Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410160 | sp|Q9SA69|Y1301_ARATH | 68.837 | 645 | 174 | 9 | 1 | 629 | 1 | 634 | 0.0 | 862 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410160 | A0A396HDB7 | 99.046 | 629 | 6 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1284 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa1410160 | 0.843761 | 1.148555e-58 | -8.615850e-47 |
| Msa0014770 | Msa1410160 | 0.831434 | 1.673423e-55 | -8.615850e-47 |
| Msa0025160 | Msa1410160 | 0.869142 | 3.863921e-66 | -8.615850e-47 |
| Msa0034210 | Msa1410160 | 0.811508 | 6.760186e-51 | -8.615850e-47 |
| Msa0035380 | Msa1410160 | 0.812788 | 3.553893e-51 | -8.615850e-47 |
| Msa0038530 | Msa1410160 | 0.842180 | 3.025900e-58 | -8.615850e-47 |
| Msa0050660 | Msa1410160 | 0.849125 | 3.951879e-60 | -8.615850e-47 |
| Msa0050700 | Msa1410160 | 0.851995 | 6.170862e-61 | -8.615850e-47 |
| Msa0050790 | Msa1410160 | 0.850031 | 2.207689e-60 | -8.615850e-47 |
| Msa0072520 | Msa1410160 | 0.866574 | 2.580781e-65 | -8.615850e-47 |
| Msa0080030 | Msa1410160 | 0.800828 | 1.199931e-48 | -8.615850e-47 |
| Msa0080820 | Msa1410160 | 0.822775 | 1.977974e-53 | -8.615850e-47 |
| Msa0086250 | Msa1410160 | 0.836218 | 1.064605e-56 | -8.615850e-47 |
| Msa0108630 | Msa1410160 | 0.845921 | 3.003400e-59 | -8.615850e-47 |
| Msa0113340 | Msa1410160 | 0.819765 | 9.780677e-53 | -8.615850e-47 |
| Msa1349690 | Msa1410160 | 0.813067 | 3.087209e-51 | -8.615850e-47 |
| Msa1357070 | Msa1410160 | 0.823926 | 1.064793e-53 | -8.615850e-47 |
| Msa1358290 | Msa1410160 | 0.805884 | 1.075964e-49 | -8.615850e-47 |
| Msa1362160 | Msa1410160 | 0.837714 | 4.416075e-57 | -8.615850e-47 |
| Msa1364680 | Msa1410160 | 0.803963 | 2.712632e-49 | -8.615850e-47 |
| Msa1381030 | Msa1410160 | 0.832637 | 8.436672e-56 | -8.615850e-47 |
| Msa1383310 | Msa1410160 | 0.833032 | 6.731017e-56 | -8.615850e-47 |
| Msa1384460 | Msa1410160 | 0.814065 | 1.862623e-51 | -8.615850e-47 |
| Msa1385260 | Msa1410160 | 0.822625 | 2.143542e-53 | -8.615850e-47 |
| Msa1392740 | Msa1410160 | 0.805994 | 1.020368e-49 | -8.615850e-47 |
| Msa1393780 | Msa1410160 | 0.838076 | 3.565596e-57 | -8.615850e-47 |
| Msa1396240 | Msa1410160 | 0.800519 | 1.387701e-48 | -8.615850e-47 |
| Msa1406720 | Msa1410160 | 0.809282 | 2.043546e-50 | -8.615850e-47 |
| Msa1408160 | Msa1410160 | 0.807923 | 3.986615e-50 | -8.615850e-47 |
| Msa1409410 | Msa1410160 | 0.833771 | 4.403149e-56 | -8.615850e-47 |
| Msa1410160 | Msa1411790 | 0.813585 | 2.376041e-51 | -8.615850e-47 |
| Msa1410160 | Msa1415540 | 0.801073 | 1.069574e-48 | -8.615850e-47 |
| Msa1410160 | Msa1417370 | 0.846208 | 2.508578e-59 | -8.615850e-47 |
| Msa1410160 | Msa1417930 | 0.809782 | 1.596437e-50 | -8.615850e-47 |
| Msa1410160 | Msa1431480 | 0.814222 | 1.719373e-51 | -8.615850e-47 |
| Msa1410160 | Msa1440430 | 0.827404 | 1.593692e-54 | -8.615850e-47 |
| Msa1410160 | Msa1440630 | 0.849151 | 3.886399e-60 | -8.615850e-47 |
| Msa1410160 | Msa1445530 | 0.822732 | 2.023389e-53 | -8.615850e-47 |
| Msa1410160 | Msa1448960 | 0.807299 | 5.410688e-50 | -8.615850e-47 |
| Msa1410160 | Msa1452140 | 0.814606 | 1.413935e-51 | -8.615850e-47 |
| Msa0605560 | Msa1410160 | 0.808483 | 3.029690e-50 | -8.615850e-47 |
| Msa0612520 | Msa1410160 | 0.810522 | 1.105647e-50 | -8.615850e-47 |
| Msa0616210 | Msa1410160 | 0.843114 | 1.709515e-58 | -8.615850e-47 |
| Msa0619710 | Msa1410160 | 0.860875 | 1.521816e-63 | -8.615850e-47 |
| Msa0620900 | Msa1410160 | 0.821204 | 4.572118e-53 | -8.615850e-47 |
| Msa0655700 | Msa1410160 | 0.867166 | 1.672435e-65 | -8.615850e-47 |
| Msa0657710 | Msa1410160 | 0.824506 | 7.777503e-54 | -8.615850e-47 |
| Msa0657720 | Msa1410160 | 0.818252 | 2.160156e-52 | -8.615850e-47 |
| Msa0660090 | Msa1410160 | 0.812272 | 4.607620e-51 | -8.615850e-47 |
| Msa0675330 | Msa1410160 | 0.812757 | 3.609592e-51 | -8.615850e-47 |
| Msa0687090 | Msa1410160 | 0.840349 | 9.172773e-58 | -8.615850e-47 |
| Msa0695560 | Msa1410160 | 0.800707 | 1.270024e-48 | -8.615850e-47 |
| Msa0699540 | Msa1410160 | 0.842267 | 2.870204e-58 | -8.615850e-47 |
| Msa0700460 | Msa1410160 | 0.801618 | 8.271975e-49 | -8.615850e-47 |
| Msa0702790 | Msa1410160 | 0.817734 | 2.828521e-52 | -8.615850e-47 |
| Msa0702800 | Msa1410160 | 0.825495 | 4.545050e-54 | -8.615850e-47 |
| Msa0706150 | Msa1410160 | 0.864736 | 9.810041e-65 | -8.615850e-47 |
| Msa0722890 | Msa1410160 | 0.819406 | 1.180913e-52 | -8.615850e-47 |
| Msa0723090 | Msa1410160 | 0.813445 | 2.550847e-51 | -8.615850e-47 |
| Msa0725750 | Msa1410160 | 0.804557 | 2.040319e-49 | -8.615850e-47 |
| Msa0738700 | Msa1410160 | 0.816784 | 4.626472e-52 | -8.615850e-47 |
| Msa0745690 | Msa1410160 | 0.819046 | 1.426192e-52 | -8.615850e-47 |
| Msa0747000 | Msa1410160 | 0.811750 | 5.990098e-51 | -8.615850e-47 |
| Msa0760970 | Msa1410160 | 0.804057 | 2.592763e-49 | -8.615850e-47 |
| Msa0774060 | Msa1410160 | 0.838898 | 2.187867e-57 | -8.615850e-47 |
| Msa0811690 | Msa1410160 | 0.855417 | 6.399822e-62 | -8.615850e-47 |
| Msa0828950 | Msa1410160 | 0.813002 | 3.189873e-51 | -8.615850e-47 |
| Msa0828960 | Msa1410160 | 0.824218 | 9.092325e-54 | -8.615850e-47 |
| Msa0841590 | Msa1410160 | 0.808279 | 3.348628e-50 | -8.615850e-47 |
| Msa0120790 | Msa1410160 | 0.812543 | 4.021697e-51 | -8.615850e-47 |
| Msa0128310 | Msa1410160 | 0.802320 | 5.934205e-49 | -8.615850e-47 |
| Msa0132700 | Msa1410160 | 0.845601 | 3.667723e-59 | -8.615850e-47 |
| Msa0134830 | Msa1410160 | 0.806484 | 8.045276e-50 | -8.615850e-47 |
| Msa0146650 | Msa1410160 | 0.858424 | 8.317370e-63 | -8.615850e-47 |
| Msa0149350 | Msa1410160 | 0.803807 | 2.922284e-49 | -8.615850e-47 |
| Msa0154620 | Msa1410160 | 0.821785 | 3.356197e-53 | -8.615850e-47 |
| Msa0161930 | Msa1410160 | 0.829118 | 6.155656e-55 | -8.615850e-47 |
| Msa0165640 | Msa1410160 | 0.800363 | 1.492937e-48 | -8.615850e-47 |
| Msa0174440 | Msa1410160 | 0.807049 | 6.110396e-50 | -8.615850e-47 |
| Msa0176060 | Msa1410160 | 0.855787 | 4.990330e-62 | -8.615850e-47 |
| Msa0181880 | Msa1410160 | 0.838836 | 2.269149e-57 | -8.615850e-47 |
| Msa0203080 | Msa1410160 | 0.831274 | 1.831780e-55 | -8.615850e-47 |
| Msa0218020 | Msa1410160 | 0.801913 | 7.193358e-49 | -8.615850e-47 |
| Msa0230870 | Msa1410160 | 0.807736 | 4.370169e-50 | -8.615850e-47 |
| Msa1228580 | Msa1410160 | 0.821279 | 4.393162e-53 | -8.615850e-47 |
| Msa1228630 | Msa1410160 | 0.837126 | 6.247720e-57 | -8.615850e-47 |
| Msa1242130 | Msa1410160 | 0.841582 | 4.355039e-58 | -8.615850e-47 |
| Msa1242160 | Msa1410160 | 0.834549 | 2.810432e-56 | -8.615850e-47 |
| Msa1250610 | Msa1410160 | 0.837219 | 5.914165e-57 | -8.615850e-47 |
| Msa1262570 | Msa1410160 | 0.806282 | 8.873803e-50 | -8.615850e-47 |
| Msa1283930 | Msa1410160 | 0.833795 | 4.342080e-56 | -8.615850e-47 |
| Msa1283960 | Msa1410160 | 0.851739 | 7.294366e-61 | -8.615850e-47 |
| Msa1290380 | Msa1410160 | 0.816891 | 4.376117e-52 | -8.615850e-47 |
| Msa1290440 | Msa1410160 | 0.811644 | 6.315913e-51 | -8.615850e-47 |
| Msa1302000 | Msa1410160 | 0.827238 | 1.746617e-54 | -8.615850e-47 |
| Msa1308850 | Msa1410160 | 0.846651 | 1.899429e-59 | -8.615850e-47 |
| Msa1322960 | Msa1410160 | 0.826891 | 2.114777e-54 | -8.615850e-47 |
| Msa1326640 | Msa1410160 | 0.836746 | 7.811774e-57 | -8.615850e-47 |
| Msa1326680 | Msa1410160 | 0.840350 | 9.168392e-58 | -8.615850e-47 |
| Msa1326710 | Msa1410160 | 0.812872 | 3.406829e-51 | -8.615850e-47 |
| Msa1327800 | Msa1410160 | 0.821420 | 4.075720e-53 | -8.615850e-47 |
| Msa1333500 | Msa1410160 | 0.804934 | 1.701649e-49 | -8.615850e-47 |
| Msa1341750 | Msa1410160 | 0.817267 | 3.602925e-52 | -8.615850e-47 |
| Msa1342810 | Msa1410160 | 0.832440 | 9.442384e-56 | -8.615850e-47 |
| Msa0381730 | Msa1410160 | 0.822981 | 1.770335e-53 | -8.615850e-47 |
| Msa0384870 | Msa1410160 | 0.847299 | 1.262508e-59 | -8.615850e-47 |
| Msa0386540 | Msa1410160 | 0.807866 | 4.099219e-50 | -8.615850e-47 |
| Msa0401060 | Msa1410160 | 0.811481 | 6.852996e-51 | -8.615850e-47 |
| Msa0415450 | Msa1410160 | 0.806453 | 8.164538e-50 | -8.615850e-47 |
| Msa0426530 | Msa1410160 | 0.827301 | 1.686983e-54 | -8.615850e-47 |
| Msa0431200 | Msa1410160 | 0.843387 | 1.445466e-58 | -8.615850e-47 |
| Msa0435210 | Msa1410160 | 0.804915 | 1.717193e-49 | -8.615850e-47 |
| Msa0437620 | Msa1410160 | 0.802536 | 5.353992e-49 | -8.615850e-47 |
| Msa0447870 | Msa1410160 | 0.802696 | 4.964430e-49 | -8.615850e-47 |
| Msa0453010 | Msa1410160 | 0.813301 | 2.743186e-51 | -8.615850e-47 |
| Msa0455970 | Msa1410160 | 0.839775 | 1.294905e-57 | -8.615850e-47 |
| Msa0457570 | Msa1410160 | 0.841284 | 5.217124e-58 | -8.615850e-47 |
| Msa0466520 | Msa1410160 | 0.808673 | 2.759095e-50 | -8.615850e-47 |
| Msa0479320 | Msa1410160 | 0.822210 | 2.675402e-53 | -8.615850e-47 |
| Msa0989500 | Msa1410160 | 0.803096 | 4.104203e-49 | -8.615850e-47 |
| Msa1014320 | Msa1410160 | 0.805564 | 1.256145e-49 | -8.615850e-47 |
| Msa1021590 | Msa1410160 | 0.846263 | 2.424203e-59 | -8.615850e-47 |
| Msa1034600 | Msa1410160 | 0.811184 | 7.947395e-51 | -8.615850e-47 |
| Msa1039220 | Msa1410160 | 0.824179 | 9.286415e-54 | -8.615850e-47 |
| Msa1040150 | Msa1410160 | 0.802153 | 6.420683e-49 | -8.615850e-47 |
| Msa1041280 | Msa1410160 | 0.818986 | 1.472065e-52 | -8.615850e-47 |
| Msa1042160 | Msa1410160 | 0.842735 | 2.156781e-58 | -8.615850e-47 |
| Msa1042190 | Msa1410160 | 0.840049 | 1.099006e-57 | -8.615850e-47 |
| Msa1044250 | Msa1410160 | 0.820563 | 6.419908e-53 | -8.615850e-47 |
| Msa1044680 | Msa1410160 | 0.809861 | 1.534576e-50 | -8.615850e-47 |
| Msa1074600 | Msa1410160 | 0.826292 | 2.939686e-54 | -8.615850e-47 |
| Msa1078820 | Msa1410160 | 0.851954 | 6.336136e-61 | -8.615850e-47 |
| Msa1080000 | Msa1410160 | 0.826828 | 2.189273e-54 | -8.615850e-47 |
| Msa1081690 | Msa1410160 | 0.907276 | 6.035464e-81 | -8.615850e-47 |
| Msa1102060 | Msa1410160 | -0.802570 | 5.268824e-49 | -8.615850e-47 |
| Msa1105640 | Msa1410160 | 0.837176 | 6.064435e-57 | -8.615850e-47 |
| Msa0246210 | Msa1410160 | 0.813878 | 2.047781e-51 | -8.615850e-47 |
| Msa0262750 | Msa1410160 | 0.827848 | 1.247091e-54 | -8.615850e-47 |
| Msa0284800 | Msa1410160 | 0.858834 | 6.274564e-63 | -8.615850e-47 |
| Msa0296600 | Msa1410160 | 0.825297 | 5.060625e-54 | -8.615850e-47 |
| Msa0300470 | Msa1410160 | 0.812082 | 5.069316e-51 | -8.615850e-47 |
| Msa0325350 | Msa1410160 | 0.803729 | 3.033652e-49 | -8.615850e-47 |
| Msa0330520 | Msa1410160 | 0.851403 | 9.080892e-61 | -8.615850e-47 |
| Msa0334660 | Msa1410160 | 0.836812 | 7.513119e-57 | -8.615850e-47 |
| Msa0337970 | Msa1410160 | 0.811306 | 7.476874e-51 | -8.615850e-47 |
| Msa1123970 | Msa1410160 | 0.852161 | 5.535234e-61 | -8.615850e-47 |
| Msa1125250 | Msa1410160 | 0.809908 | 1.499260e-50 | -8.615850e-47 |
| Msa1130780 | Msa1410160 | 0.827083 | 1.902678e-54 | -8.615850e-47 |
| Msa1133750 | Msa1410160 | 0.823493 | 1.345034e-53 | -8.615850e-47 |
| Msa1148960 | Msa1410160 | 0.831565 | 1.552979e-55 | -8.615850e-47 |
| Msa1154320 | Msa1410160 | 0.826576 | 2.515033e-54 | -8.615850e-47 |
| Msa1166190 | Msa1410160 | 0.976122 | 3.163242e-141 | -8.615850e-47 |
| Msa1166290 | Msa1410160 | 0.986688 | 1.245806e-167 | -8.615850e-47 |
| Msa1167470 | Msa1410160 | 0.838083 | 3.550456e-57 | -8.615850e-47 |
| Msa1169650 | Msa1410160 | 0.853514 | 2.272456e-61 | -8.615850e-47 |
| Msa1194240 | Msa1410160 | 0.825608 | 4.273414e-54 | -8.615850e-47 |
| Msa1216090 | Msa1410160 | 0.816862 | 4.443057e-52 | -8.615850e-47 |
| Msa1216110 | Msa1410160 | 0.808602 | 2.857482e-50 | -8.615850e-47 |
| Msa1216340 | Msa1410160 | 0.840179 | 1.016165e-57 | -8.615850e-47 |
| Msa1217230 | Msa1410160 | 0.822053 | 2.909495e-53 | -8.615850e-47 |
| Msa1219930 | Msa1410160 | 0.811362 | 7.272620e-51 | -8.615850e-47 |
| Msa0486460 | Msa1410160 | 0.812671 | 3.770283e-51 | -8.615850e-47 |
| Msa0500920 | Msa1410160 | 0.861314 | 1.119171e-63 | -8.615850e-47 |
| Msa0506920 | Msa1410160 | 0.822192 | 2.702190e-53 | -8.615850e-47 |
| Msa0517250 | Msa1410160 | 0.851150 | 1.070644e-60 | -8.615850e-47 |
| Msa0520260 | Msa1410160 | 0.848927 | 4.484817e-60 | -8.615850e-47 |
| Msa0521830 | Msa1410160 | 0.817364 | 3.426748e-52 | -8.615850e-47 |
| Msa0541300 | Msa1410160 | 0.823528 | 1.319728e-53 | -8.615850e-47 |
| Msa0541310 | Msa1410160 | 0.821714 | 3.486057e-53 | -8.615850e-47 |
| Msa0550050 | Msa1410160 | 0.813739 | 2.197542e-51 | -8.615850e-47 |
| Msa0562350 | Msa1410160 | 0.857799 | 1.276201e-62 | -8.615850e-47 |
| Msa0570010 | Msa1410160 | 0.849758 | 2.632680e-60 | -8.615850e-47 |
| Msa0576410 | Msa1410160 | 0.804938 | 1.698367e-49 | -8.615850e-47 |
| Msa0585020 | Msa1410160 | 0.810777 | 9.735180e-51 | -8.615850e-47 |
| Msa0597270 | Msa1410160 | 0.816088 | 6.623113e-52 | -8.615850e-47 |
| Msa0851850 | Msa1410160 | 0.817863 | 2.644629e-52 | -8.615850e-47 |
| Msa0859290 | Msa1410160 | 0.808934 | 2.427033e-50 | -8.615850e-47 |
| Msa0909260 | Msa1410160 | 0.822315 | 2.529475e-53 | -8.615850e-47 |
| Msa0956350 | Msa1410160 | 0.852945 | 3.308163e-61 | -8.615850e-47 |
| Msa0967070 | Msa1410160 | 0.814506 | 1.488267e-51 | -8.615850e-47 |
| Msa0972680 | Msa1410160 | 0.802393 | 5.732140e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410160 | MtrunA17_Chr7g0268781 | 99.046 | 629 | 6 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1284 |
| Msa1410160 | MtrunA17_Chr1g0195911 | 76.899 | 632 | 132 | 6 | 1 | 629 | 1 | 621 | 0.0 | 998 |
| Msa1410160 | MtrunA17_Chr4g0010091 | 47.902 | 572 | 275 | 9 | 30 | 594 | 28 | 583 | 3.19e-179 | 521 |
| Msa1410160 | MtrunA17_Chr7g0245201 | 44.034 | 595 | 289 | 11 | 34 | 615 | 59 | 622 | 9.83e-163 | 480 |
| Msa1410160 | MtrunA17_Chr5g0401451 | 40.156 | 640 | 317 | 14 | 22 | 629 | 25 | 630 | 2.70e-151 | 451 |
| Msa1410160 | MtrunA17_Chr4g0053841 | 38.792 | 629 | 327 | 17 | 25 | 629 | 1 | 595 | 1.18e-136 | 412 |
| Msa1410160 | MtrunA17_Chr2g0303541 | 37.086 | 604 | 333 | 11 | 26 | 601 | 15 | 599 | 5.21e-123 | 378 |
| Msa1410160 | MtrunA17_Chr3g0108331 | 35.057 | 619 | 319 | 15 | 20 | 617 | 7 | 563 | 6.98e-117 | 360 |
| Msa1410160 | MtrunA17_Chr2g0279481 | 31.373 | 663 | 384 | 12 | 13 | 619 | 20 | 667 | 9.30e-108 | 340 |
| Msa1410160 | MtrunA17_Chr8g0374011 | 35.392 | 599 | 312 | 12 | 38 | 575 | 22 | 606 | 3.60e-107 | 337 |
| Msa1410160 | MtrunA17_Chr2g0320691 | 35.034 | 588 | 334 | 12 | 34 | 590 | 21 | 591 | 5.51e-107 | 336 |
| Msa1410160 | MtrunA17_Chr5g0432861 | 33.773 | 607 | 305 | 11 | 20 | 594 | 8 | 549 | 9.00e-107 | 334 |
| Msa1410160 | MtrunA17_Chr4g0050021 | 33.120 | 625 | 347 | 15 | 31 | 602 | 38 | 644 | 3.10e-106 | 335 |
| Msa1410160 | MtrunA17_Chr8g0382231 | 33.884 | 605 | 310 | 13 | 36 | 604 | 52 | 602 | 1.38e-102 | 325 |
| Msa1410160 | MtrunA17_Chr2g0285511 | 34.570 | 593 | 340 | 14 | 20 | 590 | 9 | 575 | 3.43e-97 | 310 |
| Msa1410160 | MtrunA17_Chr1g0181181 | 35.294 | 544 | 301 | 12 | 34 | 556 | 24 | 537 | 8.36e-96 | 305 |
| Msa1410160 | MtrunA17_Chr1g0199631 | 33.755 | 554 | 328 | 12 | 54 | 590 | 8 | 539 | 9.63e-92 | 295 |
| Msa1410160 | MtrunA17_Chr1g0207461 | 34.451 | 537 | 322 | 11 | 34 | 556 | 26 | 546 | 5.51e-86 | 281 |
| Msa1410160 | MtrunA17_Chr5g0401341 | 36.157 | 484 | 265 | 11 | 34 | 498 | 25 | 483 | 1.05e-85 | 280 |
| Msa1410160 | MtrunA17_Chr5g0412591 | 36.673 | 529 | 250 | 14 | 18 | 506 | 12 | 495 | 8.32e-81 | 266 |
| Msa1410160 | MtrunA17_Chr4g0076521 | 33.155 | 561 | 309 | 12 | 27 | 566 | 17 | 532 | 1.02e-80 | 266 |
| Msa1410160 | MtrunA17_Chr1g0150191 | 34.105 | 475 | 290 | 9 | 34 | 497 | 25 | 487 | 2.45e-80 | 266 |
| Msa1410160 | MtrunA17_Chr8g0367891 | 33.276 | 583 | 331 | 16 | 39 | 587 | 29 | 587 | 2.35e-77 | 257 |
| Msa1410160 | MtrunA17_Chr2g0290741 | 31.959 | 485 | 277 | 10 | 27 | 496 | 17 | 463 | 3.38e-66 | 227 |
| Msa1410160 | MtrunA17_Chr1g0191711 | 27.406 | 478 | 286 | 7 | 37 | 503 | 59 | 486 | 9.41e-65 | 222 |
| Msa1410160 | MtrunA17_Chr4g0003891 | 33.099 | 426 | 231 | 11 | 204 | 616 | 33 | 417 | 7.83e-62 | 212 |
| Msa1410160 | MtrunA17_Chr2g0332281 | 33.105 | 438 | 232 | 10 | 213 | 627 | 24 | 423 | 1.17e-58 | 202 |
| Msa1410160 | MtrunA17_Chr4g0023801 | 25.397 | 567 | 368 | 13 | 45 | 593 | 14 | 543 | 3.05e-42 | 160 |
| Msa1410160 | MtrunA17_Chr4g0037661 | 26.337 | 505 | 289 | 14 | 37 | 499 | 4 | 467 | 5.83e-41 | 157 |
| Msa1410160 | MtrunA17_Chr1g0206621 | 50.365 | 137 | 66 | 1 | 43 | 177 | 75 | 211 | 1.22e-40 | 148 |
| Msa1410160 | MtrunA17_Chr1g0163311 | 27.682 | 289 | 148 | 6 | 296 | 575 | 286 | 522 | 8.22e-27 | 114 |
| Msa1410160 | MtrunA17_Chr2g0280541 | 25.170 | 441 | 258 | 10 | 102 | 518 | 1 | 393 | 3.09e-26 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410160 | AT1G03010.1 | 68.837 | 645 | 174 | 9 | 1 | 629 | 1 | 634 | 0.0 | 862 |
| Msa1410160 | AT1G03010.2 | 69.055 | 614 | 163 | 9 | 32 | 629 | 5 | 607 | 0.0 | 816 |
| Msa1410160 | AT1G03010.3 | 69.055 | 614 | 163 | 9 | 32 | 629 | 31 | 633 | 0.0 | 815 |
| Msa1410160 | AT2G47860.1 | 61.231 | 650 | 216 | 12 | 1 | 629 | 1 | 635 | 0.0 | 743 |
| Msa1410160 | AT2G47860.3 | 59.138 | 673 | 216 | 13 | 1 | 629 | 1 | 658 | 0.0 | 730 |
| Msa1410160 | AT2G47860.5 | 61.205 | 531 | 170 | 11 | 121 | 629 | 1 | 517 | 0.0 | 583 |
| Msa1410160 | AT2G47860.2 | 61.205 | 531 | 170 | 11 | 121 | 629 | 1 | 517 | 0.0 | 583 |
| Msa1410160 | AT2G47860.4 | 61.269 | 457 | 155 | 7 | 1 | 448 | 1 | 444 | 0.0 | 531 |
| Msa1410160 | AT2G47860.6 | 58.333 | 480 | 155 | 8 | 1 | 448 | 1 | 467 | 4.25e-180 | 518 |
| Msa1410160 | AT5G48800.1 | 46.540 | 578 | 278 | 8 | 23 | 594 | 28 | 580 | 1.90e-174 | 509 |
| Msa1410160 | AT5G67385.1 | 40.129 | 618 | 320 | 13 | 22 | 617 | 10 | 599 | 5.14e-141 | 424 |
| Msa1410160 | AT3G08570.1 | 43.194 | 551 | 284 | 11 | 34 | 575 | 32 | 562 | 2.85e-140 | 422 |
| Msa1410160 | AT3G08660.1 | 40.842 | 546 | 276 | 11 | 34 | 575 | 32 | 534 | 1.11e-133 | 404 |
| Msa1410160 | AT5G67385.4 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1410160 | AT5G67385.5 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1410160 | AT5G67385.2 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1410160 | AT5G67385.3 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1410160 | AT3G08660.3 | 40.232 | 517 | 262 | 11 | 63 | 575 | 1 | 474 | 3.90e-121 | 370 |
| Msa1410160 | AT1G30440.1 | 35.434 | 587 | 327 | 12 | 26 | 575 | 15 | 586 | 1.41e-111 | 349 |
| Msa1410160 | AT5G03250.1 | 35.593 | 590 | 324 | 13 | 26 | 590 | 15 | 573 | 1.82e-106 | 334 |
| Msa1410160 | AT2G30520.1 | 33.445 | 595 | 326 | 13 | 22 | 594 | 15 | 561 | 1.63e-105 | 332 |
| Msa1410160 | AT5G13600.1 | 36.538 | 572 | 297 | 16 | 39 | 583 | 29 | 561 | 2.87e-101 | 320 |
| Msa1410160 | AT3G49970.1 | 33.956 | 589 | 286 | 16 | 48 | 617 | 6 | 510 | 3.26e-98 | 310 |
| Msa1410160 | AT3G49970.2 | 33.956 | 589 | 286 | 16 | 48 | 617 | 6 | 510 | 3.26e-98 | 310 |
| Msa1410160 | AT2G30520.2 | 33.036 | 560 | 306 | 12 | 56 | 594 | 2 | 513 | 5.85e-95 | 302 |
| Msa1410160 | AT2G30520.3 | 33.036 | 560 | 306 | 12 | 56 | 594 | 2 | 513 | 5.85e-95 | 302 |
| Msa1410160 | AT3G44820.1 | 31.940 | 598 | 333 | 11 | 26 | 575 | 12 | 583 | 5.35e-94 | 303 |
| Msa1410160 | AT5G66560.1 | 32.039 | 618 | 322 | 9 | 38 | 575 | 21 | 620 | 4.31e-92 | 298 |
| Msa1410160 | AT5G66560.3 | 31.908 | 608 | 316 | 9 | 48 | 575 | 2 | 591 | 3.82e-90 | 293 |
| Msa1410160 | AT2G14820.2 | 34.375 | 544 | 320 | 13 | 34 | 558 | 25 | 550 | 9.19e-90 | 291 |
| Msa1410160 | AT2G14820.1 | 34.375 | 544 | 320 | 13 | 34 | 558 | 25 | 550 | 9.19e-90 | 291 |
| Msa1410160 | AT3G50840.1 | 33.333 | 573 | 310 | 10 | 22 | 575 | 2 | 521 | 2.68e-88 | 286 |
| Msa1410160 | AT5G66560.4 | 33.582 | 536 | 302 | 7 | 76 | 575 | 64 | 581 | 3.48e-88 | 287 |
| Msa1410160 | AT3G08660.2 | 37.915 | 422 | 224 | 9 | 34 | 451 | 32 | 419 | 1.82e-87 | 279 |
| Msa1410160 | AT5G10250.2 | 32.184 | 609 | 311 | 16 | 31 | 598 | 44 | 591 | 2.56e-87 | 285 |
| Msa1410160 | AT5G10250.1 | 31.886 | 599 | 311 | 15 | 31 | 598 | 44 | 576 | 3.29e-84 | 276 |
| Msa1410160 | AT5G67440.3 | 36.059 | 477 | 268 | 10 | 34 | 498 | 25 | 476 | 3.74e-84 | 275 |
| Msa1410160 | AT5G67440.1 | 36.059 | 477 | 268 | 10 | 34 | 498 | 25 | 476 | 3.74e-84 | 275 |
| Msa1410160 | AT1G67900.5 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1410160 | AT1G67900.1 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1410160 | AT1G67900.3 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1410160 | AT1G67900.6 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1410160 | AT1G67900.2 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1410160 | AT1G67900.4 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1410160 | AT4G31820.1 | 35.404 | 483 | 265 | 11 | 29 | 498 | 20 | 468 | 4.14e-82 | 270 |
| Msa1410160 | AT3G50840.2 | 33.086 | 538 | 288 | 10 | 57 | 575 | 1 | 485 | 7.47e-80 | 263 |
| Msa1410160 | AT3G50840.3 | 33.086 | 538 | 288 | 10 | 57 | 575 | 1 | 485 | 7.47e-80 | 263 |
| Msa1410160 | AT5G67440.2 | 36.304 | 460 | 256 | 10 | 51 | 498 | 5 | 439 | 9.98e-80 | 262 |
| Msa1410160 | AT4G37590.1 | 32.165 | 485 | 271 | 11 | 34 | 501 | 25 | 468 | 1.83e-77 | 258 |
| Msa1410160 | AT5G03250.2 | 34.350 | 492 | 270 | 11 | 121 | 590 | 1 | 461 | 4.03e-77 | 254 |
| Msa1410160 | AT3G26490.1 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 5.96e-76 | 254 |
| Msa1410160 | AT3G26490.3 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 5.96e-76 | 254 |
| Msa1410160 | AT3G26490.4 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 5.96e-76 | 254 |
| Msa1410160 | AT5G47800.3 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 1.60e-74 | 249 |
| Msa1410160 | AT5G47800.1 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 1.60e-74 | 249 |
| Msa1410160 | AT5G47800.4 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 1.60e-74 | 249 |
| Msa1410160 | AT2G23050.1 | 32.454 | 493 | 268 | 12 | 24 | 505 | 19 | 457 | 2.05e-74 | 246 |
| Msa1410160 | AT5G47800.2 | 32.700 | 474 | 287 | 9 | 33 | 496 | 136 | 587 | 3.24e-73 | 248 |
| Msa1410160 | AT4G31820.2 | 34.076 | 449 | 249 | 11 | 63 | 498 | 1 | 415 | 8.79e-68 | 230 |
| Msa1410160 | AT5G66560.2 | 31.590 | 478 | 242 | 8 | 38 | 448 | 21 | 480 | 9.10e-64 | 218 |
| Msa1410160 | AT3G26490.2 | 33.617 | 470 | 259 | 13 | 18 | 453 | 12 | 462 | 4.78e-58 | 203 |
| Msa1410160 | AT1G52770.1 | 34.430 | 395 | 209 | 7 | 197 | 575 | 17 | 377 | 6.78e-58 | 202 |
| Msa1410160 | AT5G64330.1 | 34.384 | 349 | 202 | 8 | 269 | 596 | 371 | 713 | 7.65e-52 | 191 |
| Msa1410160 | AT5G64330.1 | 34.677 | 248 | 135 | 3 | 34 | 256 | 50 | 295 | 5.86e-41 | 159 |
| Msa1410160 | AT2G23050.2 | 32.564 | 390 | 209 | 10 | 121 | 505 | 1 | 341 | 1.19e-50 | 179 |
| Msa1410160 | AT5G64330.3 | 41.224 | 245 | 129 | 4 | 269 | 503 | 312 | 551 | 4.63e-49 | 181 |
| Msa1410160 | AT5G64330.3 | 34.061 | 229 | 124 | 3 | 53 | 256 | 10 | 236 | 5.89e-35 | 140 |
| Msa1410160 | AT3G15570.1 | 36.913 | 298 | 142 | 5 | 222 | 499 | 38 | 309 | 5.38e-49 | 177 |
| Msa1410160 | AT5G64330.2 | 41.224 | 245 | 129 | 4 | 269 | 503 | 371 | 610 | 6.73e-49 | 181 |
| Msa1410160 | AT5G64330.2 | 34.677 | 248 | 135 | 3 | 34 | 256 | 50 | 295 | 2.49e-41 | 159 |
| Msa1410160 | AT3G19850.1 | 25.202 | 496 | 303 | 9 | 36 | 497 | 3 | 464 | 8.44e-49 | 179 |
| Msa1410160 | AT3G22104.1 | 29.032 | 465 | 265 | 11 | 36 | 483 | 4 | 420 | 3.35e-45 | 168 |
| Msa1410160 | AT1G50280.1 | 25.000 | 488 | 309 | 10 | 32 | 492 | 3 | 460 | 1.66e-44 | 167 |
| Msa1410160 | AT5G48130.1 | 27.096 | 513 | 292 | 14 | 42 | 534 | 45 | 495 | 1.97e-44 | 168 |
| Msa1410160 | AT1G50280.2 | 24.943 | 441 | 282 | 8 | 74 | 492 | 14 | 427 | 1.04e-42 | 161 |
| Msa1410160 | AT5G17580.2 | 27.368 | 475 | 302 | 9 | 38 | 503 | 22 | 462 | 1.74e-39 | 153 |
| Msa1410160 | AT5G17580.1 | 27.789 | 475 | 300 | 10 | 38 | 503 | 7 | 447 | 2.77e-39 | 152 |
| Msa1410160 | AT3G03510.1 | 28.673 | 422 | 226 | 12 | 90 | 501 | 8 | 364 | 1.76e-38 | 148 |
| Msa1410160 | AT3G22104.4 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.43e-34 | 136 |
| Msa1410160 | AT3G22104.2 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.43e-34 | 136 |
| Msa1410160 | AT3G22104.3 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.43e-34 | 136 |
Find 121 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGTTTCCTCTTGTTTCT+AGG | 0.091654 | tig0023619:-25751 | Msa1410160:intron |
| CACCAATCTAAGGGTGTTTC+TGG | 0.142169 | tig0023619:+25290 | None:intergenic |
| GAGAAAATTGTCAAGTAATT+TGG | 0.180360 | tig0023619:+24710 | None:intergenic |
| TTAAATTAGATTATATATTT+AGG | 0.198352 | tig0023619:-27569 | Msa1410160:five_prime_UTR |
| GAATTGAAGCCTAGTGTTTC+AGG | 0.216646 | tig0023619:-27349 | Msa1410160:CDS |
| GTCTCATCAGTGGTAGAAAA+TGG | 0.229342 | tig0023619:-27389 | Msa1410160:exon |
| TTTCTAGGAGTGGAAGATTT+AGG | 0.247375 | tig0023619:-25736 | Msa1410160:CDS |
| AACTTTCCATTGACAGAAAC+TGG | 0.249645 | tig0023619:-27472 | Msa1410160:five_prime_UTR |
| TTCTTTACTACGAACAAATA+AGG | 0.259310 | tig0023619:-24110 | Msa1410160:CDS |
| AGAATTCTCAGAAAAGAATT+TGG | 0.264671 | tig0023619:-25537 | Msa1410160:CDS |
| AGAGTTGATCAGCAAAATTT+TGG | 0.272364 | tig0023619:-25189 | Msa1410160:CDS |
| AACTTCTTGTAGAAGTGATT+TGG | 0.280903 | tig0023619:-24979 | Msa1410160:CDS |
| ATCTTGTTTGGTGGTATTCA+TGG | 0.287931 | tig0023619:-24054 | Msa1410160:CDS |
| TTCTCCATGACACTATCTTT+TGG | 0.314762 | tig0023619:-27519 | Msa1410160:five_prime_UTR |
| AAGATATCAACCTTGTTAAT+AGG | 0.326340 | tig0023619:-25415 | Msa1410160:CDS |
| ATTTACCTTGTGAAGTGAAT+AGG | 0.350440 | tig0023619:+26272 | None:intergenic |
| AGAGTTTCCCCACCAATCTA+AGG | 0.353136 | tig0023619:+25280 | None:intergenic |
| GAGAATGAGGTTGAATGATT+TGG | 0.354022 | tig0023619:-23917 | Msa1410160:CDS |
| AGTATTCGTGGCAGTGGAAC+TGG | 0.358592 | tig0023619:-23781 | Msa1410160:CDS |
| AGCTGTTGACATCTTCCTTA+AGG | 0.360096 | tig0023619:-24586 | Msa1410160:intron |
| GCTTCTCCAGTTTCTGTCAA+TGG | 0.366166 | tig0023619:+27466 | None:intergenic |
| TTAAGAATTGAGCTTTGCTT+TGG | 0.368579 | tig0023619:+24738 | None:intergenic |
| TTCTAAAACATTATCAATGA+TGG | 0.372684 | tig0023619:-25315 | Msa1410160:CDS |
| TGTATAATGTTCGATGTGTT+TGG | 0.373596 | tig0023619:+25476 | None:intergenic |
| TATATAACTCAAAATCTATC+AGG | 0.379497 | tig0023619:+23597 | None:intergenic |
| CAAAGATCAGGGAGTGGTAT+AGG | 0.379986 | tig0023619:-24021 | Msa1410160:CDS |
| GGACACAATCAAATCTTGTT+TGG | 0.395537 | tig0023619:-24066 | Msa1410160:CDS |
| AAACATGAAAGAAATGCTAT+TGG | 0.398126 | tig0023619:+25032 | None:intergenic |
| TTTCTTCGAACGAGTTATAT+CGG | 0.401205 | tig0023619:-25237 | Msa1410160:CDS |
| ATAGGTTCATCCGAACATTA+AGG | 0.402802 | tig0023619:-24244 | Msa1410160:intron |
| GAAAGGCTACCAGTTCAAAT+AGG | 0.406258 | tig0023619:-24141 | Msa1410160:CDS |
| TGCAAAGAGCAACTAACTTC+TGG | 0.410485 | tig0023619:-25365 | Msa1410160:CDS |
| GGTCAATTTCCTCAAAGATC+AGG | 0.415797 | tig0023619:-24033 | Msa1410160:CDS |
| AAAGCAAAGCTCAATTCTTA+AGG | 0.417656 | tig0023619:-24736 | Msa1410160:CDS |
| GAGCTTTGCTTTGGAGATCC+AGG | 0.425100 | tig0023619:+24747 | None:intergenic |
| AGGTTGATATCTTCTGATAA+AGG | 0.430627 | tig0023619:+25425 | None:intergenic |
| AGCACTTGCAGAACTACTTC+CGG | 0.434035 | tig0023619:-24643 | Msa1410160:CDS |
| ATACCACTCCCTGATCTTTG+AGG | 0.435450 | tig0023619:+24024 | None:intergenic |
| TATGCACATAATTCTCTTCA+AGG | 0.435685 | tig0023619:-25161 | Msa1410160:CDS |
| TCACTGGAGACATCAGATAT+TGG | 0.444897 | tig0023619:+26321 | None:intergenic |
| GCTTACTACCAACTCAATCT+AGG | 0.447056 | tig0023619:-25067 | Msa1410160:CDS |
| GTATAATGTTCGATGTGTTT+GGG | 0.449390 | tig0023619:+25477 | None:intergenic |
| ACTTGTACACCTATTTGAAC+TGG | 0.460924 | tig0023619:+24132 | None:intergenic |
| CGCTCCGAGTCCTTAATGTT+CGG | 0.462622 | tig0023619:+24234 | None:intergenic |
| TTCCGTATTAACAGTATTCG+TGG | 0.465111 | tig0023619:-23793 | Msa1410160:CDS |
| AGGCTTCGAAATGCGATGAA+TGG | 0.467453 | tig0023619:-24090 | Msa1410160:CDS |
| TTTCCTCTTGTTTCTAGGAG+TGG | 0.473410 | tig0023619:-25746 | Msa1410160:CDS |
| TCAGGGAGTGGTATAGGAAG+TGG | 0.474984 | tig0023619:-24015 | Msa1410160:CDS |
| AGCCTAGTGTTTCAGGAAGA+AGG | 0.476944 | tig0023619:-27342 | Msa1410160:CDS |
| GGAAACCGGGACCGTGGTTG+TGG | 0.476979 | tig0023619:+23748 | None:intergenic |
| TGCCACGAATACTGTTAATA+CGG | 0.478280 | tig0023619:+23791 | None:intergenic |
| CTTGTAACGCGAGCATGATC+CGG | 0.480182 | tig0023619:+24624 | None:intergenic |
| GATCGGTTTACAACTCGATC+AGG | 0.481839 | tig0023619:-24949 | Msa1410160:CDS |
| GTAAGTCTTCCGACCGTGCC+AGG | 0.485055 | tig0023619:-25674 | Msa1410160:CDS |
| TACTTGGATGGTAAGATCAC+TGG | 0.486316 | tig0023619:+26305 | None:intergenic |
| GGGAGTTTGATCTAGCGAAA+AGG | 0.489191 | tig0023619:-23571 | Msa1410160:three_prime_UTR |
| TCTCATCAGTGGTAGAAAAT+GGG | 0.495228 | tig0023619:-27388 | Msa1410160:exon |
| GGAGTTTGATCTAGCGAAAA+GGG | 0.497186 | tig0023619:-23570 | Msa1410160:three_prime_UTR |
| TCTTCTGCAATTCAATGTCA+AGG | 0.497562 | tig0023619:+25120 | None:intergenic |
| AAGAGCTGAATCATATCTAA+AGG | 0.501938 | tig0023619:-25510 | Msa1410160:CDS |
| AATAGGTTGATGCTCCTACT+TGG | 0.504109 | tig0023619:+26289 | None:intergenic |
| ATATATAATCTAATTTAAGA+TGG | 0.509153 | tig0023619:+27574 | None:intergenic |
| AACCAGAAACACCCTTAGAT+TGG | 0.511015 | tig0023619:-25292 | Msa1410160:CDS |
| CTTCTGCAATTCAATGTCAA+GGG | 0.515528 | tig0023619:+25121 | None:intergenic |
| AAACACATCGAACATTATAC+AGG | 0.516060 | tig0023619:-25474 | Msa1410160:CDS |
| AAAATGGGAGTTGTAACTCT+TGG | 0.524005 | tig0023619:-27373 | Msa1410160:CDS |
| CACAATCAAATCTTGTTTGG+TGG | 0.524281 | tig0023619:-24063 | Msa1410160:CDS |
| ATAGCTGCAAAATTCTGCTA+TGG | 0.525366 | tig0023619:-25632 | Msa1410160:CDS |
| GAGTATGAATTTGACAGTCC+TGG | 0.526590 | tig0023619:-24765 | Msa1410160:CDS |
| GCATGTCTTATGCTTGAACT+TGG | 0.528359 | tig0023619:+27310 | None:intergenic |
| TGAATCATATCTAAAGGAAA+CGG | 0.538877 | tig0023619:-25504 | Msa1410160:CDS |
| GCATAAGACATGCCACTGAA+TGG | 0.541068 | tig0023619:-27300 | Msa1410160:intron |
| ATTAACAGTATTCGTGGCAG+TGG | 0.547672 | tig0023619:-23787 | Msa1410160:CDS |
| CATTGATTAGCCTATTAACA+AGG | 0.548783 | tig0023619:+25405 | None:intergenic |
| TGCATCTACACCACCTGGCA+CGG | 0.550474 | tig0023619:+25661 | None:intergenic |
| TATAATCTAATTTAAGATGG+AGG | 0.552605 | tig0023619:+27577 | None:intergenic |
| TCATCCGAACATTAAGGACT+CGG | 0.556784 | tig0023619:-24238 | Msa1410160:CDS |
| GTCAATTTCCTCAAAGATCA+GGG | 0.559074 | tig0023619:-24032 | Msa1410160:CDS |
| AGAAACACCCTTAGATTGGT+GGG | 0.561564 | tig0023619:-25288 | Msa1410160:CDS |
| GCCATGCCGCACAAAATGAA+AGG | 0.570379 | tig0023619:-24158 | Msa1410160:CDS |
| ACCGATGCATAGTTATCTCT+AGG | 0.575158 | tig0023619:+23982 | None:intergenic |
| GATTTGAAGAATTTGCGTGC+AGG | 0.575709 | tig0023619:+23850 | None:intergenic |
| TTGAATTGCAGAAGAAACAA+AGG | 0.576448 | tig0023619:-25112 | Msa1410160:CDS |
| CTAGTCCACAACCACGGTCC+CGG | 0.580906 | tig0023619:-23753 | Msa1410160:CDS |
| TCCTAGAGATAACTATGCAT+CGG | 0.582662 | tig0023619:-23983 | Msa1410160:CDS |
| AAGTAACAAGAATGAGAATG+AGG | 0.586252 | tig0023619:-23930 | Msa1410160:CDS |
| CAGAAACACCCTTAGATTGG+TGG | 0.586270 | tig0023619:-25289 | Msa1410160:CDS |
| GGTTGATGCTCCTACTTGGA+TGG | 0.586634 | tig0023619:+26293 | None:intergenic |
| AGATGGAGGAAAATAAATGC+AGG | 0.587438 | tig0023619:+27591 | None:intergenic |
| CTTGTAGAAGTGATTTGGAG+AGG | 0.587525 | tig0023619:-24974 | Msa1410160:CDS |
| TGAATTGCAGAAGAAACAAA+GGG | 0.588131 | tig0023619:-25111 | Msa1410160:CDS |
| GCACTCGAAGGTGAATTCGT+TGG | 0.590719 | tig0023619:+24903 | None:intergenic |
| AGTGATTTGGAGAGGCGGAT+CGG | 0.592594 | tig0023619:-24966 | Msa1410160:CDS |
| TCTACACCACCTGGCACGGT+CGG | 0.595705 | tig0023619:+25665 | None:intergenic |
| CTTCCACTCCTAGAAACAAG+AGG | 0.596628 | tig0023619:+25743 | None:intergenic |
| CATGCTCGCGTTACAAGCGA+TGG | 0.602341 | tig0023619:-24618 | Msa1410160:CDS |
| GAGTTTCCCCACCAATCTAA+GGG | 0.605139 | tig0023619:+25281 | None:intergenic |
| ATATCGGTTATGAAATCGAA+GGG | 0.606291 | tig0023619:-25221 | Msa1410160:CDS |
| AGTGATCTTACCATCCAAGT+AGG | 0.606850 | tig0023619:-26303 | Msa1410160:CDS |
| CTTCGAAATGCGATGAATGG+AGG | 0.608119 | tig0023619:-24087 | Msa1410160:CDS |
| GTCCTTCTTCCTGAAACACT+AGG | 0.612878 | tig0023619:+27340 | None:intergenic |
| ATGCACATAATTCTCTTCAA+GGG | 0.619987 | tig0023619:-25160 | Msa1410160:CDS |
| TGAAAAGGAAACCGGGACCG+TGG | 0.620189 | tig0023619:+23742 | None:intergenic |
| TCAAATGCATCTACACCACC+TGG | 0.627222 | tig0023619:+25656 | None:intergenic |
| TATATCGGTTATGAAATCGA+AGG | 0.631995 | tig0023619:-25222 | Msa1410160:CDS |
| ATCAACCTATTCACTTCACA+AGG | 0.635818 | tig0023619:-26277 | Msa1410160:intron |
| TAGCATAGCAATATTCGAGA+GGG | 0.638972 | tig0023619:+25592 | None:intergenic |
| TTTCCTCAAAGATCAGGGAG+TGG | 0.639154 | tig0023619:-24027 | Msa1410160:CDS |
| TGAACCAAAAGATAGTGTCA+TGG | 0.640837 | tig0023619:+27515 | None:intergenic |
| AAAATTATAATACCATTCAG+TGG | 0.645788 | tig0023619:+27288 | None:intergenic |
| GAAACACCCTTAGATTGGTG+GGG | 0.662827 | tig0023619:-25287 | Msa1410160:CDS |
| GTAGAAGTGATTTGGAGAGG+CGG | 0.668323 | tig0023619:-24971 | Msa1410160:CDS |
| ATAGCATAGCAATATTCGAG+AGG | 0.677800 | tig0023619:+25591 | None:intergenic |
| AAAGGTGGTGAATGTGTGTG+TGG | 0.678039 | tig0023619:+27627 | None:intergenic |
| AGTCTTCCGACCGTGCCAGG+TGG | 0.688935 | tig0023619:-25671 | Msa1410160:CDS |
| GAAACACATAGTCTCATCAG+TGG | 0.694722 | tig0023619:-27399 | Msa1410160:five_prime_UTR |
| TTCGTGGCAGTGGAACTGGA+AGG | 0.695731 | tig0023619:-23777 | Msa1410160:CDS |
| ATTCTGCTATGGAATCAATG+TGG | 0.703925 | tig0023619:-25621 | Msa1410160:CDS |
| ACTATAGTCATGAAACTGAG+TGG | 0.715336 | tig0023619:+23707 | None:intergenic |
| ATTGTGTTGTGAGCACTCGA+AGG | 0.726239 | tig0023619:+24891 | None:intergenic |
| GAAGGTCTAGTCCACAACCA+CGG | 0.728361 | tig0023619:-23759 | Msa1410160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAATCTAATTTAAGA+TGG | + | tig0023619:23666-23685 | None:intergenic | 10.0% |
| !!! | ACTTTTTTCTTTTTTTTTGA+AGG | - | tig0023619:23978-23997 | Msa1410160:CDS | 15.0% |
| !! | AATAGTATGATAATAATTGA+TGG | + | tig0023619:24487-24506 | None:intergenic | 15.0% |
| !!! | TCAAAATAATATTTTAGGAA+TGG | + | tig0023619:24671-24690 | None:intergenic | 15.0% |
| !!! | CTGTATCAAAATAATATTTT+AGG | + | tig0023619:24676-24695 | None:intergenic | 15.0% |
| !!! | TTTTTATGTAATGCAATAAA+TGG | + | tig0023619:24757-24776 | None:intergenic | 15.0% |
| !! | ATAATTATAACATATCAGAA+TGG | + | tig0023619:25003-25022 | None:intergenic | 15.0% |
| !! | TTATAATTATACATTCAACA+TGG | - | tig0023619:25013-25032 | Msa1410160:CDS | 15.0% |
| !!! | TTTAAAACCTTTTATACTAA+CGG | + | tig0023619:25162-25181 | None:intergenic | 15.0% |
| !!! | ATATTATTTTCTAACGTTAT+GGG | + | tig0023619:26776-26795 | None:intergenic | 15.0% |
| !!! | AATATTATTTTCTAACGTTA+TGG | + | tig0023619:26777-26796 | None:intergenic | 15.0% |
| !!! | TAGATTTTGAGTTATATAAA+TGG | - | tig0023619:27645-27664 | Msa1410160:five_prime_UTR | 15.0% |
| !!! | AGATTTTGAGTTATATAAAT+GGG | - | tig0023619:27646-27665 | Msa1410160:five_prime_UTR | 15.0% |
| !!! | TATAATCTAATTTAAGATGG+AGG | + | tig0023619:23663-23682 | None:intergenic | 20.0% |
| !! | AAAATTATAATACCATTCAG+TGG | + | tig0023619:23952-23971 | None:intergenic | 20.0% |
| !!! | TCTCTGAAAATTTCAATTTT+TGG | - | tig0023619:24809-24828 | Msa1410160:CDS | 20.0% |
| !! | TGATAACATACTATATAAGA+TGG | + | tig0023619:25329-25348 | None:intergenic | 20.0% |
| !!! | ATCATTGATAATGTTTTAGA+AGG | + | tig0023619:25923-25942 | None:intergenic | 20.0% |
| !!! | TTCTAAAACATTATCAATGA+TGG | - | tig0023619:25922-25941 | Msa1410160:intron | 20.0% |
| !!! | ATGATATAGATTCAATTTTG+AGG | - | tig0023619:26371-26390 | Msa1410160:intron | 20.0% |
| !!! | TTAATAGTGTTTTCAATAGA+AGG | + | tig0023619:26697-26716 | None:intergenic | 20.0% |
| !! | TAATTAATGACTGAAATTGT+TGG | - | tig0023619:26958-26977 | Msa1410160:intron | 20.0% |
| !!! | TGTTGGTTTATTTATCATAT+AGG | - | tig0023619:26975-26994 | Msa1410160:intron | 20.0% |
| !! | TATATAACTCAAAATCTATC+AGG | + | tig0023619:27643-27662 | None:intergenic | 20.0% |
| ! | AATTTCATGAAATCTTGAAG+TGG | + | tig0023619:24101-24120 | None:intergenic | 25.0% |
| ! | ATTAGTTCATCAACCATAAT+AGG | + | tig0023619:24230-24249 | None:intergenic | 25.0% |
| !! | ATCTTAATTTTCCAATCTCA+AGG | + | tig0023619:24356-24375 | None:intergenic | 25.0% |
| !!! | CATACTATTGTTTTAGCTTT+TGG | - | tig0023619:24498-24517 | Msa1410160:intron | 25.0% |
| ! | TTGCATTTCCAAATTCATTT+AGG | + | tig0023619:24524-24543 | None:intergenic | 25.0% |
| ! | ACTCCAATTATTTGCATTAA+TGG | - | tig0023619:24625-24644 | Msa1410160:CDS | 25.0% |
| ! | CTCCAATTATTTGCATTAAT+GGG | - | tig0023619:24626-24645 | Msa1410160:CDS | 25.0% |
| ! | AACCCATTAATGCAAATAAT+TGG | + | tig0023619:24631-24650 | None:intergenic | 25.0% |
| !! | AAACTTAAGTAACCATTTTG+AGG | - | tig0023619:24702-24721 | Msa1410160:CDS | 25.0% |
| ! | AGAATTCTCAGAAAAGAATT+TGG | - | tig0023619:25700-25719 | Msa1410160:CDS | 25.0% |
| ! | TGAATCATATCTAAAGGAAA+CGG | - | tig0023619:25733-25752 | Msa1410160:CDS | 25.0% |
| ! | AAGATATCAACCTTGTTAAT+AGG | - | tig0023619:25822-25841 | Msa1410160:intron | 25.0% |
| ! | AAACATGAAAGAAATGCTAT+TGG | + | tig0023619:26208-26227 | None:intergenic | 25.0% |
| !!! | CTTTTCTACTTTTCTGAATT+TGG | - | tig0023619:26396-26415 | Msa1410160:intron | 25.0% |
| ! | GAGAAAATTGTCAAGTAATT+TGG | + | tig0023619:26530-26549 | None:intergenic | 25.0% |
| !!! | TTGCTTTGATTTGTAAAGAA+AGG | - | tig0023619:26928-26947 | Msa1410160:intron | 25.0% |
| ! | TTCTTTACTACGAACAAATA+AGG | - | tig0023619:27127-27146 | Msa1410160:intron | 25.0% |
| ! | CATGTTTCTGAATAACTTCT+AGG | + | tig0023619:24046-24065 | None:intergenic | 30.0% |
| ATCATGTCATTGTTTGGTAA+AGG | + | tig0023619:24402-24421 | None:intergenic | 30.0% | |
| TTTCATATAGCTAACAGATG+AGG | + | tig0023619:24447-24466 | None:intergenic | 30.0% | |
| CCAAAAAAATTGTCCATTGT+CGG | + | tig0023619:24553-24572 | None:intergenic | 30.0% | |
| ! | GAATGGCTATTTCAATATAG+TGG | + | tig0023619:24654-24673 | None:intergenic | 30.0% |
| ATGGTGCAATAATAAGACAT+TGG | + | tig0023619:24738-24757 | None:intergenic | 30.0% | |
| GACATGAAAATTTCAAAGCA+TGG | + | tig0023619:24855-24874 | None:intergenic | 30.0% | |
| CTACGTGTATATAATGATTC+AGG | - | tig0023619:24874-24893 | Msa1410160:CDS | 30.0% | |
| ATTTACCTTGTGAAGTGAAT+AGG | + | tig0023619:24968-24987 | None:intergenic | 30.0% | |
| TGATACACCGTTAGTATAAA+AGG | - | tig0023619:25152-25171 | Msa1410160:CDS | 30.0% | |
| ATAGCAAAACTACATTTGAC+AGG | + | tig0023619:25364-25383 | None:intergenic | 30.0% | |
| AAGAGCTGAATCATATCTAA+AGG | - | tig0023619:25727-25746 | Msa1410160:CDS | 30.0% | |
| GTATAATGTTCGATGTGTTT+GGG | + | tig0023619:25763-25782 | None:intergenic | 30.0% | |
| TGTATAATGTTCGATGTGTT+TGG | + | tig0023619:25764-25783 | None:intergenic | 30.0% | |
| AAACACATCGAACATTATAC+AGG | - | tig0023619:25763-25782 | Msa1410160:intron | 30.0% | |
| ! | AAGGAACAAGATTTTCACAA+TGG | + | tig0023619:25796-25815 | None:intergenic | 30.0% |
| !! | AGGTTGATATCTTCTGATAA+AGG | + | tig0023619:25815-25834 | None:intergenic | 30.0% |
| !! | CATTGATTAGCCTATTAACA+AGG | + | tig0023619:25835-25854 | None:intergenic | 30.0% |
| TTTCTTCGAACGAGTTATAT+CGG | - | tig0023619:26000-26019 | Msa1410160:intron | 30.0% | |
| ! | TATATCGGTTATGAAATCGA+AGG | - | tig0023619:26015-26034 | Msa1410160:intron | 30.0% |
| ! | ATATCGGTTATGAAATCGAA+GGG | - | tig0023619:26016-26035 | Msa1410160:intron | 30.0% |
| !! | AGAGTTGATCAGCAAAATTT+TGG | - | tig0023619:26048-26067 | Msa1410160:intron | 30.0% |
| TATGCACATAATTCTCTTCA+AGG | - | tig0023619:26076-26095 | Msa1410160:intron | 30.0% | |
| ATGCACATAATTCTCTTCAA+GGG | - | tig0023619:26077-26096 | Msa1410160:intron | 30.0% | |
| TTGAATTGCAGAAGAAACAA+AGG | - | tig0023619:26125-26144 | Msa1410160:intron | 30.0% | |
| TGAATTGCAGAAGAAACAAA+GGG | - | tig0023619:26126-26145 | Msa1410160:intron | 30.0% | |
| AACTTCTTGTAGAAGTGATT+TGG | - | tig0023619:26258-26277 | Msa1410160:intron | 30.0% | |
| TTAAGAATTGAGCTTTGCTT+TGG | + | tig0023619:26502-26521 | None:intergenic | 30.0% | |
| AAAGCAAAGCTCAATTCTTA+AGG | - | tig0023619:26501-26520 | Msa1410160:intron | 30.0% | |
| !!! | GATTTTGAGTTCTAACCTTA+AGG | + | tig0023619:26669-26688 | None:intergenic | 30.0% |
| !! | AATCAATTGTTTTGCTTAGG+CGG | + | tig0023619:27032-27051 | None:intergenic | 30.0% |
| !! | GACAATCAATTGTTTTGCTT+AGG | + | tig0023619:27035-27054 | None:intergenic | 30.0% |
| AAGTAACAAGAATGAGAATG+AGG | - | tig0023619:27307-27326 | Msa1410160:CDS | 30.0% | |
| !! | TTCTCTTTTGAAAAGGAAAC+CGG | + | tig0023619:27506-27525 | None:intergenic | 30.0% |
| !!! | TGTGGTTACTTTTCTTGACA+TGG | + | tig0023619:23595-23614 | None:intergenic | 35.0% |
| AGATGGAGGAAAATAAATGC+AGG | + | tig0023619:23649-23668 | None:intergenic | 35.0% | |
| ! | TTCTCCATGACACTATCTTT+TGG | - | tig0023619:23718-23737 | Msa1410160:CDS | 35.0% |
| TGAACCAAAAGATAGTGTCA+TGG | + | tig0023619:23725-23744 | None:intergenic | 35.0% | |
| AACTTTCCATTGACAGAAAC+TGG | - | tig0023619:23765-23784 | Msa1410160:CDS | 35.0% | |
| TCTCATCAGTGGTAGAAAAT+GGG | - | tig0023619:23849-23868 | Msa1410160:CDS | 35.0% | |
| AAAATGGGAGTTGTAACTCT+TGG | - | tig0023619:23864-23883 | Msa1410160:CDS | 35.0% | |
| !! | AGTCTTATTGAGTTCGAGTT+TGG | - | tig0023619:24147-24166 | Msa1410160:CDS | 35.0% |
| ! | GTCTTATTGAGTTCGAGTTT+GGG | - | tig0023619:24148-24167 | Msa1410160:CDS | 35.0% |
| ! | TCTTATTGAGTTCGAGTTTG+GGG | - | tig0023619:24149-24168 | Msa1410160:CDS | 35.0% |
| CAACCATAATAGGATCTGAA+GGG | + | tig0023619:24220-24239 | None:intergenic | 35.0% | |
| TCAACCATAATAGGATCTGA+AGG | + | tig0023619:24221-24240 | None:intergenic | 35.0% | |
| ! | TGTTTGTGTTGGTATTTCGT+AGG | + | tig0023619:24255-24274 | None:intergenic | 35.0% |
| ACGAAATACCAACACAAACA+CGG | - | tig0023619:24255-24274 | Msa1410160:intron | 35.0% | |
| TTTGGTAAAGGACTACATCA+AGG | + | tig0023619:24390-24409 | None:intergenic | 35.0% | |
| ! | ACATGATGCTCGATTTTGAA+TGG | - | tig0023619:24415-24434 | Msa1410160:intron | 35.0% |
| ! | GCTTTTGGCCTAAATGAATT+TGG | - | tig0023619:24513-24532 | Msa1410160:intron | 35.0% |
| !!! | CCGACAATGGACAATTTTTT+TGG | - | tig0023619:24550-24569 | Msa1410160:intron | 35.0% |
| GGATAAGAATAGCCTCAAAA+TGG | + | tig0023619:24717-24736 | None:intergenic | 35.0% | |
| GAAAATTTCAAAGCATGGCA+AGG | + | tig0023619:24850-24869 | None:intergenic | 35.0% | |
| ATCAACCTATTCACTTCACA+AGG | - | tig0023619:24960-24979 | Msa1410160:CDS | 35.0% | |
| ! | ACATTCAACATGGTTTTCTC+TGG | - | tig0023619:25023-25042 | Msa1410160:CDS | 35.0% |
| ! | TCTGGTTTACATTCCAAGTT+AGG | - | tig0023619:25041-25060 | Msa1410160:CDS | 35.0% |
| CTAGAAACAAGAGGAAACTA+GGG | + | tig0023619:25488-25507 | None:intergenic | 35.0% | |
| ! | TTTCTAGGAGTGGAAGATTT+AGG | - | tig0023619:25501-25520 | Msa1410160:CDS | 35.0% |
| ATAGCTGCAAAATTCTGCTA+TGG | - | tig0023619:25605-25624 | Msa1410160:CDS | 35.0% | |
| ATTCTGCTATGGAATCAATG+TGG | - | tig0023619:25616-25635 | Msa1410160:CDS | 35.0% | |
| TAGCATAGCAATATTCGAGA+GGG | + | tig0023619:25648-25667 | None:intergenic | 35.0% | |
| ATAGCATAGCAATATTCGAG+AGG | + | tig0023619:25649-25668 | None:intergenic | 35.0% | |
| CTTCTGCAATTCAATGTCAA+GGG | + | tig0023619:26119-26138 | None:intergenic | 35.0% | |
| TCTTCTGCAATTCAATGTCA+AGG | + | tig0023619:26120-26139 | None:intergenic | 35.0% | |
| ! | TACTTTTCTGAATTTGGACG+AGG | - | tig0023619:26402-26421 | Msa1410160:intron | 35.0% |
| ! | GCAAGTGCTATGAATTTTGA+TGG | + | tig0023619:26583-26602 | None:intergenic | 35.0% |
| ATAGGTTCATCCGAACATTA+AGG | - | tig0023619:26993-27012 | Msa1410160:intron | 35.0% | |
| ACTTGTACACCTATTTGAAC+TGG | + | tig0023619:27108-27127 | None:intergenic | 35.0% | |
| GGACACAATCAAATCTTGTT+TGG | - | tig0023619:27171-27190 | Msa1410160:intron | 35.0% | |
| ! | CACAATCAAATCTTGTTTGG+TGG | - | tig0023619:27174-27193 | Msa1410160:intron | 35.0% |
| ! | ATCTTGTTTGGTGGTATTCA+TGG | - | tig0023619:27183-27202 | Msa1410160:intron | 35.0% |
| GTCAATTTCCTCAAAGATCA+GGG | - | tig0023619:27205-27224 | Msa1410160:intron | 35.0% | |
| TCCTAGAGATAACTATGCAT+CGG | - | tig0023619:27254-27273 | Msa1410160:intron | 35.0% | |
| GAGAATGAGGTTGAATGATT+TGG | - | tig0023619:27320-27339 | Msa1410160:CDS | 35.0% | |
| TTCCGTATTAACAGTATTCG+TGG | - | tig0023619:27444-27463 | Msa1410160:five_prime_UTR | 35.0% | |
| TGCCACGAATACTGTTAATA+CGG | + | tig0023619:27449-27468 | None:intergenic | 35.0% | |
| !! | TCTCTTTTGAAAAGGAAACC+GGG | + | tig0023619:27505-27524 | None:intergenic | 35.0% |
| ! | GGTTTCCTTTTCAAAAGAGA+AGG | - | tig0023619:27505-27524 | Msa1410160:five_prime_UTR | 35.0% |
| ACTATAGTCATGAAACTGAG+TGG | + | tig0023619:27533-27552 | None:intergenic | 35.0% | |
| GAAACACATAGTCTCATCAG+TGG | - | tig0023619:23838-23857 | Msa1410160:CDS | 40.0% | |
| GTCTCATCAGTGGTAGAAAA+TGG | - | tig0023619:23848-23867 | Msa1410160:CDS | 40.0% | |
| GAATTGAAGCCTAGTGTTTC+AGG | - | tig0023619:23888-23907 | Msa1410160:CDS | 40.0% | |
| GCATGTCTTATGCTTGAACT+TGG | + | tig0023619:23930-23949 | None:intergenic | 40.0% | |
| ! | CTTATTGAGTTCGAGTTTGG+GGG | - | tig0023619:24150-24169 | Msa1410160:CDS | 40.0% |
| ATCAATGTCCGTGTTTGTGT+TGG | + | tig0023619:24266-24285 | None:intergenic | 40.0% | |
| ! | TGTTAGTGTCGTGTCGTTAT+TGG | - | tig0023619:24327-24346 | Msa1410160:intron | 40.0% |
| GTTATTGGACACCTTGAGAT+TGG | - | tig0023619:24342-24361 | Msa1410160:intron | 40.0% | |
| TCGAGCATCATGTCATTGTT+TGG | + | tig0023619:24408-24427 | None:intergenic | 40.0% | |
| !!! | CAGGAAGAGTCTTTTTTTGC+AGG | - | tig0023619:24893-24912 | Msa1410160:CDS | 40.0% |
| TCACTGGAGACATCAGATAT+TGG | + | tig0023619:24919-24938 | None:intergenic | 40.0% | |
| TACTTGGATGGTAAGATCAC+TGG | + | tig0023619:24935-24954 | None:intergenic | 40.0% | |
| AGTGATCTTACCATCCAAGT+AGG | - | tig0023619:24934-24953 | Msa1410160:CDS | 40.0% | |
| !! | AATAGGTTGATGCTCCTACT+TGG | + | tig0023619:24951-24970 | None:intergenic | 40.0% |
| GGTTTACATTCCAAGTTAGG+TGG | - | tig0023619:25044-25063 | Msa1410160:CDS | 40.0% | |
| CTATTCATTGCCACCTAACT+TGG | + | tig0023619:25057-25076 | None:intergenic | 40.0% | |
| GTTAGGTGGCAATGAATAGT+TGG | - | tig0023619:25058-25077 | Msa1410160:CDS | 40.0% | |
| ! | CCAAGAGCTCAAAAGCATAA+TGG | + | tig0023619:25398-25417 | None:intergenic | 40.0% |
| ! | CCATTATGCTTTTGAGCTCT+TGG | - | tig0023619:25395-25414 | Msa1410160:CDS | 40.0% |
| ! | TTATGCTTTTGAGCTCTTGG+TGG | - | tig0023619:25398-25417 | Msa1410160:CDS | 40.0% |
| CCTAGAAACAAGAGGAAACT+AGG | + | tig0023619:25489-25508 | None:intergenic | 40.0% | |
| ! | CCTAGTTTCCTCTTGTTTCT+AGG | - | tig0023619:25486-25505 | Msa1410160:CDS | 40.0% |
| !! | TTTCCTCTTGTTTCTAGGAG+TGG | - | tig0023619:25491-25510 | Msa1410160:CDS | 40.0% |
| TGCAAAGAGCAACTAACTTC+TGG | - | tig0023619:25872-25891 | Msa1410160:intron | 40.0% | |
| AACCAGAAACACCCTTAGAT+TGG | - | tig0023619:25945-25964 | Msa1410160:intron | 40.0% | |
| AGAAACACCCTTAGATTGGT+GGG | - | tig0023619:25949-25968 | Msa1410160:intron | 40.0% | |
| GCTTACTACCAACTCAATCT+AGG | - | tig0023619:26170-26189 | Msa1410160:intron | 40.0% | |
| ! | GAGCTTTTCCTAGATTGAGT+TGG | + | tig0023619:26181-26200 | None:intergenic | 40.0% |
| ! | CTTGTAGAAGTGATTTGGAG+AGG | - | tig0023619:26263-26282 | Msa1410160:intron | 40.0% |
| ! | TTTTCTGAATTTGGACGAGG+TGG | - | tig0023619:26405-26424 | Msa1410160:intron | 40.0% |
| GAGTATGAATTTGACAGTCC+TGG | - | tig0023619:26472-26491 | Msa1410160:intron | 40.0% | |
| AGCTGTTGACATCTTCCTTA+AGG | - | tig0023619:26651-26670 | Msa1410160:intron | 40.0% | |
| TCATCCGAACATTAAGGACT+CGG | - | tig0023619:26999-27018 | Msa1410160:intron | 40.0% | |
| ! | TGGTAGCCTTTCATTTTGTG+CGG | + | tig0023619:27088-27107 | None:intergenic | 40.0% |
| GAAAGGCTACCAGTTCAAAT+AGG | - | tig0023619:27096-27115 | Msa1410160:intron | 40.0% | |
| GGTCAATTTCCTCAAAGATC+AGG | - | tig0023619:27204-27223 | Msa1410160:intron | 40.0% | |
| ACCGATGCATAGTTATCTCT+AGG | + | tig0023619:27258-27277 | None:intergenic | 40.0% | |
| GATTTGAAGAATTTGCGTGC+AGG | + | tig0023619:27390-27409 | None:intergenic | 40.0% | |
| ATTAACAGTATTCGTGGCAG+TGG | - | tig0023619:27450-27469 | Msa1410160:five_prime_UTR | 40.0% | |
| !! | TGGCACCTTCTCTTTTGAAA+AGG | + | tig0023619:27513-27532 | None:intergenic | 40.0% |
| GGAGTTTGATCTAGCGAAAA+GGG | - | tig0023619:27667-27686 | Msa1410160:five_prime_UTR | 40.0% | |
| AAAGGTGGTGAATGTGTGTG+TGG | + | tig0023619:23613-23632 | None:intergenic | 45.0% | |
| ! | GGACACTTTTCAGTGAAAGG+TGG | + | tig0023619:23628-23647 | None:intergenic | 45.0% |
| ! | GCAGGACACTTTTCAGTGAA+AGG | + | tig0023619:23631-23650 | None:intergenic | 45.0% |
| GCTTCTCCAGTTTCTGTCAA+TGG | + | tig0023619:23774-23793 | None:intergenic | 45.0% | |
| AGCCTAGTGTTTCAGGAAGA+AGG | - | tig0023619:23895-23914 | Msa1410160:CDS | 45.0% | |
| GTCCTTCTTCCTGAAACACT+AGG | + | tig0023619:23900-23919 | None:intergenic | 45.0% | |
| GCATAAGACATGCCACTGAA+TGG | - | tig0023619:23937-23956 | Msa1410160:CDS | 45.0% | |
| CCATAATAGGATCTGAAGGG+AGG | + | tig0023619:24217-24236 | None:intergenic | 45.0% | |
| CCTCCCTTCAGATCCTATTA+TGG | - | tig0023619:24214-24233 | Msa1410160:CDS | 45.0% | |
| AATGCAAAGCTCACCGACAA+TGG | - | tig0023619:24537-24556 | Msa1410160:intron | 45.0% | |
| ATTGGAGTTTCACGCTAGCA+TGG | + | tig0023619:24613-24632 | None:intergenic | 45.0% | |
| CTTCCACTCCTAGAAACAAG+AGG | + | tig0023619:25497-25516 | None:intergenic | 45.0% | |
| TCAAATGCATCTACACCACC+TGG | + | tig0023619:25584-25603 | None:intergenic | 45.0% | |
| !! | CACCAATCTAAGGGTGTTTC+TGG | + | tig0023619:25950-25969 | None:intergenic | 45.0% |
| CAGAAACACCCTTAGATTGG+TGG | - | tig0023619:25948-25967 | Msa1410160:intron | 45.0% | |
| GAAACACCCTTAGATTGGTG+GGG | - | tig0023619:25950-25969 | Msa1410160:intron | 45.0% | |
| GAGTTTCCCCACCAATCTAA+GGG | + | tig0023619:25959-25978 | None:intergenic | 45.0% | |
| AGAGTTTCCCCACCAATCTA+AGG | + | tig0023619:25960-25979 | None:intergenic | 45.0% | |
| ! | GTAGAAGTGATTTGGAGAGG+CGG | - | tig0023619:26266-26285 | Msa1410160:intron | 45.0% |
| ! | GATCGGTTTACAACTCGATC+AGG | - | tig0023619:26288-26307 | Msa1410160:CDS | 45.0% |
| ATTGTGTTGTGAGCACTCGA+AGG | + | tig0023619:26349-26368 | None:intergenic | 45.0% | |
| AGCACTTGCAGAACTACTTC+CGG | - | tig0023619:26594-26613 | Msa1410160:intron | 45.0% | |
| AGAGTTGAATCACAGTGTCG+CGG | + | tig0023619:26906-26925 | None:intergenic | 45.0% | |
| AGGCTTCGAAATGCGATGAA+TGG | - | tig0023619:27147-27166 | Msa1410160:intron | 45.0% | |
| CTTCGAAATGCGATGAATGG+AGG | - | tig0023619:27150-27169 | Msa1410160:intron | 45.0% | |
| TTTCCTCAAAGATCAGGGAG+TGG | - | tig0023619:27210-27229 | Msa1410160:intron | 45.0% | |
| ATACCACTCCCTGATCTTTG+AGG | + | tig0023619:27216-27235 | None:intergenic | 45.0% | |
| CAAAGATCAGGGAGTGGTAT+AGG | - | tig0023619:27216-27235 | Msa1410160:intron | 45.0% | |
| GGGAGTTTGATCTAGCGAAA+AGG | - | tig0023619:27666-27685 | Msa1410160:five_prime_UTR | 45.0% | |
| !! | TTAAATTAGATTATATATTT+AGG | - | tig0023619:23668-23687 | Msa1410160:three_prime_UTR | 5.0% |
| ! | GGTTGATGCTCCTACTTGGA+TGG | + | tig0023619:24947-24966 | None:intergenic | 50.0% |
| ! | AGTGATTTGGAGAGGCGGAT+CGG | - | tig0023619:26271-26290 | Msa1410160:intron | 50.0% |
| GCACTCGAAGGTGAATTCGT+TGG | + | tig0023619:26337-26356 | None:intergenic | 50.0% | |
| !! | GAGCTTTGCTTTGGAGATCC+AGG | + | tig0023619:26493-26512 | None:intergenic | 50.0% |
| CTTGTAACGCGAGCATGATC+CGG | + | tig0023619:26616-26635 | None:intergenic | 50.0% | |
| CGCTCCGAGTCCTTAATGTT+CGG | + | tig0023619:27006-27025 | None:intergenic | 50.0% | |
| GCCATGCCGCACAAAATGAA+AGG | - | tig0023619:27079-27098 | Msa1410160:intron | 50.0% | |
| ! | GCCTTTCATTTTGTGCGGCA+TGG | + | tig0023619:27083-27102 | None:intergenic | 50.0% |
| TCAGGGAGTGGTATAGGAAG+TGG | - | tig0023619:27222-27241 | Msa1410160:intron | 50.0% | |
| AGTATTCGTGGCAGTGGAAC+TGG | - | tig0023619:27456-27475 | Msa1410160:five_prime_UTR | 50.0% | |
| GAAGGTCTAGTCCACAACCA+CGG | - | tig0023619:27478-27497 | Msa1410160:five_prime_UTR | 50.0% | |
| TGCATCTACACCACCTGGCA+CGG | + | tig0023619:25579-25598 | None:intergenic | 55.0% | |
| CATGCTCGCGTTACAAGCGA+TGG | - | tig0023619:26619-26638 | Msa1410160:intron | 55.0% | |
| TTCGTGGCAGTGGAACTGGA+AGG | - | tig0023619:27460-27479 | Msa1410160:five_prime_UTR | 55.0% | |
| TGAAAAGGAAACCGGGACCG+TGG | + | tig0023619:27498-27517 | None:intergenic | 55.0% | |
| ACGGTCGGAAGACTTACGCG+CGG | + | tig0023619:25560-25579 | None:intergenic | 60.0% | |
| GTAAGTCTTCCGACCGTGCC+AGG | - | tig0023619:25563-25582 | Msa1410160:CDS | 60.0% | |
| TCTACACCACCTGGCACGGT+CGG | + | tig0023619:25575-25594 | None:intergenic | 60.0% | |
| ATCACAGTGTCGCGGCAGCA+AGG | + | tig0023619:26898-26917 | None:intergenic | 60.0% | |
| CTAGTCCACAACCACGGTCC+CGG | - | tig0023619:27484-27503 | Msa1410160:five_prime_UTR | 60.0% | |
| AGTCTTCCGACCGTGCCAGG+TGG | - | tig0023619:25566-25585 | Msa1410160:CDS | 65.0% | |
| GGAAACCGGGACCGTGGTTG+TGG | + | tig0023619:27492-27511 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023619 | gene | 23559 | 27700 | 23559 | ID=Msa1410160;Name=Msa1410160 |
| tig0023619 | mRNA | 23559 | 27700 | 23559 | ID=Msa1410160-mRNA-1;Parent=Msa1410160;Name=Msa1410160-mRNA-1;_AED=0.17;_eAED=0.17;_QI=308|1|1|1|1|1|4|155|629 |
| tig0023619 | exon | 23559 | 24262 | 23559 | ID=Msa1410160-mRNA-1:exon:26438;Parent=Msa1410160-mRNA-1 |
| tig0023619 | exon | 24587 | 25768 | 24587 | ID=Msa1410160-mRNA-1:exon:26437;Parent=Msa1410160-mRNA-1 |
| tig0023619 | exon | 26278 | 26344 | 26278 | ID=Msa1410160-mRNA-1:exon:26436;Parent=Msa1410160-mRNA-1 |
| tig0023619 | exon | 27301 | 27700 | 27301 | ID=Msa1410160-mRNA-1:exon:26435;Parent=Msa1410160-mRNA-1 |
| tig0023619 | five_prime_UTR | 27393 | 27700 | 27393 | ID=Msa1410160-mRNA-1:five_prime_utr;Parent=Msa1410160-mRNA-1 |
| tig0023619 | CDS | 27301 | 27392 | 27301 | ID=Msa1410160-mRNA-1:cds;Parent=Msa1410160-mRNA-1 |
| tig0023619 | CDS | 26278 | 26344 | 26278 | ID=Msa1410160-mRNA-1:cds;Parent=Msa1410160-mRNA-1 |
| tig0023619 | CDS | 24587 | 25768 | 24587 | ID=Msa1410160-mRNA-1:cds;Parent=Msa1410160-mRNA-1 |
| tig0023619 | CDS | 23714 | 24262 | 23714 | ID=Msa1410160-mRNA-1:cds;Parent=Msa1410160-mRNA-1 |
| tig0023619 | three_prime_UTR | 23559 | 23713 | 23559 | ID=Msa1410160-mRNA-1:three_prime_utr;Parent=Msa1410160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
