCAAAAGC+AGG + chr5_3:26740278-26740297 None:intergenic 55.0%
GCATGGACGAGACAAGTGTG+AGG - chr5_3:26740757-26740776 Msa0806760:CDS 55.0%
CACTGGTAGGATGAAGCCAG+AGG + chr5_3:26741010-26741029 None:intergenic 55.0%
GGCTTCATCCTACCAGTGTC+GGG - chr5_3:26741012-26741031 Msa0806760:CDS 55.0%
GCTTCATCCTACCAGTGTCG+GGG - chr5_3:26741013-26741032 Msa0806760:CDS 55.0%
AAAGCCAGCACGGATGTGCT+TGG - chr5_3:26741201-26741220 Msa0806760:CDS 55.0%
AGAACCAAGCACATCCGTGC+TGG + chr5_3:26741208-26741227 None:intergenic 55.0%
GGGCTTTCTAGGCATAGCCA+TGG + chr5_3:26742727-26742746 None:intergenic 55.0%
GGCTATGCCTAGAAAGCCCA+TGG - chr5_3:26742728-26742747 Msa0806760:CDS 55.0%
GGCATAGCCATGGGCTTTCT+AGG + chr5_3:26742717-26742736 None:intergenic 55.0%
GGGCATTCTAGGCATAGCCA+TGG + chr5_3:26742748-26742767 None:intergenic 55.0%
! GTAGGCAGGGGTGGACTTAG+TGG - chr5_3:26738490-26738509 Msa0806760:intron 60.0%
AACCACCTCCAGCTGGACCA+GGG - chr5_3:26740981-26741000 Msa0806760:intron 60.0%
CTTTGCGGTGTAGGCAGGGG+TGG - chr5_3:26738481-26738500 Msa0806760:intron 65.0%
CTGGTCCAGCTGGAGGTGGT+TGG + chr5_3:26740982-26741001 None:intergenic 65.0%
CAACCACCTCCAGCTGGACC+AGG - chr5_3:26740980-26740999 Msa0806760:intron 65.0%
ACCACCTCCAGCTGGACCAG+GGG - chr5_3:26740982-26741001 Msa0806760:intron 65.0%
GATGAAGCCAGAGGGTCCCC+TGG + chr5_3:26741001-26741020 None:intergenic 65.0%
TCCCCTGGTCCAGCTGGAGG+TGG + chr5_3:26740986-26741005 None:intergenic 70.0%
AGAGGGTCCCCTGGTCCAGC+TGG + chr5_3:26740992-26741011 None:intergenic 70.0%
AGCTGGACCAGGGGACCCTC+TGG - chr5_3:26740991-26741010 Msa0806760:CDS 70.0%
TCGGTGGCCCCGACACTGGT+AGG + chr5_3:26741023-26741042 None:intergenic 70.0%
! TCACTCGGTGGCCCCGACAC+TGG + chr5_3:26741027-26741046 None:intergenic 70.0%
GGGTCCCCTGGTCCAGCTGG+AGG + chr5_3:26740989-26741008 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 26738122 26742887 26738122 ID=Msa0806760;Name=Msa0806760
chr5_3 mRNA 26738122 26742887 26738122 ID=Msa0806760-mRNA-1;Parent=Msa0806760;Name=Msa0806760-mRNA-1;_AED=0.08;_eAED=0.08;_QI=108|0.16|0.15|1|1|1|13|0|627
chr5_3 exon 26738122 26738397 26738122 ID=Msa0806760-mRNA-1:exon:9679;Parent=Msa0806760-mRNA-1
chr5_3 exon 26738510 26738602 26738510 ID=Msa0806760-mRNA-1:exon:9678;Parent=Msa0806760-mRNA-1
chr5_3 exon 26738719 26738811 26738719 ID=Msa0806760-mRNA-1:exon:9677;Parent=Msa0806760-mRNA-1
chr5_3 exon 26739117 26739221 26739117 ID=Msa0806760-mRNA-1:exon:9676;Parent=Msa0806760-mRNA-1
chr5_3 exon 26739302 26739373 26739302 ID=Msa0806760-mRNA-1:exon:9675;Parent=Msa0806760-mRNA-1
chr5_3 exon 26739489 26739566 26739489 ID=Msa0806760-mRNA-1:exon:9674;Parent=Msa0806760-mRNA-1
chr5_3 exon 26739677 26739846 26739677 ID=Msa0806760-mRNA-1:exon:9673;Parent=Msa0806760-mRNA-1
chr5_3 exon 26740677 26740911 26740677 ID=Msa0806760-mRNA-1:exon:9672;Parent=Msa0806760-mRNA-1
chr5_3 exon 26740991 26741233 26740991 ID=Msa0806760-mRNA-1:exon:9671;Parent=Msa0806760-mRNA-1
chr5_3 exon 26741625 26741720 26741625 ID=Msa0806760-mRNA-1:exon:9670;Parent=Msa0806760-mRNA-1
chr5_3 exon 26742010 26742147 26742010 ID=Msa0806760-mRNA-1:exon:9669;Parent=Msa0806760-mRNA-1
chr5_3 exon 26742390 26742515 26742390 ID=Msa0806760-mRNA-1:exon:9668;Parent=Msa0806760-mRNA-1
chr5_3 exon 26742621 26742887 26742621 ID=Msa0806760-mRNA-1:exon:9667;Parent=Msa0806760-mRNA-1
chr5_3 five_prime_UTR 26742780 26742887 26742780 ID=Msa0806760-mRNA-1:five_prime_utr;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26742621 26742779 26742621 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26742390 26742515 26742390 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26742010 26742147 26742010 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26741625 26741720 26741625 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26740991 26741233 26740991 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26740677 26740911 26740677 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26739677 26739846 26739677 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26739489 26739566 26739489 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26739302 26739373 26739302 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26739117 26739221 26739117 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26738719 26738811 26738719 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26738510 26738602 26738510 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
chr5_3 CDS 26738122 26738397 26738122 ID=Msa0806760-mRNA-1:cds;Parent=Msa0806760-mRNA-1
Gene Sequence

>Msa0806760

ATGACATCTTCTCCATCACCTATATCTGCTACATTATCATTTGCTAATCCATCATCAATTCCAAAACACCGAAATTCACCTTCTTTTTTATTAAACACAAAAGCTATGTCCAAAGATCTTTATTTCAACCATGATGGTTCAACCACAAAGAAGCTTCTTGCAGGGGTGGACTTAGTGGCAGAGCTGCTTGGTGTTACATTGGGTCCTAAGGGAAGAAATGTTGTGTTGCACAACAAGTATGGGCCACCCAGGATAGTAAATGATGGAGAAACTGTTCTCAAAGAGATTGAATTGGAAGATCCATTGGAGAATGTTGGGGTTAAATTGGTGAGACAAGCTGGTGCAAAAACCAATATCTTAGTTGGTGATGGCTCAACTACATCTGTTGTTCTTGCTCATGGCTTAATCAAAGAGGGAATGAAGGTTATTGCAGCTGGAATGAATCCTGTCCAAATTGCTCGTGGGATTGAGAAAACAGCAATAGCACTTGTTACTGAACTTAGTTTGATGTCTAGAGAAGTTGAGGATCATGAACTTAAATATGTTGCAGAAGTCAGCGCAGGGAACGATTATGTTGTCGGAAACATGATTTCTGAGGCTTTGCATAAAGTAGGAAGAAAAGGAGTAGTGACAATTGAAAAAGGCAAAAGCATTGAGAATAGTCTAGAGATTGTAGAAGGAATGCAATTCGATCGCGGTTATCTGTCTCCCTACTTCGTCACCGATCGAAGAAAGATGACAGTAGATCTTCACAACTGCAAGTTGCTTTTAGTTGACAAAAAGATCACAAATCCAAAAGAGCTTCTGAACATATTGAATAGTGCAGTGAAAGAGAAATTTCCAATTTTGATAGTTGCAGAGGGAATTGAGCAGGATGCTCTTGCTCCAATTATTAAAAATAAACTTAGGGGTGTGCTTAAGGTTGCTGCTATTAAGGCTCCTGCTTTTGGGGAACGCAAGAGTCACTACTTAGAAGATATTGCCATCTTGACTGGAGGTACTGTAATAAGAGAAGATATGGGTTTCACCTTAGAAAAAGCCAGCACGGATGTGCTTGGTTCTGCTGCCAAAGTTGTCATTACAAAAGATTCTACCCTACTAGTCACTGATGGGAGTACTAGAGAAGCAATTGAAAAGAGGGTTAATCAAATTAAGATCCTTGTTGAGAATACTGAAGAAAATTTTCAAAAGAAGATATTGAATGAAAGGATAGCAAGATTATCAGGGGGCATTGCCATTCTTAAGGTAGGAGCACAAACACAAGTAGAGTTGAAGGATAAACAATTAAGAATAGAAGATGCCTTAAATGCAACCAAGGCAGCAATTGAGGAAGGTGTAGTAGTTGGTGGTGGCTGTAGCCTTCTAAGACTATCCAAGAAGGTGGATAGCATAAAAATTCTCCTGGACAATGAAGAGCAAAAGATTGGAGCTGAAATCTTCAAAAGAGCTTTGAGCTATCCTACTAAAATGATAGCGAAAAATGCCGGTGTAAATGGCAATGTTGTCATAGATAAGGTTTTAGCAGATGATAACATGAATTTTGGTTACAATGCTGCTAGAGACTGTTATGAGGATCTCATGAAGGCTAGAATCATGGATCCAACAAAGGTTGTTAGGTGTTGTATAGAGCATGCAGCTTCTGTGGCAAAGACATTTCTAACATCAAATGCTGTTGTGATTGACCGCATGGAACTAGAACAACCATTACAACGTAGAAAGCCCATGGCTATGCCTAGAAAGCCCATGGCTATGCCTAGAATGCCCATGACTAATTCAGGTATTAGAGTGGGTAGTCATTTAAAAAATGTTTTATATATTACAATTGGCGCTAAAATAACAAGACGACGACAAAACAACAACAAAAAATGCCTTTTATATTACTAG

Protein sequence

>Msa0806760

MTSSPSPISATLSFANPSSIPKHRNSPSFLLNTKAMSKDLYFNHDGSTTKKLLAGVDLVAELLGVTLGPKGRNVVLHNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNILVGDGSTTSVVLAHGLIKEGMKVIAAGMNPVQIARGIEKTAIALVTELSLMSREVEDHELKYVAEVSAGNDYVVGNMISEALHKVGRKGVVTIEKGKSIENSLEIVEGMQFDRGYLSPYFVTDRRKMTVDLHNCKLLLVDKKITNPKELLNILNSAVKEKFPILIVAEGIEQDALAPIIKNKLRGVLKVAAIKAPAFGERKSHYLEDIAILTGGTVIREDMGFTLEKASTDVLGSAAKVVITKDSTLLVTDGSTREAIEKRVNQIKILVENTEENFQKKILNERIARLSGGIAILKVGAQTQVELKDKQLRIEDALNATKAAIEEGVVVGGGCSLLRLSKKVDSIKILLDNEEQKIGAEIFKRALSYPTKMIAKNAGVNGNVVIDKVLADDNMNFGYNAARDCYEDLMKARIMDPTKVVRCCIEHAASVAKTFLTSNAVVIDRMELEQPLQRRKPMAMPRKPMAMPRMPMTNSGIRVGSHLKNVLYITIGAKITRRRQNNNKKCLLYY*