AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241040 MtrunA17_Chr2g0292391 99.163 836 3 1 1 832 1 836 0.0 1717
Msa0241040 MtrunA17_Chr4g0028991 69.451 838 237 7 4 832 19 846 0.0 1194
Msa0241040 MtrunA17_Chr2g0331131 67.347 833 257 9 9 832 10 836 0.0 1160
Msa0241040 MtrunA17_Chr3g0140351 66.587 832 258 9 9 832 16 835 0.0 1152
Msa0241040 MtrunA17_Chr8g0340411 66.346 832 262 9 9 832 11 832 0.0 1148
Msa0241040 MtrunA17_Chr2g0326731 63.496 841 281 9 4 832 13 839 0.0 1098
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241040 AT2G34710.1 78.427 839 163 10 7 832 19 852 0.0 1351
Msa0241040 AT1G30490.1 76.457 841 169 11 7 832 15 841 0.0 1322
Msa0241040 AT5G60690.1 66.982 845 246 11 4 832 15 842 0.0 1146
Msa0241040 AT1G52150.1 66.108 835 261 13 9 832 13 836 0.0 1126
Msa0241040 AT1G52150.2 66.148 836 260 14 9 832 13 837 0.0 1123
Msa0241040 AT4G32880.1 64.466 833 277 12 9 832 11 833 0.0 1108
Msa0241040 AT1G52150.3 65.947 787 246 13 9 784 13 788 0.0 1048
Msa0241040 AT5G32670.1 80.000 70 14 0 286 355 37 106 1.30e-31 122
Msa0241040 AT4G04890.2 30.534 131 62 3 13 122 65 187 3.02e-11 67.8
Msa0241040 AT4G04890.1 30.534 131 62 3 13 122 65 187 3.02e-11 67.8
Msa0241040 AT4G21750.2 23.301 309 192 9 189 478 306 588 3.61e-11 67.4
Msa0241040 AT4G21750.1 23.301 309 192 9 189 478 306 588 3.61e-11 67.4
Msa0241040 AT4G21750.3 23.301 309 192 9 189 478 306 588 3.61e-11 67.4
Msa0241040 AT4G21750.4 23.301 309 192 9 189 478 306 588 3.61e-11 67.4

Find 242 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGATACTTAACTGATTT+AGG 0.211026 2_2:+16475479 None:intergenic
CGTGCCAGTGCAACATCTTC+TGG 0.212898 2_2:+16475752 None:intergenic
ATAGAAAGTGCCATTGTTAA+AGG 0.232468 2_2:+16479221 None:intergenic
CCACTCTCTTTCATAGAAAA+TGG 0.263136 2_2:+16479353 None:intergenic
AGTGATTCTCAAAGGTAAAT+TGG 0.270937 2_2:+16475247 None:intergenic
TCTCATCTGGTGTATGAAAA+TGG 0.286768 2_2:-16478190 Msa0241040:CDS
GATGCCCTCTTATTGCCTTC+TGG 0.294752 2_2:-16475524 Msa0241040:CDS
CGATCAGAATGGGCTGATTA+TGG 0.299721 2_2:-16476028 Msa0241040:CDS
TCCAAAGCTTCAACTTGTTC+AGG 0.301125 2_2:+16479158 None:intergenic
AAAGTTAAGTATCTTGATTA+TGG 0.305354 2_2:+16474356 None:intergenic
CGATGACGGTTGGTCGTTGC+TGG 0.308758 2_2:-16476331 Msa0241040:CDS
CTTGGGCCAAAGTCTCTTCC+TGG 0.311536 2_2:-16475120 Msa0241040:CDS
CTGCAAAGGATTCATCTATA+GGG 0.317197 2_2:+16475549 None:intergenic
CGTGCCAAAGCATGAGCTTC+TGG 0.318520 2_2:+16475093 None:intergenic
GCTTCTACTGGTGGCCCTAC+AGG 0.321934 2_2:-16476990 Msa0241040:CDS
CCCTTTGAGGACGCTGAGTT+GGG 0.322005 2_2:+16477915 None:intergenic
CGCTATCCCACTAGAGTTGC+GGG 0.322607 2_2:+16477552 None:intergenic
TCATCAATGTTCCCAACATT+TGG 0.323462 2_2:-16476237 Msa0241040:CDS
TAGAGGGGCCTCAGAACTTC+AGG 0.327055 2_2:+16476757 None:intergenic
TGGCTGCAGCACGAGACTTT+TGG 0.327088 2_2:-16477159 Msa0241040:CDS
AATTACCTGTTGCATAATCT+TGG 0.333667 2_2:+16474632 None:intergenic
CTGGGAAAGCCACCGGGTCT+TGG 0.333766 2_2:+16475950 None:intergenic
TCTGCAAAGGATTCATCTAT+AGG 0.335291 2_2:+16475548 None:intergenic
CACCCAGTCGACAGCAGTTC+CGG 0.346069 2_2:+16477721 None:intergenic
GTGATCAACAATATGAATAA+TGG 0.348818 2_2:+16476890 None:intergenic
AACCTAAACAGATCAAAGTT+TGG 0.353061 2_2:-16479052 Msa0241040:CDS
GTTCTTCTTCTTCACTCTGC+AGG 0.354478 2_2:+16479309 None:intergenic
TGAAAATGATGAAGCTAGTT+TGG 0.359530 2_2:+16479287 None:intergenic
CGTGCTGCAGCCAAAGTTGT+AGG 0.366709 2_2:+16477169 None:intergenic
TCCTGAACAAGTTGAAGCTT+TGG 0.370693 2_2:-16479159 Msa0241040:CDS
AACCAAACTTTGATCTGTTT+AGG 0.371881 2_2:+16479050 None:intergenic
TGGTTTGAAAAGGTGAATAT+TGG 0.372040 2_2:+16474759 None:intergenic
GGAATTGATGAAAATTCAAT+TGG 0.372836 2_2:-16475596 Msa0241040:CDS
TAGCTTTCATGTTCATCAAC+TGG 0.374323 2_2:-16474399 Msa0241040:CDS
GAAAACCAGAAGGCAATAAG+AGG 0.376994 2_2:+16475519 None:intergenic
TGCAATGAACAAGCTCTTGA+TGG 0.381020 2_2:-16478242 Msa0241040:CDS
AGGTGTTGGCAGAGAGAGAT+GGG 0.382069 2_2:+16479417 Msa0241050:intron
ACTGAGATATACTACAAGTT+TGG 0.384206 2_2:-16477134 Msa0241040:CDS
GACGTATGCGCCTACAACTT+TGG 0.386052 2_2:-16477179 Msa0241040:CDS
CCTGGCAGAGTTCCTATCTA+AGG 0.394397 2_2:-16477747 Msa0241040:CDS
CAACTGTCTTGGATAGTATC+AGG 0.412660 2_2:+16474276 None:intergenic
TCTCGGCCAGGTACTCAGCT+TGG 0.412971 2_2:-16475138 Msa0241040:CDS
GTCGACTGGGTGCAGATGAT+TGG 0.420555 2_2:-16477710 Msa0241040:CDS
CCACAACACTACGCACATAC+TGG 0.420779 2_2:+16475196 None:intergenic
AGGTAAAATGACCTGGCTGC+TGG 0.424070 2_2:+16475931 None:intergenic
CTCGGCCAGGTACTCAGCTT+GGG 0.425766 2_2:-16475137 Msa0241040:CDS
AAAGAGAGTGGAGGCTCTCT+TGG 0.430669 2_2:-16479341 Msa0241040:five_prime_UTR
CGTCCATCTGGTGAAGGTGC+TGG 0.432133 2_2:-16475312 Msa0241040:CDS
TGTCTTTGTGTAGCCTGGTC+CGG 0.433455 2_2:-16477599 Msa0241040:intron
GGGTTGTTTGCATCCCTTTG+AGG 0.434329 2_2:+16477902 None:intergenic
CTTCCTTTCTTTGCTTCTCA+CGG 0.436865 2_2:+16478299 None:intergenic
TTCGCCAGAAGCTCATGCTT+TGG 0.437914 2_2:-16475097 Msa0241040:CDS
GAAAATTAGTACAACTGTCT+TGG 0.439310 2_2:+16474265 None:intergenic
GTTCTCCAAGATTATGCAAC+AGG 0.439721 2_2:-16474637 Msa0241040:intron
TCTAGTAATGCTCGTCCATC+TGG 0.440636 2_2:-16475324 Msa0241040:CDS
CTGGCTGCTGGGAAAGCCAC+CGG 0.441166 2_2:+16475943 None:intergenic
GTGCCAGTGCAACATCTTCT+GGG 0.442652 2_2:+16475753 None:intergenic
GAGCATTAGAATAGTTCAAA+AGG 0.443481 2_2:+16474226 None:intergenic
ATAGAAAATGGTGAGGTTGA+AGG 0.445451 2_2:+16479365 None:intergenic
TCCCTTTGAGGACGCTGAGT+TGG 0.445674 2_2:+16477914 None:intergenic
CAGGGTTATGCATCTCTGCC+AGG 0.448828 2_2:-16474514 Msa0241040:CDS
GTTTAGGTTCAATGTTAGAA+AGG 0.451232 2_2:+16479066 None:intergenic
GCAGAAGCAAGTTTCTCATC+TGG 0.452876 2_2:-16478203 Msa0241040:CDS
TATTGTACCACCACCACCAT+TGG 0.458672 2_2:+16477322 None:intergenic
TTTGTGTATCAAGTATGAAT+AGG 0.458792 2_2:-16474486 Msa0241040:CDS
TCAGCTCTCACAAAATTTGA+CGG 0.461588 2_2:+16476960 None:intergenic
AAGGTGTTGGCAGAGAGAGA+TGG 0.461612 2_2:+16479416 Msa0241050:intron
CACGTTTACAGACAGTGAAT+AGG 0.461719 2_2:-16478273 Msa0241040:CDS
GCATGAGCTTCTGGCGAACC+AGG 0.462184 2_2:+16475102 None:intergenic
TCCAGTGGAGAAATTCAGTA+TGG 0.463307 2_2:-16476582 Msa0241040:CDS
CTACCGGAACTGCTGTCGAC+TGG 0.464066 2_2:-16477724 Msa0241040:CDS
CTGCAGTAGCATTGATGCCT+TGG 0.464912 2_2:+16476197 None:intergenic
TAGTCTTCTCGCCGTGGCTG+AGG 0.466571 2_2:-16477774 Msa0241040:CDS
TGTTGTCTTCTCAAAGAACT+AGG 0.467328 2_2:+16479110 None:intergenic
TCGACTGGGTGCAGATGATT+GGG 0.468510 2_2:-16477709 Msa0241040:CDS
CAGTTCCGGTAGCCTTAGAT+AGG 0.468587 2_2:+16477735 None:intergenic
AGAACATTGGATTTACTTGA+AGG 0.468751 2_2:-16475348 Msa0241040:CDS
CCATGGCAATTGCGCCCTCT+CGG 0.469500 2_2:-16475155 Msa0241040:CDS
TAGCCTGGTCCGGAATCTAT+TGG 0.469832 2_2:-16477589 Msa0241040:CDS
CTTGGACACGGAACTGCATA+GGG 0.470550 2_2:+16475968 None:intergenic
TAAATTGGAATGCAATTGTA+AGG 0.473795 2_2:+16475262 None:intergenic
ACTTTCTATGCATAAAGAAA+TGG 0.474459 2_2:-16479207 Msa0241040:CDS
CTTCTCAAAGAACTAGGCTT+AGG 0.476477 2_2:+16479116 None:intergenic
ATGCAATATTGAAACAACTT+TGG 0.476907 2_2:-16474913 Msa0241040:CDS
ATTAAGAACTTTCCATGCAA+TGG 0.481074 2_2:+16474444 None:intergenic
CCCAACTCAGCGTCCTCAAA+GGG 0.484390 2_2:-16477915 Msa0241040:CDS
CTCTAGACTCACAAGGCCGC+AGG 0.485153 2_2:+16477522 None:intergenic
GGCGAACCAGGAAGAGACTT+TGG 0.485486 2_2:+16475114 None:intergenic
TCTTGGACACGGAACTGCAT+AGG 0.487296 2_2:+16475967 None:intergenic
TCAACTGGTCCTTTGTCTGA+TGG 0.487503 2_2:-16474384 Msa0241040:exon
GCGCGACAATGTGGCTTCCA+TGG 0.487773 2_2:-16475223 Msa0241040:CDS
CCTTAGATAGGAACTCTGCC+AGG 0.488058 2_2:+16477747 None:intergenic
GCAATTGCGCCCTCTCGGCC+AGG 0.488973 2_2:-16475150 Msa0241040:CDS
CATGAAAGCTAAGCAGTGAT+TGG 0.490947 2_2:+16474411 None:intergenic
CAAGCATGTCTAGTCCAGCC+TGG 0.492233 2_2:+16474739 None:intergenic
GGTGAAGGTGCTGGTTCAAA+CGG 0.495460 2_2:-16475303 Msa0241040:CDS
CTTCTACTGGTGGCCCTACA+GGG 0.495589 2_2:-16476989 Msa0241040:CDS
CAACAAAATAATACCTTAGT+GGG 0.496377 2_2:+16477499 None:intergenic
ACAACAAAATAATACCTTAG+TGG 0.496744 2_2:+16477498 None:intergenic
GGTAAAATGACCTGGCTGCT+GGG 0.497199 2_2:+16475932 None:intergenic
CGCCGTGGCTGAGGAGACCC+TGG 0.498447 2_2:-16477765 Msa0241040:CDS
GAGGGAGCATCGATCAGAAT+GGG 0.498992 2_2:-16476038 Msa0241040:CDS
AGGGATGCAAACAACCCAGC+TGG 0.499948 2_2:-16477896 Msa0241040:CDS
CCTGGAGGTAGTTCGTATAG+AGG 0.500505 2_2:-16475789 Msa0241040:CDS
CTTAACTGATTTAGGATCCA+AGG 0.504335 2_2:+16475487 None:intergenic
AAAGGTGTTACTAACCCAGC+TGG 0.505524 2_2:+16477881 None:intergenic
GCTGTTTCCCGCAACTCTAG+TGG 0.506941 2_2:-16477559 Msa0241040:CDS
CAGTCTATCTTTAAGAATCT+CGG 0.507367 2_2:+16477391 None:intergenic
AGACACCACCTCCAAATGTT+GGG 0.507773 2_2:+16476226 None:intergenic
TGAGGGAGCATCGATCAGAA+TGG 0.509076 2_2:-16476039 Msa0241040:CDS
TGGATGCTGGTAAATATGTA+AGG 0.509737 2_2:-16479187 Msa0241040:CDS
TACCGGAACTGCTGTCGACT+GGG 0.512119 2_2:-16477723 Msa0241040:CDS
TCAATGTTCCCAACATTTGG+AGG 0.512154 2_2:-16476234 Msa0241040:CDS
TGGGAACATTGATGAATAGT+TGG 0.512795 2_2:+16476245 None:intergenic
ATTGTACCACCACCACCATT+GGG 0.513919 2_2:+16477323 None:intergenic
CTAAAAGTTCTCAAAACAGC+TGG 0.514675 2_2:+16476546 None:intergenic
TTTGGCCCAAGCTGAGTACC+TGG 0.517249 2_2:+16475132 None:intergenic
TCCAATGTTCTTGATGTGGT+TGG 0.518577 2_2:+16475360 None:intergenic
TAGTCCAGCCTGGTTTGAAA+AGG 0.518962 2_2:+16474749 None:intergenic
ATTGTTCCCAATGGTGGTGG+TGG 0.519176 2_2:-16477329 Msa0241040:CDS
TGGTGAGGTTGAAGGTGGTA+AGG 0.519188 2_2:+16479373 Msa0241050:intron
CTTGAGACAAGTAGCAGAGT+AGG 0.522118 2_2:+16475997 None:intergenic
GGGATAGCGGCGCGAGCCTG+CGG 0.522988 2_2:-16477538 Msa0241040:CDS
GCAACGATACCAATAGATTC+CGG 0.523309 2_2:+16477580 None:intergenic
AAGACACCACCTCCAAATGT+TGG 0.525330 2_2:+16476225 None:intergenic
CGGTGGCTTTCCCAGCAGCC+AGG 0.526408 2_2:-16475942 Msa0241040:CDS
GATAAAGTTCTTGATGAAGC+TGG 0.529856 2_2:-16474681 Msa0241040:CDS
CTTATTAGACCTTGCGAGGG+GGG 0.531367 2_2:-16476918 Msa0241040:CDS
GATGGATATCTAGAAGCTAC+AGG 0.533976 2_2:-16475071 Msa0241040:intron
TGGTCGTTGCTGGGAAATGA+TGG 0.534044 2_2:-16476321 Msa0241040:CDS
AGCTGAGTACCTGGCCGAGA+GGG 0.534467 2_2:+16475141 None:intergenic
CCTCTATACGAACTACCTCC+AGG 0.536475 2_2:+16475789 None:intergenic
CCGAGAGGGCGCAATTGCCA+TGG 0.536523 2_2:+16475155 None:intergenic
GTTCAAACGGATACAACCTT+AGG 0.536568 2_2:-16475290 Msa0241040:CDS
TGCTCGATCGTAGGAGCAAG+AGG 0.537333 2_2:+16475911 None:intergenic
ACCCAACTCAGCGTCCTCAA+AGG 0.537810 2_2:-16477916 Msa0241040:CDS
ATACCAATAGATTCCGGACC+AGG 0.538578 2_2:+16477586 None:intergenic
CTGTTTCCCGCAACTCTAGT+GGG 0.539369 2_2:-16477558 Msa0241040:CDS
ACCATACTGAATTTCTCCAC+TGG 0.540930 2_2:+16476581 None:intergenic
CTCCCCAGAAGATGTTGCAC+TGG 0.541488 2_2:-16475756 Msa0241040:CDS
TATACTACAAGTTTGGAAGA+TGG 0.542037 2_2:-16477127 Msa0241040:CDS
CAAGGCATCAATGCTACTGC+AGG 0.542378 2_2:-16476196 Msa0241040:intron
GGGTTCAATGATGCTGTGAA+TGG 0.547394 2_2:-16476360 Msa0241040:CDS
TTGAGTATTGTTCCCAATGG+TGG 0.547398 2_2:-16477335 Msa0241040:CDS
ATGCATAAAGAAATGGATGC+TGG 0.548344 2_2:-16479200 Msa0241040:CDS
ACCTCTTCGTGCTCGATCGT+AGG 0.549405 2_2:+16475902 None:intergenic
GAGAAACTTGCTTCTGCAGA+CGG 0.551279 2_2:+16478209 None:intergenic
TGGCTGCTGGGAAAGCCACC+GGG 0.551326 2_2:+16475944 None:intergenic
AGATCATTGAATGCTTCTAC+TGG 0.553028 2_2:-16477002 Msa0241040:CDS
GGTGCAGATGATTGGGATGA+AGG 0.553628 2_2:-16477702 Msa0241040:intron
GGAGAAATTCAGTATGGTGG+CGG 0.556309 2_2:-16476576 Msa0241040:CDS
GAGAAATTCAGTATGGTGGC+GGG 0.558050 2_2:-16476575 Msa0241040:CDS
AAGTTTGGTTTCAAAACCGA+AGG 0.558405 2_2:-16479037 Msa0241040:intron
GTGTTGTGGCATCAGTTCAG+AGG 0.560143 2_2:-16475182 Msa0241040:CDS
AAGTTCTTGATGAAGCTGGC+AGG 0.560167 2_2:-16474677 Msa0241040:CDS
TGTTGTGGCATCAGTTCAGA+GGG 0.563344 2_2:-16475181 Msa0241040:CDS
CTCACAAAATTTGACGGAGA+AGG 0.564082 2_2:+16476966 None:intergenic
TTGACGGAGAAGGCCCTGTA+GGG 0.564292 2_2:+16476976 None:intergenic
AGAGAGAAAACAGAGAGAGA+AGG 0.566058 2_2:+16479397 Msa0241050:intron
AGCACATAATTGCATCAGAA+TGG 0.566597 2_2:+16474888 None:intergenic
AGTATTGTTCCCAATGGTGG+TGG 0.568354 2_2:-16477332 Msa0241040:CDS
TTCCTTATTAGACCTTGCGA+GGG 0.569278 2_2:-16476921 Msa0241040:CDS
ATGTTCCCAACATTTGGAGG+TGG 0.569970 2_2:-16476231 Msa0241040:CDS
CAATTGTAAGGACCGACCTA+AGG 0.571125 2_2:+16475274 None:intergenic
ACGCACATACTGGCGAGCCA+TGG 0.571373 2_2:+16475206 None:intergenic
ATCAGTTCAGAGGGTTGCCA+TGG 0.571681 2_2:-16475172 Msa0241040:CDS
GGTTCAATGTTAGAAAGGAT+AGG 0.572911 2_2:+16479071 None:intergenic
AAGCCACCGGGTCTTGGACA+CGG 0.573476 2_2:+16475956 None:intergenic
AAAACAGAGAGAGAAGGTGT+TGG 0.574621 2_2:+16479403 Msa0241050:intron
CCGCTATCCCACTAGAGTTG+CGG 0.574881 2_2:+16477551 None:intergenic
TTTCCTTATTAGACCTTGCG+AGG 0.575216 2_2:-16476922 Msa0241040:CDS
GAACCAGCACCTTCACCAGA+TGG 0.575410 2_2:+16475309 None:intergenic
GGAGTGTCCCTGAAGTTCTG+AGG 0.576646 2_2:-16476765 Msa0241040:CDS
TCCAACCACATCAAGAACAT+TGG 0.578165 2_2:-16475361 Msa0241040:CDS
TTCTATTAGTCTTCTCGCCG+TGG 0.578172 2_2:-16477780 Msa0241040:intron
CTTATGAGCAAGCCATTGCA+TGG 0.582458 2_2:-16474456 Msa0241040:CDS
GTTGGCAGAGAGAGATGGGA+TGG 0.582855 2_2:+16479421 Msa0241050:intron
TTTGACGGAGAAGGCCCTGT+AGG 0.582982 2_2:+16476975 None:intergenic
TTAACTGATTTAGGATCCAA+GGG 0.583082 2_2:+16475488 None:intergenic
GAGTTCCTATCTAAGGCTAC+CGG 0.583759 2_2:-16477740 Msa0241040:CDS
ACTTATATATATAGTCATAG+AGG 0.584899 2_2:+16474204 None:intergenic
AATAGAGCTTATGTACATGC+AGG 0.586783 2_2:-16477303 Msa0241040:intron
GATGACGGTTGGTCGTTGCT+GGG 0.587967 2_2:-16476330 Msa0241040:CDS
ATGCCGTGAGAAGCAAAGAA+AGG 0.588074 2_2:-16478302 Msa0241040:CDS
GGGATGCAAACAACCCAGCT+GGG 0.589348 2_2:-16477895 Msa0241040:intron
CTTGATACACAAATCCCTCC+TGG 0.589795 2_2:+16474496 None:intergenic
GTGAATGGATTTGTCGATGA+CGG 0.594332 2_2:-16476345 Msa0241040:CDS
GCAGTTCCGTGTCCAAGACC+CGG 0.594391 2_2:-16475962 Msa0241040:CDS
TTTGGAAGATGGAAGTCTTG+TGG 0.594978 2_2:-16477116 Msa0241040:intron
ATGGATTTGTCGATGACGGT+TGG 0.598019 2_2:-16476341 Msa0241040:CDS
CCTTATTAGACCTTGCGAGG+GGG 0.598121 2_2:-16476919 Msa0241040:CDS
TGCAAAGGATTCATCTATAG+GGG 0.599441 2_2:+16475550 None:intergenic
AGACAATAGCTGTGATTCTG+TGG 0.600443 2_2:-16477966 Msa0241040:CDS
AAGCTCATGCTTTGGCACGA+TGG 0.600650 2_2:-16475089 Msa0241040:CDS
CCGCAACTCTAGTGGGATAG+CGG 0.602930 2_2:-16477551 Msa0241040:CDS
CTCTTTCATAGAAAATGGTG+AGG 0.604373 2_2:+16479358 None:intergenic
CTGGAGGTAGTTCGTATAGA+GGG 0.605982 2_2:-16475788 Msa0241040:CDS
AACTTGTTGCAGCTTTGCAG+TGG 0.607045 2_2:-16475617 Msa0241040:intron
TCCTACGATCGAGCACGAAG+AGG 0.610109 2_2:-16475903 Msa0241040:intron
GAAAATGGTGAGGTTGAAGG+TGG 0.611244 2_2:+16479368 None:intergenic
AGAGGGGCCTCAGAACTTCA+GGG 0.614871 2_2:+16476758 None:intergenic
AGGTGGTGTCTTGTGTGCCA+AGG 0.616015 2_2:-16476214 Msa0241040:CDS
TAAATCCAATGTTCTTGATG+TGG 0.616299 2_2:+16475356 None:intergenic
TAAGAGGGCATCATCTGCAA+AGG 0.617843 2_2:+16475535 None:intergenic
TGCCAGGGTCTCCTCAGCCA+CGG 0.620608 2_2:+16477763 None:intergenic
GAGCAAGAGGTAAAATGACC+TGG 0.621422 2_2:+16475924 None:intergenic
TCCTTATTAGACCTTGCGAG+GGG 0.621648 2_2:-16476920 Msa0241040:CDS
TCATTGAATGCTTCTACTGG+TGG 0.625641 2_2:-16476999 Msa0241040:CDS
AAGTTCTCAAAACAGCTGGT+TGG 0.626436 2_2:+16476550 None:intergenic
GTCGCGCAAGTGATTCTCAA+AGG 0.627622 2_2:+16475239 None:intergenic
CTTAGATAGGAACTCTGCCA+GGG 0.627679 2_2:+16477748 None:intergenic
TACTCAATACATCAACGCAT+CGG 0.631222 2_2:+16477351 None:intergenic
ATGGCTTGCTCATAAGACAC+TGG 0.631254 2_2:+16474463 None:intergenic
GTTATGCATCTCTGCCAGGA+GGG 0.632885 2_2:-16474510 Msa0241040:CDS
GTATTGAGTATTGTTCCCAA+TGG 0.633613 2_2:-16477338 Msa0241040:CDS
AATGCTCGTCCATCTGGTGA+AGG 0.634918 2_2:-16475318 Msa0241040:CDS
AAGGTGTTACTAACCCAGCT+GGG 0.638352 2_2:+16477882 None:intergenic
TGTGAGTCTAGAGCCCACTA+AGG 0.639840 2_2:-16477512 Msa0241040:intron
ATGGTTTCTCCATCAGACAA+AGG 0.640205 2_2:+16474375 None:intergenic
AAAACCAGAAGGCAATAAGA+GGG 0.641093 2_2:+16475520 None:intergenic
CCAGTATGTGCGTAGTGTTG+TGG 0.642038 2_2:-16475196 Msa0241040:CDS
GAATCACTTGCGCGACAATG+TGG 0.642715 2_2:-16475232 Msa0241040:CDS
AGTGGAGAAATTCAGTATGG+TGG 0.644496 2_2:-16476579 Msa0241040:CDS
CAGATAGCACAAGAATCCAG+TGG 0.652309 2_2:-16476597 Msa0241040:CDS
GGAATAACTCGAAAACCAGA+AGG 0.653126 2_2:+16475509 None:intergenic
CAATATTGCATCACTCGCTG+CGG 0.656475 2_2:+16474925 None:intergenic
TTCTTAAAGATAGACTGTCA+TGG 0.657592 2_2:-16477385 Msa0241040:CDS
GGTCTAATAAGGAAACCACT+AGG 0.658788 2_2:+16476930 None:intergenic
TGCCAGTGCAACATCTTCTG+GGG 0.660194 2_2:+16475754 None:intergenic
CAGTGAAGGAGAGTAGTGTG+TGG 0.661146 2_2:+16479453 Msa0241050:intron
AGAATCACAGCTATTGTCTG+TGG 0.665084 2_2:+16477970 None:intergenic
TGCATTGGTGCAGTTCCTGG+AGG 0.665564 2_2:-16475804 Msa0241040:intron
AAGCTGAGTACCTGGCCGAG+AGG 0.669722 2_2:+16475140 None:intergenic
GGTTATGCATCTCTGCCAGG+AGG 0.674411 2_2:-16474511 Msa0241040:CDS
AATCGAACAAGCAAAGCAGG+AGG 0.677556 2_2:+16476064 None:intergenic
GATGGAACAAGAAACAGTGA+AGG 0.678037 2_2:+16479439 Msa0241050:intron
TAGTGGGCTCTAGACTCACA+AGG 0.690812 2_2:+16477515 None:intergenic
TGTGATTCTGTGGTAATGAG+TGG 0.695611 2_2:-16477956 Msa0241040:CDS
AGAGCTGAAATGCTTCCTAG+TGG 0.697674 2_2:-16476945 Msa0241040:CDS
GTTCCGTGTCCAAGACCCGG+TGG 0.700440 2_2:-16475959 Msa0241040:CDS
TTGGACACGGAACTGCATAG+GGG 0.719102 2_2:+16475969 None:intergenic
AAACGGATACAACCTTAGGT+CGG 0.721957 2_2:-16475286 Msa0241040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTTACTAAATTTTAAAA+GGG + chr2_2:16474970-16474989 None:intergenic 10.0%
!!! AAATGTTACTAAATTTTAAA+AGG + chr2_2:16474971-16474990 None:intergenic 10.0%
!! AATTGTAATAATAAAATGAT+AGG + chr2_2:16476511-16476530 None:intergenic 10.0%
!! TTCATAATGACAAAAAAAAA+TGG + chr2_2:16474682-16474701 None:intergenic 15.0%
!! AATGTTACAAAATATTCAAA+GGG + chr2_2:16474779-16474798 None:intergenic 15.0%
!! AAATGTTACAAAATATTCAA+AGG + chr2_2:16474780-16474799 None:intergenic 15.0%
!! AATAATCAAGTAAAATAACT+TGG + chr2_2:16475220-16475239 None:intergenic 15.0%
!!! TTTCTTTTGTAGAATAAATT+AGG + chr2_2:16476313-16476332 None:intergenic 15.0%
!!! CTTGCATTTTAAATATTTAA+AGG + chr2_2:16479413-16479432 Msa0241050:intron 15.0%
!!! TTAAAATGCAAGTTTTATTT+TGG - chr2_2:16479421-16479440 Msa0241040:five_prime_UTR 15.0%
!!! TAAAATGCAAGTTTTATTTT+GGG - chr2_2:16479422-16479441 Msa0241040:five_prime_UTR 15.0%
!!! TTTCTTTTTTCCTTTAACAA+TGG - chr2_2:16474358-16474377 Msa0241040:three_prime_UTR 20.0%
!!! GAAAAAATGTTTTCACTTTT+TGG - chr2_2:16474645-16474664 Msa0241040:CDS 20.0%
!!! TTTTTGTCATTATGAAAGAA+AGG - chr2_2:16474686-16474705 Msa0241040:CDS 20.0%
!!! TTTGAATGAAAATAACTTGT+GGG - chr2_2:16474712-16474731 Msa0241040:CDS 20.0%
!! TTGAAAGAATGAACAAAAAA+AGG + chr2_2:16474857-16474876 None:intergenic 20.0%
!! TTAAGAAAAAAAGAACTTTG+TGG - chr2_2:16474897-16474916 Msa0241040:CDS 20.0%
!!! TAATTTCAAAAGCACATTTT+TGG + chr2_2:16475070-16475089 None:intergenic 20.0%
!! ATTTATTGAAATGATTATGC+TGG - chr2_2:16476552-16476571 Msa0241040:CDS 20.0%
!!! GGTATTTAACATTTTTTTTC+AGG - chr2_2:16476798-16476817 Msa0241040:intron 20.0%
!!! TTAACATTTTTTTTCAGGTT+TGG - chr2_2:16476803-16476822 Msa0241040:intron 20.0%
!!! TGAGAGTATGAATAATAAAT+TGG + chr2_2:16477162-16477181 None:intergenic 20.0%
!! TATTATTATGTGCTTATTTG+CGG - chr2_2:16477757-16477776 Msa0241040:CDS 20.0%
!!! TTGTATATTTTGAAGTAGTA+AGG - chr2_2:16477904-16477923 Msa0241040:CDS 20.0%
!! GTAAAAACAAATGTAATAAC+TGG - chr2_2:16478729-16478748 Msa0241040:intron 20.0%
!!! TATGCAATTTAATTTGAACA+TGG - chr2_2:16479003-16479022 Msa0241040:intron 20.0%
!!! TGGAATTTTTTGAATAACTT+AGG - chr2_2:16479023-16479042 Msa0241040:intron 20.0%
!! AAAGTTAAGTATCTTGATTA+TGG + chr2_2:16479236-16479255 None:intergenic 20.0%
!! ACTTATATATATAGTCATAG+AGG + chr2_2:16479388-16479407 Msa0241050:intron 20.0%
! ACTTTCTATGCATAAAGAAA+TGG - chr2_2:16474382-16474401 Msa0241040:exon 25.0%
! AAAACTGAAAAGTTTACCTT+CGG + chr2_2:16474571-16474590 None:intergenic 25.0%
!!! AAATGTTTTCACTTTTTGGT+TGG - chr2_2:16474649-16474668 Msa0241040:CDS 25.0%
! CTTTGAATGAAAATAACTTG+TGG - chr2_2:16474711-16474730 Msa0241040:CDS 25.0%
!! TTGAATGAAAATAACTTGTG+GGG - chr2_2:16474713-16474732 Msa0241040:CDS 25.0%
! GATAAAAGAAAGAACTTTGA+AGG - chr2_2:16474803-16474822 Msa0241040:intron 25.0%
! TGAAACAAAACATTAATGCT+TGG - chr2_2:16475022-16475041 Msa0241040:intron 25.0%
!!! AAACATTAATGCTTGGTTTT+TGG - chr2_2:16475029-16475048 Msa0241040:intron 25.0%
! AAGAAATTTAAATGCCAAAG+GGG + chr2_2:16475124-16475143 None:intergenic 25.0%
! CAAGAAATTTAAATGCCAAA+GGG + chr2_2:16475125-16475144 None:intergenic 25.0%
! ACAAGAAATTTAAATGCCAA+AGG + chr2_2:16475126-16475145 None:intergenic 25.0%
!! ATGTAGTTTTCTGCATTTAA+TGG - chr2_2:16475168-16475187 Msa0241040:CDS 25.0%
! CCTATTCAAAAAGAAAAAGT+TGG + chr2_2:16475584-16475603 None:intergenic 25.0%
!!! CCAACTTTTTCTTTTTGAAT+AGG - chr2_2:16475581-16475600 Msa0241040:CDS 25.0%
! ACACAATGCAACAAAAAAAA+AGG + chr2_2:16475729-16475748 None:intergenic 25.0%
!! TGACCTATTGAACAATTTTA+TGG - chr2_2:16475929-16475948 Msa0241040:CDS 25.0%
! CAACCATAAAATTGTTCAAT+AGG + chr2_2:16475935-16475954 None:intergenic 25.0%
! CAACAAAATAATACCTTAGT+GGG + chr2_2:16476093-16476112 None:intergenic 25.0%
! ACAACAAAATAATACCTTAG+TGG + chr2_2:16476094-16476113 None:intergenic 25.0%
! GTGATCAACAATATGAATAA+TGG + chr2_2:16476702-16476721 None:intergenic 25.0%
! ATGCAAATACAAAATACTGA+AGG + chr2_2:16477735-16477754 None:intergenic 25.0%
! GGAATTGATGAAAATTCAAT+TGG - chr2_2:16477993-16478012 Msa0241040:intron 25.0%
! GTTTCATTAAATTAATGCAG+TGG + chr2_2:16478144-16478163 None:intergenic 25.0%
! AATACATCAACATATGTTTC+AGG + chr2_2:16478187-16478206 None:intergenic 25.0%
! TAAATTGGAATGCAATTGTA+AGG + chr2_2:16478330-16478349 None:intergenic 25.0%
!! TATATGTTGTTGTCTTTTTC+AGG - chr2_2:16478607-16478626 Msa0241040:intron 25.0%
! ATGCAATATTGAAACAACTT+TGG - chr2_2:16478676-16478695 Msa0241040:intron 25.0%
! AAAGTCAGAAGAATACTAAA+AGG + chr2_2:16478787-16478806 None:intergenic 25.0%
!!! ACTTTTGAGAATATTATTGC+AGG - chr2_2:16478802-16478821 Msa0241040:intron 25.0%
!!! TAATCTGTTGTTATTTTTCC+AGG - chr2_2:16479056-16479075 Msa0241040:CDS 25.0%
!!! AATCTGTTGTTATTTTTCCA+GGG - chr2_2:16479057-16479076 Msa0241040:CDS 25.0%
! TTTGTGTATCAAGTATGAAT+AGG - chr2_2:16479103-16479122 Msa0241040:CDS 25.0%
TGAAAATGATGAAGCTAGTT+TGG + chr2_2:16474305-16474324 None:intergenic 30.0%
!! ATAGAAAGTGCCATTGTTAA+AGG + chr2_2:16474371-16474390 None:intergenic 30.0%
! GTTTAGGTTCAATGTTAGAA+AGG + chr2_2:16474526-16474545 None:intergenic 30.0%
AACCTAAACAGATCAAAGTT+TGG - chr2_2:16474537-16474556 Msa0241040:intron 30.0%
AACCAAACTTTGATCTGTTT+AGG + chr2_2:16474542-16474561 None:intergenic 30.0%
! ACTTTGAAGGAAATAACTTG+TGG - chr2_2:16474816-16474835 Msa0241040:intron 30.0%
! CTTTGAAGGAAATAACTTGT+GGG - chr2_2:16474817-16474836 Msa0241040:intron 30.0%
! TTTGAAGGAAATAACTTGTG+GGG - chr2_2:16474818-16474837 Msa0241040:intron 30.0%
AATTTCATTGTTCAACAGCA+AGG + chr2_2:16476130-16476149 None:intergenic 30.0%
!! TCTGTGTTTACTTTTGTCTT+AGG - chr2_2:16476172-16476191 Msa0241040:intron 30.0%
! CAGTCTATCTTTAAGAATCT+CGG + chr2_2:16476201-16476220 None:intergenic 30.0%
TTCTTAAAGATAGACTGTCA+TGG - chr2_2:16476204-16476223 Msa0241040:CDS 30.0%
ACTGAGATATACTACAAGTT+TGG - chr2_2:16476455-16476474 Msa0241040:intron 30.0%
TATACTACAAGTTTGGAAGA+TGG - chr2_2:16476462-16476481 Msa0241040:intron 30.0%
!! ATCACGTTGATTTAGATGTA+AGG - chr2_2:16476717-16476736 Msa0241040:CDS 30.0%
!! TCACGTTGATTTAGATGTAA+GGG - chr2_2:16476718-16476737 Msa0241040:CDS 30.0%
! TTGTTGAACTTTTCTGACTT+CGG - chr2_2:16476777-16476796 Msa0241040:intron 30.0%
! ATTTTTGACGATTCATAGAG+GGG + chr2_2:16476850-16476869 None:intergenic 30.0%
! GATTTTTGACGATTCATAGA+GGG + chr2_2:16476851-16476870 None:intergenic 30.0%
! AGATTTTTGACGATTCATAG+AGG + chr2_2:16476852-16476871 None:intergenic 30.0%
CTATGAATCGTCAAAAATCT+TGG - chr2_2:16476852-16476871 Msa0241040:intron 30.0%
AGATAGAGTGAGTTAGAATT+AGG + chr2_2:16477185-16477204 None:intergenic 30.0%
!! ATCTCAACAAGTTGGTTATT+AGG + chr2_2:16477471-16477490 None:intergenic 30.0%
! TTTGCTTGTTCGATTTTTGA+GGG - chr2_2:16477533-16477552 Msa0241040:CDS 30.0%
! TTAACTGATTTAGGATCCAA+GGG + chr2_2:16478104-16478123 None:intergenic 30.0%
TAAATCCAATGTTCTTGATG+TGG + chr2_2:16478236-16478255 None:intergenic 30.0%
AGAACATTGGATTTACTTGA+AGG - chr2_2:16478241-16478260 Msa0241040:CDS 30.0%
AGTGATTCTCAAAGGTAAAT+TGG + chr2_2:16478345-16478364 None:intergenic 30.0%
TGGTTTGAAAAGGTGAATAT+TGG + chr2_2:16478833-16478852 None:intergenic 30.0%
! AATATTCACCTTTTCAAACC+AGG - chr2_2:16478832-16478851 Msa0241040:intron 30.0%
AATTACCTGTTGCATAATCT+TGG + chr2_2:16478960-16478979 None:intergenic 30.0%
ATTAAGAACTTTCCATGCAA+TGG + chr2_2:16479148-16479167 None:intergenic 30.0%
GAAAATTAGTACAACTGTCT+TGG + chr2_2:16479327-16479346 None:intergenic 30.0%
GAGCATTAGAATAGTTCAAA+AGG + chr2_2:16479366-16479385 None:intergenic 30.0%
ATAGAAAATGGTGAGGTTGA+AGG + chr2_2:16474227-16474246 None:intergenic 35.0%
CTCTTTCATAGAAAATGGTG+AGG + chr2_2:16474234-16474253 None:intergenic 35.0%
CCACTCTCTTTCATAGAAAA+TGG + chr2_2:16474239-16474258 None:intergenic 35.0%
! CCATTTTCTATGAAAGAGAG+TGG - chr2_2:16474236-16474255 Msa0241040:three_prime_UTR 35.0%
! TTTTCTATGAAAGAGAGTGG+AGG - chr2_2:16474239-16474258 Msa0241040:three_prime_UTR 35.0%
ATGCATAAAGAAATGGATGC+TGG - chr2_2:16474389-16474408 Msa0241040:CDS 35.0%
TGGATGCTGGTAAATATGTA+AGG - chr2_2:16474402-16474421 Msa0241040:CDS 35.0%
TGTTGTCTTCTCAAAGAACT+AGG + chr2_2:16474482-16474501 None:intergenic 35.0%
GGTTCAATGTTAGAAAGGAT+AGG + chr2_2:16474521-16474540 None:intergenic 35.0%
! AAGTTTGGTTTCAAAACCGA+AGG - chr2_2:16474552-16474571 Msa0241040:intron 35.0%
!!! GTTTTCACTTTTTGGTTGGT+TGG - chr2_2:16474653-16474672 Msa0241040:CDS 35.0%
AAGAACTTTGTGGAGAATGA+TGG - chr2_2:16474907-16474926 Msa0241040:CDS 35.0%
AAAGGGGTTAATAACATCAC+TGG + chr2_2:16475108-16475127 None:intergenic 35.0%
AGTGATGTTATTAACCCCTT+TGG - chr2_2:16475107-16475126 Msa0241040:CDS 35.0%
TCTGCATTTAATGGTGAATG+TGG - chr2_2:16475177-16475196 Msa0241040:CDS 35.0%
TGAATGTGGTTTCTGCATAA+TGG - chr2_2:16475191-16475210 Msa0241040:CDS 35.0%
TCTCATCTGGTGTATGAAAA+TGG - chr2_2:16475399-16475418 Msa0241040:intron 35.0%
TTTAATGTCTTTGTGTAGCC+TGG - chr2_2:16475985-16476004 Msa0241040:CDS 35.0%
TACTCAATACATCAACGCAT+CGG + chr2_2:16476241-16476260 None:intergenic 35.0%
! GTATTGAGTATTGTTCCCAA+TGG - chr2_2:16476251-16476270 Msa0241040:CDS 35.0%
AATAGAGCTTATGTACATGC+AGG - chr2_2:16476286-16476305 Msa0241040:CDS 35.0%
AGATCATTGAATGCTTCTAC+TGG - chr2_2:16476587-16476606 Msa0241040:CDS 35.0%
TCAGCTCTCACAAAATTTGA+CGG + chr2_2:16476632-16476651 None:intergenic 35.0%
! CATTTTAAACTCCACTTTGC+AGG - chr2_2:16476952-16476971 Msa0241040:CDS 35.0%
CTAAAAGTTCTCAAAACAGC+TGG + chr2_2:16477046-16477065 None:intergenic 35.0%
! CTTGACACCTTTCATTTTCA+GGG - chr2_2:16477207-16477226 Msa0241040:intron 35.0%
! TTGACACCTTTCATTTTCAG+GGG - chr2_2:16477208-16477227 Msa0241040:intron 35.0%
! TCGTCTCCAAACAAGTTTTT+GGG - chr2_2:16477319-16477338 Msa0241040:CDS 35.0%
TGGGAACATTGATGAATAGT+TGG + chr2_2:16477347-16477366 None:intergenic 35.0%
TCATCAATGTTCCCAACATT+TGG - chr2_2:16477352-16477371 Msa0241040:CDS 35.0%
!! TCAACAAGTTGGTTATTAGG+AGG + chr2_2:16477468-16477487 None:intergenic 35.0%
TCAGAAAGATCTCAACAAGT+TGG + chr2_2:16477479-16477498 None:intergenic 35.0%
AAAAATCGAACAAGCAAAGC+AGG + chr2_2:16477531-16477550 None:intergenic 35.0%
! CTTTGCTTGTTCGATTTTTG+AGG - chr2_2:16477532-16477551 Msa0241040:CDS 35.0%
TTATTTGCGGTATGTTGCAT+TGG - chr2_2:16477770-16477789 Msa0241040:CDS 35.0%
! ACGTGATATGTATCTTTTGC+AGG - chr2_2:16477857-16477876 Msa0241040:intron 35.0%
CAACAAGTTTCATACACAGA+AGG + chr2_2:16477961-16477980 None:intergenic 35.0%
TGCAAAGGATTCATCTATAG+GGG + chr2_2:16478042-16478061 None:intergenic 35.0%
CTGCAAAGGATTCATCTATA+GGG + chr2_2:16478043-16478062 None:intergenic 35.0%
TCTGCAAAGGATTCATCTAT+AGG + chr2_2:16478044-16478063 None:intergenic 35.0%
AAAACCAGAAGGCAATAAGA+GGG + chr2_2:16478072-16478091 None:intergenic 35.0%
! CTTAACTGATTTAGGATCCA+AGG + chr2_2:16478105-16478124 None:intergenic 35.0%
AGCACATAATTGCATCAGAA+TGG + chr2_2:16478704-16478723 None:intergenic 35.0%
GATAAAGTTCTTGATGAAGC+TGG - chr2_2:16478908-16478927 Msa0241040:intron 35.0%
TAGCTTTCATGTTCATCAAC+TGG - chr2_2:16479190-16479209 Msa0241040:CDS 35.0%
GATGGAACAAGAAACAGTGA+AGG + chr2_2:16474153-16474172 None:intergenic 40.0%
! AAAACAGAGAGAGAAGGTGT+TGG + chr2_2:16474189-16474208 None:intergenic 40.0%
AGAGAGAAAACAGAGAGAGA+AGG + chr2_2:16474195-16474214 None:intergenic 40.0%
! TCCTGAACAAGTTGAAGCTT+TGG - chr2_2:16474430-16474449 Msa0241040:CDS 40.0%
! TCCAAAGCTTCAACTTGTTC+AGG + chr2_2:16474434-16474453 None:intergenic 40.0%
CTTCTCAAAGAACTAGGCTT+AGG + chr2_2:16474476-16474495 None:intergenic 40.0%
! GAAATAACTTGTGGGGTGTT+TGG - chr2_2:16474825-16474844 Msa0241040:intron 40.0%
CTTCCTTTCTTTGCTTCTCA+CGG + chr2_2:16475293-16475312 None:intergenic 40.0%
CACGTTTACAGACAGTGAAT+AGG - chr2_2:16475316-16475335 Msa0241040:CDS 40.0%
TGCAATGAACAAGCTCTTGA+TGG - chr2_2:16475347-16475366 Msa0241040:CDS 40.0%
AGAATCACAGCTATTGTCTG+TGG + chr2_2:16475622-16475641 None:intergenic 40.0%
AGACAATAGCTGTGATTCTG+TGG - chr2_2:16475623-16475642 Msa0241040:intron 40.0%
! TGTGATTCTGTGGTAATGAG+TGG - chr2_2:16475633-16475652 Msa0241040:intron 40.0%
GCAACGATACCAATAGATTC+CGG + chr2_2:16476012-16476031 None:intergenic 40.0%
TTCATTGTTCAACAGCAAGG+AGG + chr2_2:16476127-16476146 None:intergenic 40.0%
! TTGAGTATTGTTCCCAATGG+TGG - chr2_2:16476254-16476273 Msa0241040:CDS 40.0%
TTTGGAAGATGGAAGTCTTG+TGG - chr2_2:16476473-16476492 Msa0241040:intron 40.0%
TCATTGAATGCTTCTACTGG+TGG - chr2_2:16476590-16476609 Msa0241040:CDS 40.0%
CTCACAAAATTTGACGGAGA+AGG + chr2_2:16476626-16476645 None:intergenic 40.0%
GGTCTAATAAGGAAACCACT+AGG + chr2_2:16476662-16476681 None:intergenic 40.0%
TTTCCTTATTAGACCTTGCG+AGG - chr2_2:16476667-16476686 Msa0241040:intron 40.0%
TTCCTTATTAGACCTTGCGA+GGG - chr2_2:16476668-16476687 Msa0241040:intron 40.0%
TCCAGTGGAGAAATTCAGTA+TGG - chr2_2:16477007-16477026 Msa0241040:CDS 40.0%
ACCATACTGAATTTCTCCAC+TGG + chr2_2:16477011-16477030 None:intergenic 40.0%
AGTGGAGAAATTCAGTATGG+TGG - chr2_2:16477010-16477029 Msa0241040:CDS 40.0%
AAGTTCTCAAAACAGCTGGT+TGG + chr2_2:16477042-16477061 None:intergenic 40.0%
! CTTTTAGTCAGAGACTTTGC+AGG - chr2_2:16477059-16477078 Msa0241040:intron 40.0%
!! CCTGAAAATGAAAGGTGTCA+AGG + chr2_2:16477209-16477228 None:intergenic 40.0%
! CCTTGACACCTTTCATTTTC+AGG - chr2_2:16477206-16477225 Msa0241040:intron 40.0%
!! TGACACCTTTCATTTTCAGG+GGG - chr2_2:16477209-16477228 Msa0241040:intron 40.0%
TTGAACCCCCTGAAAATGAA+AGG + chr2_2:16477217-16477236 None:intergenic 40.0%
! GTGAATGGATTTGTCGATGA+CGG - chr2_2:16477244-16477263 Msa0241040:intron 40.0%
! CTCGTCTCCAAACAAGTTTT+TGG - chr2_2:16477318-16477337 Msa0241040:CDS 40.0%
! CGTCTCCAAACAAGTTTTTG+GGG - chr2_2:16477320-16477339 Msa0241040:CDS 40.0%
! TTGGACCCCAAAAACTTGTT+TGG + chr2_2:16477328-16477347 None:intergenic 40.0%
TCAATGTTCCCAACATTTGG+AGG - chr2_2:16477355-16477374 Msa0241040:CDS 40.0%
GAAAACCAGAAGGCAATAAG+AGG + chr2_2:16478073-16478092 None:intergenic 40.0%
GGAATAACTCGAAAACCAGA+AGG + chr2_2:16478083-16478102 None:intergenic 40.0%
!!! TGGTTTTCGAGTTATTCCCT+TGG - chr2_2:16478085-16478104 Msa0241040:intron 40.0%
TGTATTGAATTCTGCATCGC+AGG - chr2_2:16478201-16478220 Msa0241040:CDS 40.0%
TCCAACCACATCAAGAACAT+TGG - chr2_2:16478228-16478247 Msa0241040:CDS 40.0%
TCCAATGTTCTTGATGTGGT+TGG + chr2_2:16478232-16478251 None:intergenic 40.0%
GTTCAAACGGATACAACCTT+AGG - chr2_2:16478299-16478318 Msa0241040:CDS 40.0%
AAACGGATACAACCTTAGGT+CGG - chr2_2:16478303-16478322 Msa0241040:CDS 40.0%
GATGGATATCTAGAAGCTAC+AGG - chr2_2:16478518-16478537 Msa0241040:intron 40.0%
! GGACTCAACTCTAAAAAGCT+CGG + chr2_2:16478646-16478665 None:intergenic 40.0%
GTTCTCCAAGATTATGCAAC+AGG - chr2_2:16478952-16478971 Msa0241040:intron 40.0%
CATGAAAGCTAAGCAGTGAT+TGG + chr2_2:16479181-16479200 None:intergenic 40.0%
ATGGTTTCTCCATCAGACAA+AGG + chr2_2:16479217-16479236 None:intergenic 40.0%
CAACTGTCTTGGATAGTATC+AGG + chr2_2:16479316-16479335 None:intergenic 40.0%
GAAAATGGTGAGGTTGAAGG+TGG + chr2_2:16474224-16474243 None:intergenic 45.0%
GTTCTTCTTCTTCACTCTGC+AGG + chr2_2:16474283-16474302 None:intergenic 45.0%
ATGCCGTGAGAAGCAAAGAA+AGG - chr2_2:16475287-16475306 Msa0241040:CDS 45.0%
! GAGAAACTTGCTTCTGCAGA+CGG + chr2_2:16475383-16475402 None:intergenic 45.0%
GCAGAAGCAAGTTTCTCATC+TGG - chr2_2:16475386-16475405 Msa0241040:intron 45.0%
!! AAGGTGTTACTAACCCAGCT+GGG + chr2_2:16475710-16475729 None:intergenic 45.0%
!! AAAGGTGTTACTAACCCAGC+TGG + chr2_2:16475711-16475730 None:intergenic 45.0%
!! TTCTATTAGTCTTCTCGCCG+TGG - chr2_2:16475809-16475828 Msa0241040:intron 45.0%
CTTAGATAGGAACTCTGCCA+GGG + chr2_2:16475844-16475863 None:intergenic 45.0%
! GAGTTCCTATCTAAGGCTAC+CGG - chr2_2:16475849-16475868 Msa0241040:intron 45.0%
ATACCAATAGATTCCGGACC+AGG + chr2_2:16476006-16476025 None:intergenic 45.0%
AGTATTGTTCCCAATGGTGG+TGG - chr2_2:16476257-16476276 Msa0241040:CDS 45.0%
ATTGTACCACCACCACCATT+GGG + chr2_2:16476269-16476288 None:intergenic 45.0%
TATTGTACCACCACCACCAT+TGG + chr2_2:16476270-16476289 None:intergenic 45.0%
AGAGCTGAAATGCTTCCTAG+TGG - chr2_2:16476644-16476663 Msa0241040:intron 45.0%
TCCTTATTAGACCTTGCGAG+GGG - chr2_2:16476669-16476688 Msa0241040:intron 45.0%
CAGATAGCACAAGAATCCAG+TGG - chr2_2:16476992-16477011 Msa0241040:CDS 45.0%
GGAGAAATTCAGTATGGTGG+CGG - chr2_2:16477013-16477032 Msa0241040:CDS 45.0%
GAGAAATTCAGTATGGTGGC+GGG - chr2_2:16477014-16477033 Msa0241040:CDS 45.0%
TAGTCAGAGACTTTGCAGGT+AGG - chr2_2:16477063-16477082 Msa0241040:intron 45.0%
AGTCAGAGACTTTGCAGGTA+GGG - chr2_2:16477064-16477083 Msa0241040:intron 45.0%
TTGAATCGTGGCAGCATGTT+AGG + chr2_2:16477091-16477110 None:intergenic 45.0%
GGGTTCAATGATGCTGTGAA+TGG - chr2_2:16477229-16477248 Msa0241040:intron 45.0%
! ATGGATTTGTCGATGACGGT+TGG - chr2_2:16477248-16477267 Msa0241040:intron 45.0%
ATGTTCCCAACATTTGGAGG+TGG - chr2_2:16477358-16477377 Msa0241040:CDS 45.0%
AGACACCACCTCCAAATGTT+GGG + chr2_2:16477366-16477385 None:intergenic 45.0%
AAGACACCACCTCCAAATGT+TGG + chr2_2:16477367-16477386 None:intergenic 45.0%
AATCGAACAAGCAAAGCAGG+AGG + chr2_2:16477528-16477547 None:intergenic 45.0%
!! CGATCAGAATGGGCTGATTA+TGG - chr2_2:16477561-16477580 Msa0241040:CDS 45.0%
CTTGAGACAAGTAGCAGAGT+AGG + chr2_2:16477595-16477614 None:intergenic 45.0%
GAGCAAGAGGTAAAATGACC+TGG + chr2_2:16477668-16477687 None:intergenic 45.0%
CTGGAGGTAGTTCGTATAGA+GGG - chr2_2:16477801-16477820 Msa0241040:intron 45.0%
!! AACTTGTTGCAGCTTTGCAG+TGG - chr2_2:16477972-16477991 Msa0241040:CDS 45.0%
!! TAAGAGGGCATCATCTGCAA+AGG + chr2_2:16478057-16478076 None:intergenic 45.0%
TTGAATTCTGCATCGCAGGA+CGG - chr2_2:16478205-16478224 Msa0241040:CDS 45.0%
TCTAGTAATGCTCGTCCATC+TGG - chr2_2:16478265-16478284 Msa0241040:CDS 45.0%
CAATTGTAAGGACCGACCTA+AGG + chr2_2:16478318-16478337 None:intergenic 45.0%
TGTTGTGGCATCAGTTCAGA+GGG - chr2_2:16478408-16478427 Msa0241040:intron 45.0%
!!! GTCTTTTTCAGGATGCACAC+TGG - chr2_2:16478618-16478637 Msa0241040:intron 45.0%
CAATATTGCATCACTCGCTG+CGG + chr2_2:16478667-16478686 None:intergenic 45.0%
! TTCACCTTTTCAAACCAGGC+TGG - chr2_2:16478836-16478855 Msa0241040:intron 45.0%
! TAGTCCAGCCTGGTTTGAAA+AGG + chr2_2:16478843-16478862 None:intergenic 45.0%
AAGTTCTTGATGAAGCTGGC+AGG - chr2_2:16478912-16478931 Msa0241040:intron 45.0%
CTTGATACACAAATCCCTCC+TGG + chr2_2:16479096-16479115 None:intergenic 45.0%
!! ATGGCTTGCTCATAAGACAC+TGG + chr2_2:16479129-16479148 None:intergenic 45.0%
CTTATGAGCAAGCCATTGCA+TGG - chr2_2:16479133-16479152 Msa0241040:CDS 45.0%
TCAACTGGTCCTTTGTCTGA+TGG - chr2_2:16479205-16479224 Msa0241040:CDS 45.0%
!! ATTTATTTATAGATAAATAT+TGG - chr2_2:16474987-16475006 Msa0241040:intron 5.0%
CAGTGAAGGAGAGTAGTGTG+TGG + chr2_2:16474139-16474158 None:intergenic 50.0%
!! AGGTGTTGGCAGAGAGAGAT+GGG + chr2_2:16474175-16474194 None:intergenic 50.0%
!! AAGGTGTTGGCAGAGAGAGA+TGG + chr2_2:16474176-16474195 None:intergenic 50.0%
TGGTGAGGTTGAAGGTGGTA+AGG + chr2_2:16474219-16474238 None:intergenic 50.0%
AAAGAGAGTGGAGGCTCTCT+TGG - chr2_2:16474248-16474267 Msa0241040:three_prime_UTR 50.0%
!! GCTGAGTTGGGTTTTGCTGT+TGG + chr2_2:16475665-16475684 None:intergenic 50.0%
GGGTTGTTTGCATCCCTTTG+AGG + chr2_2:16475690-16475709 None:intergenic 50.0%
CCTTAGATAGGAACTCTGCC+AGG + chr2_2:16475845-16475864 None:intergenic 50.0%
CCTGGCAGAGTTCCTATCTA+AGG - chr2_2:16475842-16475861 Msa0241040:intron 50.0%
! CAGTTCCGGTAGCCTTAGAT+AGG + chr2_2:16475857-16475876 None:intergenic 50.0%
TCGACTGGGTGCAGATGATT+GGG - chr2_2:16475880-16475899 Msa0241040:intron 50.0%
GGTGCAGATGATTGGGATGA+AGG - chr2_2:16475887-16475906 Msa0241040:intron 50.0%
TGTCTTTGTGTAGCCTGGTC+CGG - chr2_2:16475990-16476009 Msa0241040:CDS 50.0%
TAGCCTGGTCCGGAATCTAT+TGG - chr2_2:16476000-16476019 Msa0241040:CDS 50.0%
CTGTTTCCCGCAACTCTAGT+GGG - chr2_2:16476031-16476050 Msa0241040:CDS 50.0%
!! TAGTGGGCTCTAGACTCACA+AGG + chr2_2:16476077-16476096 None:intergenic 50.0%
! TGTGAGTCTAGAGCCCACTA+AGG - chr2_2:16476077-16476096 Msa0241040:intron 50.0%
!! ATTGTTCCCAATGGTGGTGG+TGG - chr2_2:16476260-16476279 Msa0241040:CDS 50.0%
GACGTATGCGCCTACAACTT+TGG - chr2_2:16476410-16476429 Msa0241040:intron 50.0%
CCTTATTAGACCTTGCGAGG+GGG - chr2_2:16476670-16476689 Msa0241040:intron 50.0%
CTTATTAGACCTTGCGAGGG+GGG - chr2_2:16476671-16476690 Msa0241040:intron 50.0%
GTGTTGCAATGCCTGCAAAG+TGG + chr2_2:16476966-16476985 None:intergenic 50.0%
CATGCTGCCACGATTCAATG+CGG - chr2_2:16477093-16477112 Msa0241040:intron 50.0%
CCAAATGCCGCATTGAATCG+TGG + chr2_2:16477103-16477122 None:intergenic 50.0%
CCACGATTCAATGCGGCATT+TGG - chr2_2:16477100-16477119 Msa0241040:intron 50.0%
TGGTCGTTGCTGGGAAATGA+TGG - chr2_2:16477268-16477287 Msa0241040:intron 50.0%
!! CTGCAGTAGCATTGATGCCT+TGG + chr2_2:16477395-16477414 None:intergenic 50.0%
! CAAGGCATCAATGCTACTGC+AGG - chr2_2:16477393-16477412 Msa0241040:CDS 50.0%
!! TGAGGGAGCATCGATCAGAA+TGG - chr2_2:16477550-16477569 Msa0241040:CDS 50.0%
!! GAGGGAGCATCGATCAGAAT+GGG - chr2_2:16477551-16477570 Msa0241040:CDS 50.0%
TTGGACACGGAACTGCATAG+GGG + chr2_2:16477623-16477642 None:intergenic 50.0%
CTTGGACACGGAACTGCATA+GGG + chr2_2:16477624-16477643 None:intergenic 50.0%
TCTTGGACACGGAACTGCAT+AGG + chr2_2:16477625-16477644 None:intergenic 50.0%
GGTAAAATGACCTGGCTGCT+GGG + chr2_2:16477660-16477679 None:intergenic 50.0%
AGGTAAAATGACCTGGCTGC+TGG + chr2_2:16477661-16477680 None:intergenic 50.0%
! TGTTGCATTGGTGCAGTTCC+TGG - chr2_2:16477782-16477801 Msa0241040:intron 50.0%
CCTCTATACGAACTACCTCC+AGG + chr2_2:16477803-16477822 None:intergenic 50.0%
CCTGGAGGTAGTTCGTATAG+AGG - chr2_2:16477800-16477819 Msa0241040:intron 50.0%
TGCCAGTGCAACATCTTCTG+GGG + chr2_2:16477838-16477857 None:intergenic 50.0%
GTGCCAGTGCAACATCTTCT+GGG + chr2_2:16477839-16477858 None:intergenic 50.0%
GATGCCCTCTTATTGCCTTC+TGG - chr2_2:16478065-16478084 Msa0241040:intron 50.0%
AATGCTCGTCCATCTGGTGA+AGG - chr2_2:16478271-16478290 Msa0241040:CDS 50.0%
!! GGTGAAGGTGCTGGTTCAAA+CGG - chr2_2:16478286-16478305 Msa0241040:CDS 50.0%
GTCGCGCAAGTGATTCTCAA+AGG + chr2_2:16478353-16478372 None:intergenic 50.0%
GAATCACTTGCGCGACAATG+TGG - chr2_2:16478357-16478376 Msa0241040:intron 50.0%
CCACAACACTACGCACATAC+TGG + chr2_2:16478396-16478415 None:intergenic 50.0%
CCAGTATGTGCGTAGTGTTG+TGG - chr2_2:16478393-16478412 Msa0241040:intron 50.0%
GTGTTGTGGCATCAGTTCAG+AGG - chr2_2:16478407-16478426 Msa0241040:intron 50.0%
ATCAGTTCAGAGGGTTGCCA+TGG - chr2_2:16478417-16478436 Msa0241040:intron 50.0%
TTCGCCAGAAGCTCATGCTT+TGG - chr2_2:16478492-16478511 Msa0241040:intron 50.0%
AAGCTCATGCTTTGGCACGA+TGG - chr2_2:16478500-16478519 Msa0241040:intron 50.0%
GTTATGCATCTCTGCCAGGA+GGG - chr2_2:16479079-16479098 Msa0241040:CDS 50.0%
GTTGGCAGAGAGAGATGGGA+TGG + chr2_2:16474171-16474190 None:intergenic 55.0%
ACCCAACTCAGCGTCCTCAA+AGG - chr2_2:16475673-16475692 Msa0241040:intron 55.0%
! CCCTTTGAGGACGCTGAGTT+GGG + chr2_2:16475677-16475696 None:intergenic 55.0%
CCCAACTCAGCGTCCTCAAA+GGG - chr2_2:16475674-16475693 Msa0241040:intron 55.0%
! TCCCTTTGAGGACGCTGAGT+TGG + chr2_2:16475678-16475697 None:intergenic 55.0%
AGGGATGCAAACAACCCAGC+TGG - chr2_2:16475693-16475712 Msa0241040:intron 55.0%
GGGATGCAAACAACCCAGCT+GGG - chr2_2:16475694-16475713 Msa0241040:intron 55.0%
! TACCGGAACTGCTGTCGACT+GGG - chr2_2:16475866-16475885 Msa0241040:intron 55.0%
GTCGACTGGGTGCAGATGAT+TGG - chr2_2:16475879-16475898 Msa0241040:intron 55.0%
! GCTGTTTCCCGCAACTCTAG+TGG - chr2_2:16476030-16476049 Msa0241040:CDS 55.0%
CGCTATCCCACTAGAGTTGC+GGG + chr2_2:16476040-16476059 None:intergenic 55.0%
CCGCTATCCCACTAGAGTTG+CGG + chr2_2:16476041-16476060 None:intergenic 55.0%
CCGCAACTCTAGTGGGATAG+CGG - chr2_2:16476038-16476057 Msa0241040:CDS 55.0%
CGTGCTGCAGCCAAAGTTGT+AGG + chr2_2:16476423-16476442 None:intergenic 55.0%
! TGGCTGCAGCACGAGACTTT+TGG - chr2_2:16476430-16476449 Msa0241040:intron 55.0%
CTTCTACTGGTGGCCCTACA+GGG - chr2_2:16476600-16476619 Msa0241040:CDS 55.0%
TTGACGGAGAAGGCCCTGTA+GGG + chr2_2:16476616-16476635 None:intergenic 55.0%
TTTGACGGAGAAGGCCCTGT+AGG + chr2_2:16476617-16476636 None:intergenic 55.0%
CCCCCTCGCAAGGTCTAATA+AGG + chr2_2:16476673-16476692 None:intergenic 55.0%
! GGAGTGTCCCTGAAGTTCTG+AGG - chr2_2:16476824-16476843 Msa0241040:intron 55.0%
AGAGGGGCCTCAGAACTTCA+GGG + chr2_2:16476834-16476853 None:intergenic 55.0%
TAGAGGGGCCTCAGAACTTC+AGG + chr2_2:16476835-16476854 None:intergenic 55.0%
! GATGACGGTTGGTCGTTGCT+GGG - chr2_2:16477259-16477278 Msa0241040:intron 55.0%
AGGTGGTGTCTTGTGTGCCA+AGG - chr2_2:16477375-16477394 Msa0241040:CDS 55.0%
TGCTCGATCGTAGGAGCAAG+AGG + chr2_2:16477681-16477700 None:intergenic 55.0%
TCCTACGATCGAGCACGAAG+AGG - chr2_2:16477686-16477705 Msa0241040:intron 55.0%
ACCTCTTCGTGCTCGATCGT+AGG + chr2_2:16477690-16477709 None:intergenic 55.0%
! TGCATTGGTGCAGTTCCTGG+AGG - chr2_2:16477785-16477804 Msa0241040:intron 55.0%
CTCCCCAGAAGATGTTGCAC+TGG - chr2_2:16477833-16477852 Msa0241040:intron 55.0%
CGTGCCAGTGCAACATCTTC+TGG + chr2_2:16477840-16477859 None:intergenic 55.0%
GAACCAGCACCTTCACCAGA+TGG + chr2_2:16478283-16478302 None:intergenic 55.0%
TTTGGCCCAAGCTGAGTACC+TGG + chr2_2:16478460-16478479 None:intergenic 55.0%
CTTGGGCCAAAGTCTCTTCC+TGG - chr2_2:16478469-16478488 Msa0241040:intron 55.0%
GGCGAACCAGGAAGAGACTT+TGG + chr2_2:16478478-16478497 None:intergenic 55.0%
CGTGCCAAAGCATGAGCTTC+TGG + chr2_2:16478499-16478518 None:intergenic 55.0%
CAAGCATGTCTAGTCCAGCC+TGG + chr2_2:16478853-16478872 None:intergenic 55.0%
CTGGCAGAGATGCATAACCC+TGG + chr2_2:16479077-16479096 None:intergenic 55.0%
CAGGGTTATGCATCTCTGCC+AGG - chr2_2:16479075-16479094 Msa0241040:CDS 55.0%
GGTTATGCATCTCTGCCAGG+AGG - chr2_2:16479078-16479097 Msa0241040:CDS 55.0%
TAGTCTTCTCGCCGTGGCTG+AGG - chr2_2:16475815-16475834 Msa0241040:intron 60.0%
CTACCGGAACTGCTGTCGAC+TGG - chr2_2:16475865-16475884 Msa0241040:intron 60.0%
CACCCAGTCGACAGCAGTTC+CGG + chr2_2:16475871-16475890 None:intergenic 60.0%
CTCTAGACTCACAAGGCCGC+AGG + chr2_2:16476070-16476089 None:intergenic 60.0%
GCTTCTACTGGTGGCCCTAC+AGG - chr2_2:16476599-16476618 Msa0241040:CDS 60.0%
ATTAGACCTTGCGAGGGGGG+CGG - chr2_2:16476674-16476693 Msa0241040:intron 60.0%
! CGATGACGGTTGGTCGTTGC+TGG - chr2_2:16477258-16477277 Msa0241040:intron 60.0%
GCAGTTCCGTGTCCAAGACC+CGG - chr2_2:16477627-16477646 Msa0241040:intron 60.0%
AAGCCACCGGGTCTTGGACA+CGG + chr2_2:16477636-16477655 None:intergenic 60.0%
! CGTCCATCTGGTGAAGGTGC+TGG - chr2_2:16478277-16478296 Msa0241040:CDS 60.0%
GCGCGACAATGTGGCTTCCA+TGG - chr2_2:16478366-16478385 Msa0241040:intron 60.0%
ACGCACATACTGGCGAGCCA+TGG + chr2_2:16478386-16478405 None:intergenic 60.0%
CCATGGCAATTGCGCCCTCT+CGG - chr2_2:16478434-16478453 Msa0241040:intron 60.0%
AGCTGAGTACCTGGCCGAGA+GGG + chr2_2:16478451-16478470 None:intergenic 60.0%
AAGCTGAGTACCTGGCCGAG+AGG + chr2_2:16478452-16478471 None:intergenic 60.0%
TCTCGGCCAGGTACTCAGCT+TGG - chr2_2:16478451-16478470 Msa0241040:intron 60.0%
CTCGGCCAGGTACTCAGCTT+GGG - chr2_2:16478452-16478471 Msa0241040:intron 60.0%
GCATGAGCTTCTGGCGAACC+AGG + chr2_2:16478490-16478509 None:intergenic 60.0%
TGCCAGGGTCTCCTCAGCCA+CGG + chr2_2:16475829-16475848 None:intergenic 65.0%
GTTCCGTGTCCAAGACCCGG+TGG - chr2_2:16477630-16477649 Msa0241040:intron 65.0%
CTGGGAAAGCCACCGGGTCT+TGG + chr2_2:16477642-16477661 None:intergenic 65.0%
TGGCTGCTGGGAAAGCCACC+GGG + chr2_2:16477648-16477667 None:intergenic 65.0%
CTGGCTGCTGGGAAAGCCAC+CGG + chr2_2:16477649-16477668 None:intergenic 65.0%
! CCGAGAGGGCGCAATTGCCA+TGG + chr2_2:16478437-16478456 None:intergenic 65.0%
ATGGATCCGCCCCCCTCGCA+AGG + chr2_2:16476683-16476702 None:intergenic 70.0%
CGGTGGCTTTCCCAGCAGCC+AGG - chr2_2:16477647-16477666 Msa0241040:intron 70.0%
GCAATTGCGCCCTCTCGGCC+AGG - chr2_2:16478439-16478458 Msa0241040:intron 70.0%
CGCCGTGGCTGAGGAGACCC+TGG - chr2_2:16475824-16475843 Msa0241040:intron 75.0%
! GGGATAGCGGCGCGAGCCTG+CGG - chr2_2:16476051-16476070 Msa0241040:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 16474131 16479480 16474131 ID=Msa0241040;Name=Msa0241040
chr2_2 mRNA 16474131 16479480 16474131 ID=Msa0241040-mRNA-1;Parent=Msa0241040;Name=Msa0241040-mRNA-1;_AED=0.14;_eAED=0.14;_QI=246|0.94|0.94|1|1|1|18|256|832
chr2_2 exon 16474131 16474533 16474131 ID=Msa0241040-mRNA-1:exon:6747;Parent=Msa0241040-mRNA-1
chr2_2 exon 16474638 16474787 16474638 ID=Msa0241040-mRNA-1:exon:6746;Parent=Msa0241040-mRNA-1
chr2_2 exon 16474883 16474982 16474883 ID=Msa0241040-mRNA-1:exon:6745;Parent=Msa0241040-mRNA-1
chr2_2 exon 16475072 16475388 16475072 ID=Msa0241040-mRNA-1:exon:6744;Parent=Msa0241040-mRNA-1
chr2_2 exon 16475493 16475627 16475493 ID=Msa0241040-mRNA-1:exon:6743;Parent=Msa0241040-mRNA-1
chr2_2 exon 16475733 16475813 16475733 ID=Msa0241040-mRNA-1:exon:6742;Parent=Msa0241040-mRNA-1
chr2_2 exon 16475904 16476092 16475904 ID=Msa0241040-mRNA-1:exon:6741;Parent=Msa0241040-mRNA-1
chr2_2 exon 16476197 16476383 16476197 ID=Msa0241040-mRNA-1:exon:6740;Parent=Msa0241040-mRNA-1
chr2_2 exon 16476531 16476637 16476531 ID=Msa0241040-mRNA-1:exon:6739;Parent=Msa0241040-mRNA-1
chr2_2 exon 16476717 16476791 16476717 ID=Msa0241040-mRNA-1:exon:6738;Parent=Msa0241040-mRNA-1
chr2_2 exon 16476878 16477033 16476878 ID=Msa0241040-mRNA-1:exon:6737;Parent=Msa0241040-mRNA-1
chr2_2 exon 16477117 16477200 16477117 ID=Msa0241040-mRNA-1:exon:6736;Parent=Msa0241040-mRNA-1
chr2_2 exon 16477304 16477417 16477304 ID=Msa0241040-mRNA-1:exon:6735;Parent=Msa0241040-mRNA-1
chr2_2 exon 16477513 16477608 16477513 ID=Msa0241040-mRNA-1:exon:6734;Parent=Msa0241040-mRNA-1
chr2_2 exon 16477703 16477793 16477703 ID=Msa0241040-mRNA-1:exon:6733;Parent=Msa0241040-mRNA-1
chr2_2 exon 16477896 16478008 16477896 ID=Msa0241040-mRNA-1:exon:6732;Parent=Msa0241040-mRNA-1
chr2_2 exon 16478165 16478324 16478165 ID=Msa0241040-mRNA-1:exon:6731;Parent=Msa0241040-mRNA-1
chr2_2 exon 16479038 16479480 16479038 ID=Msa0241040-mRNA-1:exon:6730;Parent=Msa0241040-mRNA-1
chr2_2 five_prime_UTR 16479235 16479480 16479235 ID=Msa0241040-mRNA-1:five_prime_utr;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16479038 16479234 16479038 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16478165 16478324 16478165 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16477896 16478008 16477896 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16477703 16477793 16477703 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16477513 16477608 16477513 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16477304 16477417 16477304 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16477117 16477200 16477117 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16476878 16477033 16476878 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16476717 16476791 16476717 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16476531 16476637 16476531 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16476197 16476383 16476197 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16475904 16476092 16475904 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16475733 16475813 16475733 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16475493 16475627 16475493 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16475072 16475388 16475072 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16474883 16474982 16474883 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16474638 16474787 16474638 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 CDS 16474387 16474533 16474387 ID=Msa0241040-mRNA-1:cds;Parent=Msa0241040-mRNA-1
chr2_2 three_prime_UTR 16474131 16474386 16474131 ID=Msa0241040-mRNA-1:three_prime_utr;Parent=Msa0241040-mRNA-1
Gene Sequence

>Msa0241040

ATGGCACTTTCTATGCATAAAGAAATGGATGCTGGTAAATATGTAAGGTACACTCCTGAACAAGTTGAAGCTTTGGAGAGAGTTTATTCAGAATGTCCTAAGCCTAGTTCTTTGAGAAGACAACAACTCATTAGAGAATGTCCTATCCTTTCTAACATTGAACCTAAACAGATCAAAGTTTGGTTTCAAAACCGAAGATGCCGTGAGAAGCAAAGAAAGGAAGCTTCACGTTTACAGACAGTGAATAGGAAGTTGTCTGCAATGAACAAGCTCTTGATGGAAGAGAATGACCGTCTGCAGAAGCAAGTTTCTCATCTGGTGTATGAAAATGGATACATGAAGCAACAGATTCATACTGCTTCTGCTGCAACTACCACAGACAATAGCTGTGATTCTGTGGTAATGAGTGGTCAAAACCAACAGCAAAACCCAACTCAGCGTCCTCAAAGGGATGCAAACAACCCAGCTGGTCTTCTCGCCGTGGCTGAGGAGACCCTGGCAGAGTTCCTATCTAAGGCTACCGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGAATCTATTGGTATCGTTGCTGTTTCCCGCAACTCTAGTGGGATAGCGGCGCGAGCCTGCGGCCTTGTGAGTCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATAGACTGTCATGGTATCGTGACTGCCGATGCGTTGATGTATTGAGTATTGTTCCCAATGGTGGTGGTGGTACAATAGAGCTTATGTACATGCAGACGTATGCGCCTACAACTTTGGCTGCAGCACGAGACTTTTGGACACTGAGATATACTACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGAATGCTTCTACTGGTGGCCCTACAGGGCCTTCTCCGTCAAATTTTGTGAGAGCTGAAATGCTTCCTAGTGGTTTCCTTATTAGACCTTGCGAGGGGGGCGGATCCATTATTCATATTGTTGATCACGTTGATTTAGATGTTTGGAGTGTCCCTGAAGTTCTGAGGCCCCTCTATGAATCGTCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCATTGCAACACATAAAACAGATAGCACAAGAATCCAGTGGAGAAATTCAGTATGGTGGCGGGCGCCAACCAGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTCGATGACGGTTGGTCGTTGCTGGGAAATGATGGTGTTGAAGACGTAACAATTGCTGTAAACTCGTCTCCAAACAAGTTTTTGGGGTCCAACTATTCATCAATGTTCCCAACATTTGGAGGTGGTGTCTTGTGTGCCAAGGCATCAATGCTACTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAATGGGCTGATTATGGCGTTGATGCCTACTCTGCTACTTGTCTCAAGTCTAGCCCCTATGCAGTTCCGTGTCCAAGACCCGGTGGCTTTCCCAGCAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCACGAAGAGTTCCTGGAGGTAGTTCGTATAGAGGGACATGCATTCTCCCCAGAAGATGTTGCACTGGCACGTGATATGTATCTTTTGCAGCTTTGCAGTGGAATTGATGAAAATTCAATTGGAGCATGTGCTCAACTTGTGTTTGCCCCTATAGATGAATCCTTTGCAGATGATGCCCTCTTATTGCCTTCTGGTTTTCGAGTTATTCCCTTGGATCCTAAATCAGACGGTCCAACCACATCAAGAACATTGGATTTACTTGAAGGATCTAGTAATGCTCGTCCATCTGGTGAAGGTGCTGGTTCAAACGGATACAACCTTAGGTCGGTCCTTACAATTGCATTCCAATTTACCTTTGAGAATCACTTGCGCGACAATGTGGCTTCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGCATCAGTTCAGAGGGTTGCCATGGCAATTGCGCCCTCTCGGCCAGGTACTCAGCTTGGGCCAAAGTCTCTTCCTGGTTCGCCAGAAGCTCATGCTTTGGCACGATGGATATCTAGAAGCTACAGGATGCACACTGGTGCCGAGCTTTTTAGAGTTGAGTCCGCAGCGAGTGATGCAATATTGAAACAACTTTGGCACCATTCTGATGCAATTATGTGCTGTTCTGCATCTCCAATATTCACCTTTTCAAACCAGGCTGGACTAGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATTATGCTTGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGGGTTATGCATCTCTGCCAGGAGGGATTTGTGTATCAAGTATGAATAGGCCAGTGTCTTATGAGCAAGCCATTGCATGGAAAGTTCTTAATGATGATGATGCCAATCACTGCTTAGCTTTCATGTTCATCAACTGGTCCTTTGTCTGA
Protein sequence

>Msa0241040

MALSMHKEMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAATTTDNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPNGGGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNASTGGPTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGIDENSIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPTTSRTLDLLEGSSNARPSGEGAGSNGYNLRSVLTIAFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCCSASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV*