AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1041280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041280 MtrunA17_Chr1g0195111 78.677 1013 196 5 5 1001 2 1010 0.0 1616
Msa1041280 MtrunA17_Chr7g0269691 97.112 554 16 0 2 555 3 556 0.0 1125
Msa1041280 MtrunA17_Chr7g0271961 55.512 1016 385 21 16 999 16 996 0.0 1015
Msa1041280 MtrunA17_Chr7g0269681 91.974 461 23 1 555 1001 21 481 0.0 875
Msa1041280 MtrunA17_Chr3g0102921 49.320 809 336 18 26 771 41 838 0.0 706
Msa1041280 MtrunA17_Chr5g0447041 47.795 839 333 19 26 771 37 863 0.0 699
Msa1041280 MtrunA17_Chr1g0192481 69.176 425 114 4 342 750 1 424 0.0 612
Msa1041280 MtrunA17_Chr7g0257301 45.443 779 351 16 26 745 12 775 0.0 607
Msa1041280 MtrunA17_Chr1g0192491 61.455 275 97 3 4 270 6 279 4.75e-105 329
Msa1041280 MtrunA17_Chr5g0411971 42.233 412 209 6 379 772 379 779 3.16e-94 322
Msa1041280 MtrunA17_Chr5g0421521 41.505 412 212 6 379 772 354 754 1.06e-92 316
Msa1041280 MtrunA17_Chr5g0421591 41.505 412 212 6 379 772 354 754 2.41e-92 314
Msa1041280 MtrunA17_Chr1g0191851 44.059 404 197 8 338 723 89 481 5.54e-92 310
Msa1041280 MtrunA17_Chr2g0312631 45.000 380 178 7 387 745 372 741 1.04e-91 315
Msa1041280 MtrunA17_Chr7g0272871 44.231 364 175 6 379 723 107 461 1.01e-86 294
Msa1041280 MtrunA17_Chr2g0280421 40.995 422 202 12 325 721 365 764 3.77e-81 280
Msa1041280 MtrunA17_Chr6g0484511 44.444 306 163 3 250 554 146 445 8.73e-80 268
Msa1041280 MtrunA17_Chr2g0319271 41.799 378 167 11 387 724 387 751 2.28e-78 272
Msa1041280 MtrunA17_Chr4g0042061 42.246 374 170 9 387 724 420 783 2.56e-76 267
Msa1041280 MtrunA17_Chr8g0386901 55.217 230 101 2 327 554 411 640 6.63e-76 263
Msa1041280 MtrunA17_Chr8g0390981 49.794 243 121 1 327 568 443 685 1.37e-73 257
Msa1041280 MtrunA17_Chr8g0369881 41.615 322 177 4 387 706 863 1175 2.24e-70 256
Msa1041280 MtrunA17_Chr5g0407791 40.950 337 188 5 372 706 862 1189 2.49e-70 256
Msa1041280 MtrunA17_Chr8g0386891 63.158 190 56 1 574 749 3 192 3.50e-69 237
Msa1041280 MtrunA17_Chr4g0049011 36.385 426 219 11 333 721 206 616 1.16e-67 239
Msa1041280 MtrunA17_Chr6g0484501 59.314 204 69 1 560 749 19 222 1.49e-64 218
Msa1041280 MtrunA17_Chr1g0191181 39.071 366 206 9 380 738 69 424 1.48e-61 221
Msa1041280 MtrunA17_Chr8g0390991 59.896 192 60 2 572 749 1 189 7.28e-58 209
Msa1041280 MtrunA17_Chr8g0367581 38.253 332 177 8 382 706 129 439 2.35e-56 213
Msa1041280 MtrunA17_Chr4g0069141 38.872 337 169 11 437 742 189 519 7.88e-52 199
Msa1041280 MtrunA17_Chr2g0322291 40.059 337 167 10 437 743 124 455 1.95e-51 197
Msa1041280 MtrunA17_Chr3g0122121 38.024 334 163 12 400 706 99 415 5.23e-50 192
Msa1041280 MtrunA17_Chr4g0045381 38.235 340 166 10 437 738 229 562 6.83e-50 193
Msa1041280 MtrunA17_Chr1g0182151 37.015 335 182 10 394 706 49 376 1.61e-49 191
Msa1041280 MtrunA17_Chr5g0398521 36.047 344 171 8 398 709 56 382 2.21e-49 189
Msa1041280 MtrunA17_Chr3g0132921 32.258 403 215 12 392 752 2 388 2.96e-49 183
Msa1041280 MtrunA17_Chr3g0134191 32.598 408 219 12 400 758 9 409 5.74e-49 189
Msa1041280 MtrunA17_Chr1g0153061 33.920 398 207 13 400 748 9 399 7.53e-49 188
Msa1041280 MtrunA17_Chr2g0327581 35.735 347 196 11 381 706 30 370 9.93e-48 185
Msa1041280 MtrunA17_Chr1g0178411 36.095 338 175 11 399 706 13 339 2.58e-47 184
Msa1041280 MtrunA17_Chr8g0377731 36.675 379 191 13 400 743 56 420 3.69e-47 183
Msa1041280 MtrunA17_Chr1g0193221 34.474 380 186 13 400 742 4 357 5.62e-47 183
Msa1041280 MtrunA17_Chr4g0053211 35.632 348 175 11 399 706 12 350 1.55e-46 181
Msa1041280 MtrunA17_Chr7g0266631 35.503 338 177 11 399 706 9 335 3.39e-46 180
Msa1041280 MtrunA17_Chr7g0245931 35.398 339 179 9 398 709 51 376 5.30e-46 179
Msa1041280 MtrunA17_Chr2g0307481 37.304 319 176 10 400 706 69 375 6.20e-45 172
Msa1041280 MtrunA17_Chr5g0427481 31.854 383 206 12 400 741 18 386 8.37e-45 176
Msa1041280 MtrunA17_Chr1g0152231 36.335 322 181 9 400 708 4 314 8.22e-44 171
Msa1041280 MtrunA17_Chr4g0062291 40.221 271 146 7 441 706 174 433 1.56e-43 169
Msa1041280 MtrunA17_Chr5g0405181 33.500 400 209 15 400 765 21 397 2.30e-42 167
Msa1041280 MtrunA17_Chr8g0372171 34.759 374 196 15 400 743 20 375 3.11e-42 167
Msa1041280 MtrunA17_Chr6g0483701 35.389 373 189 16 400 741 31 382 3.85e-42 167
Msa1041280 MtrunA17_Chr3g0142261 33.871 372 197 13 400 741 20 372 8.90e-41 164
Msa1041280 MtrunA17_Chr4g0036001 32.891 377 211 10 391 741 16 376 1.00e-40 162
Msa1041280 MtrunA17_Chr7g0258991 33.693 371 207 12 394 741 68 422 2.59e-40 161
Msa1041280 MtrunA17_Chr4g0070001 33.696 368 203 11 400 745 144 492 3.20e-39 158
Msa1041280 MtrunA17_Chr3g0145071 34.877 367 196 14 399 741 99 446 1.09e-38 156
Msa1041280 MtrunA17_Chr5g0445211 32.673 404 214 15 395 759 70 454 1.65e-37 152
Msa1041280 MtrunA17_Chr4g0035661 33.424 368 204 13 397 741 87 436 3.19e-37 152
Msa1041280 MtrunA17_Chr3g0101021 33.898 354 186 13 439 754 104 447 5.08e-36 148
Msa1041280 MtrunA17_Chr7g0238581 32.184 348 179 11 400 717 26 346 2.33e-35 143
Msa1041280 MtrunA17_Chr1g0187411 31.322 348 194 10 400 717 131 463 1.77e-28 123
Msa1041280 MtrunA17_Chr2g0331761 30.741 270 164 7 443 706 235 487 2.22e-28 122
Msa1041280 MtrunA17_Chr4g0067421 27.895 380 219 13 357 706 164 518 1.26e-27 120
Msa1041280 MtrunA17_Chr2g0295881 32.270 282 156 8 443 706 248 512 1.47e-27 120
Msa1041280 MtrunA17_Chr6g0485471 30.855 269 165 7 443 706 165 417 1.51e-27 119
Msa1041280 MtrunA17_Chr6g0470541 26.140 329 188 15 400 706 6 301 9.83e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041280 AT2G47500.1 61.523 1024 310 13 4 997 8 977 0.0 1206
Msa1041280 AT2G47500.2 63.292 978 289 11 4 957 8 939 0.0 1202
Msa1041280 AT5G27000.1 52.838 1022 403 25 7 998 11 983 0.0 981
Msa1041280 AT1G09170.5 49.949 983 417 23 42 974 56 1013 0.0 870
Msa1041280 AT1G09170.4 58.021 748 271 10 42 751 56 798 0.0 864
Msa1041280 AT1G09170.2 58.021 748 271 10 42 751 56 798 0.0 864
Msa1041280 AT1G09170.3 57.866 731 265 10 42 734 56 781 0.0 842
Msa1041280 AT1G09170.7 57.866 731 265 10 42 734 56 781 0.0 842
Msa1041280 AT1G09170.1 47.760 982 404 22 42 974 56 977 0.0 809
Msa1041280 AT1G09170.6 57.522 678 259 9 42 695 56 728 0.0 785
Msa1041280 AT1G09170.8 57.522 678 259 9 42 695 56 728 0.0 785
Msa1041280 AT3G44730.2 49.440 803 334 17 28 771 21 810 0.0 721
Msa1041280 AT3G44730.3 49.440 803 334 17 28 771 21 810 0.0 721
Msa1041280 AT3G44730.1 49.418 773 320 16 58 771 5 765 0.0 694
Msa1041280 AT3G44730.4 49.418 773 320 16 58 771 5 765 0.0 694
Msa1041280 AT3G10310.2 47.182 763 353 18 26 766 5 739 0.0 590
Msa1041280 AT3G10310.1 47.182 763 353 18 26 766 5 739 0.0 590
Msa1041280 AT1G73860.2 49.374 559 254 8 215 749 238 791 3.31e-166 512
Msa1041280 AT1G18410.3 55.745 470 190 4 296 749 386 853 3.07e-165 512
Msa1041280 AT1G18410.2 55.745 470 190 4 296 749 386 853 3.07e-165 512
Msa1041280 AT1G73860.1 49.374 559 254 8 215 749 321 874 5.79e-165 511
Msa1041280 AT1G18410.4 55.745 470 190 4 296 749 529 996 3.94e-163 510
Msa1041280 AT1G18410.1 55.745 470 182 5 296 749 529 988 1.55e-160 503
Msa1041280 AT1G63640.1 57.208 437 169 4 327 747 400 834 6.83e-159 497
Msa1041280 AT1G63640.4 57.208 437 169 4 327 747 400 834 6.83e-159 497
Msa1041280 AT1G63640.3 57.208 437 169 4 327 747 400 834 9.11e-159 496
Msa1041280 AT1G63640.5 57.208 437 169 4 327 747 390 824 9.82e-159 496
Msa1041280 AT1G18410.5 55.106 470 180 6 296 749 376 830 3.57e-158 493
Msa1041280 AT1G63640.2 56.979 437 163 4 327 747 400 827 1.17e-156 491
Msa1041280 AT5G41310.1 55.632 435 157 4 329 747 352 766 9.47e-153 478
Msa1041280 AT1G72250.1 39.400 500 248 12 287 745 364 849 7.72e-94 324
Msa1041280 AT1G72250.2 46.194 381 179 6 384 745 485 858 4.07e-93 322
Msa1041280 AT1G72250.3 46.194 381 179 6 384 745 497 870 4.35e-93 322
Msa1041280 AT1G72250.4 46.194 381 179 6 384 745 496 869 4.52e-93 322
Msa1041280 AT2G22610.2 45.144 381 176 7 387 749 405 770 1.04e-92 318
Msa1041280 AT2G22610.1 45.263 380 175 7 387 748 405 769 1.42e-92 318
Msa1041280 AT2G22610.3 45.263 380 175 7 387 748 406 770 1.82e-92 318
Msa1041280 AT5G27550.2 45.646 379 166 7 385 738 118 481 1.93e-90 306
Msa1041280 AT5G27550.1 45.646 379 166 7 385 738 118 481 1.93e-90 306
Msa1041280 AT5G54670.3 46.111 360 157 9 387 721 324 671 1.47e-84 288
Msa1041280 AT5G54670.1 46.111 360 157 9 387 721 384 731 6.17e-84 288
Msa1041280 AT5G54670.2 46.111 360 157 9 387 721 384 731 6.17e-84 288
Msa1041280 AT4G27180.1 45.580 362 156 9 387 721 375 722 4.57e-83 285
Msa1041280 AT4G27180.2 45.580 362 156 9 387 721 375 722 4.57e-83 285
Msa1041280 AT4G21270.1 43.443 366 162 9 387 721 419 770 1.07e-76 268
Msa1041280 AT4G05190.2 44.321 361 166 9 387 721 403 754 1.15e-76 268
Msa1041280 AT4G05190.1 44.321 361 166 9 387 721 416 767 1.65e-76 268
Msa1041280 AT5G65930.2 41.875 320 179 3 387 706 876 1188 1.12e-69 254
Msa1041280 AT5G65930.1 41.875 320 179 3 387 706 875 1187 1.24e-69 254
Msa1041280 AT5G65930.3 41.875 320 179 3 387 706 882 1194 1.38e-69 254
Msa1041280 AT1G55550.1 41.538 325 176 4 387 708 79 392 4.85e-68 245
Msa1041280 AT5G27950.1 42.308 338 165 11 383 706 62 383 2.99e-62 224
Msa1041280 AT3G17360.1 40.708 339 158 14 437 741 204 533 6.93e-53 203
Msa1041280 AT3G17360.2 40.708 339 158 14 437 741 204 533 7.00e-53 203
Msa1041280 AT3G17360.3 40.708 339 158 14 437 741 204 533 9.28e-53 202
Msa1041280 AT3G44050.1 38.824 340 173 8 437 746 129 463 1.69e-51 198
Msa1041280 AT5G65460.2 36.119 335 186 10 382 709 121 434 1.79e-51 197
Msa1041280 AT5G65460.6 36.119 335 186 10 382 709 121 434 2.07e-51 197
Msa1041280 AT5G65460.1 36.119 335 186 10 382 709 121 434 2.65e-51 197
Msa1041280 AT5G65460.4 36.119 335 186 10 382 709 121 434 3.09e-51 197
Msa1041280 AT5G65460.3 36.095 338 189 10 382 709 121 441 1.09e-50 195
Msa1041280 AT3G63480.2 37.143 315 183 6 442 748 47 354 1.25e-50 186
Msa1041280 AT4G14150.1 38.788 330 163 11 400 706 92 405 5.38e-50 193
Msa1041280 AT3G63480.1 37.618 319 180 8 442 748 47 358 5.60e-50 184
Msa1041280 AT5G47820.2 33.995 403 206 14 399 748 11 406 6.62e-50 192
Msa1041280 AT5G47820.1 33.995 403 206 14 399 748 11 406 6.62e-50 192
Msa1041280 AT3G19050.1 40.549 328 160 10 437 734 229 551 7.39e-50 193
Msa1041280 AT3G23670.2 37.576 330 167 10 400 706 97 410 1.18e-48 188
Msa1041280 AT2G28620.1 36.923 325 185 9 399 706 50 371 2.12e-48 187
Msa1041280 AT2G28620.3 36.923 325 185 9 399 706 50 371 2.40e-48 187
Msa1041280 AT2G28620.2 36.923 325 185 9 399 706 50 371 2.40e-48 187
Msa1041280 AT3G23670.1 37.576 330 167 10 400 706 97 410 2.59e-48 188
Msa1041280 AT2G37420.1 37.538 333 172 10 399 706 48 369 3.53e-48 187
Msa1041280 AT2G37420.2 37.538 333 172 10 399 706 48 369 3.53e-48 187
Msa1041280 AT1G59540.1 38.125 320 170 11 400 708 4 306 7.37e-48 184
Msa1041280 AT5G10470.1 35.366 328 192 8 382 706 125 435 8.65e-48 186
Msa1041280 AT5G10470.2 35.366 328 192 8 382 706 125 435 8.73e-48 186
Msa1041280 AT2G36200.1 35.542 332 185 9 399 706 12 338 5.37e-47 183
Msa1041280 AT2G36200.2 35.542 332 185 9 399 706 12 338 8.18e-47 182
Msa1041280 AT3G50240.2 34.897 341 181 11 400 706 26 359 1.05e-46 182
Msa1041280 AT3G50240.1 34.897 341 181 11 400 706 26 359 1.46e-46 182
Msa1041280 AT3G50240.4 34.897 341 181 11 400 706 26 359 1.62e-46 181
Msa1041280 AT4G24170.1 37.460 315 173 8 400 706 7 305 2.38e-46 181
Msa1041280 AT4G24170.2 37.460 315 173 8 400 706 7 305 2.38e-46 181
Msa1041280 AT4G38950.3 34.865 370 195 12 400 741 14 365 6.06e-46 179
Msa1041280 AT4G38950.5 34.865 370 195 12 400 741 14 365 6.06e-46 179
Msa1041280 AT4G38950.4 34.865 370 195 12 400 741 14 365 6.06e-46 179
Msa1041280 AT4G38950.1 34.865 370 195 12 400 741 14 365 6.06e-46 179
Msa1041280 AT4G38950.2 34.865 370 195 12 400 741 14 365 6.06e-46 179
Msa1041280 AT1G12430.1 38.408 289 148 6 442 709 115 394 7.42e-46 179
Msa1041280 AT1G12430.2 38.408 289 148 6 442 709 115 394 7.72e-46 179
Msa1041280 AT3G45850.2 36.615 325 184 9 400 706 56 376 8.13e-46 179
Msa1041280 AT3G45850.1 36.615 325 184 9 400 706 56 376 8.13e-46 179
Msa1041280 AT5G60930.3 31.579 399 214 12 400 748 7 396 1.33e-45 179
Msa1041280 AT5G60930.2 31.579 399 214 12 400 748 7 396 1.35e-45 179
Msa1041280 AT5G60930.1 31.579 399 214 12 400 748 7 396 1.52e-45 179
Msa1041280 AT1G18550.1 40.741 270 145 7 441 706 202 460 1.60e-44 173
Msa1041280 AT1G18370.1 38.750 320 164 12 400 706 32 332 1.84e-44 175
Msa1041280 AT3G54870.3 36.519 293 157 8 435 709 142 423 3.72e-44 174
Msa1041280 AT3G54870.1 36.519 293 157 8 435 709 142 423 3.73e-44 174
Msa1041280 AT3G54870.2 36.519 293 157 8 435 709 142 423 4.48e-44 174
Msa1041280 AT1G01950.1 33.918 342 180 9 398 709 59 384 1.91e-43 171
Msa1041280 AT1G01950.2 33.918 342 180 9 398 709 59 384 2.09e-43 171
Msa1041280 AT1G01950.3 34.694 343 176 10 398 709 59 384 2.61e-43 171
Msa1041280 AT5G66310.2 34.501 371 197 14 400 741 19 372 1.76e-42 169
Msa1041280 AT5G66310.3 34.501 371 197 14 400 741 19 372 1.76e-42 169
Msa1041280 AT5G66310.1 34.501 371 197 14 400 741 19 372 1.76e-42 169
Msa1041280 AT2G21300.2 33.424 368 203 10 400 741 25 376 1.91e-42 168
Msa1041280 AT2G21300.4 33.424 368 203 10 400 741 25 376 1.91e-42 168
Msa1041280 AT2G21300.3 33.424 368 203 10 400 741 25 376 1.91e-42 168
Msa1041280 AT2G21300.1 33.424 368 203 10 400 741 25 376 1.91e-42 168
Msa1041280 AT2G21300.5 33.424 368 203 10 400 741 25 376 1.91e-42 168
Msa1041280 AT3G49650.1 36.232 276 163 4 435 706 58 324 3.49e-42 167
Msa1041280 AT3G51150.1 33.871 372 200 13 400 742 18 372 1.27e-41 166
Msa1041280 AT3G51150.2 33.871 372 200 13 400 742 18 372 1.29e-41 166
Msa1041280 AT3G51150.4 33.871 372 200 13 400 742 18 372 1.29e-41 166
Msa1041280 AT3G51150.3 33.871 372 200 13 400 742 18 372 1.29e-41 166
Msa1041280 AT3G43210.3 35.829 374 197 13 400 748 30 385 2.83e-41 164
Msa1041280 AT3G43210.5 35.829 374 197 13 400 748 30 385 2.83e-41 164
Msa1041280 AT3G43210.2 35.829 374 197 13 400 748 30 385 2.83e-41 164
Msa1041280 AT3G43210.4 35.829 374 197 13 400 748 30 385 2.83e-41 164
Msa1041280 AT3G43210.1 35.829 374 197 13 400 748 30 385 2.83e-41 164
Msa1041280 AT5G06670.5 33.333 375 204 12 397 741 64 422 3.12e-41 163
Msa1041280 AT1G21730.1 33.962 371 206 12 396 743 72 426 3.24e-41 164
Msa1041280 AT5G06670.8 33.333 375 204 12 397 741 64 422 3.91e-41 162
Msa1041280 AT5G06670.4 33.333 375 204 12 397 741 64 422 3.91e-41 162
Msa1041280 AT5G06670.7 33.333 375 204 12 397 741 64 422 3.91e-41 162
Msa1041280 AT5G06670.2 33.333 375 204 12 397 741 64 422 4.07e-41 164
Msa1041280 AT5G06670.3 33.333 375 204 12 397 741 64 422 4.07e-41 164
Msa1041280 AT5G06670.6 32.812 384 203 13 397 741 64 431 1.26e-39 159
Msa1041280 AT5G06670.1 32.812 384 203 13 397 741 64 431 1.26e-39 159
Msa1041280 AT4G39050.1 35.404 322 172 11 442 741 138 445 1.27e-39 160
Msa1041280 AT3G10180.2 33.526 346 175 12 442 751 39 365 4.85e-39 158
Msa1041280 AT3G10180.1 33.526 346 175 12 442 751 39 365 5.53e-39 158
Msa1041280 AT2G21380.2 34.472 322 175 11 442 741 144 451 9.00e-39 157
Msa1041280 AT2G21380.1 34.472 322 175 11 442 741 144 451 9.00e-39 157
Msa1041280 AT3G12020.4 35.604 323 181 11 393 706 63 367 6.43e-38 154
Msa1041280 AT3G12020.1 35.604 323 181 11 393 706 63 367 6.43e-38 154
Msa1041280 AT3G12020.3 35.737 319 178 11 397 706 67 367 1.01e-37 154
Msa1041280 AT3G12020.2 35.737 319 178 11 397 706 67 367 1.01e-37 154
Msa1041280 AT3G50240.3 38.521 257 124 8 482 706 3 257 1.63e-36 149
Msa1041280 AT1G01950.4 37.450 251 130 6 478 709 1 243 7.51e-35 143
Msa1041280 AT5G02370.1 30.882 340 190 9 399 717 20 335 6.53e-34 139
Msa1041280 AT3G20150.2 34.167 360 184 17 441 759 134 481 8.20e-34 141
Msa1041280 AT3G20150.1 34.167 360 184 17 441 759 134 481 9.93e-34 141
Msa1041280 AT4G14330.1 33.333 333 188 12 400 717 49 362 2.66e-32 136
Msa1041280 AT1G59540.2 38.596 228 116 8 491 708 1 214 2.79e-32 135
Msa1041280 AT5G42490.1 34.643 280 157 9 400 670 10 272 4.11e-31 132
Msa1041280 AT5G42490.2 34.643 280 157 9 400 670 10 272 4.13e-31 132
Msa1041280 AT3G16060.1 28.655 342 207 9 381 706 151 471 8.02e-29 124
Msa1041280 AT5G27950.2 39.013 223 113 8 498 706 4 217 1.08e-28 121
Msa1041280 AT3G16630.2 30.824 279 162 8 443 706 243 505 2.20e-26 117
Msa1041280 AT3G16630.1 30.824 279 162 8 443 706 243 505 2.20e-26 117
Msa1041280 AT3G51150.5 39.011 182 89 6 583 742 38 219 4.31e-23 106
Msa1041280 AT5G23910.2 28.369 282 181 8 427 707 43 304 2.15e-22 103
Msa1041280 AT5G23910.1 28.369 282 181 8 427 707 39 300 2.43e-22 103
Msa1041280 AT5G65460.5 35.789 190 104 5 524 709 13 188 4.00e-22 103

Find 240 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTCACCATAGGATTTA+AGG 0.111829 7_1:+78873802 None:intergenic
TGCTATAATTTCTCTATCTT+TGG 0.175574 7_1:-78869035 Msa1041280:three_prime_UTR
CCAGTTTAATAGCATTAATA+TGG 0.219340 7_1:-78869538 Msa1041280:CDS
GGCTTAGCTCACGCTGCTTC+TGG 0.222468 7_1:-78872287 Msa1041280:CDS
GCAAATGGTGTGTGGAAATT+TGG 0.237874 7_1:-78873768 Msa1041280:CDS
TAATAGTGACTTCTAGTTAA+TGG 0.239584 7_1:-78874762 Msa1041280:exon
TATGGTGAATGGAAACAAAA+TGG 0.250071 7_1:-78873792 Msa1041280:CDS
TGGATCTGCATCAAAGTTTA+TGG 0.250631 7_1:-78872861 Msa1041280:CDS
CAAAGAGCATTTGTTGCTTC+AGG 0.252079 7_1:+78872638 None:intergenic
TCATAAATCCTTACCAAGAT+TGG 0.266026 7_1:+78872433 None:intergenic
TTCAACTTTAACAAAGTCTT+TGG 0.269363 7_1:-78871959 Msa1041280:CDS
TTTGTTTGTTAGGAAGTATT+AGG 0.275891 7_1:-78872105 Msa1041280:intron
GGACTGTTCCGAGTACATTT+TGG 0.284873 7_1:+78869584 None:intergenic
AAAGCCAAGGTGTAAATTAT+AGG 0.285844 7_1:-78871617 Msa1041280:CDS
CTTATTAGATCTGTTCTTGA+TGG 0.299175 7_1:-78871811 Msa1041280:CDS
CTGGTGGCTGTACAAGAAAT+TGG 0.301182 7_1:-78874062 Msa1041280:CDS
GTTTATGGTGGCAGATAAAA+AGG 0.301867 7_1:-78872846 Msa1041280:intron
GCTAGGTTCGGGACCGAAAA+AGG 0.303706 7_1:-78875146 Msa1041280:five_prime_UTR
CTTGACAAGGAATTAGTAAA+TGG 0.312399 7_1:+78873690 None:intergenic
CTTGAATGTCTCTTTGTTGT+TGG 0.313889 7_1:+78872614 None:intergenic
GTTGACATGAAACGTAAAAT+TGG 0.314117 7_1:-78869157 Msa1041280:CDS
CGAGTAAGACCCTTCTTTCC+TGG 0.318985 7_1:-78872073 Msa1041280:CDS
TAACAAATCTCTATCAGCTT+TGG 0.322308 7_1:-78870885 Msa1041280:CDS
ATTCGTAGTAGCTCTCAAAA+AGG 0.328314 7_1:-78871284 Msa1041280:CDS
GTGAGCTTACTATTTCTATA+AGG 0.328318 7_1:+78870821 None:intergenic
AAAGACTTTGTTAAAGTTGA+AGG 0.329430 7_1:+78871961 None:intergenic
TATGGGTTCAGATGATAATA+TGG 0.330909 7_1:-78869520 Msa1041280:CDS
TCCAATTCCATTGGTCAAAC+TGG 0.332027 7_1:+78869425 None:intergenic
CAATGAAGTTCAAGATCTTA+AGG 0.338942 7_1:-78872228 Msa1041280:CDS
CTTTGATGTTATCGACCTAA+TGG 0.341928 7_1:-78871219 Msa1041280:CDS
CCATTCACCATAGGATTTAA+GGG 0.342936 7_1:+78873803 None:intergenic
TTCAAAGTAAAACCATAATA+AGG 0.346695 7_1:-78869848 Msa1041280:CDS
GTTATTAATAAGTTTCAATC+TGG 0.347218 7_1:-78874410 Msa1041280:CDS
AACAAATCTCTATCAGCTTT+GGG 0.352095 7_1:-78870884 Msa1041280:CDS
ATCGACTACTGCGGTCGTTA+AGG 0.352372 7_1:+78871159 None:intergenic
AAAACTTACCTAGTGAATCT+TGG 0.352438 7_1:+78870789 None:intergenic
CCATATTAATGCTATTAAAC+TGG 0.357809 7_1:+78869538 None:intergenic
ACCAGTTTGACCAATGGAAT+TGG 0.358423 7_1:-78869426 Msa1041280:CDS
TAGATTCTAAATCAAGATCT+TGG 0.361135 7_1:+78874666 None:intergenic
TGATGTTGAGTCTAATAAAA+TGG 0.362881 7_1:-78873625 Msa1041280:intron
AGCCATCTGAGGAAGAATTT+AGG 0.367354 7_1:-78874466 Msa1041280:CDS
TGCTTGACTGTTCATGTTCA+AGG 0.371291 7_1:-78871028 Msa1041280:CDS
ATATGTAATTACACAGATAA+TGG 0.375000 7_1:-78868997 Msa1041280:three_prime_UTR
TACCTTTGAGGCATCTGATC+TGG 0.378500 7_1:-78874033 Msa1041280:CDS
AAGATCTTGATTTAGAATCT+AGG 0.380130 7_1:-78874664 Msa1041280:CDS
CAAGGAAGAGATTTGACATC+TGG 0.382547 7_1:-78871010 Msa1041280:CDS
TTGTTTGTTAGGAAGTATTA+GGG 0.383586 7_1:-78872104 Msa1041280:intron
TGTCCCTTCCCATTCCTTGA+CGG 0.384622 7_1:+78871989 None:intergenic
CTCAATTGGTTTGGTTGTCC+AGG 0.388419 7_1:+78872055 None:intergenic
TCTATTGCGCTCAATTGGTT+TGG 0.389156 7_1:+78872046 None:intergenic
AGATTTATAATGAGCAAGTC+AGG 0.392020 7_1:-78871518 Msa1041280:CDS
TGGCTCTGCTGGTAAATCTT+TGG 0.392043 7_1:+78874484 None:intergenic
ACCTCCCATGAACATATTAT+AGG 0.394105 7_1:+78869563 None:intergenic
TCTTGTGCCCAAGGTCCATT+AGG 0.394275 7_1:+78871204 None:intergenic
TTAGGCTTGGTTTGAGAAGT+GGG 0.400672 7_1:-78874448 Msa1041280:CDS
GATCATGTTTCTGAAAGAAA+TGG 0.401768 7_1:-78872881 Msa1041280:CDS
TCCACACCTCTCTGTATTCA+TGG 0.403634 7_1:+78875169 None:intergenic
AAGAAACAGGTTCGGGAGAA+TGG 0.403758 7_1:-78869728 Msa1041280:CDS
GCATTTGTTGCTTCAGGTGT+TGG 0.408718 7_1:+78872644 None:intergenic
AACAAAACTGAGAACCTCTT+GGG 0.408906 7_1:-78869672 Msa1041280:CDS
CACCCGCGGATGCATGCATT+TGG 0.413899 7_1:-78870981 Msa1041280:CDS
GCTGATAATGGTGCTCCATC+AGG 0.413927 7_1:+78874116 None:intergenic
AAGCCAAGGTGTAAATTATA+GGG 0.415395 7_1:-78871616 Msa1041280:CDS
AAATACTGATATGCTGATAA+TGG 0.417406 7_1:+78874104 None:intergenic
GTTTCAGATTGCCAGTCTTA+AGG 0.417763 7_1:-78870397 Msa1041280:intron
TGAGCAAGTCAGGGATCTAT+TGG 0.418413 7_1:-78871508 Msa1041280:CDS
GAGAGGTGTGGAGCTAGGTT+CGG 0.422467 7_1:-78875158 Msa1041280:five_prime_UTR
CTCGCTGGTTTATGTGAAAA+GGG 0.422588 7_1:+78870289 None:intergenic
TCGACTACTGCGGTCGTTAA+GGG 0.434333 7_1:+78871160 None:intergenic
GCATATGGCCAAACAGGATC+AGG 0.437805 7_1:-78871769 Msa1041280:CDS
AGAGGTGTGGAGCTAGGTTC+GGG 0.440679 7_1:-78875157 Msa1041280:five_prime_UTR
CAGTTTAATAGCATTAATAT+GGG 0.441594 7_1:-78869537 Msa1041280:CDS
AATGAAGTTCAAGATCTTAA+GGG 0.441956 7_1:-78872227 Msa1041280:intron
ACTCGCTGGTTTATGTGAAA+AGG 0.442115 7_1:+78870288 None:intergenic
ACAGTCCTATAATATGTTCA+TGG 0.443352 7_1:-78869568 Msa1041280:CDS
TATCGCAAGCCAAGGTGAAC+AGG 0.445285 7_1:-78873080 Msa1041280:intron
TTAAATTGCCACAGCAAGTC+AGG 0.445396 7_1:+78869462 None:intergenic
CTGAGAACCTCTTGGGGTGT+TGG 0.448029 7_1:-78869665 Msa1041280:CDS
CCCTTAAATCCTATGGTGAA+TGG 0.448708 7_1:-78873803 Msa1041280:CDS
AATTGGACTTCCTACCTTTG+AGG 0.450741 7_1:-78874045 Msa1041280:CDS
ATGGTGAATGGAAACAAAAT+GGG 0.451671 7_1:-78873791 Msa1041280:CDS
TCATATGGTAGCAAAGAAAC+AGG 0.452737 7_1:-78872710 Msa1041280:CDS
ATATTTGCATATGGCCAAAC+AGG 0.454084 7_1:-78871775 Msa1041280:CDS
GTTTGGTTGTCCAGGAAAGA+AGG 0.456864 7_1:+78872063 None:intergenic
CGTTTCATGTCAACAGGAGC+TGG 0.457168 7_1:+78869166 None:intergenic
ATGCATTTGGTTGACTTAGC+AGG 0.458167 7_1:-78870968 Msa1041280:CDS
TCTTCCTCAGATGGCTCTGC+TGG 0.458725 7_1:+78874473 None:intergenic
TGTTAAAGAGCTCAAAGAAC+AGG 0.463247 7_1:-78870501 Msa1041280:intron
GAATAAGCATACTCAAAGAA+TGG 0.464427 7_1:+78873497 None:intergenic
GGATGACAAAGAAACAGGTT+CGG 0.470565 7_1:-78869736 Msa1041280:CDS
GGGCAGGATGACAAAGAAAC+AGG 0.472449 7_1:-78869741 Msa1041280:CDS
ACAGAGACAAGGCTTGCATC+TGG 0.474092 7_1:+78871251 None:intergenic
GATGACAAAGAAACAGGTTC+GGG 0.474981 7_1:-78869735 Msa1041280:CDS
TGGGTTTATTTCAGGAGGAC+AGG 0.478188 7_1:-78870701 Msa1041280:intron
GTCTTGGCCCTTAAATCCTA+TGG 0.478648 7_1:-78873810 Msa1041280:CDS
TGCCTCTTTCAGTCTATCTC+CGG 0.479382 7_1:+78870916 None:intergenic
AACAACAGATGCAACTGAAA+AGG 0.480503 7_1:+78874721 None:intergenic
AAACAAAACTGAGAACCTCT+TGG 0.480715 7_1:-78869673 Msa1041280:CDS
TTATCGACCTAATGGACCTT+GGG 0.485524 7_1:-78871211 Msa1041280:CDS
TGCCAGTCTTAAGGCAGCAT+TGG 0.487584 7_1:-78870388 Msa1041280:CDS
AATAAGCATACTCAAAGAAT+GGG 0.487974 7_1:+78873498 None:intergenic
TTCGGGAGAATGGGTTGATA+AGG 0.491034 7_1:-78869718 Msa1041280:CDS
TTTAGGGAGGGAAATCATCC+AGG 0.493635 7_1:-78873845 Msa1041280:intron
ACTCTTCACACCGCAAAAGC+TGG 0.495298 7_1:-78872494 Msa1041280:CDS
TTAGTATTCCGTCAAGGAAT+GGG 0.496444 7_1:-78871997 Msa1041280:CDS
GGCAAGAAAAGAAGGTGAAT+CGG 0.496869 7_1:-78870367 Msa1041280:CDS
AGAAACAGGTTCGGGAGAAT+GGG 0.499142 7_1:-78869727 Msa1041280:CDS
CAGGATTGTGAATTGCGTCT+TGG 0.500079 7_1:-78873826 Msa1041280:CDS
GAAGAGAAAGAGTAGCTAAG+TGG 0.500106 7_1:-78875208 Msa1041280:five_prime_UTR
GTTGCAGGAACGCACATTCG+TGG 0.501152 7_1:-78872308 Msa1041280:intron
AGCCTTTGTTCCAATTCCAT+TGG 0.501916 7_1:+78869416 None:intergenic
AGATGCAACTGAAAAGGAAA+AGG 0.502085 7_1:+78874727 None:intergenic
CATGATATAAGCAAAGCAAC+GGG 0.504016 7_1:+78868964 None:intergenic
TTTGTTCAAGACTATTTACC+GGG 0.505597 7_1:+78869769 None:intergenic
TGGAAACAAAATGGGGCAAA+TGG 0.509404 7_1:-78873783 Msa1041280:CDS
GTTAGTATTCCGTCAAGGAA+TGG 0.510388 7_1:-78871998 Msa1041280:CDS
GGGATCAGTGCAGAATCAAC+AGG 0.511317 7_1:+78874137 None:intergenic
TAATAAGTGGTTGCATATCA+AGG 0.512193 7_1:+78871827 None:intergenic
TGCCAATGCTGCCTTAAGAC+TGG 0.513813 7_1:+78870386 None:intergenic
TCTAGAAGATATGAAGCGGC+AGG 0.514962 7_1:-78874539 Msa1041280:CDS
GATTCTGCACTGATCCCTGA+TGG 0.516963 7_1:-78874131 Msa1041280:CDS
TCAAGAACAGATCTAATAAG+TGG 0.519044 7_1:+78871814 None:intergenic
GTCAGGTTCTGAGGAATCAC+TGG 0.520304 7_1:+78869479 None:intergenic
TTTAGGCTTGGTTTGAGAAG+TGG 0.524815 7_1:-78874449 Msa1041280:CDS
GGGCACAAGAACCGTGTAGT+TGG 0.526196 7_1:-78871191 Msa1041280:CDS
GGTGGAGAACAAGATTCATA+TGG 0.526554 7_1:-78872725 Msa1041280:CDS
CTTCTTTGTTTCCTTCACCT+CGG 0.529608 7_1:-78874855 Msa1041280:five_prime_UTR
CACCAGTGTCTGCAACTCGC+TGG 0.530531 7_1:+78870274 None:intergenic
GCAGCATTGGCAAGAAAAGA+AGG 0.530974 7_1:-78870375 Msa1041280:CDS
TCTGAGGAAGAATTTAGGCT+TGG 0.531198 7_1:-78874461 Msa1041280:CDS
TTTGAACATAAACATCATAG+TGG 0.532899 7_1:+78871547 None:intergenic
GCAATAGAAAATATAGAAGA+TGG 0.533994 7_1:-78872031 Msa1041280:CDS
ACCGCAGTAGTCGATCTCAT+AGG 0.535285 7_1:-78871151 Msa1041280:intron
CAACTTCAACCATTGGTCGC+CGG 0.536616 7_1:+78870238 None:intergenic
AACCAAATGCATGCATCCGC+GGG 0.536868 7_1:+78870979 None:intergenic
CACCGGAGATAGACTGAAAG+AGG 0.537444 7_1:-78870918 Msa1041280:CDS
CGGCGACCAATGGTTGAAGT+TGG 0.538760 7_1:-78870237 Msa1041280:CDS
GAAGAAAGTATCCGAGGTGA+AGG 0.539176 7_1:+78874844 None:intergenic
TCAATCTGGAGCTGTTCCTA+AGG 0.539434 7_1:-78874396 Msa1041280:intron
AGAATGGGTTGATAAGGTAA+TGG 0.545201 7_1:-78869712 Msa1041280:CDS
AAATTCACCGCCATGGCCCC+CGG 0.545543 7_1:-78869787 Msa1041280:CDS
CTGATAATGGTGCTCCATCA+GGG 0.547638 7_1:+78874117 None:intergenic
CAAGACGCAATTCACAATCC+TGG 0.552813 7_1:+78873827 None:intergenic
AAGTGAGAGGGTAGATAAGT+CGG 0.553060 7_1:-78870945 Msa1041280:CDS
GATTGTTTCAACGAAGGTGA+AGG 0.553428 7_1:+78869220 None:intergenic
GAGCCCTATAATTTACACCT+TGG 0.555325 7_1:+78871613 None:intergenic
AATGTGTGCATATTTGCATA+TGG 0.555691 7_1:-78871784 Msa1041280:CDS
AAGCTTACCAGTTTGACCAA+TGG 0.556020 7_1:-78869432 Msa1041280:CDS
CTAAACTAACTAACAAGGAA+AGG 0.556023 7_1:-78874992 Msa1041280:five_prime_UTR
AGGGATCTATTGGTCACTGA+TGG 0.556969 7_1:-78871498 Msa1041280:CDS
TATGATAGCAGATCAAAGAA+AGG 0.558143 7_1:-78871577 Msa1041280:CDS
GTTATCGACCTAATGGACCT+TGG 0.558881 7_1:-78871212 Msa1041280:CDS
AAAGTTGTCTCACATAGGAC+AGG 0.559751 7_1:-78869196 Msa1041280:CDS
TCTAGGAAAGCTGAACAAGC+TGG 0.560323 7_1:-78874647 Msa1041280:intron
AGAGTTGCTACAGTTGAACT+TGG 0.560508 7_1:-78870554 Msa1041280:CDS
CTGGTGATCAGCTTGGATGC+CGG 0.560769 7_1:-78870257 Msa1041280:CDS
GCTTGGATGCCGGCGACCAA+TGG 0.561212 7_1:-78870247 Msa1041280:CDS
GGTGTTGGCAAGAAAGCAAT+GGG 0.561304 7_1:-78869650 Msa1041280:CDS
TCATGATATAAGCAAAGCAA+CGG 0.562742 7_1:+78868963 None:intergenic
CCACAGCAAGTCAGGTTCTG+AGG 0.563635 7_1:+78869470 None:intergenic
ATGTTGCCAACTTCAACCAT+TGG 0.564604 7_1:+78870231 None:intergenic
GGTTGAAGTTGGCAACATTG+AGG 0.565668 7_1:-78870226 Msa1041280:intron
TTTGGTTGTCCAGGAAAGAA+GGG 0.566382 7_1:+78872064 None:intergenic
GTAGATAAGTCGGAGGCCAC+CGG 0.567468 7_1:-78870935 Msa1041280:CDS
AGCCTAAATTCTTCCTCAGA+TGG 0.567872 7_1:+78874464 None:intergenic
CAACCAAATGCATGCATCCG+CGG 0.568092 7_1:+78870978 None:intergenic
TTCCAGATCAGATGCCTCAA+AGG 0.568182 7_1:+78874031 None:intergenic
ATACAGAGAGGTGTGGAGCT+AGG 0.570550 7_1:-78875163 Msa1041280:five_prime_UTR
CATTTACTAATTCCTTGTCA+AGG 0.572600 7_1:-78873689 Msa1041280:CDS
AAAATCAAATAACTGATGAA+AGG 0.574754 7_1:+78871459 None:intergenic
CAGTCCTATAATATGTTCAT+GGG 0.576985 7_1:-78869567 Msa1041280:CDS
GGCTATGAGATCTGTCTCAA+AGG 0.578257 7_1:-78869397 Msa1041280:CDS
AATGGTGTGTGGAAATTTGG+TGG 0.578409 7_1:-78873765 Msa1041280:CDS
GGGTGTTGGCAAGAAAGCAA+TGG 0.578650 7_1:-78869651 Msa1041280:CDS
CTTCTAGTTAATGGCATCAG+AGG 0.578892 7_1:-78874753 Msa1041280:exon
TCTTGAACAAAACGACGGGC+AGG 0.583057 7_1:-78869757 Msa1041280:CDS
CAACATGTGCTTCAACAACA+TGG 0.594556 7_1:-78874698 Msa1041280:CDS
CTCTTTCAGTCTATCTCCGG+TGG 0.596575 7_1:+78870919 None:intergenic
ATGCTGCAGAGTCTCATACA+TGG 0.597735 7_1:+78874791 None:intergenic
CCTCAGAACCTGACTTGCTG+TGG 0.597945 7_1:-78869470 Msa1041280:CDS
GAGATCACAGAGAAAAGCCA+AGG 0.602382 7_1:-78871630 Msa1041280:CDS
CTACACGGTTCTTGTGCCCA+AGG 0.603341 7_1:+78871195 None:intergenic
AGATCAGATGCCTCAAAGGT+AGG 0.603851 7_1:+78874035 None:intergenic
TGGTTTATGTGAAAAGGGGA+TGG 0.606456 7_1:+78870294 None:intergenic
TTCAGATGATAATATGGATG+AGG 0.609293 7_1:-78869514 Msa1041280:CDS
CATTAGGTCGATAACATCAA+AGG 0.610138 7_1:+78871220 None:intergenic
GCAGACACTGGTGATCAGCT+TGG 0.610140 7_1:-78870264 Msa1041280:CDS
TTTGGACCATCTGCTACCCA+AGG 0.610469 7_1:-78871941 Msa1041280:intron
GATTGATGAGGTCCTTGACA+AGG 0.610670 7_1:+78873677 None:intergenic
TTGACTTAGCAGGAAGTGAG+AGG 0.611702 7_1:-78870958 Msa1041280:CDS
AACCAACCTTGGGTAGCAGA+TGG 0.611838 7_1:+78871935 None:intergenic
AGAGTCATACCTGTTCACCT+TGG 0.611893 7_1:+78873071 None:intergenic
TTTCTTGCCAACACCCCAAG+AGG 0.612734 7_1:+78869658 None:intergenic
GAAGCAAGATGAAATTCCAA+TGG 0.613204 7_1:-78873455 Msa1041280:intron
TAACAAGGAAAGGAAAGGAA+AGG 0.614251 7_1:-78874982 Msa1041280:five_prime_UTR
ATAGTCTTGAACAAAACGAC+GGG 0.616141 7_1:-78869761 Msa1041280:CDS
AGCATCTAGAAGATATGAAG+CGG 0.618012 7_1:-78874543 Msa1041280:CDS
GACCAATGGAATTGGAACAA+AGG 0.618745 7_1:-78869418 Msa1041280:CDS
AACCAGCGAGTTGCAGACAC+TGG 0.619226 7_1:-78870276 Msa1041280:CDS
GAGAGAGAAGAAAGTATCCG+AGG 0.620047 7_1:+78874838 None:intergenic
AGATTCTTCCAAAATGTACT+CGG 0.623425 7_1:-78869592 Msa1041280:CDS
TATTCCGTCAAGGAATGGGA+AGG 0.624060 7_1:-78871993 Msa1041280:CDS
GGGCGGTTGCTCCAACTACA+CGG 0.624795 7_1:+78871180 None:intergenic
CTAACTAACAAGGAAAGGAA+AGG 0.626504 7_1:-78874987 Msa1041280:five_prime_UTR
TCCTATAATATGTTCATGGG+AGG 0.627345 7_1:-78869564 Msa1041280:CDS
GATTTATAATGAGCAAGTCA+GGG 0.628089 7_1:-78871517 Msa1041280:CDS
AATCAAAAGTTGTCTCACAT+AGG 0.628767 7_1:-78869201 Msa1041280:CDS
AAAGAATCGTGTGGCCGCTG+AGG 0.629056 7_1:-78872677 Msa1041280:CDS
TATCAACAAATTCACCGCCA+TGG 0.629315 7_1:-78869794 Msa1041280:CDS
GAACATCGTATCGCAAGCCA+AGG 0.635091 7_1:-78873088 Msa1041280:CDS
TGACTTAGCAGGAAGTGAGA+GGG 0.635464 7_1:-78870957 Msa1041280:CDS
TTGTCTCACATAGGACAGGA+AGG 0.639838 7_1:-78869192 Msa1041280:CDS
CAAATGCATGCATCCGCGGG+TGG 0.640635 7_1:+78870982 None:intergenic
ACAAAACTGAGAACCTCTTG+GGG 0.642295 7_1:-78869671 Msa1041280:CDS
ACATCTGGAGCTACCACCCG+CGG 0.643390 7_1:-78870995 Msa1041280:CDS
CAATTGCTCCAAGATTCACT+AGG 0.648069 7_1:-78870797 Msa1041280:intron
AGGTTGATGACACAGAGACA+AGG 0.648325 7_1:+78871240 None:intergenic
TCGCTGGTTTATGTGAAAAG+GGG 0.649546 7_1:+78870290 None:intergenic
ATATGTTTGATGAAATGACT+CGG 0.650130 7_1:+78869620 None:intergenic
GCTGCTCGAGTAAACAAAGA+TGG 0.650336 7_1:-78870530 Msa1041280:CDS
ATTCCGTCAAGGAATGGGAA+GGG 0.654270 7_1:-78871992 Msa1041280:CDS
AACAACTAAACTAACTAACA+AGG 0.655705 7_1:-78874997 Msa1041280:five_prime_UTR
AAAATGGGGCAAATGGTGTG+TGG 0.658100 7_1:-78873776 Msa1041280:CDS
CTAGAAGATATGAAGCGGCA+GGG 0.665445 7_1:-78874538 Msa1041280:CDS
TCACAGTTAGTATTCCGTCA+AGG 0.670146 7_1:-78872003 Msa1041280:CDS
ATCTGCATCAAAGTTTATGG+TGG 0.670317 7_1:-78872858 Msa1041280:CDS
TTTACCAGCAGAGCCATCTG+AGG 0.671319 7_1:-78874477 Msa1041280:CDS
TGAGAGGGTAGATAAGTCGG+AGG 0.671871 7_1:-78870942 Msa1041280:CDS
AATAGTCTTGAACAAAACGA+CGG 0.673164 7_1:-78869762 Msa1041280:CDS
TTGGCTTTGCAATTCCTCAG+CGG 0.674247 7_1:+78872663 None:intergenic
GCCATGAATACAGAGAGGTG+TGG 0.675952 7_1:-78875170 Msa1041280:five_prime_UTR
ACTACTGCGGTCGTTAAGGG+CGG 0.677690 7_1:+78871163 None:intergenic
TGGTGAATGGAAACAAAATG+GGG 0.686265 7_1:-78873790 Msa1041280:CDS
TCACATTGAAAAGAATCGTG+TGG 0.686699 7_1:-78872686 Msa1041280:CDS
TTGTTCAAGACTATTTACCG+GGG 0.689065 7_1:+78869770 None:intergenic
TGTTCAAGACTATTTACCGG+GGG 0.689769 7_1:+78869771 None:intergenic
CTGCAGAGTCTCATACATGG+AGG 0.714384 7_1:+78874794 None:intergenic
GAAGATATGAAGCGGCAGGG+TGG 0.729025 7_1:-78874535 Msa1041280:CDS
ACCTATGAGATCGACTACTG+CGG 0.755142 7_1:+78871150 None:intergenic
CACGCGCCATGAATACAGAG+AGG 0.755271 7_1:-78875175 Msa1041280:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGTTATTATAAGTTAAT+AGG + chr7_1:78870951-78870970 None:intergenic 10.0%
!! TATTATTATTCTGAATGAAA+TGG - chr7_1:78869636-78869655 Msa1041280:CDS 15.0%
!!! TTTCTGAAAAAATTAAAATG+TGG + chr7_1:78870903-78870922 None:intergenic 15.0%
!!! TTATGTTCTAGTAATTTTTA+AGG + chr7_1:78872833-78872852 None:intergenic 15.0%
!!! TTTTCACTTCAATTATATTT+AGG - chr7_1:78873787-78873806 Msa1041280:CDS 15.0%
!! TATTATAAATTGAAAACTTG+TGG - chr7_1:78874203-78874222 Msa1041280:intron 15.0%
!! TTAATATCCAATAAATAGTT+AGG + chr7_1:78874933-78874952 None:intergenic 15.0%
!! CTTCTTCTGTATAAAAAAAA+TGG + chr7_1:78869128-78869147 None:intergenic 20.0%
!!! AAAAAAAAGGTGATGAATTT+TGG - chr7_1:78869203-78869222 Msa1041280:CDS 20.0%
!! GTTATTAATAAGTTTCAATC+TGG - chr7_1:78869814-78869833 Msa1041280:CDS 20.0%
!! TTCACTCAATTAAATGAAAT+AGG + chr7_1:78869869-78869888 None:intergenic 20.0%
!!! TCAATATTTCTAATCTATCA+GGG + chr7_1:78869951-78869970 None:intergenic 20.0%
!!! ATCAATATTTCTAATCTATC+AGG + chr7_1:78869952-78869971 None:intergenic 20.0%
!!! TATTTTTTTGTCTAAACTCT+AGG + chr7_1:78870036-78870055 None:intergenic 20.0%
!!! ATTATTTTTGTTTTAGGTTG+TGG - chr7_1:78870059-78870078 Msa1041280:intron 20.0%
!!! TAGTAATGTCATTAGTTTAA+GGG - chr7_1:78871186-78871205 Msa1041280:CDS 20.0%
!! TTGTCGTGAAAATAAATTTA+AGG + chr7_1:78871268-78871287 None:intergenic 20.0%
!! CATTGATATTATGATTGATT+AGG - chr7_1:78871478-78871497 Msa1041280:CDS 20.0%
!!! TTTTTTTTTTGTTTTGTTGC+AGG - chr7_1:78871901-78871920 Msa1041280:intron 20.0%
!! AAAATCAAATAACTGATGAA+AGG + chr7_1:78872768-78872787 None:intergenic 20.0%
!! AAAAGATTATATATACCTTC+AGG - chr7_1:78872797-78872816 Msa1041280:intron 20.0%
!! ATTACTAGAACATAAGAAAT+TGG - chr7_1:78872838-78872857 Msa1041280:intron 20.0%
!!! CATTTTAATTCTCATAATGT+TGG - chr7_1:78873500-78873519 Msa1041280:CDS 20.0%
!!! TTCATAGAGTAAAACTATTT+TGG - chr7_1:78874301-78874320 Msa1041280:intron 20.0%
!! TTCAAAGTAAAACCATAATA+AGG - chr7_1:78874376-78874395 Msa1041280:intron 20.0%
!! CAGTTTAATAGCATTAATAT+GGG - chr7_1:78874687-78874706 Msa1041280:CDS 20.0%
!!! TTTTATATTACCTCAATTCT+TGG + chr7_1:78874863-78874882 None:intergenic 20.0%
!! GAATTGAGGTAATATAAAAA+TGG - chr7_1:78874864-78874883 Msa1041280:five_prime_UTR 20.0%
!! ATATGTAATTACACAGATAA+TGG - chr7_1:78875227-78875246 Msa1041280:five_prime_UTR 20.0%
!!! TTTTATACTGTAGCATTTAA+AGG - chr7_1:78875293-78875312 Msa1041280:five_prime_UTR 20.0%
! TTGTGTAGAGAGTAAAAAAA+AGG - chr7_1:78869190-78869209 Msa1041280:CDS 25.0%
! AACAACTAAACTAACTAACA+AGG - chr7_1:78869227-78869246 Msa1041280:CDS 25.0%
!! TAATAGTGACTTCTAGTTAA+TGG - chr7_1:78869462-78869481 Msa1041280:CDS 25.0%
! TAGATTCTAAATCAAGATCT+TGG + chr7_1:78869561-78869580 None:intergenic 25.0%
!! AAGATCTTGATTTAGAATCT+AGG - chr7_1:78869560-78869579 Msa1041280:CDS 25.0%
! AAATACTGATATGCTGATAA+TGG + chr7_1:78870123-78870142 None:intergenic 25.0%
!!! ATCAGTATTTTGAAAATGTG+AGG - chr7_1:78870133-78870152 Msa1041280:intron 25.0%
!!! TTATTATGCTGCTGATTTTT+AGG - chr7_1:78870362-78870381 Msa1041280:CDS 25.0%
!!! TATTATGCTGCTGATTTTTA+GGG - chr7_1:78870363-78870382 Msa1041280:CDS 25.0%
!!! AGTTTTTTCATTGATTGATG+AGG + chr7_1:78870562-78870581 None:intergenic 25.0%
! ATCAATCAATGAAAAAACTC+TGG - chr7_1:78870563-78870582 Msa1041280:intron 25.0%
! TGATGTTGAGTCTAATAAAA+TGG - chr7_1:78870599-78870618 Msa1041280:intron 25.0%
! AATAAGCATACTCAAAGAAT+GGG + chr7_1:78870729-78870748 None:intergenic 25.0%
! AAAGTTATGATGAACTTGAT+TGG + chr7_1:78870857-78870876 None:intergenic 25.0%
!!! TTGGATTAGTTTTTAGCTTT+TGG + chr7_1:78871006-78871025 None:intergenic 25.0%
! AAACTAATGACATTACTAGA+AGG + chr7_1:78871184-78871203 None:intergenic 25.0%
!! CTAGTAATGTCATTAGTTTA+AGG - chr7_1:78871185-78871204 Msa1041280:CDS 25.0%
!! AGTAATGTCATTAGTTTAAG+GGG - chr7_1:78871187-78871206 Msa1041280:CDS 25.0%
! AAATAGAACAGAATATTGAC+CGG + chr7_1:78871218-78871237 None:intergenic 25.0%
! GAAAATTATTCTCAAGAATG+AGG + chr7_1:78871246-78871265 None:intergenic 25.0%
!!! AGAATTTTCAAGCTTAATTG+AGG + chr7_1:78871441-78871460 None:intergenic 25.0%
! TGATATTATGATTGATTAGG+TGG - chr7_1:78871481-78871500 Msa1041280:CDS 25.0%
!!! TTTCGCTTTTCATATTTTGT+AGG - chr7_1:78871696-78871715 Msa1041280:intron 25.0%
! AATGAAGTTCAAGATCTTAA+GGG - chr7_1:78871997-78872016 Msa1041280:CDS 25.0%
! AAACCTTACAAAGATATGAA+TGG + chr7_1:78872064-78872083 None:intergenic 25.0%
!!! TTTGTTTGTTAGGAAGTATT+AGG - chr7_1:78872119-78872138 Msa1041280:intron 25.0%
!!! TTGTTTGTTAGGAAGTATTA+GGG - chr7_1:78872120-78872139 Msa1041280:intron 25.0%
! GCAATAGAAAATATAGAAGA+TGG - chr7_1:78872193-78872212 Msa1041280:intron 25.0%
! AAAGACTTTGTTAAAGTTGA+AGG + chr7_1:78872266-78872285 None:intergenic 25.0%
! TTCAACTTTAACAAAGTCTT+TGG - chr7_1:78872265-78872284 Msa1041280:CDS 25.0%
!!! TTTTTTGTGAGCAATAAACT+TGG - chr7_1:78872511-78872530 Msa1041280:intron 25.0%
! TTTGAACATAAACATCATAG+TGG + chr7_1:78872680-78872699 None:intergenic 25.0%
! TCTAATGTGTTAATGGTTAA+GGG + chr7_1:78872919-78872938 None:intergenic 25.0%
! TTCTAATGTGTTAATGGTTA+AGG + chr7_1:78872920-78872939 None:intergenic 25.0%
! ACGAATTTCTAATGTGTTAA+TGG + chr7_1:78872926-78872945 None:intergenic 25.0%
! AAAATGAATTGTATCATACC+AGG + chr7_1:78873486-78873505 None:intergenic 25.0%
! TTTAATTCTCATAATGTTGG+TGG - chr7_1:78873503-78873522 Msa1041280:CDS 25.0%
! TTAATTCTCATAATGTTGGT+GGG - chr7_1:78873504-78873523 Msa1041280:CDS 25.0%
! ATTATGATAAAGAACTAGAG+AGG + chr7_1:78873766-78873785 None:intergenic 25.0%
! TTCTCTACACTAAAAATAGA+GGG + chr7_1:78874084-78874103 None:intergenic 25.0%
!! TTTTGTTCAAGACTATTTAC+CGG + chr7_1:78874459-78874478 None:intergenic 25.0%
! ATATGTTTGATGAAATGACT+CGG + chr7_1:78874607-78874626 None:intergenic 25.0%
! CCATATTAATGCTATTAAAC+TGG + chr7_1:78874689-78874708 None:intergenic 25.0%
! CCAGTTTAATAGCATTAATA+TGG - chr7_1:78874686-78874705 Msa1041280:CDS 25.0%
! TTCTTTGCCTAACTATTTAT+TGG - chr7_1:78874923-78874942 Msa1041280:five_prime_UTR 25.0%
!!! AGTTTTTTTCATTCTTCTCT+TGG - chr7_1:78874980-78874999 Msa1041280:five_prime_UTR 25.0%
! TGCTATAATTTCTCTATCTT+TGG - chr7_1:78875189-78875208 Msa1041280:five_prime_UTR 25.0%
! CAATGAAAAATCATTACAGT+GGG + chr7_1:78875330-78875349 None:intergenic 25.0%
! TCAATGAAAAATCATTACAG+TGG + chr7_1:78875331-78875350 None:intergenic 25.0%
CTAAACTAACTAACAAGGAA+AGG - chr7_1:78869232-78869251 Msa1041280:CDS 30.0%
TAAATGAAATAGGATCTAGC+TGG + chr7_1:78869859-78869878 None:intergenic 30.0%
TTTAATTGAGTGAACTCAAC+TGG - chr7_1:78869875-78869894 Msa1041280:intron 30.0%
ATACATTACTCATCTTCTGA+CGG - chr7_1:78869973-78869992 Msa1041280:intron 30.0%
! TGAAAATGTGAGGAATTTTC+TGG - chr7_1:78870143-78870162 Msa1041280:intron 30.0%
!! TGTTATTTGTTGATAACTCC+AGG - chr7_1:78870301-78870320 Msa1041280:CDS 30.0%
!! TGAAGTTCTAAAAGTATACC+TGG + chr7_1:78870322-78870341 None:intergenic 30.0%
!! ATTTTGTTTCCATTCACCAT+AGG + chr7_1:78870433-78870452 None:intergenic 30.0%
TATGGTGAATGGAAACAAAA+TGG - chr7_1:78870432-78870451 Msa1041280:intron 30.0%
ATGGTGAATGGAAACAAAAT+GGG - chr7_1:78870433-78870452 Msa1041280:intron 30.0%
! AGAGATTTTGCAGAAATAGT+AGG + chr7_1:78870495-78870514 None:intergenic 30.0%
ATCTCTTGTGAGAAAAAACT+CGG - chr7_1:78870509-78870528 Msa1041280:CDS 30.0%
CTTGACAAGGAATTAGTAAA+TGG + chr7_1:78870537-78870556 None:intergenic 30.0%
CATTTACTAATTCCTTGTCA+AGG - chr7_1:78870535-78870554 Msa1041280:CDS 30.0%
GTTGAGTCTAATAAAATGGT+AGG - chr7_1:78870603-78870622 Msa1041280:intron 30.0%
TATCAATTCACCTTGTTGAA+CGG - chr7_1:78870655-78870674 Msa1041280:intron 30.0%
!!! ACATTTCTATTTTTGCAGTC+TGG - chr7_1:78870701-78870720 Msa1041280:intron 30.0%
GAATAAGCATACTCAAAGAA+TGG + chr7_1:78870730-78870749 None:intergenic 30.0%
GAAGCTAATTTCAACTTGAT+TGG + chr7_1:78870881-78870900 None:intergenic 30.0%
GCTAAAAACTAATCCAATCT+AGG - chr7_1:78871009-78871028 Msa1041280:CDS 30.0%
CTTAAAAACTAGCAGTTTCA+AGG + chr7_1:78871048-78871067 None:intergenic 30.0%
! AATACTTTTCTTCTTCTGCA+TGG - chr7_1:78871069-78871088 Msa1041280:intron 30.0%
!! GGTTGAATCTGTTTTGAATA+AGG - chr7_1:78871099-78871118 Msa1041280:intron 30.0%
TGTCTGTAAGTTACAAGATA+AGG + chr7_1:78871308-78871327 None:intergenic 30.0%
! GATCATGTTTCTGAAAGAAA+TGG - chr7_1:78871343-78871362 Msa1041280:intron 30.0%
! TCTGGAATATGTTAATCTCA+AGG + chr7_1:78871417-78871436 None:intergenic 30.0%
TCATAAATCCTTACCAAGAT+TGG + chr7_1:78871794-78871813 None:intergenic 30.0%
CAATGAAGTTCAAGATCTTA+AGG - chr7_1:78871996-78872015 Msa1041280:CDS 30.0%
CTTCCATTCATATCTTTGTA+AGG - chr7_1:78872058-78872077 Msa1041280:CDS 30.0%
TGCATCCAATAATTGTATCA+AGG - chr7_1:78872088-78872107 Msa1041280:CDS 30.0%
ATCCAATAATTGTATCAAGG+TGG - chr7_1:78872091-78872110 Msa1041280:CDS 30.0%
TCCAATAATTGTATCAAGGT+GGG - chr7_1:78872092-78872111 Msa1041280:CDS 30.0%
! TATTTTCTATTGCGCTCAAT+TGG + chr7_1:78872186-78872205 None:intergenic 30.0%
TCACACAAAAATACAAATCC+TGG + chr7_1:78872343-78872362 None:intergenic 30.0%
AATTTAATCTCGTATTGCAG+CGG - chr7_1:78872367-78872386 Msa1041280:intron 30.0%
TAATAAGTGGTTGCATATCA+AGG + chr7_1:78872400-78872419 None:intergenic 30.0%
TCAAGAACAGATCTAATAAG+TGG + chr7_1:78872413-78872432 None:intergenic 30.0%
CTTATTAGATCTGTTCTTGA+TGG - chr7_1:78872413-78872432 Msa1041280:intron 30.0%
AATGTGTGCATATTTGCATA+TGG - chr7_1:78872440-78872459 Msa1041280:intron 30.0%
ATCAGGAAAAACTTACACAA+TGG - chr7_1:78872472-78872491 Msa1041280:CDS 30.0%
GAAAAACTTACACAATGGTA+AGG - chr7_1:78872477-78872496 Msa1041280:CDS 30.0%
! TATGTTTTTCACATGTAGAC+TGG - chr7_1:78872564-78872583 Msa1041280:intron 30.0%
AAAGCCAAGGTGTAAATTAT+AGG - chr7_1:78872607-78872626 Msa1041280:intron 30.0%
AAGCCAAGGTGTAAATTATA+GGG - chr7_1:78872608-78872627 Msa1041280:intron 30.0%
TATGATAGCAGATCAAAGAA+AGG - chr7_1:78872647-78872666 Msa1041280:CDS 30.0%
AGATTTATAATGAGCAAGTC+AGG - chr7_1:78872706-78872725 Msa1041280:CDS 30.0%
GATTTATAATGAGCAAGTCA+GGG - chr7_1:78872707-78872726 Msa1041280:CDS 30.0%
CAAAATAGGAGAGAATAACA+GGG + chr7_1:78873115-78873134 None:intergenic 30.0%
TGAAATACCATCACCAAAAT+AGG + chr7_1:78873129-78873148 None:intergenic 30.0%
!!! ATTTTGGTGATGGTATTTCA+TGG - chr7_1:78873129-78873148 Msa1041280:CDS 30.0%
TGATGGTATTTCATGGAAAA+AGG - chr7_1:78873136-78873155 Msa1041280:intron 30.0%
TAACAAATCTCTATCAGCTT+TGG - chr7_1:78873339-78873358 Msa1041280:intron 30.0%
AACAAATCTCTATCAGCTTT+GGG - chr7_1:78873340-78873359 Msa1041280:intron 30.0%
! ATGTGAGTTTTTATGAGCAA+GGG + chr7_1:78873380-78873399 None:intergenic 30.0%
!! GTGAGCTTACTATTTCTATA+AGG + chr7_1:78873406-78873425 None:intergenic 30.0%
AAAACTTACCTAGTGAATCT+TGG + chr7_1:78873438-78873457 None:intergenic 30.0%
!!! CTAGGTAAGTTTTAAGAAGT+TGG - chr7_1:78873445-78873464 Msa1041280:intron 30.0%
! CTCTGAAAAATATAGGACAA+AGG - chr7_1:78873899-78873918 Msa1041280:intron 30.0%
! CATCAAATCATTTTGCACAT+TGG + chr7_1:78874042-78874061 None:intergenic 30.0%
GTTCTCTACACTAAAAATAG+AGG + chr7_1:78874085-78874104 None:intergenic 30.0%
TCAACTACCTTAAATTGTCT+AGG - chr7_1:78874162-78874181 Msa1041280:intron 30.0%
GTTTGTTCCTAGACAATTTA+AGG + chr7_1:78874172-78874191 None:intergenic 30.0%
AGAACATTTCATGTATTGCT+TGG + chr7_1:78874230-78874249 None:intergenic 30.0%
TAAATCCAATGAGTTCAACA+CGG + chr7_1:78874338-78874357 None:intergenic 30.0%
!! TTGAGTTTTCTGCCTTATTA+TGG + chr7_1:78874391-78874410 None:intergenic 30.0%
TTTGTTCAAGACTATTTACC+GGG + chr7_1:78874458-78874477 None:intergenic 30.0%
! AATAGTCTTGAACAAAACGA+CGG - chr7_1:78874462-78874481 Msa1041280:CDS 30.0%
!! AGTACATTTTGGAAGAATCT+TGG + chr7_1:78874632-78874651 None:intergenic 30.0%
AGATTCTTCCAAAATGTACT+CGG - chr7_1:78874632-78874651 Msa1041280:intron 30.0%
ACAGTCCTATAATATGTTCA+TGG - chr7_1:78874656-78874675 Msa1041280:CDS 30.0%
CAGTCCTATAATATGTTCAT+GGG - chr7_1:78874657-78874676 Msa1041280:CDS 30.0%
TATGGGTTCAGATGATAATA+TGG - chr7_1:78874704-78874723 Msa1041280:CDS 30.0%
TTCAGATGATAATATGGATG+AGG - chr7_1:78874710-78874729 Msa1041280:CDS 30.0%
!! ACTTTTGATTGTTTCAACGA+AGG + chr7_1:78875013-78875032 None:intergenic 30.0%
AATCAAAAGTTGTCTCACAT+AGG - chr7_1:78875023-78875042 Msa1041280:five_prime_UTR 30.0%
! ATTTTACGTTTCATGTCAAC+AGG + chr7_1:78875067-78875086 None:intergenic 30.0%
GTTGACATGAAACGTAAAAT+TGG - chr7_1:78875067-78875086 Msa1041280:five_prime_UTR 30.0%
TCATGATATAAGCAAAGCAA+CGG + chr7_1:78875264-78875283 None:intergenic 30.0%
CTAACTAACAAGGAAAGGAA+AGG - chr7_1:78869237-78869256 Msa1041280:CDS 35.0%
TAACAAGGAAAGGAAAGGAA+AGG - chr7_1:78869242-78869261 Msa1041280:CDS 35.0%
AGATGCAACTGAAAAGGAAA+AGG + chr7_1:78869500-78869519 None:intergenic 35.0%
AACAACAGATGCAACTGAAA+AGG + chr7_1:78869506-78869525 None:intergenic 35.0%
AGCATCTAGAAGATATGAAG+CGG - chr7_1:78869681-78869700 Msa1041280:CDS 35.0%
CACTTATAGTCGAATTGATC+AGG - chr7_1:78869909-78869928 Msa1041280:intron 35.0%
AATCTATCAGGGAACAAACT+CGG + chr7_1:78869940-78869959 None:intergenic 35.0%
TATTAGAGTCTCTTTCCCTT+AGG - chr7_1:78870008-78870027 Msa1041280:intron 35.0%
TCTAAACTCTAGGTTCCTAA+GGG + chr7_1:78870026-78870045 None:intergenic 35.0%
! AAATGTGAGGAATTTTCTGG+TGG - chr7_1:78870146-78870165 Msa1041280:intron 35.0%
CCATTCACCATAGGATTTAA+GGG + chr7_1:78870424-78870443 None:intergenic 35.0%
TCCATTCACCATAGGATTTA+AGG + chr7_1:78870425-78870444 None:intergenic 35.0%
TGGTGAATGGAAACAAAATG+GGG - chr7_1:78870434-78870453 Msa1041280:intron 35.0%
CTTATTCTTTCCGTTCAACA+AGG + chr7_1:78870668-78870687 None:intergenic 35.0%
GAAGCAAGATGAAATTCCAA+TGG - chr7_1:78870769-78870788 Msa1041280:intron 35.0%
! GAAGTTCTGATGAAATTCAG+TGG + chr7_1:78870833-78870852 None:intergenic 35.0%
AGTTTCAAGGAAAGAGACTT+AGG + chr7_1:78871035-78871054 None:intergenic 35.0%
TGGATCTGCATCAAAGTTTA+TGG - chr7_1:78871363-78871382 Msa1041280:intron 35.0%
ATCTGCATCAAAGTTTATGG+TGG - chr7_1:78871366-78871385 Msa1041280:intron 35.0%
GTTTATGGTGGCAGATAAAA+AGG - chr7_1:78871378-78871397 Msa1041280:intron 35.0%
TTCAAGCTTAATTGAGGTTC+TGG + chr7_1:78871435-78871454 None:intergenic 35.0%
TCATATGGTAGCAAAGAAAC+AGG - chr7_1:78871514-78871533 Msa1041280:CDS 35.0%
TCACATTGAAAAGAATCGTG+TGG - chr7_1:78871538-78871557 Msa1041280:CDS 35.0%
! CTTGAATGTCTCTTTGTTGT+TGG + chr7_1:78871613-78871632 None:intergenic 35.0%
!!! AGCGAAAATTTTAACTCGCA+CGG + chr7_1:78871683-78871702 None:intergenic 35.0%
AGGGTAAATAAGACTATGAC+TGG - chr7_1:78872016-78872035 Msa1041280:CDS 35.0%
TAAATAAGACTATGACTGGC+TGG - chr7_1:78872020-78872039 Msa1041280:CDS 35.0%
CAAAGATATGAATGGAAGCT+GGG + chr7_1:78872056-78872075 None:intergenic 35.0%
ACAAAGATATGAATGGAAGC+TGG + chr7_1:78872057-78872076 None:intergenic 35.0%
ACCCACCTTGATACAATTAT+TGG + chr7_1:78872096-78872115 None:intergenic 35.0%
TTAGTATTCCGTCAAGGAAT+GGG - chr7_1:78872227-78872246 Msa1041280:intron 35.0%
!! TGTCAGATTCATTTTTCTCC+AGG - chr7_1:78872322-78872341 Msa1041280:intron 35.0%
ATATTTGCATATGGCCAAAC+AGG - chr7_1:78872449-78872468 Msa1041280:CDS 35.0%
! AAGTTTTTCCTGATCCTGTT+TGG + chr7_1:78872466-78872485 None:intergenic 35.0%
! CTTTTCTCTGTGATCTCTTT+TGG + chr7_1:78872591-78872610 None:intergenic 35.0%
TAAGGTTATACAAGACCTGA+AGG + chr7_1:78872815-78872834 None:intergenic 35.0%
ACATCATGAATCGTGATGAA+AGG + chr7_1:78872894-78872913 None:intergenic 35.0%
ATTCGTAGTAGCTCTCAAAA+AGG - chr7_1:78872940-78872959 Msa1041280:intron 35.0%
TTCGTAGTAGCTCTCAAAAA+GGG - chr7_1:78872941-78872960 Msa1041280:intron 35.0%
CATTAGGTCGATAACATCAA+AGG + chr7_1:78873007-78873026 None:intergenic 35.0%
CTTTGATGTTATCGACCTAA+TGG - chr7_1:78873005-78873024 Msa1041280:intron 35.0%
CCAAAATAGGAGAGAATAAC+AGG + chr7_1:78873116-78873135 None:intergenic 35.0%
! CCTGTTATTCTCTCCTATTT+TGG - chr7_1:78873113-78873132 Msa1041280:CDS 35.0%
!!! ATTCTCTCCTATTTTGGTGA+TGG - chr7_1:78873119-78873138 Msa1041280:CDS 35.0%
! CATGTGAGTTTTTATGAGCA+AGG + chr7_1:78873381-78873400 None:intergenic 35.0%
! AAGAAGTTGGTTGTTCTCTT+TGG - chr7_1:78873458-78873477 Msa1041280:CDS 35.0%
!! AATGTTGGTGGGTTTATTTC+AGG - chr7_1:78873515-78873534 Msa1041280:intron 35.0%
TGTTAAAGAGCTCAAAGAAC+AGG - chr7_1:78873723-78873742 Msa1041280:CDS 35.0%
! GAATCGGAACATTCTTTTTC+CGG - chr7_1:78873873-78873892 Msa1041280:intron 35.0%
!! CCTATATTTTTCAGAGCTTC+CGG + chr7_1:78873895-78873914 None:intergenic 35.0%
TAGTGTAGAGAACAAACACA+TGG - chr7_1:78874092-78874111 Msa1041280:CDS 35.0%
!!! TGGTTTTACTTTGAAGCTGT+AGG + chr7_1:78874371-78874390 None:intergenic 35.0%
TTGTTCAAGACTATTTACCG+GGG + chr7_1:78874457-78874476 None:intergenic 35.0%
! ATAGTCTTGAACAAAACGAC+GGG - chr7_1:78874463-78874482 Msa1041280:CDS 35.0%
!! AGAATGGGTTGATAAGGTAA+TGG - chr7_1:78874512-78874531 Msa1041280:CDS 35.0%
AAACAAAACTGAGAACCTCT+TGG - chr7_1:78874551-78874570 Msa1041280:intron 35.0%
AACAAAACTGAGAACCTCTT+GGG - chr7_1:78874552-78874571 Msa1041280:intron 35.0%
TCCTATAATATGTTCATGGG+AGG - chr7_1:78874660-78874679 Msa1041280:CDS 35.0%
ACCTCCCATGAACATATTAT+AGG + chr7_1:78874664-78874683 None:intergenic 35.0%
CAACAAAAAGCCAAGAATTG+AGG - chr7_1:78874850-78874869 Msa1041280:five_prime_UTR 35.0%
CATGATATAAGCAAAGCAAC+GGG + chr7_1:78875263-78875282 None:intergenic 35.0%
GAAGAGAAAGAGTAGCTAAG+TGG - chr7_1:78869016-78869035 Msa1041280:three_prime_UTR 40.0%
!! GGTTTTATACTGTCACCGTT+GGG + chr7_1:78869107-78869126 None:intergenic 40.0%
!!! TGGTTTTATACTGTCACCGT+TGG + chr7_1:78869108-78869127 None:intergenic 40.0%
! CTTCTTTGTTTCCTTCACCT+CGG - chr7_1:78869369-78869388 Msa1041280:intron 40.0%
! CTTCTAGTTAATGGCATCAG+AGG - chr7_1:78869471-78869490 Msa1041280:CDS 40.0%
CAACATGTGCTTCAACAACA+TGG - chr7_1:78869526-78869545 Msa1041280:CDS 40.0%
AGCCATCTGAGGAAGAATTT+AGG - chr7_1:78869758-78869777 Msa1041280:CDS 40.0%
AGCCTAAATTCTTCCTCAGA+TGG + chr7_1:78869763-78869782 None:intergenic 40.0%
TCTGAGGAAGAATTTAGGCT+TGG - chr7_1:78869763-78869782 Msa1041280:CDS 40.0%
! TTTAGGCTTGGTTTGAGAAG+TGG - chr7_1:78869775-78869794 Msa1041280:CDS 40.0%
! TTAGGCTTGGTTTGAGAAGT+GGG - chr7_1:78869776-78869795 Msa1041280:CDS 40.0%
ATCTATCAGGGAACAAACTC+GGG + chr7_1:78869939-78869958 None:intergenic 40.0%
GTCTAAACTCTAGGTTCCTA+AGG + chr7_1:78870027-78870046 None:intergenic 40.0%
AATTGGACTTCCTACCTTTG+AGG - chr7_1:78870179-78870198 Msa1041280:intron 40.0%
!!! TATGCTGCTGATTTTTAGGG+AGG - chr7_1:78870366-78870385 Msa1041280:CDS 40.0%
!!! ATGCTGCTGATTTTTAGGGA+GGG - chr7_1:78870367-78870386 Msa1041280:CDS 40.0%
CCCTTAAATCCTATGGTGAA+TGG - chr7_1:78870421-78870440 Msa1041280:intron 40.0%
TGGAAACAAAATGGGGCAAA+TGG - chr7_1:78870441-78870460 Msa1041280:intron 40.0%
GCAAATGGTGTGTGGAAATT+TGG - chr7_1:78870456-78870475 Msa1041280:intron 40.0%
AATGGTGTGTGGAAATTTGG+TGG - chr7_1:78870459-78870478 Msa1041280:intron 40.0%
! CAACAAGGTGAATTGATAGC+TGG + chr7_1:78870653-78870672 None:intergenic 40.0%
TCCAATGGTAAGCTGATGTA+TGG - chr7_1:78870784-78870803 Msa1041280:intron 40.0%
ACCATACATCAGCTTACCAT+TGG + chr7_1:78870788-78870807 None:intergenic 40.0%
AAAGAGACTTAGGCCTAGAT+TGG + chr7_1:78871025-78871044 None:intergenic 40.0%
! ATTAGTTTAAGGGGATCGTC+CGG - chr7_1:78871196-78871215 Msa1041280:CDS 40.0%
GGTGGAGAACAAGATTCATA+TGG - chr7_1:78871499-78871518 Msa1041280:CDS 40.0%
!! CAAAGAGCATTTGTTGCTTC+AGG + chr7_1:78871589-78871608 None:intergenic 40.0%
!!! GCGAAAATTTTAACTCGCAC+GGG + chr7_1:78871682-78871701 None:intergenic 40.0%
! CGAGTTTTCCAATCTTGGTA+AGG - chr7_1:78871783-78871802 Msa1041280:CDS 40.0%
TAGGGGAACAAAAGCAAGAA+AGG + chr7_1:78871830-78871849 None:intergenic 40.0%
! TTTTGTTCCCCTACTTCTCT+TGG - chr7_1:78871837-78871856 Msa1041280:CDS 40.0%
AGAAGACACCAAGAGAAGTA+GGG + chr7_1:78871848-78871867 None:intergenic 40.0%
!! GGTGGGTGATTTTGTTTGTT+AGG - chr7_1:78872109-78872128 Msa1041280:intron 40.0%
TTTGGTTGTCCAGGAAAGAA+GGG + chr7_1:78872163-78872182 None:intergenic 40.0%
TCTATTGCGCTCAATTGGTT+TGG + chr7_1:78872181-78872200 None:intergenic 40.0%
TCACAGTTAGTATTCCGTCA+AGG - chr7_1:78872221-78872240 Msa1041280:intron 40.0%
GTTAGTATTCCGTCAAGGAA+TGG - chr7_1:78872226-78872245 Msa1041280:intron 40.0%
GAGCCCTATAATTTACACCT+TGG + chr7_1:78872614-78872633 None:intergenic 40.0%
! TTATCGACCTAATGGACCTT+GGG - chr7_1:78873013-78873032 Msa1041280:intron 40.0%
TGCTTGACTGTTCATGTTCA+AGG - chr7_1:78873196-78873215 Msa1041280:intron 40.0%
CAAGGAAGAGATTTGACATC+TGG - chr7_1:78873214-78873233 Msa1041280:intron 40.0%
! ATGCATTTGGTTGACTTAGC+AGG - chr7_1:78873256-78873275 Msa1041280:intron 40.0%
AAGTGAGAGGGTAGATAAGT+CGG - chr7_1:78873279-78873298 Msa1041280:intron 40.0%
CAATTGCTCCAAGATTCACT+AGG - chr7_1:78873427-78873446 Msa1041280:intron 40.0%
AGTCCAGAAAGTGATGCTAT+TGG - chr7_1:78873572-78873591 Msa1041280:intron 40.0%
TCTCCAATAGCATCACTTTC+TGG + chr7_1:78873578-78873597 None:intergenic 40.0%
AGAGTTGCTACAGTTGAACT+TGG - chr7_1:78873670-78873689 Msa1041280:CDS 40.0%
GTTTCAGATTGCCAGTCTTA+AGG - chr7_1:78873827-78873846 Msa1041280:CDS 40.0%
GGCAAGAAAAGAAGGTGAAT+CGG - chr7_1:78873857-78873876 Msa1041280:intron 40.0%
!! CCGGAAGCTCTGAAAAATAT+AGG - chr7_1:78873892-78873911 Msa1041280:intron 40.0%
TGGTTTATGTGAAAAGGGGA+TGG + chr7_1:78873933-78873952 None:intergenic 40.0%
!! TCGCTGGTTTATGTGAAAAG+GGG + chr7_1:78873937-78873956 None:intergenic 40.0%
!! CTCGCTGGTTTATGTGAAAA+GGG + chr7_1:78873938-78873957 None:intergenic 40.0%
!! ACTCGCTGGTTTATGTGAAA+AGG + chr7_1:78873939-78873958 None:intergenic 40.0%
ATGTTGCCAACTTCAACCAT+TGG + chr7_1:78873996-78874015 None:intergenic 40.0%
TCTGCGAAAGTTCTATTGCA+AGG - chr7_1:78874247-78874266 Msa1041280:intron 40.0%
CTATTCCGTGTTGAACTCAT+TGG - chr7_1:78874330-78874349 Msa1041280:intron 40.0%
TATCAACAAATTCACCGCCA+TGG - chr7_1:78874430-78874449 Msa1041280:CDS 40.0%
TGTTCAAGACTATTTACCGG+GGG + chr7_1:78874456-78874475 None:intergenic 40.0%
GGATGACAAAGAAACAGGTT+CGG - chr7_1:78874488-78874507 Msa1041280:CDS 40.0%
GATGACAAAGAAACAGGTTC+GGG - chr7_1:78874489-78874508 Msa1041280:CDS 40.0%
ACAAAACTGAGAACCTCTTG+GGG - chr7_1:78874553-78874572 Msa1041280:intron 40.0%
TTAAATTGCCACAGCAAGTC+AGG + chr7_1:78874765-78874784 None:intergenic 40.0%
AAGCTTACCAGTTTGACCAA+TGG - chr7_1:78874792-78874811 Msa1041280:five_prime_UTR 40.0%
ACCAGTTTGACCAATGGAAT+TGG - chr7_1:78874798-78874817 Msa1041280:five_prime_UTR 40.0%
TCCAATTCCATTGGTCAAAC+TGG + chr7_1:78874802-78874821 None:intergenic 40.0%
GACCAATGGAATTGGAACAA+AGG - chr7_1:78874806-78874825 Msa1041280:five_prime_UTR 40.0%
AGCCTTTGTTCCAATTCCAT+TGG + chr7_1:78874811-78874830 None:intergenic 40.0%
GATTGTTTCAACGAAGGTGA+AGG + chr7_1:78875007-78875026 None:intergenic 40.0%
AAAGTTGTCTCACATAGGAC+AGG - chr7_1:78875028-78875047 Msa1041280:five_prime_UTR 40.0%
TCCACACCTCTCTGTATTCA+TGG + chr7_1:78869058-78869077 None:intergenic 45.0%
GACCGAAAAAGGAAACCCAA+CGG - chr7_1:78869089-78869108 Msa1041280:intron 45.0%
! CACCGTTGGGTTTCCTTTTT+CGG + chr7_1:78869094-78869113 None:intergenic 45.0%
!! GAAGAAAGTATCCGAGGTGA+AGG + chr7_1:78869383-78869402 None:intergenic 45.0%
!! GAGAGAGAAGAAAGTATCCG+AGG + chr7_1:78869389-78869408 None:intergenic 45.0%
ATGCTGCAGAGTCTCATACA+TGG + chr7_1:78869436-78869455 None:intergenic 45.0%
TCTAGGAAAGCTGAACAAGC+TGG - chr7_1:78869577-78869596 Msa1041280:CDS 45.0%
TCTAGAAGATATGAAGCGGC+AGG - chr7_1:78869685-78869704 Msa1041280:CDS 45.0%
CTAGAAGATATGAAGCGGCA+GGG - chr7_1:78869686-78869705 Msa1041280:CDS 45.0%
GGGTGGTTGAGAAAAATGGT+TGG - chr7_1:78869706-78869725 Msa1041280:CDS 45.0%
! TGGCTCTGCTGGTAAATCTT+TGG + chr7_1:78869743-78869762 None:intergenic 45.0%
! TCAATCTGGAGCTGTTCCTA+AGG - chr7_1:78869828-78869847 Msa1041280:CDS 45.0%
GATCTAGCTGGAATGACCTT+AGG + chr7_1:78869847-78869866 None:intergenic 45.0%
!! CTGATAATGGTGCTCCATCA+GGG + chr7_1:78870110-78870129 None:intergenic 45.0%
CTGGTGGCTGTACAAGAAAT+TGG - chr7_1:78870162-78870181 Msa1041280:intron 45.0%
AGATCAGATGCCTCAAAGGT+AGG + chr7_1:78870192-78870211 None:intergenic 45.0%
!! TACCTTTGAGGCATCTGATC+TGG - chr7_1:78870191-78870210 Msa1041280:intron 45.0%
TTCCAGATCAGATGCCTCAA+AGG + chr7_1:78870196-78870215 None:intergenic 45.0%
TTTAGGGAGGGAAATCATCC+AGG - chr7_1:78870379-78870398 Msa1041280:CDS 45.0%
CAAGACGCAATTCACAATCC+TGG + chr7_1:78870400-78870419 None:intergenic 45.0%
CAGGATTGTGAATTGCGTCT+TGG - chr7_1:78870398-78870417 Msa1041280:intron 45.0%
GTCTTGGCCCTTAAATCCTA+TGG - chr7_1:78870414-78870433 Msa1041280:intron 45.0%
AAAATGGGGCAAATGGTGTG+TGG - chr7_1:78870448-78870467 Msa1041280:intron 45.0%
GATTGATGAGGTCCTTGACA+AGG + chr7_1:78870550-78870569 None:intergenic 45.0%
CTTCTTCTGCATGGAACAGT+TGG - chr7_1:78871078-78871097 Msa1041280:intron 45.0%
AGAGTCATACCTGTTCACCT+TGG + chr7_1:78871156-78871175 None:intergenic 45.0%
!! TTGGCTTTGCAATTCCTCAG+CGG + chr7_1:78871564-78871583 None:intergenic 45.0%
! GCATTTGTTGCTTCAGGTGT+TGG + chr7_1:78871583-78871602 None:intergenic 45.0%
! GAACTGCATTCCAGCTTTTG+CGG + chr7_1:78871743-78871762 None:intergenic 45.0%
! CGTGACGAGTTTTCCAATCT+TGG - chr7_1:78871778-78871797 Msa1041280:CDS 45.0%
GAAGACACCAAGAGAAGTAG+GGG + chr7_1:78871847-78871866 None:intergenic 45.0%
CAGAAGACACCAAGAGAAGT+AGG + chr7_1:78871849-78871868 None:intergenic 45.0%
!! CTTCTCTTGGTGTCTTCTGA+CGG - chr7_1:78871850-78871869 Msa1041280:intron 45.0%
! TATGACTGGCTGGTAGCTTT+AGG - chr7_1:78872030-78872049 Msa1041280:CDS 45.0%
GTTTGGTTGTCCAGGAAAGA+AGG + chr7_1:78872164-78872183 None:intergenic 45.0%
!! CTCAATTGGTTTGGTTGTCC+AGG + chr7_1:78872172-78872191 None:intergenic 45.0%
TATTCCGTCAAGGAATGGGA+AGG - chr7_1:78872231-78872250 Msa1041280:CDS 45.0%
ATTCCGTCAAGGAATGGGAA+GGG - chr7_1:78872232-78872251 Msa1041280:CDS 45.0%
TTAATCTCGTATTGCAGCGG+AGG - chr7_1:78872370-78872389 Msa1041280:intron 45.0%
GAGATCACAGAGAAAAGCCA+AGG - chr7_1:78872594-78872613 Msa1041280:intron 45.0%
TGAGCAAGTCAGGGATCTAT+TGG - chr7_1:78872716-78872735 Msa1041280:CDS 45.0%
AGGGATCTATTGGTCACTGA+TGG - chr7_1:78872726-78872745 Msa1041280:CDS 45.0%
!! AGGTTGATGACACAGAGACA+AGG + chr7_1:78872987-78873006 None:intergenic 45.0%
! GTTATCGACCTAATGGACCT+TGG - chr7_1:78873012-78873031 Msa1041280:intron 45.0%
ACCTATGAGATCGACTACTG+CGG + chr7_1:78873077-78873096 None:intergenic 45.0%
TTGACTTAGCAGGAAGTGAG+AGG - chr7_1:78873266-78873285 Msa1041280:intron 45.0%
TGACTTAGCAGGAAGTGAGA+GGG - chr7_1:78873267-78873286 Msa1041280:intron 45.0%
TGCCTCTTTCAGTCTATCTC+CGG + chr7_1:78873311-78873330 None:intergenic 45.0%
! TGGTTGTTCTCTTTGGTTCC+TGG - chr7_1:78873465-78873484 Msa1041280:CDS 45.0%
!! GTTGGTGGGTTTATTTCAGG+AGG - chr7_1:78873518-78873537 Msa1041280:intron 45.0%
TGGGTTTATTTCAGGAGGAC+AGG - chr7_1:78873523-78873542 Msa1041280:intron 45.0%
GCTGCTCGAGTAAACAAAGA+TGG - chr7_1:78873694-78873713 Msa1041280:CDS 45.0%
! AAGACTGGCAATCTGAAACG+TGG + chr7_1:78873826-78873845 None:intergenic 45.0%
!! GCAGCATTGGCAAGAAAAGA+AGG - chr7_1:78873849-78873868 Msa1041280:intron 45.0%
GGTTGAAGTTGGCAACATTG+AGG - chr7_1:78873998-78874017 Msa1041280:intron 45.0%
AAGAAACAGGTTCGGGAGAA+TGG - chr7_1:78874496-78874515 Msa1041280:CDS 45.0%
AGAAACAGGTTCGGGAGAAT+GGG - chr7_1:78874497-78874516 Msa1041280:CDS 45.0%
!! TTCGGGAGAATGGGTTGATA+AGG - chr7_1:78874506-78874525 Msa1041280:CDS 45.0%
!! GGTGTTGGCAAGAAAGCAAT+GGG - chr7_1:78874574-78874593 Msa1041280:intron 45.0%
! GGACTGTTCCGAGTACATTT+TGG + chr7_1:78874643-78874662 None:intergenic 45.0%
GGCTATGAGATCTGTCTCAA+AGG - chr7_1:78874827-78874846 Msa1041280:five_prime_UTR 45.0%
TTGTCTCACATAGGACAGGA+AGG - chr7_1:78875032-78875051 Msa1041280:five_prime_UTR 45.0%
!! GAGCTATGTCACTTTGCTCT+TGG - chr7_1:78875122-78875141 Msa1041280:five_prime_UTR 45.0%
!!! ATAATTATTATTTTTGTTTT+AGG - chr7_1:78870053-78870072 Msa1041280:intron 5.0%
GCCATGAATACAGAGAGGTG+TGG - chr7_1:78869054-78869073 Msa1041280:intron 50.0%
! ATACAGAGAGGTGTGGAGCT+AGG - chr7_1:78869061-78869080 Msa1041280:intron 50.0%
CTGCAGAGTCTCATACATGG+AGG + chr7_1:78869433-78869452 None:intergenic 50.0%
GGCAGGGTGGTTGAGAAAAA+TGG - chr7_1:78869702-78869721 Msa1041280:CDS 50.0%
TTTACCAGCAGAGCCATCTG+AGG - chr7_1:78869747-78869766 Msa1041280:CDS 50.0%
GGGATCAGTGCAGAATCAAC+AGG + chr7_1:78870090-78870109 None:intergenic 50.0%
! GATTCTGCACTGATCCCTGA+TGG - chr7_1:78870093-78870112 Msa1041280:intron 50.0%
!! GCTGATAATGGTGCTCCATC+AGG + chr7_1:78870111-78870130 None:intergenic 50.0%
GAACATCGTATCGCAAGCCA+AGG - chr7_1:78871136-78871155 Msa1041280:intron 50.0%
TATCGCAAGCCAAGGTGAAC+AGG - chr7_1:78871144-78871163 Msa1041280:intron 50.0%
ACTCTTCACACCGCAAAAGC+TGG - chr7_1:78871730-78871749 Msa1041280:intron 50.0%
!! TCTTGGTGTCTTCTGACGGA+TGG - chr7_1:78871854-78871873 Msa1041280:intron 50.0%
CGAGTAAGACCCTTCTTTCC+TGG - chr7_1:78872151-78872170 Msa1041280:intron 50.0%
TGTCCCTTCCCATTCCTTGA+CGG + chr7_1:78872238-78872257 None:intergenic 50.0%
TTTGGACCATCTGCTACCCA+AGG - chr7_1:78872283-78872302 Msa1041280:CDS 50.0%
AACCAACCTTGGGTAGCAGA+TGG + chr7_1:78872292-78872311 None:intergenic 50.0%
! TCTGCTACCCAAGGTTGGTT+TGG - chr7_1:78872292-78872311 Msa1041280:CDS 50.0%
!! CTGCTACCCAAGGTTGGTTT+GGG - chr7_1:78872293-78872312 Msa1041280:CDS 50.0%
CACAGTCCCAAACCAACCTT+GGG + chr7_1:78872302-78872321 None:intergenic 50.0%
ACACAGTCCCAAACCAACCT+TGG + chr7_1:78872303-78872322 None:intergenic 50.0%
GCATATGGCCAAACAGGATC+AGG - chr7_1:78872455-78872474 Msa1041280:CDS 50.0%
ACAGAGACAAGGCTTGCATC+TGG + chr7_1:78872976-78872995 None:intergenic 50.0%
TCTTGTGCCCAAGGTCCATT+AGG + chr7_1:78873023-78873042 None:intergenic 50.0%
TCGACTACTGCGGTCGTTAA+GGG + chr7_1:78873067-78873086 None:intergenic 50.0%
ATCGACTACTGCGGTCGTTA+AGG + chr7_1:78873068-78873087 None:intergenic 50.0%
ACCGCAGTAGTCGATCTCAT+AGG - chr7_1:78873073-78873092 Msa1041280:intron 50.0%
AACCAAATGCATGCATCCGC+GGG + chr7_1:78873248-78873267 None:intergenic 50.0%
CAACCAAATGCATGCATCCG+CGG + chr7_1:78873249-78873268 None:intergenic 50.0%
TGAGAGGGTAGATAAGTCGG+AGG - chr7_1:78873282-78873301 Msa1041280:intron 50.0%
CTCTTTCAGTCTATCTCCGG+TGG + chr7_1:78873308-78873327 None:intergenic 50.0%
CACCGGAGATAGACTGAAAG+AGG - chr7_1:78873306-78873325 Msa1041280:intron 50.0%
TGCCAGTCTTAAGGCAGCAT+TGG - chr7_1:78873836-78873855 Msa1041280:CDS 50.0%
TGCCAATGCTGCCTTAAGAC+TGG + chr7_1:78873841-78873860 None:intergenic 50.0%
CAACTTCAACCATTGGTCGC+CGG + chr7_1:78873989-78874008 None:intergenic 50.0%
TCTTGAACAAAACGACGGGC+AGG - chr7_1:78874467-78874486 Msa1041280:CDS 50.0%
GGGCAGGATGACAAAGAAAC+AGG - chr7_1:78874483-78874502 Msa1041280:CDS 50.0%
TTTCTTGCCAACACCCCAAG+AGG + chr7_1:78874569-78874588 None:intergenic 50.0%
!! GGGTGTTGGCAAGAAAGCAA+TGG - chr7_1:78874573-78874592 Msa1041280:intron 50.0%
!! GTCAGGTTCTGAGGAATCAC+TGG + chr7_1:78874748-78874767 None:intergenic 50.0%
CGTTTCATGTCAACAGGAGC+TGG + chr7_1:78875061-78875080 None:intergenic 50.0%
CACGCGCCATGAATACAGAG+AGG - chr7_1:78869049-78869068 Msa1041280:three_prime_UTR 55.0%
! GAGAGGTGTGGAGCTAGGTT+CGG - chr7_1:78869066-78869085 Msa1041280:intron 55.0%
! AGAGGTGTGGAGCTAGGTTC+GGG - chr7_1:78869067-78869086 Msa1041280:intron 55.0%
GCTAGGTTCGGGACCGAAAA+AGG - chr7_1:78869078-78869097 Msa1041280:intron 55.0%
GAAGATATGAAGCGGCAGGG+TGG - chr7_1:78869689-78869708 Msa1041280:CDS 55.0%
! TCTTCCTCAGATGGCTCTGC+TGG + chr7_1:78869754-78869773 None:intergenic 55.0%
AAAGAATCGTGTGGCCGCTG+AGG - chr7_1:78871547-78871566 Msa1041280:CDS 55.0%
GTTGCAGGAACGCACATTCG+TGG - chr7_1:78871916-78871935 Msa1041280:intron 55.0%
GACCATCTGCTACCCAAGGT+TGG - chr7_1:78872287-78872306 Msa1041280:CDS 55.0%
CTACACGGTTCTTGTGCCCA+AGG + chr7_1:78873032-78873051 None:intergenic 55.0%
GGGCACAAGAACCGTGTAGT+TGG - chr7_1:78873033-78873052 Msa1041280:intron 55.0%
ACTACTGCGGTCGTTAAGGG+CGG + chr7_1:78873064-78873083 None:intergenic 55.0%
GTAGATAAGTCGGAGGCCAC+CGG - chr7_1:78873289-78873308 Msa1041280:intron 55.0%
AACCAGCGAGTTGCAGACAC+TGG - chr7_1:78873948-78873967 Msa1041280:intron 55.0%
GCAGACACTGGTGATCAGCT+TGG - chr7_1:78873960-78873979 Msa1041280:intron 55.0%
CTGGTGATCAGCTTGGATGC+CGG - chr7_1:78873967-78873986 Msa1041280:intron 55.0%
CGGCGACCAATGGTTGAAGT+TGG - chr7_1:78873987-78874006 Msa1041280:intron 55.0%
AGACTATTTACCGGGGGCCA+TGG + chr7_1:78874450-78874469 None:intergenic 55.0%
CTGAGAACCTCTTGGGGTGT+TGG - chr7_1:78874559-78874578 Msa1041280:intron 55.0%
CCACAGCAAGTCAGGTTCTG+AGG + chr7_1:78874757-78874776 None:intergenic 55.0%
!! CCTCAGAACCTGACTTGCTG+TGG - chr7_1:78874754-78874773 Msa1041280:exon 55.0%
GGCTTAGCTCACGCTGCTTC+TGG - chr7_1:78871937-78871956 Msa1041280:intron 60.0%
GGGCGGTTGCTCCAACTACA+CGG + chr7_1:78873047-78873066 None:intergenic 60.0%
! ACATCTGGAGCTACCACCCG+CGG - chr7_1:78873229-78873248 Msa1041280:intron 60.0%
CAAATGCATGCATCCGCGGG+TGG + chr7_1:78873245-78873264 None:intergenic 60.0%
CACCCGCGGATGCATGCATT+TGG - chr7_1:78873243-78873262 Msa1041280:intron 60.0%
CACCAGTGTCTGCAACTCGC+TGG + chr7_1:78873953-78873972 None:intergenic 60.0%
AAATTCACCGCCATGGCCCC+CGG - chr7_1:78874437-78874456 Msa1041280:CDS 60.0%
CTATTTACCGGGGGCCATGG+CGG + chr7_1:78874447-78874466 None:intergenic 60.0%
GCTTGGATGCCGGCGACCAA+TGG - chr7_1:78873977-78873996 Msa1041280:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 78868878 78875368 78868878 ID=Msa1041280;Name=Msa1041280
chr7_1 mRNA 78868878 78875368 78868878 ID=Msa1041280-mRNA-1;Parent=Msa1041280;Name=Msa1041280-mRNA-1;_AED=0.13;_eAED=0.13;_QI=603|0.9|0.80|1|0.95|0.90|21|220|1001
chr7_1 exon 78868878 78869072 78868878 ID=Msa1041280-mRNA-1:exon:21121;Parent=Msa1041280-mRNA-1
chr7_1 exon 78869122 78869270 78869122 ID=Msa1041280-mRNA-1:exon:21120;Parent=Msa1041280-mRNA-1
chr7_1 exon 78869375 78869871 78869375 ID=Msa1041280-mRNA-1:exon:21119;Parent=Msa1041280-mRNA-1
chr7_1 exon 78870227 78870412 78870227 ID=Msa1041280-mRNA-1:exon:21118;Parent=Msa1041280-mRNA-1
chr7_1 exon 78870502 78870578 78870502 ID=Msa1041280-mRNA-1:exon:21117;Parent=Msa1041280-mRNA-1
chr7_1 exon 78870665 78870709 78870665 ID=Msa1041280-mRNA-1:exon:21116;Parent=Msa1041280-mRNA-1
chr7_1 exon 78870798 78871051 78870798 ID=Msa1041280-mRNA-1:exon:21115;Parent=Msa1041280-mRNA-1
chr7_1 exon 78871152 78871308 78871152 ID=Msa1041280-mRNA-1:exon:21114;Parent=Msa1041280-mRNA-1
chr7_1 exon 78871472 78871664 78871472 ID=Msa1041280-mRNA-1:exon:21113;Parent=Msa1041280-mRNA-1
chr7_1 exon 78871753 78871859 78871753 ID=Msa1041280-mRNA-1:exon:21112;Parent=Msa1041280-mRNA-1
chr7_1 exon 78871942 78872115 78871942 ID=Msa1041280-mRNA-1:exon:21111;Parent=Msa1041280-mRNA-1
chr7_1 exon 78872228 78872323 78872228 ID=Msa1041280-mRNA-1:exon:21110;Parent=Msa1041280-mRNA-1
chr7_1 exon 78872447 78872528 78872447 ID=Msa1041280-mRNA-1:exon:21109;Parent=Msa1041280-mRNA-1
chr7_1 exon 78872615 78872746 78872615 ID=Msa1041280-mRNA-1:exon:21108;Parent=Msa1041280-mRNA-1
chr7_1 exon 78872847 78872921 78872847 ID=Msa1041280-mRNA-1:exon:21107;Parent=Msa1041280-mRNA-1
chr7_1 exon 78873081 78873149 78873081 ID=Msa1041280-mRNA-1:exon:21106;Parent=Msa1041280-mRNA-1
chr7_1 exon 78873456 78873527 78873456 ID=Msa1041280-mRNA-1:exon:21105;Parent=Msa1041280-mRNA-1
chr7_1 exon 78873626 78873862 78873626 ID=Msa1041280-mRNA-1:exon:21104;Parent=Msa1041280-mRNA-1
chr7_1 exon 78874028 78874171 78874028 ID=Msa1041280-mRNA-1:exon:21103;Parent=Msa1041280-mRNA-1
chr7_1 exon 78874397 78874563 78874397 ID=Msa1041280-mRNA-1:exon:21102;Parent=Msa1041280-mRNA-1
chr7_1 exon 78874648 78875368 78874648 ID=Msa1041280-mRNA-1:exon:21101;Parent=Msa1041280-mRNA-1
chr7_1 five_prime_UTR 78874766 78875368 78874766 ID=Msa1041280-mRNA-1:five_prime_utr;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78874648 78874765 78874648 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78874397 78874563 78874397 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78874028 78874171 78874028 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78873626 78873862 78873626 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78873456 78873527 78873456 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78873081 78873149 78873081 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78872847 78872921 78872847 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78872615 78872746 78872615 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78872447 78872528 78872447 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78872228 78872323 78872228 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78871942 78872115 78871942 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78871753 78871859 78871753 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78871472 78871664 78871472 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78871152 78871308 78871152 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78870798 78871051 78870798 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78870665 78870709 78870665 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78870502 78870578 78870502 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78870227 78870412 78870227 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78869375 78869871 78869375 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 CDS 78869147 78869270 78869147 ID=Msa1041280-mRNA-1:cds;Parent=Msa1041280-mRNA-1
chr7_1 three_prime_UTR 78869122 78869146 78869122 ID=Msa1041280-mRNA-1:three_prime_utr;Parent=Msa1041280-mRNA-1
chr7_1 three_prime_UTR 78868878 78869072 78868878 ID=Msa1041280-mRNA-1:three_prime_utr;Parent=Msa1041280-mRNA-1
Gene Sequence

>Msa1041280

ATGGCATCAGAGGCATCCTTTTCCTTTTCAGTTGCATCTGTTGTTCAACATGTGCTTCAACAACATGGTCATCGTCTCCAAGATCTTGATTTAGAATCTAGGAAAGCTGAACAAGCTGCATCTAGAAGATATGAAGCGGCAGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCCAAAGATTTACCAGCAGAGCCATCTGAGGAAGAATTTAGGCTTGGTTTGAGAAGTGGGATTATTCTTTGTAATGTTATTAATAAGTTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTGATCCCTGATGGAGCACCATTATCAGCATATCAGTATTTTGAAAATGTGAGGAATTTTCTGGTGGCTGTACAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGGAAATCATCCAGGATTGTGAATTGCGTCTTGGCCCTTAAATCCTATGGTGAATGGAAACAAAATGGGGCAAATGGTGTGTGGAAATTTGGTGGAAATCTCAAACCTACTATTTCTGCAAAATCTCTTGTGAGAAAAAACTCGGAACCATTTACTAATTCCTTGTCAAGGACCTCATCAATCAATGAAAAAACTCTGGCTACTCTTAATTCTGATGTTGAGTCTAATAAAATGTCTGGTTCCCATTCTTTGAGTATGCTTATTCGTTCTATTCTGTCAGATAAGAAGCAAGATGAAATTCCAATGTTGGTTGAATCTGTTTTGAATAAGGTTGTAGAAGAGTTTGAACATCGTATCGCAAGCCAAGGTGAACAGACAAAAGTTACTTTAAGAGATCATGTTTCTGAAAGAAATGGATCTGCATCAAAGTTTATGGTGGCAGATAAAAAGGTGGAGAACAAGATTCATATGGTAGCAAAGAAACAGGATCACATTGAAAAGAATCGTGTGGCCGCTGAGGAATTGCAAAGCCAACACCTGAAGCAACAAATGCTCTTTGACCAACAACAAAGAGACATTCAAGAGCTAAAGCTTACTCTTCACACCGCAAAAGCTGGAATGCAGTTCATGCAAATGAAATTTCGTGACGAGTTTTCCAATCTTGGAACGCACATTCGTGGCTTAGCTCACGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGTAAACTATACAATGAAGTTCAAGATCTTAAGGGAAGTATTAGGGTATACTGTCGAGTAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAATAGAAAATATAGAAGATGGAACTATCACAGTTAGTATTCCGTCAAGGAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCTACCCAAGCGGAGGTCTTCCTTGATATGCAACCACTTATTAGATCTGTTCTTGATGGCTATAATGTGTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACAATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTATAGGGCTCTAAGTGATTTGTTTATGATAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTATGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGGGATCTATTGGTCACTGATGGAACAAACAGAAGATATCCTTTCATCAAAATTCGTAGTAGCTCTCAAAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTCTCTGTGTCATCAACCTTTGATGTTATCGACCTAATGGACCTTGGGCACAAGAACCGTGTAGTTGGAGCAACCGCCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTACCACCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTAGATAAGTCGGAGGCCACCGGAGATAGACTGAAAGAGGCACAACATATTAACAAATCTCTATCAGCTTTGGGTGATGTCATTGCGTCCCTTGCTCATAAAAACTCACATGTACCTTATAGAAATAGTAAGCTCACACAATTGCTCCAAGATTCACTAGGAGGACAGGCTAAGACACTGATGTTTGTTCACATAAGTCCAGAAAAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATGGTGCAAATGTTAAAGAGCTCAAAGAACAGATTGCCAGTCTTAAGGCAGCATTGGCAAGAAAAGAAGGTGAATCGGAACATTCTTTTTCCGGAAGCTCTGAAAAATATAGGACAAAGGCTAGTGAGCCATCCCCTTTTCACATAAACCAGCGAGTTGCAGACACTGGTGATCAGCTTGGATGCCGGCGACCAATGGTTGAAGTTGGCAACATTGAGCTTCAAAGTAAAACCATAATAAGGCAGAAAACTCAAAGCTTTGATTTTGATGAGATATCAACAAATTCACCGCCATGGCCCCCGGTAAATAGTCTTGAACAAAACGACGGGCAGGATGACAAAGAAACAGGTTCGGGAGAATGGGTTGATAAGGTAATGGTAAACAAGCTAGAAGCAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAGAAAGCAATGGGAACTTATCCGAGTCATTTCATCAAACATATCTCCAAGATTCTTCCAAAATGTACTCGGAACAGTCCTATAATATGTTCATGGGAGGTAACCAGTTTAATAGCATTAATATGGGTTCAGATGATAATATGGATGAGGTTGATGCTATAACCAGTGATTCCTCAGAACCTGACTTGCTGTGGCAATTTAATCATTCTAAGCTTACCAGTTTGACCAATGGAATTGGAACAAAGGCTATGAGATCTGTCTCAAAGGCAACAAAAAGCCAAGAATTGAGCAAGAGTTTTTTTCATTCTTCTCTTGGTCCTTCACCTTCGTTGAAACAATCAAAAGTTGTCTCACATAGGACAGGAAGGAGTCCAGCTCCTGTTGACATGAAACGTAAAATTGGTAGAAAGTAA
Protein sequence

>Msa1041280

MASEASFSFSVASVVQHVLQQHGHRLQDLDLESRKAEQAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKFQSGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYGEWKQNGANGVWKFGGNLKPTISAKSLVRKNSEPFTNSLSRTSSINEKTLATLNSDVESNKMSGSHSLSMLIRSILSDKKQDEIPMLVESVLNKVVEEFEHRIASQGEQTKVTLRDHVSERNGSASKFMVADKKVENKIHMVAKKQDHIEKNRVAAEELQSQHLKQQMLFDQQQRDIQELKLTLHTAKAGMQFMQMKFRDEFSNLGTHIRGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFFPGQPNQLSAIENIEDGTITVSIPSRNGKGQRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFMIADQRKDTFHYDVYVQMIEIYNEQVRDLLVTDGTNRRYPFIKIRSSSQKGLSVPDASLVSVSSTFDVIDLMDLGHKNRVVGATALNDRSSRSHSCLTVHVQGRDLTSGATTRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAHKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEKRVATVELGAARVNKDGANVKELKEQIASLKAALARKEGESEHSFSGSSEKYRTKASEPSPFHINQRVADTGDQLGCRRPMVEVGNIELQSKTIIRQKTQSFDFDEISTNSPPWPPVNSLEQNDGQDDKETGSGEWVDKVMVNKLEANKTENLLGCWQESNGNLSESFHQTYLQDSSKMYSEQSYNMFMGGNQFNSINMGSDDNMDEVDAITSDSSEPDLLWQFNHSKLTSLTNGIGTKAMRSVSKATKSQELSKSFFHSSLGPSPSLKQSKVVSHRTGRSPAPVDMKRKIGRK*