Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1046800 | sp|Q8BGK5|S35F1_MOUSE | 40.645 | 310 | 151 | 6 | 1 | 280 | 48 | 354 | 2.51e-64 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1046800 | G7KWQ4 | 86.919 | 344 | 26 | 4 | 1 | 325 | 1 | 344 | 0.0 | 577 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0379640 | Msa1046800 | 0.813982 | 1.942667e-51 | -8.615850e-47 |
| Msa0428930 | Msa1046800 | 0.807172 | 5.755310e-50 | -8.615850e-47 |
| Msa0993290 | Msa1046800 | 0.808576 | 2.893672e-50 | -8.615850e-47 |
| Msa0993600 | Msa1046800 | 0.807779 | 4.278561e-50 | -8.615850e-47 |
| Msa1004010 | Msa1046800 | 0.869300 | 3.433707e-66 | -8.615850e-47 |
| Msa1004190 | Msa1046800 | 0.918205 | 2.077353e-86 | -8.615850e-47 |
| Msa1004360 | Msa1046800 | 0.848675 | 5.269440e-60 | -8.615850e-47 |
| Msa1046800 | Msa1384350 | 0.805106 | 1.566937e-49 | -8.615850e-47 |
| Msa0516440 | Msa1046800 | 0.808058 | 3.731078e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1046800 | MtrunA17_Chr7g0214561 | 86.919 | 344 | 26 | 4 | 1 | 325 | 1 | 344 | 0.0 | 577 |
| Msa1046800 | MtrunA17_Chr7g0266091 | 51.082 | 231 | 107 | 2 | 59 | 283 | 79 | 309 | 1.29e-74 | 232 |
| Msa1046800 | MtrunA17_Chr7g0266101 | 42.308 | 260 | 126 | 4 | 59 | 296 | 79 | 336 | 1.79e-55 | 184 |
| Msa1046800 | MtrunA17_Chr7g0214571 | 88.732 | 71 | 8 | 0 | 78 | 148 | 252 | 322 | 2.13e-36 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1046800 | AT3G59340.2 | 61.856 | 291 | 92 | 3 | 10 | 281 | 40 | 330 | 3.01e-122 | 355 |
| Msa1046800 | AT3G59340.3 | 61.856 | 291 | 92 | 3 | 10 | 281 | 40 | 330 | 3.01e-122 | 355 |
| Msa1046800 | AT3G59340.4 | 61.856 | 291 | 92 | 3 | 10 | 281 | 40 | 330 | 3.01e-122 | 355 |
| Msa1046800 | AT3G59340.1 | 61.856 | 291 | 92 | 3 | 10 | 281 | 13 | 303 | 4.31e-122 | 354 |
| Msa1046800 | AT3G59310.1 | 59.813 | 321 | 110 | 4 | 1 | 302 | 1 | 321 | 2.66e-120 | 349 |
| Msa1046800 | AT3G59310.3 | 59.146 | 328 | 100 | 5 | 1 | 308 | 1 | 314 | 7.94e-120 | 347 |
| Msa1046800 | AT3G59310.2 | 54.830 | 352 | 109 | 4 | 1 | 302 | 1 | 352 | 6.92e-117 | 342 |
| Msa1046800 | AT3G59320.1 | 52.381 | 336 | 115 | 5 | 10 | 313 | 11 | 333 | 1.62e-104 | 310 |
| Msa1046800 | AT3G59320.2 | 55.102 | 245 | 80 | 3 | 86 | 313 | 1 | 232 | 1.62e-80 | 245 |
| Msa1046800 | AT3G59330.1 | 59.009 | 222 | 61 | 3 | 4 | 195 | 5 | 226 | 1.64e-75 | 232 |
| Msa1046800 | AT3G59330.3 | 56.277 | 231 | 62 | 3 | 4 | 195 | 5 | 235 | 1.20e-73 | 228 |
| Msa1046800 | AT3G59330.2 | 55.844 | 231 | 63 | 3 | 4 | 195 | 5 | 235 | 4.86e-73 | 226 |
Find 92 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTATTTGTTGAAATTT+AGG | 0.132074 | 7_2:+7437517 | Msa1046800:three_prime_UTR |
| TTCTTTATGGGAACTGCTTA+TGG | 0.147276 | 7_2:+7434056 | Msa1046800:CDS |
| AATAGATTTCGTATTCTATT+TGG | 0.186925 | 7_2:-7437570 | None:intergenic |
| TGCTTCTTGCATTGCACTCT+TGG | 0.249507 | 7_2:-7437443 | None:intergenic |
| TGGACTAAGAACACATTAAT+TGG | 0.251260 | 7_2:+7433109 | Msa1046800:CDS |
| ACATTAATTGGCCTTGCTTT+AGG | 0.259223 | 7_2:+7433121 | Msa1046800:CDS |
| TATCTTCCAATGTTTGTTAC+AGG | 0.259556 | 7_2:+7436300 | Msa1046800:CDS |
| TAATAATTGATTAATTATTC+TGG | 0.270324 | 7_2:+7433019 | Msa1046800:five_prime_UTR |
| CTGAAAGAGGCTCTTCTTCA+TGG | 0.285624 | 7_2:-7437385 | None:intergenic |
| TGGTACTATTATATACTTCT+TGG | 0.287931 | 7_2:+7434244 | Msa1046800:CDS |
| ATGGCAATGTTAGGTCTCTT+TGG | 0.309096 | 7_2:+7435734 | Msa1046800:CDS |
| TCGTCGTATTGCAGAGGTTT+TGG | 0.323324 | 7_2:+7437200 | Msa1046800:intron |
| ATTCTGGTTTCGTGTGTTGC+TGG | 0.325057 | 7_2:+7433035 | Msa1046800:five_prime_UTR |
| TTTGCTATGAGTTGCTGAAC+TGG | 0.331987 | 7_2:-7437288 | None:intergenic |
| AGCAGTTCCCATAAAGAAAA+TGG | 0.333303 | 7_2:-7434051 | None:intergenic |
| TGATGGATATTAAGAAATAT+TGG | 0.337858 | 7_2:+7433089 | Msa1046800:CDS |
| CATGCGTCATGCTGCTTACA+TGG | 0.358791 | 7_2:+7434739 | Msa1046800:CDS |
| TCTCTTCTCATCACTGCTAC+TGG | 0.360410 | 7_2:+7433154 | Msa1046800:CDS |
| CCGAAACAGAATCAGCATAT+TGG | 0.364256 | 7_2:-7432920 | None:intergenic |
| ATTATGCTTTCCAGGTTGAT+TGG | 0.366989 | 7_2:+7436705 | Msa1046800:intron |
| CCAATATGCTGATTCTGTTT+CGG | 0.368959 | 7_2:+7432920 | Msa1046800:five_prime_UTR |
| AACGCTACAATTTGTAGCTT+CGG | 0.381029 | 7_2:+7437728 | Msa1046800:three_prime_UTR |
| TATAGATTCAAGAAGATAAC+TGG | 0.382296 | 7_2:+7434780 | Msa1046800:CDS |
| AGAAGAGCCTCTTTCAGAAA+TGG | 0.384499 | 7_2:+7437391 | Msa1046800:three_prime_UTR |
| ATTCGTACCTTAAGCAGAAC+AGG | 0.384721 | 7_2:-7436376 | None:intergenic |
| TCATCCTGTCTGATTGCAAC+AGG | 0.386095 | 7_2:-7437260 | None:intergenic |
| TCTTTATGGGAACTGCTTAT+GGG | 0.394257 | 7_2:+7434057 | Msa1046800:CDS |
| GGTGGAAGTAATCCTCGTTT+AGG | 0.403367 | 7_2:+7435057 | Msa1046800:intron |
| GGTGTAATTGTTTGCATAGC+CGG | 0.409701 | 7_2:+7434801 | Msa1046800:CDS |
| GCGTTTGGTGCTGTTGTCAT+TGG | 0.411820 | 7_2:+7436740 | Msa1046800:CDS |
| CATAGCAAAGGAAATGTGTC+TGG | 0.413561 | 7_2:+7437302 | Msa1046800:CDS |
| TCTAGTCCCTGTTCTGCTTA+AGG | 0.413618 | 7_2:+7436369 | Msa1046800:CDS |
| GAATAGCCCATTTCTGAAAG+AGG | 0.414593 | 7_2:-7437398 | None:intergenic |
| GAAGAGCTCATGGCAATGTT+AGG | 0.420524 | 7_2:+7435725 | Msa1046800:CDS |
| AACAAGATAACTGCTATGAT+TGG | 0.422559 | 7_2:-7437805 | None:intergenic |
| TTCTTGCATTGCACTCTTGG+AGG | 0.434118 | 7_2:-7437440 | None:intergenic |
| TGTAGCAAACCCTTCAATCA+TGG | 0.438684 | 7_2:+7434027 | Msa1046800:intron |
| CTATTATATACTTCTTGGAT+TGG | 0.443539 | 7_2:+7434249 | Msa1046800:CDS |
| TGTTTCTAATACAGGCGAAA+TGG | 0.446396 | 7_2:+7434224 | Msa1046800:intron |
| TAATGAAATAATAATTAATG+AGG | 0.456106 | 7_2:-7432998 | None:intergenic |
| GAAGAGCCTCTTTCAGAAAT+GGG | 0.456696 | 7_2:+7437392 | Msa1046800:three_prime_UTR |
| CTTTCAAGGATACATTTGAA+TGG | 0.460817 | 7_2:-7435771 | None:intergenic |
| GGTTCTTCAACAGCATTAGC+AGG | 0.462571 | 7_2:-7437239 | None:intergenic |
| TGGATGTACTACTTGGCGTT+TGG | 0.468134 | 7_2:+7436725 | Msa1046800:CDS |
| AATCAGCATATTGGATTGGA+TGG | 0.487352 | 7_2:-7432911 | None:intergenic |
| AGAAAATGGCCCATGATTGA+AGG | 0.489823 | 7_2:-7434037 | None:intergenic |
| AGATTTCGTATTCTATTTGG+TGG | 0.493197 | 7_2:-7437567 | None:intergenic |
| TTCTGGTTTCGTGTGTTGCT+GGG | 0.496245 | 7_2:+7433036 | Msa1046800:five_prime_UTR |
| TTATTTGTTGAAATTTAGGT+TGG | 0.496495 | 7_2:+7437521 | Msa1046800:three_prime_UTR |
| GGAGACGTTCTTGTTATCGC+TGG | 0.498105 | 7_2:+7435078 | Msa1046800:CDS |
| AAGAACAACAAGGATGATGA+TGG | 0.517507 | 7_2:+7433072 | Msa1046800:exon |
| GAAATGCCTGTAACAAACAT+TGG | 0.525015 | 7_2:-7436306 | None:intergenic |
| GAAAATGGCCCATGATTGAA+GGG | 0.526187 | 7_2:-7434036 | None:intergenic |
| CACCTTATGAACAGTTGTGA+AGG | 0.528488 | 7_2:+7434662 | Msa1046800:intron |
| GGTTGATTGGATGTACTACT+TGG | 0.533288 | 7_2:+7436718 | Msa1046800:intron |
| GATTTCGTATTCTATTTGGT+GGG | 0.534105 | 7_2:-7437566 | None:intergenic |
| ACAGAATCAGCATATTGGAT+TGG | 0.535438 | 7_2:-7432915 | None:intergenic |
| GCAATGTTAGGTCTCTTTGG+TGG | 0.537905 | 7_2:+7435737 | Msa1046800:CDS |
| TATACTTTCTTAAGCTACCC+AGG | 0.539167 | 7_2:-7437336 | None:intergenic |
| TGTTGCAATCAGACAGGATG+AGG | 0.549578 | 7_2:+7437262 | Msa1046800:CDS |
| GACATTACTGAATGCATACA+AGG | 0.557186 | 7_2:-7435106 | None:intergenic |
| GTAGCAAACCCTTCAATCAT+GGG | 0.558438 | 7_2:+7434028 | Msa1046800:intron |
| GTGTGATGCTACTTGACTGC+TGG | 0.567229 | 7_2:+7434709 | Msa1046800:CDS |
| CATCTTCGCTTACCATGAGA+AGG | 0.573397 | 7_2:+7436586 | Msa1046800:CDS |
| CTCTTCTGACCTCAGACATG+TGG | 0.578272 | 7_2:+7436549 | Msa1046800:CDS |
| AGCTTAAGAAAGTATAGACC+TGG | 0.578972 | 7_2:+7437343 | Msa1046800:exon |
| TGCTGATAGAGAAGAGCTCA+TGG | 0.583244 | 7_2:+7435715 | Msa1046800:CDS |
| AGAACCTGTTGCAATCAGAC+AGG | 0.585681 | 7_2:+7437256 | Msa1046800:CDS |
| AAGCAGCATGACGCATGGAA+TGG | 0.591362 | 7_2:-7434733 | None:intergenic |
| ACTTCTTGGATTGGTTGATG+TGG | 0.592336 | 7_2:+7434258 | Msa1046800:CDS |
| CATGTAAGCAGCATGACGCA+TGG | 0.595629 | 7_2:-7434738 | None:intergenic |
| AAAGAAATTGACCTAAAGCA+AGG | 0.605050 | 7_2:-7433132 | None:intergenic |
| AAATACAACTAGGACAAGGC+CGG | 0.612279 | 7_2:-7434820 | None:intergenic |
| ATAGCAAAGGAAATGTGTCT+GGG | 0.615099 | 7_2:+7437303 | Msa1046800:CDS |
| AGTTCAGCAACTCATAGCAA+AGG | 0.620241 | 7_2:+7437290 | Msa1046800:CDS |
| GTTGTATGTGTTTGTATGTG+CGG | 0.620544 | 7_2:+7437676 | Msa1046800:three_prime_UTR |
| ATTGGGATGCGATAAATCAA+AGG | 0.622552 | 7_2:+7437771 | Msa1046800:three_prime_UTR |
| GTTCATGCTGGTGACCGTGC+AGG | 0.625656 | 7_2:+7434849 | Msa1046800:CDS |
| GTTCTTCAACAGCATTAGCA+GGG | 0.626050 | 7_2:-7437238 | None:intergenic |
| TAGCATCACACTTGTAAGTG+AGG | 0.628131 | 7_2:-7434697 | None:intergenic |
| TATTTCGTCTCACAGCTCAA+CGG | 0.632141 | 7_2:+7436506 | Msa1046800:intron |
| TATAAAGCCACCTACCTGCA+CGG | 0.642251 | 7_2:-7434863 | None:intergenic |
| GTTACTGACAGACCTTCTCA+TGG | 0.642594 | 7_2:-7436598 | None:intergenic |
| GAACATCCGAAAATACAACT+AGG | 0.652850 | 7_2:-7434830 | None:intergenic |
| TAAGACAGACCACATGTCTG+AGG | 0.664215 | 7_2:-7436558 | None:intergenic |
| CCGAAAATACAACTAGGACA+AGG | 0.664542 | 7_2:-7434824 | None:intergenic |
| TTCGTACCTTAAGCAGAACA+GGG | 0.675043 | 7_2:-7436375 | None:intergenic |
| TAGACCTGGAGATCCATGCA+AGG | 0.683078 | 7_2:+7437357 | Msa1046800:three_prime_UTR |
| TGCATTCAGTAATGTCAGTG+AGG | 0.688986 | 7_2:+7435113 | Msa1046800:CDS |
| ATGTGTTTGTATGTGCGGTG+AGG | 0.700159 | 7_2:+7437681 | Msa1046800:three_prime_UTR |
| ACAAGAACGTCTCCTAAACG+AGG | 0.721995 | 7_2:-7435069 | None:intergenic |
| TGAGAACAAGAAGAACAACA+AGG | 0.747553 | 7_2:+7433062 | Msa1046800:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGAAATAATAATTAATG+AGG | - | chr7_2:7433001-7433020 | None:intergenic | 10.0% |
| !! | TAATAATTGATTAATTATTC+TGG | + | chr7_2:7433019-7433038 | Msa1046800:five_prime_UTR | 10.0% |
| !!! | TATTATTTTTTGTCGTATTA+TGG | + | chr7_2:7433374-7433393 | Msa1046800:intron | 15.0% |
| !!! | TAACTTTTTTAGAATAGAAA+TGG | - | chr7_2:7433561-7433580 | None:intergenic | 15.0% |
| !! | AAAAAACCTAATAAGTTTAT+AGG | + | chr7_2:7434469-7434488 | Msa1046800:intron | 15.0% |
| !! | AAAAATTGTTATGTTGAATT+TGG | + | chr7_2:7435561-7435580 | Msa1046800:intron | 15.0% |
| !! | AAAATTGTTATGTTGAATTT+GGG | + | chr7_2:7435562-7435581 | Msa1046800:intron | 15.0% |
| !! | TATGAATATAGAGTAATAAA+AGG | - | chr7_2:7436204-7436223 | None:intergenic | 15.0% |
| !!! | TATAAATATTGAGCTTTTTA+TGG | + | chr7_2:7436455-7436474 | Msa1046800:intron | 15.0% |
| !!! | ATAAATATTGAGCTTTTTAT+GGG | + | chr7_2:7436456-7436475 | Msa1046800:intron | 15.0% |
| !! | CATCATAAGAAAAAAATATT+TGG | - | chr7_2:7437178-7437197 | None:intergenic | 15.0% |
| !!! | CTTATTATTTGTTGAAATTT+AGG | + | chr7_2:7437517-7437536 | Msa1046800:three_prime_UTR | 15.0% |
| !!! | TGATGGATATTAAGAAATAT+TGG | + | chr7_2:7433089-7433108 | Msa1046800:CDS | 20.0% |
| !! | CAAAAACACATAATTTAGAA+AGG | - | chr7_2:7433427-7433446 | None:intergenic | 20.0% |
| !!! | GGTTTTATTATTTTCTAAAG+AGG | + | chr7_2:7433960-7433979 | Msa1046800:intron | 20.0% |
| !! | TATACACCTATAAACTTATT+AGG | - | chr7_2:7434478-7434497 | None:intergenic | 20.0% |
| !! | AATAAGTTTATAGGTGTATA+TGG | + | chr7_2:7434478-7434497 | Msa1046800:intron | 20.0% |
| !!! | ATTCTCCATATATTTTTTCT+TGG | + | chr7_2:7434934-7434953 | Msa1046800:intron | 20.0% |
| !! | TACTGATCATAATAAAAGAT+AGG | - | chr7_2:7434986-7435005 | None:intergenic | 20.0% |
| !! | TGATGATATTATCATATCAT+AGG | + | chr7_2:7435036-7435055 | Msa1046800:intron | 20.0% |
| !!! | ACTAGTTATTAGTATTGAAA+AGG | + | chr7_2:7435224-7435243 | Msa1046800:intron | 20.0% |
| !! | AAATTGTTATGTTGAATTTG+GGG | + | chr7_2:7435563-7435582 | Msa1046800:intron | 20.0% |
| !! | AAACAAAATAACAATAACAC+GGG | - | chr7_2:7435669-7435688 | None:intergenic | 20.0% |
| !! | GAAACAAAATAACAATAACA+CGG | - | chr7_2:7435670-7435689 | None:intergenic | 20.0% |
| !! | CAATATATAATCAACTTTCA+AGG | - | chr7_2:7435788-7435807 | None:intergenic | 20.0% |
| !!! | TGAAAGTTGATTATATATTG+AGG | + | chr7_2:7435788-7435807 | Msa1046800:intron | 20.0% |
| !! | TAAACATCAACAAATTATAG+CGG | + | chr7_2:7436106-7436125 | Msa1046800:intron | 20.0% |
| !! | AGTTCATATATCAAACTAAT+TGG | - | chr7_2:7436257-7436276 | None:intergenic | 20.0% |
| !! | ATGTTATTACAAAACTGATT+TGG | + | chr7_2:7436880-7436899 | Msa1046800:intron | 20.0% |
| !! | TTATGTTTATTATCAAAGTG+TGG | + | chr7_2:7436999-7437018 | Msa1046800:intron | 20.0% |
| !!! | TTATTTGTTGAAATTTAGGT+TGG | + | chr7_2:7437521-7437540 | Msa1046800:three_prime_UTR | 20.0% |
| !! | AATAGATTTCGTATTCTATT+TGG | - | chr7_2:7437573-7437592 | None:intergenic | 20.0% |
| ! | TCTTCTGATTTAGCTAAAAA+AGG | + | chr7_2:7433184-7433203 | Msa1046800:CDS | 25.0% |
| !!! | TCACTTCCTTTTAATTACTT+TGG | + | chr7_2:7433240-7433259 | Msa1046800:intron | 25.0% |
| ! | TCATGACCAAAGTAATTAAA+AGG | - | chr7_2:7433249-7433268 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTCGTATTATGGT+AGG | + | chr7_2:7433378-7433397 | Msa1046800:intron | 25.0% |
| ! | TTATTCTTATGTACTCTGTT+TGG | + | chr7_2:7433503-7433522 | Msa1046800:intron | 25.0% |
| ! | TATCTGCAATGAAAATTGTT+TGG | + | chr7_2:7434105-7434124 | Msa1046800:intron | 25.0% |
| !!! | CTTCATATTGTTTCTAATAC+AGG | + | chr7_2:7434216-7434235 | Msa1046800:intron | 25.0% |
| ! | TGGTACTATTATATACTTCT+TGG | + | chr7_2:7434244-7434263 | Msa1046800:CDS | 25.0% |
| ! | CTATTATATACTTCTTGGAT+TGG | + | chr7_2:7434249-7434268 | Msa1046800:CDS | 25.0% |
| !! | TCTTTAGGTTCTAATTTAAG+AGG | + | chr7_2:7434444-7434463 | Msa1046800:intron | 25.0% |
| ! | TATAGATTCAAGAAGATAAC+TGG | + | chr7_2:7434780-7434799 | Msa1046800:CDS | 25.0% |
| ! | GACTTCCAAGAAAAAATATA+TGG | - | chr7_2:7434942-7434961 | None:intergenic | 25.0% |
| ! | TGATATTATCATATCATAGG+TGG | + | chr7_2:7435039-7435058 | Msa1046800:intron | 25.0% |
| !! | GTTATTAGTATTGAAAAGGT+TGG | + | chr7_2:7435228-7435247 | Msa1046800:intron | 25.0% |
| !! | TCTTAATGTTCGTTTTCATT+AGG | + | chr7_2:7435281-7435300 | Msa1046800:intron | 25.0% |
| ! | TCTGAATATAATAATGAGCA+TGG | - | chr7_2:7435388-7435407 | None:intergenic | 25.0% |
| ! | CAAACTGAATTTCATTCAAA+CGG | + | chr7_2:7435537-7435556 | Msa1046800:intron | 25.0% |
| ! | GATTATATATTGAGGACTAT+TGG | + | chr7_2:7435796-7435815 | Msa1046800:intron | 25.0% |
| !!! | TTTTCATTTTGAAGCCTTAA+TGG | + | chr7_2:7435837-7435856 | Msa1046800:intron | 25.0% |
| ! | AAGGTACGAATTTAAACATA+AGG | + | chr7_2:7436388-7436407 | Msa1046800:intron | 25.0% |
| !!! | CATAAGGATTCTAAAGATTT+TGG | + | chr7_2:7436404-7436423 | Msa1046800:intron | 25.0% |
| ! | AGATAGATAAAAAGGAAGTA+AGG | - | chr7_2:7436623-7436642 | None:intergenic | 25.0% |
| ! | TTTCTGTGAGATAGATAAAA+AGG | - | chr7_2:7436631-7436650 | None:intergenic | 25.0% |
| ! | ATTTGTGACTCATAATTAGT+AGG | - | chr7_2:7436658-7436677 | None:intergenic | 25.0% |
| !!! | TTCTGTTGATTCTTTTTTTC+TGG | + | chr7_2:7436809-7436828 | Msa1046800:intron | 25.0% |
| !! | CTAGTTCTTCAATGTTATTA+TGG | + | chr7_2:7436869-7436888 | Msa1046800:intron | 25.0% |
| ! | ACATGCATGTAACTTATTTA+GGG | + | chr7_2:7437080-7437099 | Msa1046800:intron | 25.0% |
| TGGACTAAGAACACATTAAT+TGG | + | chr7_2:7433109-7433128 | Msa1046800:CDS | 30.0% | |
| AAAGAAATTGACCTAAAGCA+AGG | - | chr7_2:7433135-7433154 | None:intergenic | 30.0% | |
| !! | GTGTTTTTGATGATTGTCTA+TGG | + | chr7_2:7433438-7433457 | Msa1046800:intron | 30.0% |
| ! | TGCTAGCATAAACATTTTTG+CGG | - | chr7_2:7433691-7433710 | None:intergenic | 30.0% |
| CTCAAATAAGTCAATCCAAA+CGG | + | chr7_2:7433720-7433739 | Msa1046800:intron | 30.0% | |
| TGGCATAAGCACTTAATTAA+GGG | - | chr7_2:7433747-7433766 | None:intergenic | 30.0% | |
| ATGGCATAAGCACTTAATTA+AGG | - | chr7_2:7433748-7433767 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTTATAAGCTATCC+AGG | + | chr7_2:7433826-7433845 | Msa1046800:intron | 30.0% |
| TAAAACCCCATTCAGAATTA+GGG | - | chr7_2:7433947-7433966 | None:intergenic | 30.0% | |
| ATAAAACCCCATTCAGAATT+AGG | - | chr7_2:7433948-7433967 | None:intergenic | 30.0% | |
| AAAAACTAGCATCTCAACAT+TGG | - | chr7_2:7433986-7434005 | None:intergenic | 30.0% | |
| ! | GATCGATATTTAGAAAGCAT+TGG | + | chr7_2:7434326-7434345 | Msa1046800:intron | 30.0% |
| TTGGATTATCTTCCAGATTA+TGG | + | chr7_2:7434400-7434419 | Msa1046800:intron | 30.0% | |
| TGGATTATCTTCCAGATTAT+GGG | + | chr7_2:7434401-7434420 | Msa1046800:intron | 30.0% | |
| CTCAGTTGAAATAAGTCTTT+AGG | + | chr7_2:7434429-7434448 | Msa1046800:intron | 30.0% | |
| AAGTCAACATAAAGCTAGTT+TGG | - | chr7_2:7434594-7434613 | None:intergenic | 30.0% | |
| CATCAGACAAACATGATAAA+TGG | - | chr7_2:7435021-7435040 | None:intergenic | 30.0% | |
| ! | TTATGCATTTTGCAACACTT+TGG | + | chr7_2:7435158-7435177 | Msa1046800:intron | 30.0% |
| ! | TAATGTTCGTTTTCATTAGG+CGG | + | chr7_2:7435284-7435303 | Msa1046800:intron | 30.0% |
| ! | AGCCATCTTTTTATGTATCA+GGG | + | chr7_2:7435350-7435369 | Msa1046800:intron | 30.0% |
| TTCAGTTTGACAAGAAACTA+TGG | - | chr7_2:7435526-7435545 | None:intergenic | 30.0% | |
| !!! | TGTTATTTTGTTTCCATTGC+AGG | + | chr7_2:7435676-7435695 | Msa1046800:intron | 30.0% |
| TTTACTAAAAACTCCTGCAA+TGG | - | chr7_2:7435692-7435711 | None:intergenic | 30.0% | |
| CTTTCAAGGATACATTTGAA+TGG | - | chr7_2:7435774-7435793 | None:intergenic | 30.0% | |
| ATGAGCTTAAATCTATTCAC+TGG | + | chr7_2:7435887-7435906 | Msa1046800:intron | 30.0% | |
| ! | TTATAGCGGAAATAGTTTAG+AGG | + | chr7_2:7436120-7436139 | Msa1046800:intron | 30.0% |
| GGTCTCACATAAAAAACTTT+AGG | - | chr7_2:7436183-7436202 | None:intergenic | 30.0% | |
| ! | TATCTTCCAATGTTTGTTAC+AGG | + | chr7_2:7436300-7436319 | Msa1046800:CDS | 30.0% |
| !!! | TTACAGGCATTTCCTTTTTT+TGG | + | chr7_2:7436316-7436335 | Msa1046800:CDS | 30.0% |
| !!! | TCCTTTTTTTGGATTTTCTG+TGG | + | chr7_2:7436327-7436346 | Msa1046800:CDS | 30.0% |
| TAGAACTAATTATGCTTTCC+AGG | + | chr7_2:7436697-7436716 | Msa1046800:intron | 30.0% | |
| GACATGCATGTAACTTATTT+AGG | + | chr7_2:7437079-7437098 | Msa1046800:intron | 30.0% | |
| GATTTCGTATTCTATTTGGT+GGG | - | chr7_2:7437569-7437588 | None:intergenic | 30.0% | |
| AGATTTCGTATTCTATTTGG+TGG | - | chr7_2:7437570-7437589 | None:intergenic | 30.0% | |
| AACAAGATAACTGCTATGAT+TGG | - | chr7_2:7437808-7437827 | None:intergenic | 30.0% | |
| ! | AATCAGCATATTGGATTGGA+TGG | - | chr7_2:7432914-7432933 | None:intergenic | 35.0% |
| ACAGAATCAGCATATTGGAT+TGG | - | chr7_2:7432918-7432937 | None:intergenic | 35.0% | |
| !! | CCAATATGCTGATTCTGTTT+CGG | + | chr7_2:7432920-7432939 | Msa1046800:five_prime_UTR | 35.0% |
| ! | TAATGAGGTTTTGCTGAGAA+GGG | - | chr7_2:7432986-7433005 | None:intergenic | 35.0% |
| ! | TTAATGAGGTTTTGCTGAGA+AGG | - | chr7_2:7432987-7433006 | None:intergenic | 35.0% |
| TGAGAACAAGAAGAACAACA+AGG | + | chr7_2:7433062-7433081 | Msa1046800:five_prime_UTR | 35.0% | |
| AAGAACAACAAGGATGATGA+TGG | + | chr7_2:7433072-7433091 | Msa1046800:exon | 35.0% | |
| !! | ACATTAATTGGCCTTGCTTT+AGG | + | chr7_2:7433121-7433140 | Msa1046800:CDS | 35.0% |
| TTTAGAAAGGACTGTGATGT+TGG | - | chr7_2:7433414-7433433 | None:intergenic | 35.0% | |
| ! | TTTTATAAGCTATCCAGGAG+AGG | + | chr7_2:7433831-7433850 | Msa1046800:intron | 35.0% |
| !! | CTTATTTTCATTACCTCTCC+TGG | - | chr7_2:7433847-7433866 | None:intergenic | 35.0% |
| ! | AGACTAATTGGCAAAGCTTT+TGG | - | chr7_2:7433876-7433895 | None:intergenic | 35.0% |
| CATAAGCAGTTGAGACTAAT+TGG | - | chr7_2:7433888-7433907 | None:intergenic | 35.0% | |
| ATTCAGAATTAGGGTCTGTT+AGG | - | chr7_2:7433938-7433957 | None:intergenic | 35.0% | |
| TAACAGACCCTAATTCTGAA+TGG | + | chr7_2:7433937-7433956 | Msa1046800:intron | 35.0% | |
| AACAGACCCTAATTCTGAAT+GGG | + | chr7_2:7433938-7433957 | Msa1046800:intron | 35.0% | |
| !! | ATCATGGGCCATTTTCTTTA+TGG | + | chr7_2:7434043-7434062 | Msa1046800:CDS | 35.0% |
| !! | TCATGGGCCATTTTCTTTAT+GGG | + | chr7_2:7434044-7434063 | Msa1046800:CDS | 35.0% |
| AGCAGTTCCCATAAAGAAAA+TGG | - | chr7_2:7434054-7434073 | None:intergenic | 35.0% | |
| TTCTTTATGGGAACTGCTTA+TGG | + | chr7_2:7434056-7434075 | Msa1046800:CDS | 35.0% | |
| TCTTTATGGGAACTGCTTAT+GGG | + | chr7_2:7434057-7434076 | Msa1046800:CDS | 35.0% | |
| ! | CTTATGGGAAGTATAAGAGA+TGG | + | chr7_2:7434072-7434091 | Msa1046800:intron | 35.0% |
| ACAGGGCAGAAATAACATAA+CGG | - | chr7_2:7434155-7434174 | None:intergenic | 35.0% | |
| TTTAAACAGTTGACAGTGAG+AGG | - | chr7_2:7434182-7434201 | None:intergenic | 35.0% | |
| ! | TGTTTCTAATACAGGCGAAA+TGG | + | chr7_2:7434224-7434243 | Msa1046800:intron | 35.0% |
| ! | GATGTGGAAGCAAATTTTCT+TGG | + | chr7_2:7434274-7434293 | Msa1046800:CDS | 35.0% |
| TGGTAAGTGAGTATCTTTGA+TGG | + | chr7_2:7434294-7434313 | Msa1046800:intron | 35.0% | |
| TAAACAATACCCCACTAGTT+TGG | + | chr7_2:7434381-7434400 | Msa1046800:intron | 35.0% | |
| GAAGATAATCCAAACTAGTG+GGG | - | chr7_2:7434393-7434412 | None:intergenic | 35.0% | |
| GGAAGATAATCCAAACTAGT+GGG | - | chr7_2:7434394-7434413 | None:intergenic | 35.0% | |
| TGGAAGATAATCCAAACTAG+TGG | - | chr7_2:7434395-7434414 | None:intergenic | 35.0% | |
| ! | CCTTGTCCTAGTTGTATTTT+CGG | + | chr7_2:7434824-7434843 | Msa1046800:CDS | 35.0% |
| GAACATCCGAAAATACAACT+AGG | - | chr7_2:7434833-7434852 | None:intergenic | 35.0% | |
| ! | ACGTGTGTGCATAAGTTTTT+AGG | - | chr7_2:7434902-7434921 | None:intergenic | 35.0% |
| GACATTACTGAATGCATACA+AGG | - | chr7_2:7435109-7435128 | None:intergenic | 35.0% | |
| ! | GAGCCATCTTTTTATGTATC+AGG | + | chr7_2:7435349-7435368 | Msa1046800:intron | 35.0% |
| TGCCCTGATACATAAAAAGA+TGG | - | chr7_2:7435355-7435374 | None:intergenic | 35.0% | |
| AGCTCTGTAAATGACCATTA+AGG | - | chr7_2:7435854-7435873 | None:intergenic | 35.0% | |
| GCTTAAATCTATTCACTGGT+CGG | + | chr7_2:7435891-7435910 | Msa1046800:intron | 35.0% | |
| CAAAAGATGAGAAGAAGCTA+AGG | + | chr7_2:7436043-7436062 | Msa1046800:intron | 35.0% | |
| AGCTAAGGAAGTTTAAACTC+AGG | + | chr7_2:7436058-7436077 | Msa1046800:intron | 35.0% | |
| TTACTCTTCATCAATCCAAG+AGG | - | chr7_2:7436089-7436108 | None:intergenic | 35.0% | |
| GAAATGCCTGTAACAAACAT+TGG | - | chr7_2:7436309-7436328 | None:intergenic | 35.0% | |
| GCCACAGAAAATCCAAAAAA+AGG | - | chr7_2:7436331-7436350 | None:intergenic | 35.0% | |
| !! | ATTATGCTTTCCAGGTTGAT+TGG | + | chr7_2:7436705-7436724 | Msa1046800:intron | 35.0% |
| ! | TGTGGCTTTTGCTAAAATCA+CGG | + | chr7_2:7437017-7437036 | Msa1046800:intron | 35.0% |
| GAGATATCCTTAGTCTGTAA+TGG | + | chr7_2:7437151-7437170 | Msa1046800:intron | 35.0% | |
| ATTTGGTCCATTACAGACTA+AGG | - | chr7_2:7437161-7437180 | None:intergenic | 35.0% | |
| ATAGCAAAGGAAATGTGTCT+GGG | + | chr7_2:7437303-7437322 | Msa1046800:CDS | 35.0% | |
| TATACTTTCTTAAGCTACCC+AGG | - | chr7_2:7437339-7437358 | None:intergenic | 35.0% | |
| ! | AGCTTAAGAAAGTATAGACC+TGG | + | chr7_2:7437343-7437362 | Msa1046800:exon | 35.0% |
| GTTGTATGTGTTTGTATGTG+CGG | + | chr7_2:7437676-7437695 | Msa1046800:three_prime_UTR | 35.0% | |
| AACGCTACAATTTGTAGCTT+CGG | + | chr7_2:7437728-7437747 | Msa1046800:three_prime_UTR | 35.0% | |
| AACGCACGATAAAAAGACAT+TGG | + | chr7_2:7437753-7437772 | Msa1046800:three_prime_UTR | 35.0% | |
| ACGCACGATAAAAAGACATT+GGG | + | chr7_2:7437754-7437773 | Msa1046800:three_prime_UTR | 35.0% | |
| ATTGGGATGCGATAAATCAA+AGG | + | chr7_2:7437771-7437790 | Msa1046800:three_prime_UTR | 35.0% | |
| CCGAAACAGAATCAGCATAT+TGG | - | chr7_2:7432923-7432942 | None:intergenic | 40.0% | |
| CTACAGAAGAAAGCCTCTAA+AGG | + | chr7_2:7433473-7433492 | Msa1046800:intron | 40.0% | |
| GAATAAGCAAGCACCTTTAG+AGG | - | chr7_2:7433489-7433508 | None:intergenic | 40.0% | |
| CACTTAATTAAGGGTCCGTT+TGG | - | chr7_2:7433738-7433757 | None:intergenic | 40.0% | |
| !! | ACAGAAGTGTTTGTGCTGTA+TGG | - | chr7_2:7433767-7433786 | None:intergenic | 40.0% |
| ACAGACCCTAATTCTGAATG+GGG | + | chr7_2:7433939-7433958 | Msa1046800:intron | 40.0% | |
| TGTAGCAAACCCTTCAATCA+TGG | + | chr7_2:7434027-7434046 | Msa1046800:intron | 40.0% | |
| GTAGCAAACCCTTCAATCAT+GGG | + | chr7_2:7434028-7434047 | Msa1046800:intron | 40.0% | |
| GAAAATGGCCCATGATTGAA+GGG | - | chr7_2:7434039-7434058 | None:intergenic | 40.0% | |
| AGAAAATGGCCCATGATTGA+AGG | - | chr7_2:7434040-7434059 | None:intergenic | 40.0% | |
| TGACAGTGAGAGGAAAAACA+GGG | - | chr7_2:7434172-7434191 | None:intergenic | 40.0% | |
| TTGACAGTGAGAGGAAAAAC+AGG | - | chr7_2:7434173-7434192 | None:intergenic | 40.0% | |
| !! | ACTTCTTGGATTGGTTGATG+TGG | + | chr7_2:7434258-7434277 | Msa1046800:CDS | 40.0% |
| ACTGAGAAGATCCCATAATC+TGG | - | chr7_2:7434415-7434434 | None:intergenic | 40.0% | |
| CACCTTATGAACAGTTGTGA+AGG | + | chr7_2:7434662-7434681 | Msa1046800:intron | 40.0% | |
| TGCCTTCACAACTGTTCATA+AGG | - | chr7_2:7434667-7434686 | None:intergenic | 40.0% | |
| TAGCATCACACTTGTAAGTG+AGG | - | chr7_2:7434700-7434719 | None:intergenic | 40.0% | |
| GGTGTAATTGTTTGCATAGC+CGG | + | chr7_2:7434801-7434820 | Msa1046800:CDS | 40.0% | |
| AAATACAACTAGGACAAGGC+CGG | - | chr7_2:7434823-7434842 | None:intergenic | 40.0% | |
| CCGAAAATACAACTAGGACA+AGG | - | chr7_2:7434827-7434846 | None:intergenic | 40.0% | |
| ! | GTATTTTCGGATGTTCATGC+TGG | + | chr7_2:7434837-7434856 | Msa1046800:CDS | 40.0% |
| TGCATTCAGTAATGTCAGTG+AGG | + | chr7_2:7435113-7435132 | Msa1046800:CDS | 40.0% | |
| AAACTCACTGCAAGTGTTTC+AGG | + | chr7_2:7435327-7435346 | Msa1046800:intron | 40.0% | |
| TATCTTTCCATGATTGCCTG+TGG | + | chr7_2:7435474-7435493 | Msa1046800:intron | 40.0% | |
| GTAAATGCAAGCCCATAAGT+AGG | - | chr7_2:7435500-7435519 | None:intergenic | 40.0% | |
| AAGTGACGCAAGTGCATAAA+AGG | - | chr7_2:7435616-7435635 | None:intergenic | 40.0% | |
| ATGGCAATGTTAGGTCTCTT+TGG | + | chr7_2:7435734-7435753 | Msa1046800:CDS | 40.0% | |
| TAAACTCAGGATAAGCCTCT+TGG | + | chr7_2:7436071-7436090 | Msa1046800:intron | 40.0% | |
| TTCGTACCTTAAGCAGAACA+GGG | - | chr7_2:7436378-7436397 | None:intergenic | 40.0% | |
| ATTCGTACCTTAAGCAGAAC+AGG | - | chr7_2:7436379-7436398 | None:intergenic | 40.0% | |
| TATTTCGTCTCACAGCTCAA+CGG | + | chr7_2:7436506-7436525 | Msa1046800:intron | 40.0% | |
| AGTAGTACATCCAATCAACC+TGG | - | chr7_2:7436718-7436737 | None:intergenic | 40.0% | |
| GGTTGATTGGATGTACTACT+TGG | + | chr7_2:7436718-7436737 | Msa1046800:intron | 40.0% | |
| TCAGCATTGTCAATCGTGTT+GGG | + | chr7_2:7436973-7436992 | Msa1046800:intron | 40.0% | |
| TGAATAGACGATGAGTTTGG+TGG | - | chr7_2:7437059-7437078 | None:intergenic | 40.0% | |
| GTCTGAATAGACGATGAGTT+TGG | - | chr7_2:7437062-7437081 | None:intergenic | 40.0% | |
| GTTCTTCAACAGCATTAGCA+GGG | - | chr7_2:7437241-7437260 | None:intergenic | 40.0% | |
| ! | TTTGCTATGAGTTGCTGAAC+TGG | - | chr7_2:7437291-7437310 | None:intergenic | 40.0% |
| AGTTCAGCAACTCATAGCAA+AGG | + | chr7_2:7437290-7437309 | Msa1046800:CDS | 40.0% | |
| CATAGCAAAGGAAATGTGTC+TGG | + | chr7_2:7437302-7437321 | Msa1046800:CDS | 40.0% | |
| ! | CTTCATGGTTTTTCCTTGCA+TGG | - | chr7_2:7437373-7437392 | None:intergenic | 40.0% |
| AGAAGAGCCTCTTTCAGAAA+TGG | + | chr7_2:7437391-7437410 | Msa1046800:three_prime_UTR | 40.0% | |
| GAAGAGCCTCTTTCAGAAAT+GGG | + | chr7_2:7437392-7437411 | Msa1046800:three_prime_UTR | 40.0% | |
| ! | GAATAGCCCATTTCTGAAAG+AGG | - | chr7_2:7437401-7437420 | None:intergenic | 40.0% |
| !! | ATTCTGGTTTCGTGTGTTGC+TGG | + | chr7_2:7433035-7433054 | Msa1046800:five_prime_UTR | 45.0% |
| !! | TTCTGGTTTCGTGTGTTGCT+GGG | + | chr7_2:7433036-7433055 | Msa1046800:five_prime_UTR | 45.0% |
| TCTCTTCTCATCACTGCTAC+TGG | + | chr7_2:7433154-7433173 | Msa1046800:CDS | 45.0% | |
| TATAAAGCCACCTACCTGCA+CGG | - | chr7_2:7434866-7434885 | None:intergenic | 45.0% | |
| GGTGGAAGTAATCCTCGTTT+AGG | + | chr7_2:7435057-7435076 | Msa1046800:intron | 45.0% | |
| ACAAGAACGTCTCCTAAACG+AGG | - | chr7_2:7435072-7435091 | None:intergenic | 45.0% | |
| ATTGCCTGTGGCCTACTTAT+GGG | + | chr7_2:7435486-7435505 | Msa1046800:intron | 45.0% | |
| TGCTGATAGAGAAGAGCTCA+TGG | + | chr7_2:7435715-7435734 | Msa1046800:CDS | 45.0% | |
| GAAGAGCTCATGGCAATGTT+AGG | + | chr7_2:7435725-7435744 | Msa1046800:CDS | 45.0% | |
| GCAATGTTAGGTCTCTTTGG+TGG | + | chr7_2:7435737-7435756 | Msa1046800:CDS | 45.0% | |
| AAATCTATTCACTGGTCGGC+TGG | + | chr7_2:7435895-7435914 | Msa1046800:intron | 45.0% | |
| AATCTATTCACTGGTCGGCT+GGG | + | chr7_2:7435896-7435915 | Msa1046800:intron | 45.0% | |
| TCTAGTCCCTGTTCTGCTTA+AGG | + | chr7_2:7436369-7436388 | Msa1046800:CDS | 45.0% | |
| TAAGACAGACCACATGTCTG+AGG | - | chr7_2:7436561-7436580 | None:intergenic | 45.0% | |
| CATCTTCGCTTACCATGAGA+AGG | + | chr7_2:7436586-7436605 | Msa1046800:CDS | 45.0% | |
| GTTACTGACAGACCTTCTCA+TGG | - | chr7_2:7436601-7436620 | None:intergenic | 45.0% | |
| TGGATGTACTACTTGGCGTT+TGG | + | chr7_2:7436725-7436744 | Msa1046800:CDS | 45.0% | |
| CTCAGCATTGTCAATCGTGT+TGG | + | chr7_2:7436972-7436991 | Msa1046800:intron | 45.0% | |
| CAGCATTGTCAATCGTGTTG+GGG | + | chr7_2:7436974-7436993 | Msa1046800:intron | 45.0% | |
| ! | GGCTTTTGCTAAAATCACGG+TGG | + | chr7_2:7437020-7437039 | Msa1046800:intron | 45.0% |
| GATGTTTCGTCGTATTGCAG+AGG | + | chr7_2:7437194-7437213 | Msa1046800:intron | 45.0% | |
| ! | TCGTCGTATTGCAGAGGTTT+TGG | + | chr7_2:7437200-7437219 | Msa1046800:intron | 45.0% |
| GGTTCTTCAACAGCATTAGC+AGG | - | chr7_2:7437242-7437261 | None:intergenic | 45.0% | |
| AGAACCTGTTGCAATCAGAC+AGG | + | chr7_2:7437256-7437275 | Msa1046800:CDS | 45.0% | |
| TCATCCTGTCTGATTGCAAC+AGG | - | chr7_2:7437263-7437282 | None:intergenic | 45.0% | |
| TGTTGCAATCAGACAGGATG+AGG | + | chr7_2:7437262-7437281 | Msa1046800:CDS | 45.0% | |
| ! | TTTTCCTTGCATGGATCTCC+AGG | - | chr7_2:7437364-7437383 | None:intergenic | 45.0% |
| CTGAAAGAGGCTCTTCTTCA+TGG | - | chr7_2:7437388-7437407 | None:intergenic | 45.0% | |
| TTCTTGCATTGCACTCTTGG+AGG | - | chr7_2:7437443-7437462 | None:intergenic | 45.0% | |
| TGCTTCTTGCATTGCACTCT+TGG | - | chr7_2:7437446-7437465 | None:intergenic | 45.0% | |
| ATGTGTTTGTATGTGCGGTG+AGG | + | chr7_2:7437681-7437700 | Msa1046800:three_prime_UTR | 45.0% | |
| !! | ATAAAAAAAAAAAAAATTGA+CGG | + | chr7_2:7432857-7432876 | Msa1046800:five_prime_UTR | 5.0% |
| ! | GTGTGATGCTACTTGACTGC+TGG | + | chr7_2:7434709-7434728 | Msa1046800:CDS | 50.0% |
| AAGCAGCATGACGCATGGAA+TGG | - | chr7_2:7434736-7434755 | None:intergenic | 50.0% | |
| CATGTAAGCAGCATGACGCA+TGG | - | chr7_2:7434741-7434760 | None:intergenic | 50.0% | |
| ! | CATGCGTCATGCTGCTTACA+TGG | + | chr7_2:7434739-7434758 | Msa1046800:CDS | 50.0% |
| ! | GGAGACGTTCTTGTTATCGC+TGG | + | chr7_2:7435078-7435097 | Msa1046800:CDS | 50.0% |
| AAGTAGGCCACAGGCAATCA+TGG | - | chr7_2:7435484-7435503 | None:intergenic | 50.0% | |
| GATTGCCTGTGGCCTACTTA+TGG | + | chr7_2:7435485-7435504 | Msa1046800:intron | 50.0% | |
| ATCTATTCACTGGTCGGCTG+GGG | + | chr7_2:7435897-7435916 | Msa1046800:intron | 50.0% | |
| CTCTTCTGACCTCAGACATG+TGG | + | chr7_2:7436549-7436568 | Msa1046800:CDS | 50.0% | |
| !! | GCGTTTGGTGCTGTTGTCAT+TGG | + | chr7_2:7436740-7436759 | Msa1046800:CDS | 50.0% |
| !!! | TTGCAGAGGTTTTGGAGACG+AGG | + | chr7_2:7437208-7437227 | Msa1046800:intron | 50.0% |
| TGTCTGGGAGCTCAAAAACC+TGG | + | chr7_2:7437318-7437337 | Msa1046800:CDS | 50.0% | |
| GTCTGGGAGCTCAAAAACCT+GGG | + | chr7_2:7437319-7437338 | Msa1046800:CDS | 50.0% | |
| TAGACCTGGAGATCCATGCA+AGG | + | chr7_2:7437357-7437376 | Msa1046800:three_prime_UTR | 50.0% | |
| CAAGCCCATAAGTAGGCCAC+AGG | - | chr7_2:7435493-7435512 | None:intergenic | 55.0% | |
| GTTCATGCTGGTGACCGTGC+AGG | + | chr7_2:7434849-7434868 | Msa1046800:CDS | 60.0% | |
| ATGCTGGTGACCGTGCAGGT+AGG | + | chr7_2:7434853-7434872 | Msa1046800:intron | 60.0% | |
| CTGGTGACCGTGCAGGTAGG+TGG | + | chr7_2:7434856-7434875 | Msa1046800:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 7432835 | 7437827 | 7432835 | ID=Msa1046800;Name=Msa1046800 |
| chr7_2 | mRNA | 7432835 | 7437827 | 7432835 | ID=Msa1046800-mRNA-1;Parent=Msa1046800;Name=Msa1046800-mRNA-1;_AED=0.13;_eAED=0.13;_QI=250|0.66|0.8|0.9|0.66|0.7|10|478|325 |
| chr7_2 | exon | 7432835 | 7433205 | 7432835 | ID=Msa1046800-mRNA-1:exon:1832;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7434032 | 7434081 | 7434032 | ID=Msa1046800-mRNA-1:exon:1833;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7434238 | 7434295 | 7434238 | ID=Msa1046800-mRNA-1:exon:1834;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7434676 | 7434870 | 7434676 | ID=Msa1046800-mRNA-1:exon:1835;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7435058 | 7435134 | 7435058 | ID=Msa1046800-mRNA-1:exon:1836;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7435698 | 7435780 | 7435698 | ID=Msa1046800-mRNA-1:exon:1837;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7436282 | 7436390 | 7436282 | ID=Msa1046800-mRNA-1:exon:1838;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7436521 | 7436607 | 7436521 | ID=Msa1046800-mRNA-1:exon:1839;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7436719 | 7436780 | 7436719 | ID=Msa1046800-mRNA-1:exon:1840;Parent=Msa1046800-mRNA-1 |
| chr7_2 | exon | 7437214 | 7437827 | 7437214 | ID=Msa1046800-mRNA-1:exon:1841;Parent=Msa1046800-mRNA-1 |
| chr7_2 | five_prime_UTR | 7432835 | 7433084 | 7432835 | ID=Msa1046800-mRNA-1:five_prime_utr;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7433085 | 7433205 | 7433085 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7434032 | 7434081 | 7434032 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7434238 | 7434295 | 7434238 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7434676 | 7434870 | 7434676 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7435058 | 7435134 | 7435058 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7435698 | 7435780 | 7435698 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7436282 | 7436390 | 7436282 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7436521 | 7436607 | 7436521 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7436719 | 7436780 | 7436719 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | CDS | 7437214 | 7437349 | 7437214 | ID=Msa1046800-mRNA-1:cds;Parent=Msa1046800-mRNA-1 |
| chr7_2 | three_prime_UTR | 7437350 | 7437827 | 7437350 | ID=Msa1046800-mRNA-1:three_prime_utr;Parent=Msa1046800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
