Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159350 | XP_003624755.1 | 97.283 | 368 | 10 | 0 | 1 | 368 | 1 | 368 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159350 | sp|O22682|CYSK4_ARATH | 79.870 | 308 | 62 | 0 | 61 | 368 | 95 | 402 | 1.56e-169 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159350 | G7L2L5 | 97.283 | 368 | 10 | 0 | 1 | 368 | 1 | 368 | 0.0 | 730 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa1159350 | 0.837270 | 5.739473e-57 | -8.615850e-47 |
| Msa0003470 | Msa1159350 | 0.812567 | 3.973525e-51 | -8.615850e-47 |
| Msa0014910 | Msa1159350 | 0.802043 | 6.763662e-49 | -8.615850e-47 |
| Msa0017940 | Msa1159350 | 0.818882 | 1.554539e-52 | -8.615850e-47 |
| Msa0027540 | Msa1159350 | 0.831190 | 1.920893e-55 | -8.615850e-47 |
| Msa0030380 | Msa1159350 | 0.816072 | 6.675725e-52 | -8.615850e-47 |
| Msa0032120 | Msa1159350 | 0.811297 | 7.510822e-51 | -8.615850e-47 |
| Msa0032400 | Msa1159350 | 0.817614 | 3.009665e-52 | -8.615850e-47 |
| Msa0037820 | Msa1159350 | 0.807920 | 3.994003e-50 | -8.615850e-47 |
| Msa0044710 | Msa1159350 | 0.823111 | 1.651342e-53 | -8.615850e-47 |
| Msa0050580 | Msa1159350 | 0.836005 | 1.205736e-56 | -8.615850e-47 |
| Msa0050720 | Msa1159350 | 0.807895 | 4.041839e-50 | -8.615850e-47 |
| Msa0050770 | Msa1159350 | 0.802658 | 5.052868e-49 | -8.615850e-47 |
| Msa0075310 | Msa1159350 | 0.823138 | 1.627412e-53 | -8.615850e-47 |
| Msa0084680 | Msa1159350 | 0.838488 | 2.791528e-57 | -8.615850e-47 |
| Msa0091480 | Msa1159350 | 0.812281 | 4.587237e-51 | -8.615850e-47 |
| Msa0092660 | Msa1159350 | 0.803194 | 3.916376e-49 | -8.615850e-47 |
| Msa0092730 | Msa1159350 | 0.805357 | 1.387829e-49 | -8.615850e-47 |
| Msa0102900 | Msa1159350 | 0.836705 | 8.000591e-57 | -8.615850e-47 |
| Msa0605620 | Msa1159350 | 0.822038 | 2.932489e-53 | -8.615850e-47 |
| Msa0614230 | Msa1159350 | 0.801008 | 1.102576e-48 | -8.615850e-47 |
| Msa0618010 | Msa1159350 | 0.805364 | 1.383136e-49 | -8.615850e-47 |
| Msa0620110 | Msa1159350 | 0.807727 | 4.387957e-50 | -8.615850e-47 |
| Msa0621120 | Msa1159350 | 0.832116 | 1.135566e-55 | -8.615850e-47 |
| Msa0639370 | Msa1159350 | 0.835597 | 1.530036e-56 | -8.615850e-47 |
| Msa0642650 | Msa1159350 | 0.816623 | 5.026508e-52 | -8.615850e-47 |
| Msa0659890 | Msa1159350 | 0.805839 | 1.099649e-49 | -8.615850e-47 |
| Msa0661470 | Msa1159350 | 0.803373 | 3.596135e-49 | -8.615850e-47 |
| Msa0665790 | Msa1159350 | 0.829955 | 3.853217e-55 | -8.615850e-47 |
| Msa0667970 | Msa1159350 | 0.829532 | 4.883328e-55 | -8.615850e-47 |
| Msa0669220 | Msa1159350 | 0.838190 | 3.331729e-57 | -8.615850e-47 |
| Msa0681890 | Msa1159350 | 0.801622 | 8.253833e-49 | -8.615850e-47 |
| Msa0682460 | Msa1159350 | 0.832895 | 7.280807e-56 | -8.615850e-47 |
| Msa0688370 | Msa1159350 | 0.825491 | 4.554533e-54 | -8.615850e-47 |
| Msa0704220 | Msa1159350 | 0.829044 | 6.415930e-55 | -8.615850e-47 |
| Msa0706600 | Msa1159350 | 0.817769 | 2.777494e-52 | -8.615850e-47 |
| Msa0707780 | Msa1159350 | 0.801729 | 7.847920e-49 | -8.615850e-47 |
| Msa0727170 | Msa1159350 | 0.809122 | 2.211127e-50 | -8.615850e-47 |
| Msa0728280 | Msa1159350 | 0.823515 | 1.328860e-53 | -8.615850e-47 |
| Msa0728380 | Msa1159350 | 0.830404 | 2.993856e-55 | -8.615850e-47 |
| Msa0728540 | Msa1159350 | 0.834260 | 3.322697e-56 | -8.615850e-47 |
| Msa0729550 | Msa1159350 | 0.831245 | 1.862541e-55 | -8.615850e-47 |
| Msa0738880 | Msa1159350 | 0.807419 | 5.102064e-50 | -8.615850e-47 |
| Msa0769830 | Msa1159350 | 0.821350 | 4.231174e-53 | -8.615850e-47 |
| Msa0776220 | Msa1159350 | 0.803578 | 3.260094e-49 | -8.615850e-47 |
| Msa0776480 | Msa1159350 | 0.819179 | 1.330356e-52 | -8.615850e-47 |
| Msa0780140 | Msa1159350 | 0.811972 | 5.358864e-51 | -8.615850e-47 |
| Msa0783340 | Msa1159350 | 0.805101 | 1.570701e-49 | -8.615850e-47 |
| Msa0802210 | Msa1159350 | 0.808604 | 2.854395e-50 | -8.615850e-47 |
| Msa0803130 | Msa1159350 | 0.801621 | 8.260504e-49 | -8.615850e-47 |
| Msa0806720 | Msa1159350 | 0.831636 | 1.491791e-55 | -8.615850e-47 |
| Msa0806760 | Msa1159350 | 0.835100 | 2.042745e-56 | -8.615850e-47 |
| Msa0819370 | Msa1159350 | 0.809497 | 1.837963e-50 | -8.615850e-47 |
| Msa0824140 | Msa1159350 | 0.808347 | 3.238158e-50 | -8.615850e-47 |
| Msa0125440 | Msa1159350 | 0.800044 | 1.733451e-48 | -8.615850e-47 |
| Msa0135980 | Msa1159350 | 0.804603 | 1.995994e-49 | -8.615850e-47 |
| Msa0137600 | Msa1159350 | 0.802171 | 6.368072e-49 | -8.615850e-47 |
| Msa0140290 | Msa1159350 | 0.811031 | 8.577057e-51 | -8.615850e-47 |
| Msa0141830 | Msa1159350 | 0.830928 | 2.227697e-55 | -8.615850e-47 |
| Msa0155610 | Msa1159350 | 0.820213 | 7.724480e-53 | -8.615850e-47 |
| Msa0157350 | Msa1159350 | 0.808481 | 3.032658e-50 | -8.615850e-47 |
| Msa0168100 | Msa1159350 | 0.818102 | 2.335655e-52 | -8.615850e-47 |
| Msa0169620 | Msa1159350 | 0.813869 | 2.057314e-51 | -8.615850e-47 |
| Msa0171920 | Msa1159350 | 0.800009 | 1.761681e-48 | -8.615850e-47 |
| Msa0173740 | Msa1159350 | 0.816727 | 4.763394e-52 | -8.615850e-47 |
| Msa0173820 | Msa1159350 | 0.825882 | 3.678912e-54 | -8.615850e-47 |
| Msa0173830 | Msa1159350 | 0.833057 | 6.637410e-56 | -8.615850e-47 |
| Msa0177280 | Msa1159350 | 0.801907 | 7.213545e-49 | -8.615850e-47 |
| Msa0182930 | Msa1159350 | 0.837596 | 4.734173e-57 | -8.615850e-47 |
| Msa0185390 | Msa1159350 | 0.803556 | 3.295653e-49 | -8.615850e-47 |
| Msa0185700 | Msa1159350 | 0.821947 | 3.078324e-53 | -8.615850e-47 |
| Msa0223280 | Msa1159350 | 0.809235 | 2.092062e-50 | -8.615850e-47 |
| Msa0376510 | Msa1159350 | 0.806124 | 9.579890e-50 | -8.615850e-47 |
| Msa0378080 | Msa1159350 | 0.817607 | 3.021500e-52 | -8.615850e-47 |
| Msa0380650 | Msa1159350 | 0.803850 | 2.862637e-49 | -8.615850e-47 |
| Msa0388720 | Msa1159350 | 0.817302 | 3.539208e-52 | -8.615850e-47 |
| Msa0417630 | Msa1159350 | 0.802312 | 5.956656e-49 | -8.615850e-47 |
| Msa0418430 | Msa1159350 | 0.824326 | 8.576658e-54 | -8.615850e-47 |
| Msa0425050 | Msa1159350 | 0.823414 | 1.403269e-53 | -8.615850e-47 |
| Msa0430290 | Msa1159350 | 0.806591 | 7.636601e-50 | -8.615850e-47 |
| Msa0436090 | Msa1159350 | 0.800013 | 1.758360e-48 | -8.615850e-47 |
| Msa0467800 | Msa1159350 | 0.818631 | 1.772638e-52 | -8.615850e-47 |
| Msa0467880 | Msa1159350 | 0.816093 | 6.605591e-52 | -8.615850e-47 |
| Msa0468160 | Msa1159350 | 0.825330 | 4.972651e-54 | -8.615850e-47 |
| Msa0470180 | Msa1159350 | 0.809697 | 1.664612e-50 | -8.615850e-47 |
| Msa0472740 | Msa1159350 | 0.821503 | 3.901112e-53 | -8.615850e-47 |
| Msa0990520 | Msa1159350 | 0.804096 | 2.545577e-49 | -8.615850e-47 |
| Msa1002040 | Msa1159350 | 0.812550 | 4.007631e-51 | -8.615850e-47 |
| Msa1032300 | Msa1159350 | 0.816866 | 4.434024e-52 | -8.615850e-47 |
| Msa1072340 | Msa1159350 | 0.906925 | 8.811136e-81 | -8.615850e-47 |
| Msa1080840 | Msa1159350 | 0.803923 | 2.764274e-49 | -8.615850e-47 |
| Msa0246690 | Msa1159350 | 0.809934 | 1.480598e-50 | -8.615850e-47 |
| Msa0259980 | Msa1159350 | 0.815134 | 1.079810e-51 | -8.615850e-47 |
| Msa0265580 | Msa1159350 | 0.833929 | 4.019705e-56 | -8.615850e-47 |
| Msa0284780 | Msa1159350 | 0.805064 | 1.598680e-49 | -8.615850e-47 |
| Msa0298970 | Msa1159350 | 0.805337 | 1.401395e-49 | -8.615850e-47 |
| Msa0303440 | Msa1159350 | 0.821568 | 3.767490e-53 | -8.615850e-47 |
| Msa0317260 | Msa1159350 | 0.811302 | 7.494418e-51 | -8.615850e-47 |
| Msa0319970 | Msa1159350 | 0.809166 | 2.164108e-50 | -8.615850e-47 |
| Msa0323990 | Msa1159350 | 0.818567 | 1.832789e-52 | -8.615850e-47 |
| Msa0339860 | Msa1159350 | 0.820798 | 5.669586e-53 | -8.615850e-47 |
| Msa1118150 | Msa1159350 | 0.873088 | 1.926953e-67 | -8.615850e-47 |
| Msa1118980 | Msa1159350 | 0.804407 | 2.192215e-49 | -8.615850e-47 |
| Msa1159100 | Msa1159350 | 0.813517 | 2.458943e-51 | -8.615850e-47 |
| Msa1159350 | Msa1160570 | 0.809184 | 2.144788e-50 | -8.615850e-47 |
| Msa1159350 | Msa1171690 | 0.801850 | 7.413049e-49 | -8.615850e-47 |
| Msa1159350 | Msa1177240 | 0.880822 | 4.000097e-70 | -8.615850e-47 |
| Msa1159350 | Msa1188940 | 0.821528 | 3.848644e-53 | -8.615850e-47 |
| Msa1159350 | Msa1197110 | 0.806813 | 6.855052e-50 | -8.615850e-47 |
| Msa1159350 | Msa1223840 | 0.814097 | 1.832426e-51 | -8.615850e-47 |
| Msa1159350 | Msa1224670 | 0.819801 | 9.594978e-53 | -8.615850e-47 |
| Msa1159350 | Msa1243170 | 0.801810 | 7.553117e-49 | -8.615850e-47 |
| Msa1159350 | Msa1284520 | 0.830520 | 2.804234e-55 | -8.615850e-47 |
| Msa1159350 | Msa1306580 | 0.827957 | 1.174224e-54 | -8.615850e-47 |
| Msa1159350 | Msa1317030 | 0.892790 | 1.147119e-74 | -8.615850e-47 |
| Msa1159350 | Msa1324000 | 0.819426 | 1.168663e-52 | -8.615850e-47 |
| Msa1159350 | Msa1352290 | 0.802596 | 5.204819e-49 | -8.615850e-47 |
| Msa1159350 | Msa1365870 | 0.848995 | 4.295470e-60 | -8.615850e-47 |
| Msa1159350 | Msa1367600 | 0.803516 | 3.357881e-49 | -8.615850e-47 |
| Msa1159350 | Msa1375340 | 0.832367 | 9.843802e-56 | -8.615850e-47 |
| Msa1159350 | Msa1376640 | 0.801771 | 7.692967e-49 | -8.615850e-47 |
| Msa1159350 | Msa1381130 | 0.803091 | 4.113846e-49 | -8.615850e-47 |
| Msa1159350 | Msa1382310 | 0.834009 | 3.839937e-56 | -8.615850e-47 |
| Msa1159350 | Msa1398480 | 0.832330 | 1.005106e-55 | -8.615850e-47 |
| Msa1159350 | Msa1405770 | 0.801762 | 7.727056e-49 | -8.615850e-47 |
| Msa1159350 | Msa1419850 | 0.817501 | 3.192109e-52 | -8.615850e-47 |
| Msa1159350 | Msa1421870 | 0.820945 | 5.244775e-53 | -8.615850e-47 |
| Msa1159350 | Msa1427830 | 0.812013 | 5.248584e-51 | -8.615850e-47 |
| Msa1159350 | Msa1440610 | 0.801825 | 7.498395e-49 | -8.615850e-47 |
| Msa1159350 | Msa1447300 | 0.836782 | 7.648522e-57 | -8.615850e-47 |
| Msa1159350 | Msa1449600 | 0.804697 | 1.907367e-49 | -8.615850e-47 |
| Msa1159350 | Msa1449880 | 0.853219 | 2.760759e-61 | -8.615850e-47 |
| Msa1159350 | Msa1453620 | 0.828655 | 7.968855e-55 | -8.615850e-47 |
| Msa1159350 | Msa1454110 | 0.841138 | 5.698951e-58 | -8.615850e-47 |
| Msa1159350 | Msa1454790 | 0.821355 | 4.220019e-53 | -8.615850e-47 |
| Msa1159350 | Msa1460440 | 0.827117 | 1.867060e-54 | -8.615850e-47 |
| Msa0485280 | Msa1159350 | 0.800194 | 1.616109e-48 | -8.615850e-47 |
| Msa0506760 | Msa1159350 | 0.801274 | 9.730060e-49 | -8.615850e-47 |
| Msa0518040 | Msa1159350 | 0.819187 | 1.325094e-52 | -8.615850e-47 |
| Msa0522660 | Msa1159350 | 0.821114 | 4.796061e-53 | -8.615850e-47 |
| Msa0524090 | Msa1159350 | 0.801185 | 1.014297e-48 | -8.615850e-47 |
| Msa0524120 | Msa1159350 | 0.805136 | 1.544469e-49 | -8.615850e-47 |
| Msa0532840 | Msa1159350 | 0.824360 | 8.418635e-54 | -8.615850e-47 |
| Msa0533010 | Msa1159350 | 0.824221 | 9.079884e-54 | -8.615850e-47 |
| Msa0546380 | Msa1159350 | 0.807050 | 6.107772e-50 | -8.615850e-47 |
| Msa0546740 | Msa1159350 | 0.825501 | 4.528428e-54 | -8.615850e-47 |
| Msa0546840 | Msa1159350 | 0.828504 | 8.668167e-55 | -8.615850e-47 |
| Msa0561510 | Msa1159350 | 0.812801 | 3.531857e-51 | -8.615850e-47 |
| Msa0564930 | Msa1159350 | 0.800869 | 1.177027e-48 | -8.615850e-47 |
| Msa0576420 | Msa1159350 | 0.806519 | 7.907663e-50 | -8.615850e-47 |
| Msa0581460 | Msa1159350 | 0.818220 | 2.195906e-52 | -8.615850e-47 |
| Msa0583740 | Msa1159350 | 0.868070 | 8.579165e-66 | -8.615850e-47 |
| Msa0590680 | Msa1159350 | 0.823469 | 1.362061e-53 | -8.615850e-47 |
| Msa0848360 | Msa1159350 | 0.801364 | 9.325477e-49 | -8.615850e-47 |
| Msa0848760 | Msa1159350 | 0.831597 | 1.525674e-55 | -8.615850e-47 |
| Msa0852730 | Msa1159350 | 0.803172 | 3.956538e-49 | -8.615850e-47 |
| Msa0877420 | Msa1159350 | 0.803958 | 2.718644e-49 | -8.615850e-47 |
| Msa0880220 | Msa1159350 | 0.836903 | 7.121882e-57 | -8.615850e-47 |
| Msa0925160 | Msa1159350 | 0.830065 | 3.621210e-55 | -8.615850e-47 |
| Msa0945960 | Msa1159350 | 0.830287 | 3.197644e-55 | -8.615850e-47 |
| Msa0948260 | Msa1159350 | 0.809661 | 1.694992e-50 | -8.615850e-47 |
| Msa0950320 | Msa1159350 | 0.816997 | 4.143845e-52 | -8.615850e-47 |
| Msa0955260 | Msa1159350 | 0.824255 | 8.912035e-54 | -8.615850e-47 |
| Msa0958020 | Msa1159350 | 0.814384 | 1.583295e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159350 | MtrunA17_Chr7g0254401 | 97.283 | 368 | 10 | 0 | 1 | 368 | 1 | 368 | 0.0 | 730 |
| Msa1159350 | MtrunA17_Chr4g0045721 | 58.092 | 346 | 135 | 1 | 33 | 368 | 15 | 360 | 3.50e-150 | 428 |
| Msa1159350 | MtrunA17_Chr4g0045781 | 62.465 | 357 | 112 | 4 | 29 | 368 | 28 | 379 | 9.76e-144 | 412 |
| Msa1159350 | MtrunA17_Chr4g0045771 | 55.491 | 346 | 135 | 3 | 33 | 368 | 15 | 351 | 6.90e-140 | 401 |
| Msa1159350 | MtrunA17_Chr1g0191041 | 63.125 | 320 | 108 | 1 | 59 | 368 | 2 | 321 | 2.46e-133 | 384 |
| Msa1159350 | MtrunA17_Chr5g0394491 | 63.057 | 314 | 106 | 1 | 65 | 368 | 8 | 321 | 9.23e-133 | 382 |
| Msa1159350 | MtrunA17_Chr1g0205381 | 63.057 | 314 | 106 | 1 | 65 | 368 | 8 | 321 | 1.31e-131 | 379 |
| Msa1159350 | MtrunA17_Chr1g0191051 | 60.510 | 314 | 114 | 1 | 65 | 368 | 7 | 320 | 3.20e-128 | 370 |
| Msa1159350 | MtrunA17_Chr7g0248021 | 50.000 | 348 | 160 | 2 | 35 | 368 | 27 | 374 | 1.66e-119 | 350 |
| Msa1159350 | MtrunA17_Chr1g0191061 | 51.966 | 356 | 115 | 3 | 69 | 368 | 25 | 380 | 6.98e-109 | 323 |
| Msa1159350 | MtrunA17_Chr1g0191071 | 54.511 | 266 | 106 | 3 | 113 | 368 | 1 | 261 | 1.15e-77 | 239 |
| Msa1159350 | MtrunA17_Chr5g0446431 | 27.701 | 361 | 191 | 8 | 69 | 362 | 48 | 405 | 3.29e-32 | 125 |
| Msa1159350 | MtrunA17_Chr2g0310201 | 39.568 | 139 | 44 | 7 | 129 | 238 | 6 | 133 | 4.43e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159350 | AT3G03630.1 | 79.870 | 308 | 62 | 0 | 61 | 368 | 95 | 402 | 1.58e-170 | 481 |
| Msa1159350 | AT3G59760.3 | 65.312 | 320 | 101 | 1 | 59 | 368 | 107 | 426 | 9.27e-142 | 409 |
| Msa1159350 | AT3G59760.1 | 65.312 | 320 | 101 | 1 | 59 | 368 | 107 | 426 | 1.18e-141 | 409 |
| Msa1159350 | AT2G43750.1 | 64.062 | 320 | 105 | 1 | 59 | 368 | 69 | 388 | 1.89e-139 | 402 |
| Msa1159350 | AT2G43750.2 | 64.062 | 320 | 105 | 1 | 59 | 368 | 69 | 388 | 1.89e-139 | 402 |
| Msa1159350 | AT4G14880.5 | 63.091 | 317 | 107 | 1 | 62 | 368 | 2 | 318 | 3.90e-133 | 383 |
| Msa1159350 | AT4G14880.3 | 63.091 | 317 | 107 | 1 | 62 | 368 | 2 | 318 | 3.90e-133 | 383 |
| Msa1159350 | AT4G14880.4 | 63.091 | 317 | 107 | 1 | 62 | 368 | 2 | 318 | 3.90e-133 | 383 |
| Msa1159350 | AT4G14880.2 | 63.091 | 317 | 107 | 1 | 62 | 368 | 2 | 318 | 3.90e-133 | 383 |
| Msa1159350 | AT4G14880.1 | 63.091 | 317 | 107 | 1 | 62 | 368 | 2 | 318 | 3.90e-133 | 383 |
| Msa1159350 | AT3G59760.2 | 64.746 | 295 | 94 | 1 | 59 | 343 | 107 | 401 | 1.74e-125 | 368 |
| Msa1159350 | AT3G04940.1 | 58.491 | 318 | 122 | 1 | 61 | 368 | 4 | 321 | 2.73e-125 | 363 |
| Msa1159350 | AT3G04940.2 | 58.491 | 318 | 122 | 1 | 61 | 368 | 4 | 321 | 2.73e-125 | 363 |
| Msa1159350 | AT5G28020.2 | 56.604 | 318 | 128 | 1 | 61 | 368 | 3 | 320 | 4.47e-116 | 340 |
| Msa1159350 | AT5G28020.4 | 56.604 | 318 | 128 | 1 | 61 | 368 | 3 | 320 | 4.47e-116 | 340 |
| Msa1159350 | AT5G28020.1 | 56.604 | 318 | 128 | 1 | 61 | 368 | 3 | 320 | 4.47e-116 | 340 |
| Msa1159350 | AT5G28020.3 | 56.604 | 318 | 128 | 1 | 61 | 368 | 3 | 320 | 4.47e-116 | 340 |
| Msa1159350 | AT5G28020.6 | 56.604 | 318 | 128 | 1 | 61 | 368 | 3 | 320 | 4.47e-116 | 340 |
| Msa1159350 | AT3G61440.1 | 51.335 | 337 | 151 | 2 | 45 | 368 | 26 | 362 | 2.93e-115 | 340 |
| Msa1159350 | AT5G28030.1 | 57.233 | 318 | 126 | 1 | 61 | 368 | 3 | 320 | 2.98e-115 | 338 |
| Msa1159350 | AT5G28030.4 | 57.233 | 318 | 126 | 1 | 61 | 368 | 3 | 320 | 2.98e-115 | 338 |
| Msa1159350 | AT5G28030.5 | 57.233 | 318 | 126 | 1 | 61 | 368 | 3 | 320 | 2.98e-115 | 338 |
| Msa1159350 | AT5G28030.2 | 57.233 | 318 | 126 | 1 | 61 | 368 | 3 | 320 | 2.98e-115 | 338 |
| Msa1159350 | AT3G22460.1 | 57.895 | 266 | 82 | 2 | 113 | 368 | 1 | 246 | 9.48e-101 | 298 |
| Msa1159350 | AT3G61440.2 | 53.759 | 266 | 113 | 1 | 113 | 368 | 1 | 266 | 1.12e-94 | 284 |
| Msa1159350 | AT3G61440.4 | 49.826 | 287 | 131 | 2 | 45 | 318 | 26 | 312 | 1.10e-92 | 281 |
| Msa1159350 | AT3G22460.2 | 67.935 | 184 | 59 | 0 | 62 | 245 | 5 | 188 | 2.78e-90 | 269 |
| Msa1159350 | AT5G28030.3 | 54.183 | 251 | 105 | 1 | 61 | 301 | 3 | 253 | 1.23e-88 | 268 |
| Msa1159350 | AT3G61440.3 | 52.917 | 240 | 103 | 1 | 139 | 368 | 2 | 241 | 2.58e-82 | 251 |
| Msa1159350 | AT5G28020.5 | 52.564 | 234 | 101 | 1 | 145 | 368 | 1 | 234 | 3.25e-69 | 217 |
| Msa1159350 | AT1G55880.1 | 26.857 | 350 | 186 | 5 | 73 | 354 | 48 | 395 | 1.80e-31 | 123 |
| Msa1159350 | AT1G55880.2 | 29.661 | 236 | 124 | 3 | 73 | 267 | 48 | 282 | 4.36e-28 | 113 |
Find 119 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCACAACGTCTTACATTT+TGG | 0.121545 | 7_4:-48963473 | None:intergenic |
| TCTCTGAACTTCTTCATAAA+TGG | 0.189086 | 7_4:-48963036 | None:intergenic |
| GCAAGACGGCCTGAAAATTC+TGG | 0.224053 | 7_4:+48962279 | Msa1159350:CDS |
| AGTGGGTAATGTTGATTTAT+TGG | 0.244493 | 7_4:+48960568 | Msa1159350:CDS |
| GAATGTCATCGTCCACATTA+AGG | 0.253990 | 7_4:-48963078 | None:intergenic |
| CTGCACCAAATGTGCGTAAA+AGG | 0.266577 | 7_4:-48960249 | None:intergenic |
| GGACGATGACATTCGGAAAT+TGG | 0.285950 | 7_4:+48963087 | Msa1159350:three_prime_UTR |
| AGGTTTCATACCAAGCATTT+TGG | 0.299848 | 7_4:+48961326 | Msa1159350:intron |
| TATTAGGTTGGGATTTCTTC+AGG | 0.304951 | 7_4:+48962228 | Msa1159350:intron |
| AGCATTGGAAGAAGGATTAC+TGG | 0.317790 | 7_4:+48961857 | Msa1159350:CDS |
| GATTTATTGGTTGCTGCTAT+TGG | 0.320316 | 7_4:+48960581 | Msa1159350:CDS |
| AAACTACAGGGCCAGAGATA+TGG | 0.322753 | 7_4:+48960537 | Msa1159350:CDS |
| TATTGTTTAATTAGGTGGTT+GGG | 0.342626 | 7_4:+48961140 | Msa1159350:intron |
| ATGCGGAGAAGGGGCTGAAA+GGG | 0.349505 | 7_4:+48960287 | Msa1159350:CDS |
| AGCTGCCTTATGATTTGTTT+AGG | 0.354495 | 7_4:+48963140 | Msa1159350:three_prime_UTR |
| GGAACTGGCGGCACTATTAC+AGG | 0.362045 | 7_4:+48960602 | Msa1159350:CDS |
| TTGGTTGCTGCTATTGGAAC+TGG | 0.363826 | 7_4:+48960587 | Msa1159350:CDS |
| TGTTTCGACAGTTTGATAAC+AGG | 0.383372 | 7_4:+48960359 | Msa1159350:CDS |
| GACATCTTCGGCAATGTTAA+CGG | 0.386866 | 7_4:-48959575 | None:intergenic |
| CATACTGGTAAATGACAATA+TGG | 0.405062 | 7_4:+48963513 | Msa1159350:three_prime_UTR |
| ATGGTTAACAATGGAATCAT+TGG | 0.405519 | 7_4:+48963532 | Msa1159350:three_prime_UTR |
| AATGAAAAGAATAGAATGTA+AGG | 0.409927 | 7_4:-48963351 | None:intergenic |
| CGGAAATTGTTCGGCGGAAA+CGG | 0.412122 | 7_4:-48959495 | None:intergenic |
| CAACGTTGAAGCTATTGAAA+TGG | 0.413520 | 7_4:+48961824 | Msa1159350:CDS |
| AATGTCATCGTCCACATTAA+GGG | 0.419341 | 7_4:-48963077 | None:intergenic |
| TTGCATCATATGCATCCATT+TGG | 0.420397 | 7_4:+48963234 | Msa1159350:three_prime_UTR |
| AACTACAGGGCCAGAGATAT+GGG | 0.421851 | 7_4:+48960538 | Msa1159350:CDS |
| AATGAATGAATGCAGTTGAT+TGG | 0.422069 | 7_4:+48959748 | Msa1159350:intron |
| TGAACCTACAACTGGAAATA+CGG | 0.427191 | 7_4:+48960141 | Msa1159350:CDS |
| AATATTGAAGCGTTACATAC+TGG | 0.439310 | 7_4:+48963498 | Msa1159350:three_prime_UTR |
| GACACTTCTGCAAGGTTCCA+TGG | 0.445890 | 7_4:-48959842 | None:intergenic |
| TAGCGGTGGCGGAAATTGTT+CGG | 0.450144 | 7_4:-48959504 | None:intergenic |
| ATACTATTCATCTTTATGAC+TGG | 0.451979 | 7_4:-48963393 | None:intergenic |
| AGTCCCGTATTTCCAGTTGT+AGG | 0.463176 | 7_4:-48960145 | None:intergenic |
| AGAACCGTTAGTTGTCCAAA+TGG | 0.465938 | 7_4:-48963249 | None:intergenic |
| CTCTCAATATTAACAGAAGC+AGG | 0.470025 | 7_4:-48960220 | None:intergenic |
| AATGCGGAGAAGGGGCTGAA+AGG | 0.474410 | 7_4:+48960286 | Msa1159350:CDS |
| ATATTGTTTAATTAGGTGGT+TGG | 0.476644 | 7_4:+48961139 | Msa1159350:intron |
| ACTGTATCCTCCCATATCTC+TGG | 0.477450 | 7_4:-48960548 | None:intergenic |
| TACTATTCATCTTTATGACT+GGG | 0.480332 | 7_4:-48963392 | None:intergenic |
| CAGATCCACTTCGAAACTAC+AGG | 0.481457 | 7_4:+48960524 | Msa1159350:intron |
| GAGAGTGGAGCAATTTCTCC+GGG | 0.484537 | 7_4:+48959981 | Msa1159350:CDS |
| AACGGCGTCAAGTCCTTCTC+TGG | 0.489128 | 7_4:-48959557 | None:intergenic |
| ATTCTGCGTGCTGGTAATCT+AGG | 0.489540 | 7_4:+48963324 | Msa1159350:three_prime_UTR |
| AGAAGATTAGCATTGGAAGA+AGG | 0.503716 | 7_4:+48961849 | Msa1159350:CDS |
| ATTGTTTAATTAGGTGGTTG+GGG | 0.510652 | 7_4:+48961141 | Msa1159350:intron |
| TTAATGTGGACGATGACATT+CGG | 0.510916 | 7_4:+48963080 | Msa1159350:three_prime_UTR |
| AGATACCTCTCACCAAAACT+AGG | 0.512174 | 7_4:-48962993 | None:intergenic |
| AGAGAGTGGAGCAATTTCTC+CGG | 0.512757 | 7_4:+48959980 | Msa1159350:CDS |
| CTGTCGAAACATGTAAGCAT+TGG | 0.520384 | 7_4:-48960347 | None:intergenic |
| TGTCGAAACATGTAAGCATT+GGG | 0.521342 | 7_4:-48960346 | None:intergenic |
| GAGATTATACTTCTATCTGC+AGG | 0.521691 | 7_4:-48961169 | None:intergenic |
| GGAAATTGGAGCTGCTATCA+TGG | 0.521756 | 7_4:+48963101 | Msa1159350:three_prime_UTR |
| TTCGGCGGAAACGGATGTTA+CGG | 0.521778 | 7_4:-48959486 | None:intergenic |
| GCAGATAGAAGTATAATCTC+AGG | 0.522284 | 7_4:+48961172 | Msa1159350:CDS |
| AGATACCTAAACAAATCATA+AGG | 0.531325 | 7_4:-48963145 | None:intergenic |
| CATTTCAATAGCTTCAACGT+TGG | 0.535968 | 7_4:-48961823 | None:intergenic |
| AAGTACCTGAGTGACATCTT+CGG | 0.537012 | 7_4:-48959587 | None:intergenic |
| AATTAGAGTTTCCCTTAATG+TGG | 0.537014 | 7_4:+48963066 | Msa1159350:three_prime_UTR |
| CTTCATAAATGGAATTGAAG+AGG | 0.537562 | 7_4:-48963025 | None:intergenic |
| AATGGCAAGAAGATTAGCAT+TGG | 0.539989 | 7_4:+48961842 | Msa1159350:CDS |
| TTCATAAATGGAATTGAAGA+GGG | 0.542836 | 7_4:-48963024 | None:intergenic |
| GGCGGCACTATTACAGGCAC+GGG | 0.543505 | 7_4:+48960608 | Msa1159350:CDS |
| TGCGGAGAAGGGGCTGAAAG+GGG | 0.545130 | 7_4:+48960288 | Msa1159350:CDS |
| ACAACTGGAAATACGGGACT+TGG | 0.546776 | 7_4:+48960148 | Msa1159350:CDS |
| CTGCTTCTGTTAATATTGAG+AGG | 0.547745 | 7_4:+48960221 | Msa1159350:CDS |
| AGTGGAAACTGTAGCGGTGG+CGG | 0.553063 | 7_4:-48959515 | None:intergenic |
| TGCTGCAAAACTTGAATCCA+TGG | 0.553303 | 7_4:+48959825 | Msa1159350:CDS |
| TCAATAATCCTATAAAACAT+TGG | 0.553995 | 7_4:-48963417 | None:intergenic |
| TGGAGCAATTTCTCCGGGGA+AGG | 0.557633 | 7_4:+48959986 | Msa1159350:CDS |
| GAACCTACAACTGGAAATAC+GGG | 0.559847 | 7_4:+48960142 | Msa1159350:CDS |
| AAAGGAGGAAGAATTGTTGT+GGG | 0.562018 | 7_4:-48959439 | None:intergenic |
| CTTGCAGAAGTGTCAAGGAT+AGG | 0.564739 | 7_4:+48959851 | Msa1159350:CDS |
| CAAAGGAGGAAGAATTGTTG+TGG | 0.564916 | 7_4:-48959440 | None:intergenic |
| CCTTCACAACATACCTTCCC+CGG | 0.566206 | 7_4:-48959999 | None:intergenic |
| GCATCCATTTGGACAACTAA+CGG | 0.566499 | 7_4:+48963245 | Msa1159350:three_prime_UTR |
| TTTACGCACATTTGGTGCAG+AGG | 0.570954 | 7_4:+48960252 | Msa1159350:CDS |
| ATAATCTCAGGAGACAATCC+AGG | 0.573091 | 7_4:+48961184 | Msa1159350:CDS |
| AGTTTGATATCCAAAATGCT+TGG | 0.575054 | 7_4:-48961336 | None:intergenic |
| GTTTAATTAGGTGGTTGGGG+TGG | 0.575507 | 7_4:+48961144 | Msa1159350:intron |
| TATCTGAATAAAGTTACAGA+TGG | 0.581662 | 7_4:+48959787 | Msa1159350:CDS |
| AATGACAATATGGTTAACAA+TGG | 0.588312 | 7_4:+48963523 | Msa1159350:three_prime_UTR |
| CGGTGGAATTGAGTAGTGAA+AGG | 0.596011 | 7_4:-48959466 | None:intergenic |
| ATGAAAAGAATAGAATGTAA+GGG | 0.600139 | 7_4:-48963350 | None:intergenic |
| GTACAATGTATTCTGCGTGC+TGG | 0.601584 | 7_4:+48963315 | Msa1159350:three_prime_UTR |
| TGGCGGCACTATTACAGGCA+CGG | 0.602529 | 7_4:+48960607 | Msa1159350:CDS |
| ACTTTATTCAGATATATCAT+CGG | 0.603173 | 7_4:-48959778 | None:intergenic |
| CTATCCTTGACACTTCTGCA+AGG | 0.605345 | 7_4:-48959850 | None:intergenic |
| AGTTCACACTTGATACAGAA+GGG | 0.605804 | 7_4:+48963280 | Msa1159350:three_prime_UTR |
| GGAACCTTGCAGAAGTGTCA+AGG | 0.610247 | 7_4:+48959846 | Msa1159350:CDS |
| CTGGCCCTGTAGTTTCGAAG+TGG | 0.612111 | 7_4:-48960529 | None:intergenic |
| TCGTTGCGGCAACAAAAGCA+AGG | 0.615870 | 7_4:-48960171 | None:intergenic |
| CGGAGTGGAAACTGTAGCGG+TGG | 0.620899 | 7_4:-48959518 | None:intergenic |
| GGCGTCAAGTCCTTCTCTGG+TGG | 0.626862 | 7_4:-48959554 | None:intergenic |
| GGAGGAAGAATTGTTGTGGG+AGG | 0.628772 | 7_4:-48959436 | None:intergenic |
| GAGTTCACACTTGATACAGA+AGG | 0.632289 | 7_4:+48963279 | Msa1159350:three_prime_UTR |
| AAACATGTAAGCATTGGGTG+TGG | 0.635335 | 7_4:-48960341 | None:intergenic |
| AGAGATATGGGAGGATACAG+TGG | 0.637198 | 7_4:+48960550 | Msa1159350:CDS |
| GAGATATGGGAGGATACAGT+GGG | 0.637320 | 7_4:+48960551 | Msa1159350:CDS |
| GGTAGAGAAAAGTGACGGAG+TGG | 0.638202 | 7_4:-48959533 | None:intergenic |
| ACTATTCATCTTTATGACTG+GGG | 0.641125 | 7_4:-48963391 | None:intergenic |
| ACTGCTTGATGAAGTCGTCA+AGG | 0.643890 | 7_4:+48961356 | Msa1159350:CDS |
| GTAGTGAAAGGACGCAAAGG+AGG | 0.644048 | 7_4:-48959454 | None:intergenic |
| TTAGCTGATGCTGAAGAGAG+TGG | 0.644083 | 7_4:+48959966 | Msa1159350:CDS |
| CAGTTTATAACCCTTCGTTG+CGG | 0.649465 | 7_4:-48960185 | None:intergenic |
| CATTGCCGAAGATGTCACTC+AGG | 0.650049 | 7_4:+48959582 | Msa1159350:CDS |
| AGATCCACTTCGAAACTACA+GGG | 0.653448 | 7_4:+48960525 | Msa1159350:intron |
| TGAGTAGTGAAAGGACGCAA+AGG | 0.657845 | 7_4:-48959457 | None:intergenic |
| CTGCGATAACTTTAGCAAGA+CGG | 0.659607 | 7_4:+48962265 | Msa1159350:CDS |
| AAATTCTGGAAAACTTATAG+CGG | 0.664780 | 7_4:+48962293 | Msa1159350:CDS |
| GTTCACACTTGATACAGAAG+GGG | 0.675947 | 7_4:+48963281 | Msa1159350:three_prime_UTR |
| TGACGGAGTGGAAACTGTAG+CGG | 0.676115 | 7_4:-48959521 | None:intergenic |
| CTGGTGGTAGAGAAAAGTGA+CGG | 0.681959 | 7_4:-48959538 | None:intergenic |
| GGCGGAAACGGATGTTACGG+TGG | 0.687677 | 7_4:-48959483 | None:intergenic |
| GTTGCTGCTATTGGAACTGG+CGG | 0.697744 | 7_4:+48960590 | Msa1159350:CDS |
| TGATAACAGGAATAACACAA+AGG | 0.697943 | 7_4:+48960372 | Msa1159350:CDS |
| CGGTGGCGGAAATTGTTCGG+CGG | 0.722964 | 7_4:-48959501 | None:intergenic |
| TACAGGGCCAGAGATATGGG+AGG | 0.730792 | 7_4:+48960541 | Msa1159350:CDS |
| AGAGTGGAGCAATTTCTCCG+GGG | 0.772818 | 7_4:+48959982 | Msa1159350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACAAATGAATAAAAAAA+AGG | - | chr7_4:48959905-48959924 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAACCAAAATAT+TGG | - | chr7_4:48961957-48961976 | None:intergenic | 10.0% |
| !!! | TTTGGTTTTTTTTTTTTTTT+TGG | + | chr7_4:48961961-48961980 | Msa1159350:intron | 10.0% |
| !!! | TGTTTTTTCAAAAAAATATT+AGG | + | chr7_4:48962212-48962231 | Msa1159350:intron | 10.0% |
| !!! | GTAATATTTTTTTAAAGCTT+AGG | + | chr7_4:48960059-48960078 | Msa1159350:intron | 15.0% |
| !!! | ATACCATAAAATTTAAAACA+CGG | - | chr7_4:48960443-48960462 | None:intergenic | 15.0% |
| !! | AATGATGAACAAAAAAATAA+AGG | + | chr7_4:48960643-48960662 | Msa1159350:CDS | 15.0% |
| !! | AAATTGAATCATATACTTAT+TGG | + | chr7_4:48960701-48960720 | Msa1159350:intron | 15.0% |
| !!! | AATTTCTTTTAATACCAATA+AGG | - | chr7_4:48960782-48960801 | None:intergenic | 15.0% |
| !! | TTGTCATATATTGTTTAATT+AGG | + | chr7_4:48961132-48961151 | Msa1159350:intron | 15.0% |
| !!! | TGAAGTTAAAATTTTATTTC+TGG | + | chr7_4:48961409-48961428 | Msa1159350:intron | 15.0% |
| !! | TCATAATTTAATGAAGATTA+TGG | + | chr7_4:48961921-48961940 | Msa1159350:intron | 15.0% |
| !! | CATAATTTAATGAAGATTAT+GGG | + | chr7_4:48961922-48961941 | Msa1159350:intron | 15.0% |
| !!! | TAGGTTTTTTTATTTTTTGA+GGG | + | chr7_4:48962020-48962039 | Msa1159350:intron | 15.0% |
| !!! | TTTTCAAAAAAATATTAGGT+TGG | + | chr7_4:48962216-48962235 | Msa1159350:intron | 15.0% |
| !! | TTTCAAAAAAATATTAGGTT+GGG | + | chr7_4:48962217-48962236 | Msa1159350:intron | 15.0% |
| !!! | TTCTTAATGAAATATCTTTT+GGG | + | chr7_4:48962694-48962713 | Msa1159350:intron | 15.0% |
| !!! | ATCATATACATTTGAAATGT+TGG | + | chr7_4:48959710-48959729 | Msa1159350:intron | 20.0% |
| !! | ACTTTATTCAGATATATCAT+CGG | - | chr7_4:48959781-48959800 | None:intergenic | 20.0% |
| !!! | TTTTTTTAAAGCTTAGGTTA+CGG | + | chr7_4:48960065-48960084 | Msa1159350:intron | 20.0% |
| !! | AATAACATAATGCATATCAA+AGG | - | chr7_4:48960679-48960698 | None:intergenic | 20.0% |
| !! | ATATGACAAAATTTAATGCT+AGG | - | chr7_4:48961121-48961140 | None:intergenic | 20.0% |
| !! | TCATATATTGTTTAATTAGG+TGG | + | chr7_4:48961135-48961154 | Msa1159350:intron | 20.0% |
| !!! | TTTTTGCTTATAATAATGAC+CGG | + | chr7_4:48961624-48961643 | Msa1159350:intron | 20.0% |
| !!! | ATCTTTTGTCTTAATTATTG+AGG | + | chr7_4:48961747-48961766 | Msa1159350:intron | 20.0% |
| !!! | TTTTACATATAAACTGAAGT+AGG | + | chr7_4:48962001-48962020 | Msa1159350:intron | 20.0% |
| !!! | GTAGGTTTTTTTATTTTTTG+AGG | + | chr7_4:48962019-48962038 | Msa1159350:intron | 20.0% |
| !! | AAATACAAAACTAATGATGA+AGG | - | chr7_4:48962123-48962142 | None:intergenic | 20.0% |
| !!! | AAGAAAGGCAAAATATTTTA+AGG | - | chr7_4:48962329-48962348 | None:intergenic | 20.0% |
| !! | TTGAAAACAACAAAAAAGAA+AGG | - | chr7_4:48962344-48962363 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTGTTGTTTTCAA+TGG | + | chr7_4:48962344-48962363 | Msa1159350:intron | 20.0% |
| !!! | GTTACTTTTAATGTTGATAT+TGG | + | chr7_4:48962402-48962421 | Msa1159350:intron | 20.0% |
| !!! | GTTCTTAATGAAATATCTTT+TGG | + | chr7_4:48962693-48962712 | Msa1159350:intron | 20.0% |
| !! | TTCAAATTTGCAAAATAAGA+GGG | - | chr7_4:48962963-48962982 | None:intergenic | 20.0% |
| !! | ATGAAAAGAATAGAATGTAA+GGG | - | chr7_4:48963353-48963372 | None:intergenic | 20.0% |
| !! | AATGAAAAGAATAGAATGTA+AGG | - | chr7_4:48963354-48963373 | None:intergenic | 20.0% |
| !!! | ATAGTATTCCAATGTTTTAT+AGG | + | chr7_4:48963409-48963428 | Msa1159350:three_prime_UTR | 20.0% |
| !! | TCAATAATCCTATAAAACAT+TGG | - | chr7_4:48963420-48963439 | None:intergenic | 20.0% |
| ! | TATCTGAATAAAGTTACAGA+TGG | + | chr7_4:48959787-48959806 | Msa1159350:CDS | 25.0% |
| !! | ACTGTTTAAAATGTCAGAAT+TGG | + | chr7_4:48959933-48959952 | Msa1159350:intron | 25.0% |
| ! | TTAAAACACGGTGATTAAAA+AGG | - | chr7_4:48960431-48960450 | None:intergenic | 25.0% |
| !!! | TCACCGTGTTTTAAATTTTA+TGG | + | chr7_4:48960437-48960456 | Msa1159350:intron | 25.0% |
| !! | TTTTAATACCAATAAGGTGA+AGG | - | chr7_4:48960776-48960795 | None:intergenic | 25.0% |
| ! | GAAATCTATTACACAAGTTA+TGG | - | chr7_4:48960832-48960851 | None:intergenic | 25.0% |
| ! | TTTCTCATATTTATTGCTTG+AGG | + | chr7_4:48960848-48960867 | Msa1159350:intron | 25.0% |
| ! | AAAACATTCTGGTCAATTTA+TGG | - | chr7_4:48960982-48961001 | None:intergenic | 25.0% |
| !! | TTACATTTAAAGTGAAAGTC+TGG | + | chr7_4:48961072-48961091 | Msa1159350:intron | 25.0% |
| ! | TGAGGACAATAAAATAGATA+AGG | - | chr7_4:48961098-48961117 | None:intergenic | 25.0% |
| ! | ATATTGTTTAATTAGGTGGT+TGG | + | chr7_4:48961139-48961158 | Msa1159350:intron | 25.0% |
| ! | TATTGTTTAATTAGGTGGTT+GGG | + | chr7_4:48961140-48961159 | Msa1159350:intron | 25.0% |
| !!! | ATTTTAACTTCACAACAGAA+GGG | - | chr7_4:48961401-48961420 | None:intergenic | 25.0% |
| !!! | AATTTTAACTTCACAACAGA+AGG | - | chr7_4:48961402-48961421 | None:intergenic | 25.0% |
| !!! | TCATTATTTTAGCTGATACT+TGG | + | chr7_4:48961469-48961488 | Msa1159350:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr7_4:48961515-48961534 | None:intergenic | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | + | chr7_4:48961550-48961569 | Msa1159350:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr7_4:48961550-48961569 | None:intergenic | 25.0% |
| ! | CTTTGCATGATAAATTATCT+TGG | + | chr7_4:48961781-48961800 | Msa1159350:intron | 25.0% |
| !!! | TATCCGCATTTAGTTTTATT+TGG | + | chr7_4:48962056-48962075 | Msa1159350:intron | 25.0% |
| ! | ACACCAAATAAAACTAAATG+CGG | - | chr7_4:48962062-48962081 | None:intergenic | 25.0% |
| !! | ATAAGTTTTCCAGAATTTTC+AGG | - | chr7_4:48962291-48962310 | None:intergenic | 25.0% |
| !! | AAATTCTGGAAAACTTATAG+CGG | + | chr7_4:48962293-48962312 | Msa1159350:CDS | 25.0% |
| !! | ACTTTTAATGTTGATATTGG+TGG | + | chr7_4:48962405-48962424 | Msa1159350:intron | 25.0% |
| !!! | TTTTTTTTCTAGTAGCAAAC+AGG | + | chr7_4:48962450-48962469 | Msa1159350:intron | 25.0% |
| ! | ATACAGAAAACCATATATCT+AGG | - | chr7_4:48962483-48962502 | None:intergenic | 25.0% |
| ! | TCAAATTTGCAAAATAAGAG+GGG | - | chr7_4:48962962-48962981 | None:intergenic | 25.0% |
| ! | CTTCAAATTTGCAAAATAAG+AGG | - | chr7_4:48962964-48962983 | None:intergenic | 25.0% |
| !!! | CTCTTATTTTGCAAATTTGA+AGG | + | chr7_4:48962962-48962981 | Msa1159350:intron | 25.0% |
| !!! | AAGGTTATTTTTCCTAGTTT+TGG | + | chr7_4:48962981-48963000 | Msa1159350:intron | 25.0% |
| ! | TTCATAAATGGAATTGAAGA+GGG | - | chr7_4:48963027-48963046 | None:intergenic | 25.0% |
| ! | AGATACCTAAACAAATCATA+AGG | - | chr7_4:48963148-48963167 | None:intergenic | 25.0% |
| ! | TACTATTCATCTTTATGACT+GGG | - | chr7_4:48963395-48963414 | None:intergenic | 25.0% |
| ! | ATACTATTCATCTTTATGAC+TGG | - | chr7_4:48963396-48963415 | None:intergenic | 25.0% |
| ! | AATGACAATATGGTTAACAA+TGG | + | chr7_4:48963523-48963542 | Msa1159350:three_prime_UTR | 25.0% |
| AATGAATGAATGCAGTTGAT+TGG | + | chr7_4:48959748-48959767 | Msa1159350:intron | 30.0% | |
| TGATAACAGGAATAACACAA+AGG | + | chr7_4:48960372-48960391 | Msa1159350:CDS | 30.0% | |
| !! | AGTGGGTAATGTTGATTTAT+TGG | + | chr7_4:48960568-48960587 | Msa1159350:CDS | 30.0% |
| GGTTATGGAATTTGAATTCA+TGG | - | chr7_4:48960755-48960774 | None:intergenic | 30.0% | |
| TATTTATTGCTTGAGGAACT+TGG | + | chr7_4:48960855-48960874 | Msa1159350:intron | 30.0% | |
| !!! | TTTTTTTCCTTTGCTAACAC+AGG | - | chr7_4:48960898-48960917 | None:intergenic | 30.0% |
| GTGTTAGCAAAGGAAAAAAA+AGG | + | chr7_4:48960898-48960917 | Msa1159350:intron | 30.0% | |
| GCTAGAATAAGCTATACTAA+TGG | - | chr7_4:48960944-48960963 | None:intergenic | 30.0% | |
| CAAGTCTTACTAAAACATTC+TGG | - | chr7_4:48960993-48961012 | None:intergenic | 30.0% | |
| ACAAAATTTAATGCTAGGTG+AGG | - | chr7_4:48961116-48961135 | None:intergenic | 30.0% | |
| ATTGTTTAATTAGGTGGTTG+GGG | + | chr7_4:48961141-48961160 | Msa1159350:intron | 30.0% | |
| TATCGTAAAAGATTCATACC+TGG | - | chr7_4:48961205-48961224 | None:intergenic | 30.0% | |
| ATAAGAAAATCTGTTTCAGG+TGG | - | chr7_4:48961275-48961294 | None:intergenic | 30.0% | |
| CTGATAAGAAAATCTGTTTC+AGG | - | chr7_4:48961278-48961297 | None:intergenic | 30.0% | |
| AGTTTGATATCCAAAATGCT+TGG | - | chr7_4:48961339-48961358 | None:intergenic | 30.0% | |
| !!! | TTTTAACTTCACAACAGAAG+GGG | - | chr7_4:48961400-48961419 | None:intergenic | 30.0% |
| TAGTTATTTAATCGTTGCAC+TGG | + | chr7_4:48961682-48961701 | Msa1159350:intron | 30.0% | |
| ATCTTGGCATATGAAATTAC+AGG | + | chr7_4:48961797-48961816 | Msa1159350:intron | 30.0% | |
| ! | GGCTAAGTTTTCCAATATTT+TGG | + | chr7_4:48961943-48961962 | Msa1159350:intron | 30.0% |
| AGAAGTGGCAAATGATAATA+AGG | + | chr7_4:48962752-48962771 | Msa1159350:intron | 30.0% | |
| GCAAATGATAATAAGGTGAA+TGG | + | chr7_4:48962759-48962778 | Msa1159350:intron | 30.0% | |
| TAGGCTATAAGCTAATTATG+GGG | - | chr7_4:48962826-48962845 | None:intergenic | 30.0% | |
| CTAGGCTATAAGCTAATTAT+GGG | - | chr7_4:48962827-48962846 | None:intergenic | 30.0% | |
| ! | CATAATTAGCTTATAGCCTA+GGG | + | chr7_4:48962826-48962845 | Msa1159350:intron | 30.0% |
| CTTCATAAATGGAATTGAAG+AGG | - | chr7_4:48963028-48963047 | None:intergenic | 30.0% | |
| TCTCTGAACTTCTTCATAAA+TGG | - | chr7_4:48963039-48963058 | None:intergenic | 30.0% | |
| AATTAGAGTTTCCCTTAATG+TGG | + | chr7_4:48963066-48963085 | Msa1159350:three_prime_UTR | 30.0% | |
| ACTATTCATCTTTATGACTG+GGG | - | chr7_4:48963394-48963413 | None:intergenic | 30.0% | |
| ! | AATATTGAAGCGTTACATAC+TGG | + | chr7_4:48963498-48963517 | Msa1159350:three_prime_UTR | 30.0% |
| CATACTGGTAAATGACAATA+TGG | + | chr7_4:48963513-48963532 | Msa1159350:three_prime_UTR | 30.0% | |
| AAAGGAGGAAGAATTGTTGT+GGG | - | chr7_4:48959442-48959461 | None:intergenic | 35.0% | |
| ! | GTATGTTGTGAAGGATTTTG+TGG | + | chr7_4:48960008-48960027 | Msa1159350:intron | 35.0% |
| !!! | GTTTTAGTTGAACCTACAAC+TGG | + | chr7_4:48960133-48960152 | Msa1159350:CDS | 35.0% |
| TGAACCTACAACTGGAAATA+CGG | + | chr7_4:48960141-48960160 | Msa1159350:CDS | 35.0% | |
| CTCTCAATATTAACAGAAGC+AGG | - | chr7_4:48960223-48960242 | None:intergenic | 35.0% | |
| CTGCTTCTGTTAATATTGAG+AGG | + | chr7_4:48960221-48960240 | Msa1159350:CDS | 35.0% | |
| ! | AGAATCCTTTTACGCACATT+TGG | + | chr7_4:48960244-48960263 | Msa1159350:CDS | 35.0% |
| TGTCGAAACATGTAAGCATT+GGG | - | chr7_4:48960349-48960368 | None:intergenic | 35.0% | |
| ! | TGTTTCGACAGTTTGATAAC+AGG | + | chr7_4:48960359-48960378 | Msa1159350:CDS | 35.0% |
| ! | GATTTATTGGTTGCTGCTAT+TGG | + | chr7_4:48960581-48960600 | Msa1159350:CDS | 35.0% |
| GACACCTAATTCTCTATATC+AGG | + | chr7_4:48960729-48960748 | Msa1159350:intron | 35.0% | |
| ATGGCCTGATATAGAGAATT+AGG | - | chr7_4:48960736-48960755 | None:intergenic | 35.0% | |
| TTCCATAACCTTCACCTTAT+TGG | + | chr7_4:48960765-48960784 | Msa1159350:intron | 35.0% | |
| TACCAATAAGGTGAAGGTTA+TGG | - | chr7_4:48960770-48960789 | None:intergenic | 35.0% | |
| TTGTATTCCTGTGTTAGCAA+AGG | + | chr7_4:48960888-48960907 | Msa1159350:intron | 35.0% | |
| AGGAAAAAAAAGGATCCGAA+AGG | + | chr7_4:48960908-48960927 | Msa1159350:intron | 35.0% | |
| AAAAAAAGGATCCGAAAGGA+AGG | + | chr7_4:48960912-48960931 | Msa1159350:intron | 35.0% | |
| GAGATTATACTTCTATCTGC+AGG | - | chr7_4:48961172-48961191 | None:intergenic | 35.0% | |
| ! | GCAGATAGAAGTATAATCTC+AGG | + | chr7_4:48961172-48961191 | Msa1159350:CDS | 35.0% |
| ! | TTATCAGCTGTTGACTGTAT+TGG | + | chr7_4:48961291-48961310 | Msa1159350:intron | 35.0% |
| ! | TATCAGCTGTTGACTGTATT+GGG | + | chr7_4:48961292-48961311 | Msa1159350:intron | 35.0% |
| ! | AGGTTTCATACCAAGCATTT+TGG | + | chr7_4:48961326-48961345 | Msa1159350:intron | 35.0% |
| AAACAAGAATAAGCCCTAAC+AGG | - | chr7_4:48961444-48961463 | None:intergenic | 35.0% | |
| TTGCTTATAATAATGACCGG+AGG | + | chr7_4:48961627-48961646 | Msa1159350:intron | 35.0% | |
| TGCTTATAATAATGACCGGA+GGG | + | chr7_4:48961628-48961647 | Msa1159350:intron | 35.0% | |
| AGTAAAACATATACACCCTC+CGG | - | chr7_4:48961646-48961665 | None:intergenic | 35.0% | |
| TTATTTAATCGTTGCACTGG+TGG | + | chr7_4:48961685-48961704 | Msa1159350:intron | 35.0% | |
| CATTTCAATAGCTTCAACGT+TGG | - | chr7_4:48961826-48961845 | None:intergenic | 35.0% | |
| CAACGTTGAAGCTATTGAAA+TGG | + | chr7_4:48961824-48961843 | Msa1159350:CDS | 35.0% | |
| AATGGCAAGAAGATTAGCAT+TGG | + | chr7_4:48961842-48961861 | Msa1159350:CDS | 35.0% | |
| ! | AGAAGATTAGCATTGGAAGA+AGG | + | chr7_4:48961849-48961868 | Msa1159350:CDS | 35.0% |
| !! | TATTAGGTTGGGATTTCTTC+AGG | + | chr7_4:48962228-48962247 | Msa1159350:intron | 35.0% |
| ATTATACACACACATTGCAC+AGG | - | chr7_4:48962376-48962395 | None:intergenic | 35.0% | |
| ATGATGATTTGAGTGCAAAC+AGG | - | chr7_4:48962572-48962591 | None:intergenic | 35.0% | |
| TTGCACTCAAATCATCATCT+TGG | + | chr7_4:48962574-48962593 | Msa1159350:intron | 35.0% | |
| ! | TCTTGGTAATCTTATCGTCT+TGG | + | chr7_4:48962591-48962610 | Msa1159350:intron | 35.0% |
| TCGTCTTGGTAAGATCATTA+TGG | + | chr7_4:48962605-48962624 | Msa1159350:intron | 35.0% | |
| !!! | TTTTGGGTTTAGATGAAGAG+TGG | + | chr7_4:48962710-48962729 | Msa1159350:intron | 35.0% |
| CCTAGGCTATAAGCTAATTA+TGG | - | chr7_4:48962828-48962847 | None:intergenic | 35.0% | |
| ! | CCATAATTAGCTTATAGCCT+AGG | + | chr7_4:48962825-48962844 | Msa1159350:intron | 35.0% |
| AGTGTCAGCATTATGAACAT+GGG | - | chr7_4:48962934-48962953 | None:intergenic | 35.0% | |
| AAGTGTCAGCATTATGAACA+TGG | - | chr7_4:48962935-48962954 | None:intergenic | 35.0% | |
| ATTTGCAAAATAAGAGGGGA+AGG | - | chr7_4:48962958-48962977 | None:intergenic | 35.0% | |
| !!! | TTTTTCCTAGTTTTGGTGAG+AGG | + | chr7_4:48962988-48963007 | Msa1159350:CDS | 35.0% |
| AATGTCATCGTCCACATTAA+GGG | - | chr7_4:48963080-48963099 | None:intergenic | 35.0% | |
| TTAATGTGGACGATGACATT+CGG | + | chr7_4:48963080-48963099 | Msa1159350:three_prime_UTR | 35.0% | |
| !! | AGCTGCCTTATGATTTGTTT+AGG | + | chr7_4:48963140-48963159 | Msa1159350:three_prime_UTR | 35.0% |
| TTGCATCATATGCATCCATT+TGG | + | chr7_4:48963234-48963253 | Msa1159350:three_prime_UTR | 35.0% | |
| AGTTCACACTTGATACAGAA+GGG | + | chr7_4:48963280-48963299 | Msa1159350:three_prime_UTR | 35.0% | |
| CAAAGGAGGAAGAATTGTTG+TGG | - | chr7_4:48959443-48959462 | None:intergenic | 40.0% | |
| GACATCTTCGGCAATGTTAA+CGG | - | chr7_4:48959578-48959597 | None:intergenic | 40.0% | |
| AAGTACCTGAGTGACATCTT+CGG | - | chr7_4:48959590-48959609 | None:intergenic | 40.0% | |
| GCACTTACACTTCTGATTGA+AGG | + | chr7_4:48959643-48959662 | Msa1159350:intron | 40.0% | |
| TTCTGATTGAAGGCTTGTCT+AGG | + | chr7_4:48959653-48959672 | Msa1159350:intron | 40.0% | |
| TGCTGCAAAACTTGAATCCA+TGG | + | chr7_4:48959825-48959844 | Msa1159350:CDS | 40.0% | |
| AAAGCTTAGGTTACGGATCT+TGG | + | chr7_4:48960072-48960091 | Msa1159350:intron | 40.0% | |
| GTCTGCACAAATACACAATC+AGG | - | chr7_4:48960112-48960131 | None:intergenic | 40.0% | |
| GAACCTACAACTGGAAATAC+GGG | + | chr7_4:48960142-48960161 | Msa1159350:CDS | 40.0% | |
| CAGTTTATAACCCTTCGTTG+CGG | - | chr7_4:48960188-48960207 | None:intergenic | 40.0% | |
| !!! | AGAGGTTGTTTTGACGAATG+CGG | + | chr7_4:48960270-48960289 | Msa1159350:CDS | 40.0% |
| !! | AAACATGTAAGCATTGGGTG+TGG | - | chr7_4:48960344-48960363 | None:intergenic | 40.0% |
| CTGTCGAAACATGTAAGCAT+TGG | - | chr7_4:48960350-48960369 | None:intergenic | 40.0% | |
| CACGGTGATTAAAAAGGTGA+AGG | - | chr7_4:48960425-48960444 | None:intergenic | 40.0% | |
| AGATCCACTTCGAAACTACA+GGG | + | chr7_4:48960525-48960544 | Msa1159350:intron | 40.0% | |
| AATGGTCTATGCCTTCCTTT+CGG | - | chr7_4:48960926-48960945 | None:intergenic | 40.0% | |
| GAGACATACCTGAATGTAGT+CGG | + | chr7_4:48961019-48961038 | Msa1159350:intron | 40.0% | |
| ATAATCTCAGGAGACAATCC+AGG | + | chr7_4:48961184-48961203 | Msa1159350:CDS | 40.0% | |
| ! | CTGTTTCAGGTGGAAATGAA+GGG | - | chr7_4:48961265-48961284 | None:intergenic | 40.0% |
| ! | TCTGTTTCAGGTGGAAATGA+AGG | - | chr7_4:48961266-48961285 | None:intergenic | 40.0% |
| ! | ATCAGCTGTTGACTGTATTG+GGG | + | chr7_4:48961293-48961312 | Msa1159350:intron | 40.0% |
| !! | TGTATTGGGGAATTTGTTGC+AGG | + | chr7_4:48961306-48961325 | Msa1159350:intron | 40.0% |
| GATGAAGTCGTCAAGGTAAA+CGG | + | chr7_4:48961363-48961382 | Msa1159350:intron | 40.0% | |
| TCTGGTCATACAAACCTGTT+AGG | + | chr7_4:48961427-48961446 | Msa1159350:intron | 40.0% | |
| CTGGTCATACAAACCTGTTA+GGG | + | chr7_4:48961428-48961447 | Msa1159350:intron | 40.0% | |
| AGTTATCTACATACACCCTC+CGG | + | chr7_4:48961493-48961512 | Msa1159350:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr7_4:48961511-48961530 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr7_4:48961512-48961531 | None:intergenic | 40.0% | |
| ! | AGCATTGGAAGAAGGATTAC+TGG | + | chr7_4:48961857-48961876 | Msa1159350:CDS | 40.0% |
| !!! | TTTTTTGAGGGAACTGAAGC+AGG | + | chr7_4:48962032-48962051 | Msa1159350:intron | 40.0% |
| ! | CCACGTTACTTTGTAGCTTA+CGG | - | chr7_4:48962165-48962184 | None:intergenic | 40.0% |
| CTGCGATAACTTTAGCAAGA+CGG | + | chr7_4:48962265-48962284 | Msa1159350:CDS | 40.0% | |
| ! | AGGTGTTGTGCCTAGATATA+TGG | + | chr7_4:48962470-48962489 | Msa1159350:intron | 40.0% |
| ! | TCATTTGCCACTTCTGTGAA+GGG | - | chr7_4:48962747-48962766 | None:intergenic | 40.0% |
| ! | ATCATTTGCCACTTCTGTGA+AGG | - | chr7_4:48962748-48962767 | None:intergenic | 40.0% |
| GGTGAATGGAGTGACAAATA+CGG | + | chr7_4:48962773-48962792 | Msa1159350:intron | 40.0% | |
| GTGAATGGAGTGACAAATAC+GGG | + | chr7_4:48962774-48962793 | Msa1159350:intron | 40.0% | |
| ATTCCAAAATTCCACACCCT+AGG | - | chr7_4:48962845-48962864 | None:intergenic | 40.0% | |
| AGATACCTCTCACCAAAACT+AGG | - | chr7_4:48962996-48963015 | None:intergenic | 40.0% | |
| GAATGTCATCGTCCACATTA+AGG | - | chr7_4:48963081-48963100 | None:intergenic | 40.0% | |
| GCATCCATTTGGACAACTAA+CGG | + | chr7_4:48963245-48963264 | Msa1159350:three_prime_UTR | 40.0% | |
| AGAACCGTTAGTTGTCCAAA+TGG | - | chr7_4:48963252-48963271 | None:intergenic | 40.0% | |
| GAGTTCACACTTGATACAGA+AGG | + | chr7_4:48963279-48963298 | Msa1159350:three_prime_UTR | 40.0% | |
| GTTCACACTTGATACAGAAG+GGG | + | chr7_4:48963281-48963300 | Msa1159350:three_prime_UTR | 40.0% | |
| ! | ACAACGTCTTACATTTTGGG+GGG | - | chr7_4:48963472-48963491 | None:intergenic | 40.0% |
| ! | CACAACGTCTTACATTTTGG+GGG | - | chr7_4:48963473-48963492 | None:intergenic | 40.0% |
| ! | GCACAACGTCTTACATTTTG+GGG | - | chr7_4:48963474-48963493 | None:intergenic | 40.0% |
| ! | CGCACAACGTCTTACATTTT+GGG | - | chr7_4:48963475-48963494 | None:intergenic | 40.0% |
| ! | TCGCACAACGTCTTACATTT+TGG | - | chr7_4:48963476-48963495 | None:intergenic | 40.0% |
| TGAGTAGTGAAAGGACGCAA+AGG | - | chr7_4:48959460-48959479 | None:intergenic | 45.0% | |
| CGGTGGAATTGAGTAGTGAA+AGG | - | chr7_4:48959469-48959488 | None:intergenic | 45.0% | |
| CTGGTGGTAGAGAAAAGTGA+CGG | - | chr7_4:48959541-48959560 | None:intergenic | 45.0% | |
| ! | CTTTTCTCTACCACCAGAGA+AGG | + | chr7_4:48959544-48959563 | Msa1159350:CDS | 45.0% |
| CTATCCTTGACACTTCTGCA+AGG | - | chr7_4:48959853-48959872 | None:intergenic | 45.0% | |
| !! | CTTGCAGAAGTGTCAAGGAT+AGG | + | chr7_4:48959851-48959870 | Msa1159350:CDS | 45.0% |
| TTAGCTGATGCTGAAGAGAG+TGG | + | chr7_4:48959966-48959985 | Msa1159350:CDS | 45.0% | |
| AGAGAGTGGAGCAATTTCTC+CGG | + | chr7_4:48959980-48959999 | Msa1159350:CDS | 45.0% | |
| AGTCCCGTATTTCCAGTTGT+AGG | - | chr7_4:48960148-48960167 | None:intergenic | 45.0% | |
| ACAACTGGAAATACGGGACT+TGG | + | chr7_4:48960148-48960167 | Msa1159350:CDS | 45.0% | |
| CTGCACCAAATGTGCGTAAA+AGG | - | chr7_4:48960252-48960271 | None:intergenic | 45.0% | |
| !! | TTTACGCACATTTGGTGCAG+AGG | + | chr7_4:48960252-48960271 | Msa1159350:CDS | 45.0% |
| !!! | TGTTTTGACGAATGCGGAGA+AGG | + | chr7_4:48960276-48960295 | Msa1159350:CDS | 45.0% |
| !! | GTTTTGACGAATGCGGAGAA+GGG | + | chr7_4:48960277-48960296 | Msa1159350:CDS | 45.0% |
| ! | TTTTGACGAATGCGGAGAAG+GGG | + | chr7_4:48960278-48960297 | Msa1159350:CDS | 45.0% |
| GGTGAAGGTCTCATATGAGA+TGG | - | chr7_4:48960410-48960429 | None:intergenic | 45.0% | |
| CAGATCCACTTCGAAACTAC+AGG | + | chr7_4:48960524-48960543 | Msa1159350:intron | 45.0% | |
| AAACTACAGGGCCAGAGATA+TGG | + | chr7_4:48960537-48960556 | Msa1159350:CDS | 45.0% | |
| AACTACAGGGCCAGAGATAT+GGG | + | chr7_4:48960538-48960557 | Msa1159350:CDS | 45.0% | |
| ACTGTATCCTCCCATATCTC+TGG | - | chr7_4:48960551-48960570 | None:intergenic | 45.0% | |
| AGAGATATGGGAGGATACAG+TGG | + | chr7_4:48960550-48960569 | Msa1159350:CDS | 45.0% | |
| GAGATATGGGAGGATACAGT+GGG | + | chr7_4:48960551-48960570 | Msa1159350:CDS | 45.0% | |
| TTGGTTGCTGCTATTGGAAC+TGG | + | chr7_4:48960587-48960606 | Msa1159350:CDS | 45.0% | |
| ! | AACAGATGCCGACTACATTC+AGG | - | chr7_4:48961030-48961049 | None:intergenic | 45.0% |
| GTTTAATTAGGTGGTTGGGG+TGG | + | chr7_4:48961144-48961163 | Msa1159350:intron | 45.0% | |
| ACTGCTTGATGAAGTCGTCA+AGG | + | chr7_4:48961356-48961375 | Msa1159350:CDS | 45.0% | |
| CCGTAAGCTACAAAGTAACG+TGG | + | chr7_4:48962162-48962181 | Msa1159350:intron | 45.0% | |
| ! | CATTTGCCACTTCTGTGAAG+GGG | - | chr7_4:48962746-48962765 | None:intergenic | 45.0% |
| TTAGCTTATAGCCTAGGGTG+TGG | + | chr7_4:48962831-48962850 | Msa1159350:intron | 45.0% | |
| ! | TAGCCTAGGGTGTGGAATTT+TGG | + | chr7_4:48962839-48962858 | Msa1159350:intron | 45.0% |
| GGACGATGACATTCGGAAAT+TGG | + | chr7_4:48963087-48963106 | Msa1159350:three_prime_UTR | 45.0% | |
| GGAAATTGGAGCTGCTATCA+TGG | + | chr7_4:48963101-48963120 | Msa1159350:three_prime_UTR | 45.0% | |
| GTACAATGTATTCTGCGTGC+TGG | + | chr7_4:48963315-48963334 | Msa1159350:three_prime_UTR | 45.0% | |
| ! | ATTCTGCGTGCTGGTAATCT+AGG | + | chr7_4:48963324-48963343 | Msa1159350:three_prime_UTR | 45.0% |
| GGAGGAAGAATTGTTGTGGG+AGG | - | chr7_4:48959439-48959458 | None:intergenic | 50.0% | |
| GTAGTGAAAGGACGCAAAGG+AGG | - | chr7_4:48959457-48959476 | None:intergenic | 50.0% | |
| TTCGGCGGAAACGGATGTTA+CGG | - | chr7_4:48959489-48959508 | None:intergenic | 50.0% | |
| CGGAAATTGTTCGGCGGAAA+CGG | - | chr7_4:48959498-48959517 | None:intergenic | 50.0% | |
| !! | TAGCGGTGGCGGAAATTGTT+CGG | - | chr7_4:48959507-48959526 | None:intergenic | 50.0% |
| TGACGGAGTGGAAACTGTAG+CGG | - | chr7_4:48959524-48959543 | None:intergenic | 50.0% | |
| ! | GGTAGAGAAAAGTGACGGAG+TGG | - | chr7_4:48959536-48959555 | None:intergenic | 50.0% |
| CATTGCCGAAGATGTCACTC+AGG | + | chr7_4:48959582-48959601 | Msa1159350:CDS | 50.0% | |
| GACACTTCTGCAAGGTTCCA+TGG | - | chr7_4:48959845-48959864 | None:intergenic | 50.0% | |
| !! | GGAACCTTGCAGAAGTGTCA+AGG | + | chr7_4:48959846-48959865 | Msa1159350:CDS | 50.0% |
| GAGAGTGGAGCAATTTCTCC+GGG | + | chr7_4:48959981-48960000 | Msa1159350:CDS | 50.0% | |
| AGAGTGGAGCAATTTCTCCG+GGG | + | chr7_4:48959982-48960001 | Msa1159350:CDS | 50.0% | |
| CCTTCACAACATACCTTCCC+CGG | - | chr7_4:48960002-48960021 | None:intergenic | 50.0% | |
| TCGTTGCGGCAACAAAAGCA+AGG | - | chr7_4:48960174-48960193 | None:intergenic | 50.0% | |
| ! | TGCTTTTGTTGCCGCAACGA+AGG | + | chr7_4:48960174-48960193 | Msa1159350:CDS | 50.0% |
| ! | GCTTTTGTTGCCGCAACGAA+GGG | + | chr7_4:48960175-48960194 | Msa1159350:CDS | 50.0% |
| GTTGCTGCTATTGGAACTGG+CGG | + | chr7_4:48960590-48960609 | Msa1159350:CDS | 50.0% | |
| GCAAGACGGCCTGAAAATTC+TGG | + | chr7_4:48962279-48962298 | Msa1159350:CDS | 50.0% | |
| AGTGGAAACTGTAGCGGTGG+CGG | - | chr7_4:48959518-48959537 | None:intergenic | 55.0% | |
| AACGGCGTCAAGTCCTTCTC+TGG | - | chr7_4:48959560-48959579 | None:intergenic | 55.0% | |
| TGGAGCAATTTCTCCGGGGA+AGG | + | chr7_4:48959986-48960005 | Msa1159350:CDS | 55.0% | |
| ! | CCGGGGAAGGTATGTTGTGA+AGG | + | chr7_4:48959999-48960018 | Msa1159350:intron | 55.0% |
| AATGCGGAGAAGGGGCTGAA+AGG | + | chr7_4:48960286-48960305 | Msa1159350:CDS | 55.0% | |
| ATGCGGAGAAGGGGCTGAAA+GGG | + | chr7_4:48960287-48960306 | Msa1159350:CDS | 55.0% | |
| CTGGCCCTGTAGTTTCGAAG+TGG | - | chr7_4:48960532-48960551 | None:intergenic | 55.0% | |
| TACAGGGCCAGAGATATGGG+AGG | + | chr7_4:48960541-48960560 | Msa1159350:CDS | 55.0% | |
| GGAACTGGCGGCACTATTAC+AGG | + | chr7_4:48960602-48960621 | Msa1159350:CDS | 55.0% | |
| TGGCGGCACTATTACAGGCA+CGG | + | chr7_4:48960607-48960626 | Msa1159350:CDS | 55.0% | |
| TGTGCTCCCCTTCACAGAAG+TGG | + | chr7_4:48962737-48962756 | Msa1159350:intron | 55.0% | |
| GGCGGAAACGGATGTTACGG+TGG | - | chr7_4:48959486-48959505 | None:intergenic | 60.0% | |
| !! | CGGTGGCGGAAATTGTTCGG+CGG | - | chr7_4:48959504-48959523 | None:intergenic | 60.0% |
| CGGAGTGGAAACTGTAGCGG+TGG | - | chr7_4:48959521-48959540 | None:intergenic | 60.0% | |
| GGCGTCAAGTCCTTCTCTGG+TGG | - | chr7_4:48959557-48959576 | None:intergenic | 60.0% | |
| TGCGGAGAAGGGGCTGAAAG+GGG | + | chr7_4:48960288-48960307 | Msa1159350:CDS | 60.0% | |
| GGCGGCACTATTACAGGCAC+GGG | + | chr7_4:48960608-48960627 | Msa1159350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48959391 | 48963553 | 48959391 | ID=Msa1159350;Name=Msa1159350 |
| chr7_4 | mRNA | 48959391 | 48963553 | 48959391 | ID=Msa1159350-mRNA-1;Parent=Msa1159350;Name=Msa1159350-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.9|1|0.88|0.9|10|489|368 |
| chr7_4 | exon | 48959391 | 48959603 | 48959391 | ID=Msa1159350-mRNA-1:exon:13339;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48959763 | 48959872 | 48959763 | ID=Msa1159350-mRNA-1:exon:13340;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48959950 | 48960007 | 48959950 | ID=Msa1159350-mRNA-1:exon:13341;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48960130 | 48960393 | 48960130 | ID=Msa1159350-mRNA-1:exon:13342;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48960527 | 48960664 | 48960527 | ID=Msa1159350-mRNA-1:exon:13343;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48961154 | 48961205 | 48961154 | ID=Msa1159350-mRNA-1:exon:13344;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48961328 | 48961377 | 48961328 | ID=Msa1159350-mRNA-1:exon:13345;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48961819 | 48961878 | 48961819 | ID=Msa1159350-mRNA-1:exon:13346;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48962234 | 48962314 | 48962234 | ID=Msa1159350-mRNA-1:exon:13347;Parent=Msa1159350-mRNA-1 |
| chr7_4 | exon | 48962984 | 48963553 | 48962984 | ID=Msa1159350-mRNA-1:exon:13348;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48959391 | 48959603 | 48959391 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48959763 | 48959872 | 48959763 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48959950 | 48960007 | 48959950 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48960130 | 48960393 | 48960130 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48960527 | 48960664 | 48960527 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48961154 | 48961205 | 48961154 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48961328 | 48961377 | 48961328 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48961819 | 48961878 | 48961819 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48962234 | 48962314 | 48962234 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | CDS | 48962984 | 48963064 | 48962984 | ID=Msa1159350-mRNA-1:cds;Parent=Msa1159350-mRNA-1 |
| chr7_4 | three_prime_UTR | 48963065 | 48963553 | 48963065 | ID=Msa1159350-mRNA-1:three_prime_utr;Parent=Msa1159350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
