AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1004010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1004010 MtrunA17_Chr1g0211491 74.900 502 50 5 196 656 142 608 0.0 723
Msa1004010 MtrunA17_Chr8g0391331 77.755 481 37 6 227 656 203 664 0.0 721
Msa1004010 MtrunA17_Chr4g0067881 77.547 481 38 6 227 656 201 662 0.0 721
Msa1004010 MtrunA17_Chr4g0025921 66.737 475 65 7 227 656 189 615 0.0 597
Msa1004010 MtrunA17_Chr4g0025931 65.263 475 73 6 227 656 175 602 0.0 580
Msa1004010 MtrunA17_Chr7g0214561 87.097 217 9 1 1 198 1 217 1.62e-126 377
Msa1004010 MtrunA17_Chr7g0214561 79.167 48 7 1 182 226 288 335 1.60e-16 81.6
Msa1004010 MtrunA17_Chr7g0266091 45.263 190 83 2 23 191 28 217 3.00e-44 160
Msa1004010 MtrunA17_Chr7g0214571 88.732 71 8 0 74 144 252 322 1.97e-34 134
Msa1004010 MtrunA17_Chr7g0266101 44.172 163 69 2 23 163 28 190 1.00e-32 129
Msa1004010 MtrunA17_Chr4g0072161 26.531 147 100 3 228 370 119 261 1.74e-11 66.6
Msa1004010 MtrunA17_Chr8g0335841 32.743 113 75 1 244 356 233 344 2.50e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1004010 AT4G33760.2 64.496 476 103 5 227 655 69 525 0.0 619
Msa1004010 AT4G33760.1 64.496 476 103 5 227 655 205 661 0.0 618
Msa1004010 AT3G59340.1 64.455 211 56 1 10 201 13 223 1.58e-87 277
Msa1004010 AT3G59340.2 64.455 211 56 1 10 201 40 250 2.19e-87 278
Msa1004010 AT3G59340.3 64.455 211 56 1 10 201 40 250 2.19e-87 278
Msa1004010 AT3G59340.4 64.455 211 56 1 10 201 40 250 2.19e-87 278
Msa1004010 AT3G59310.1 66.364 220 55 1 1 201 1 220 9.95e-84 267
Msa1004010 AT3G59310.2 66.364 220 55 1 1 201 1 220 1.37e-83 268
Msa1004010 AT3G59310.3 68.571 210 47 1 1 191 1 210 5.83e-83 264
Msa1004010 AT3G59330.1 63.889 216 44 2 10 191 11 226 2.95e-79 252
Msa1004010 AT3G59330.3 57.959 245 58 3 10 209 11 255 2.66e-77 248
Msa1004010 AT3G59330.2 58.475 236 48 3 10 202 11 239 8.23e-77 246
Msa1004010 AT3G59320.1 65.803 193 47 1 10 183 11 203 1.34e-71 235
Msa1004010 AT3G59320.2 77.451 102 23 0 82 183 1 102 1.55e-41 151

Find 141 sgRNAs with CRISPR-Local

Find 661 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGACCGTATTAGAGTTTATT+TGG 0.185132 7_1:+1181074 Msa1004010:CDS
TGGACTAAGAACACATTAAT+TGG 0.251260 7_1:+1173656 Msa1004010:CDS
GTTTATTTGGCAAATGAATT+AGG 0.251680 7_1:+1181087 Msa1004010:CDS
AGTACTCAAATTCAGTTCTT+AGG 0.251702 7_1:+1180750 Msa1004010:CDS
ACATTAATTGGCCTTGCTTT+AGG 0.259223 7_1:+1173668 Msa1004010:CDS
TAATAATTGATTAATTATTC+TGG 0.270324 7_1:+1173566 Msa1004010:five_prime_UTR
TTCAGCTTTAGTATTAAGTA+TGG 0.279208 7_1:+1180951 Msa1004010:CDS
TGGTACTATTATATACTTCT+TGG 0.287931 7_1:+1174792 Msa1004010:CDS
ATGGCAATGTTAGGTCTCTT+TGG 0.309096 7_1:+1176282 Msa1004010:CDS
TCGTCGTATTGCAGAGGTTT+TGG 0.323324 7_1:+1177633 Msa1004010:intron
ATTCTGGTTTCGTGTGTTGC+TGG 0.325057 7_1:+1173582 Msa1004010:five_prime_UTR
TTTGCTATGAGTTGCTGAAC+TGG 0.331987 7_1:-1177721 None:intergenic
TCTCAGGCTGAAGCGAAGTT+TGG 0.333178 7_1:+1183343 Msa1004010:intron
TTTCTCAGGGTCTTCCTTCA+AGG 0.336742 7_1:+1180673 Msa1004010:CDS
GGTATCGATGTCTTGATCTA+AGG 0.337704 7_1:+1178422 Msa1004010:intron
TGATGGATATTAAGAAATAT+TGG 0.337858 7_1:+1173636 Msa1004010:CDS
TCGTTCATGTCTTCGGGATT+TGG 0.341973 7_1:-1181412 None:intergenic
CAACTACAGAGGATTTATTA+AGG 0.346842 7_1:+1180980 Msa1004010:CDS
TGCAAGGTCGTTCATGTCTT+CGG 0.347992 7_1:-1181419 None:intergenic
CATGCGTCATGCTGCTTACA+TGG 0.358791 7_1:+1175287 Msa1004010:CDS
TCTCTTCTCATCACTGCTAC+TGG 0.360410 7_1:+1173701 Msa1004010:CDS
GCAAGGTCGTTCATGTCTTC+GGG 0.363435 7_1:-1181418 None:intergenic
CCGAAACAGAATCAGCATAT+TGG 0.364256 7_1:-1173467 None:intergenic
AATGCAGGAGGCATAGCTTT+TGG 0.364469 7_1:+1184367 Msa1004010:intron
CCAATATGCTGATTCTGTTT+CGG 0.368959 7_1:+1173467 Msa1004010:five_prime_UTR
CTAAATACCTGGATTCTTGA+TGG 0.371339 7_1:-1178699 None:intergenic
AATAAATCCTCTGTAGTTGC+AGG 0.372224 7_1:-1180976 None:intergenic
CGACATACAACAAAAGGTTT+TGG 0.374977 7_1:+1181615 Msa1004010:CDS
TATAGATTCAAGAAGATAAC+TGG 0.382296 7_1:+1175328 Msa1004010:CDS
TCATCCTGTCTGATTGCAAC+AGG 0.386095 7_1:-1177693 None:intergenic
TGAAAGATCTTTCAGCTGTC+GGG 0.391819 7_1:-1184527 None:intergenic
GCTATTTAAGCAAATGCTAA+TGG 0.395004 7_1:+1179354 Msa1004010:CDS
ATCCACCTCGGCAGGTGATC+TGG 0.397053 7_1:-1184503 None:intergenic
GGTGGAAGTAATCCTCGTTT+AGG 0.403367 7_1:+1175605 Msa1004010:intron
GGTGTAATTGTTTGCATAGC+CGG 0.409701 7_1:+1175349 Msa1004010:CDS
CACACAACTAGTTATGGAAA+TGG 0.414627 7_1:+1179704 Msa1004010:CDS
GAAGAGCTCATGGCAATGTT+AGG 0.420524 7_1:+1176273 Msa1004010:CDS
TGTGTGGATCTTGACAATAT+TGG 0.424530 7_1:-1178651 None:intergenic
TTCAATCACACTACATATAT+AGG 0.424918 7_1:+1184546 Msa1004010:CDS
CTTATGTCATGGTTTACAAT+GGG 0.425100 7_1:+1181458 Msa1004010:CDS
AATCCACAAAATTGAATGTC+TGG 0.427154 7_1:-1181209 None:intergenic
AGAACTGAATTTGAGTACTT+TGG 0.427991 7_1:-1180746 None:intergenic
CCTTGCATCTGCTCGTGCAT+TGG 0.431267 7_1:+1181435 Msa1004010:CDS
TTAAATAGCTGAGGGCTTTG+TGG 0.433840 7_1:-1179340 None:intergenic
AATGTTTAAGTGGAATGATT+CGG 0.433992 7_1:+1181243 Msa1004010:CDS
CCGACTCTCCAATGTTTAAG+TGG 0.440027 7_1:+1181233 Msa1004010:CDS
GATCCACACAAGAAAGTTCC+CGG 0.442258 7_1:+1178664 Msa1004010:CDS
CTATTATATACTTCTTGGAT+TGG 0.443539 7_1:+1174797 Msa1004010:CDS
TAAACGCGACATACAACAAA+AGG 0.444493 7_1:+1181609 Msa1004010:CDS
TGTTTCTAATACAGGCGAAA+TGG 0.446396 7_1:+1174772 Msa1004010:intron
ATACTTTATGTCAGATTGGT+GGG 0.446432 7_1:+1181569 Msa1004010:intron
TAATGAAATAATAATTAATG+AGG 0.456106 7_1:-1173545 None:intergenic
TTATTAAGGCGATGCTCTGC+GGG 0.459755 7_1:+1180994 Msa1004010:CDS
GAATCATTCCACTTAAACAT+TGG 0.459765 7_1:-1181241 None:intergenic
CTTTCAAGGATACATTTGAA+TGG 0.460817 7_1:-1176319 None:intergenic
GGTTCTTCAACAGCATTAGC+AGG 0.462571 7_1:-1177672 None:intergenic
AAGCAAATGCTAATGGTAGC+TGG 0.467850 7_1:+1179361 Msa1004010:CDS
TTTAGAAAGGACTGTGATGT+TGG 0.485502 7_1:-1173959 None:intergenic
AATCAGCATATTGGATTGGA+TGG 0.487352 7_1:-1173458 None:intergenic
CTTCTTGAAGCTCTTGACAT+GGG 0.487627 7_1:+1183370 Msa1004010:CDS
TTCTTGAAGCTCTTGACATG+GGG 0.488346 7_1:+1183371 Msa1004010:CDS
TTTAGTTCCATCAAGAATCC+AGG 0.490512 7_1:+1178692 Msa1004010:CDS
TTCTGGTTTCGTGTGTTGCT+GGG 0.496245 7_1:+1173583 Msa1004010:five_prime_UTR
TTGCCAAATAAACTCTAATA+CGG 0.497671 7_1:-1181077 None:intergenic
GGAGACGTTCTTGTTATCGC+TGG 0.498105 7_1:+1175626 Msa1004010:CDS
TTTCTCAAGATCACAGAGAA+TGG 0.498577 7_1:+1180818 Msa1004010:CDS
TTCTCTGTGATCTTGAGAAA+AGG 0.499295 7_1:-1180815 None:intergenic
TGAGTTCACACAACTAGTTA+TGG 0.504662 7_1:+1179698 Msa1004010:CDS
TTGAAAGATCTTTCAGCTGT+CGG 0.508108 7_1:-1184528 None:intergenic
TATACTTTATGTCAGATTGG+TGG 0.511613 7_1:+1181568 Msa1004010:intron
TCTGATTCCTTGGAGTGTGG+TGG 0.511716 7_1:+1180701 Msa1004010:CDS
TCGTGCATTGGCTTATGTCA+TGG 0.515105 7_1:+1181447 Msa1004010:CDS
AGCTAGTGCTAATTCAATCA+AGG 0.515903 7_1:+1184414 Msa1004010:CDS
TGTCGGGGATCCACCTCGGC+AGG 0.516196 7_1:-1184511 None:intergenic
AAGAACAACAAGGATGATGA+TGG 0.517507 7_1:+1173619 Msa1004010:exon
TTCTCTGATTCCTTGGAGTG+TGG 0.517839 7_1:+1180698 Msa1004010:CDS
ACTTTATGTCAGATTGGTGG+GGG 0.518977 7_1:+1181571 Msa1004010:intron
TCGGGATTTGGTGCAGTGAA+AGG 0.520261 7_1:-1181400 None:intergenic
GGAGACTGTAGGCATCTCAA+TGG 0.520526 7_1:+1181636 Msa1004010:CDS
GCTTATGTCATGGTTTACAA+TGG 0.521268 7_1:+1181457 Msa1004010:CDS
GGAATCAGAGAAAACCTTGA+AGG 0.521670 7_1:-1180687 None:intergenic
TCTTCTTGAAGCTCTTGACA+TGG 0.521687 7_1:+1183369 Msa1004010:CDS
TAATGAAGAGTTGATCAGAA+AGG 0.523027 7_1:+1179758 Msa1004010:CDS
AGAGACAACATATCTTCTAA+AGG 0.525933 7_1:-1179735 None:intergenic
CACCTTATGAACAGTTGTGA+AGG 0.528488 7_1:+1175210 Msa1004010:intron
AGCATTTGCTTAAATAGCTG+AGG 0.531601 7_1:-1179349 None:intergenic
TACTTTATGTCAGATTGGTG+GGG 0.532670 7_1:+1181570 Msa1004010:intron
CCTCGGCAGGTGATCTGGTG+AGG 0.532789 7_1:-1184498 None:intergenic
ACAGAATCAGCATATTGGAT+TGG 0.535438 7_1:-1173462 None:intergenic
TTGATGGAACTAAATAATCC+CGG 0.537772 7_1:-1178683 None:intergenic
GCAATGTTAGGTCTCTTTGG+TGG 0.537905 7_1:+1176285 Msa1004010:CDS
TGTAGGCATCTCAATGGAGC+AGG 0.544534 7_1:+1181642 Msa1004010:CDS
TGTTGCAATCAGACAGGATG+AGG 0.549578 7_1:+1177695 Msa1004010:CDS
GCAAATAAAATCAGATCACT+TGG 0.551349 7_1:-1181018 None:intergenic
CACCAGATCACCTGCCGAGG+TGG 0.551514 7_1:+1184501 Msa1004010:CDS
TAGCTGAGGGCTTTGTGGCA+AGG 0.556212 7_1:-1179335 None:intergenic
GACATTACTGAATGCATACA+AGG 0.557186 7_1:-1175654 None:intergenic
ATCCCGGGAACTTTCTTGTG+TGG 0.563047 7_1:-1178667 None:intergenic
GCATTTGCTTAAATAGCTGA+GGG 0.564155 7_1:-1179348 None:intergenic
CTCGGCAGGTGATCTGGTGA+GGG 0.567007 7_1:-1184497 None:intergenic
GTGTGATGCTACTTGACTGC+TGG 0.567229 7_1:+1175257 Msa1004010:CDS
ATAACTAGTTGTGTGAACTC+AGG 0.570052 7_1:-1179696 None:intergenic
CCACTTAAACATTGGAGAGT+CGG 0.573150 7_1:-1181233 None:intergenic
TGTCATGGTTTACAATGGGG+TGG 0.579334 7_1:+1181462 Msa1004010:CDS
CATGGTTTACAATGGGGTGG+AGG 0.582592 7_1:+1181465 Msa1004010:CDS
TGCTGATAGAGAAGAGCTCA+TGG 0.583244 7_1:+1176263 Msa1004010:CDS
ATAAATGTTATCAAGTAGCA+AGG 0.584021 7_1:+1179389 Msa1004010:CDS
TGATGGAACTAAATAATCCC+GGG 0.584832 7_1:-1178682 None:intergenic
AGAACCTGTTGCAATCAGAC+AGG 0.585681 7_1:+1177689 Msa1004010:CDS
AATAACTCCACCACACTCCA+AGG 0.590280 7_1:-1180708 None:intergenic
AAGCAGCATGACGCATGGAA+TGG 0.591362 7_1:-1175281 None:intergenic
ACTTCTTGGATTGGTTGATG+TGG 0.592336 7_1:+1174806 Msa1004010:CDS
GAAAGATCTTTCAGCTGTCG+GGG 0.593884 7_1:-1184526 None:intergenic
CATGTAAGCAGCATGACGCA+TGG 0.595629 7_1:-1175286 None:intergenic
AAAGAAATTGACCTAAAGCA+AGG 0.605050 7_1:-1173679 None:intergenic
AAATACAACTAGGACAAGGC+CGG 0.612279 7_1:-1175368 None:intergenic
AGTGGAATGATTCGGAGCAG+AGG 0.612858 7_1:+1181251 Msa1004010:CDS
ATCCACACAAGAAAGTTCCC+GGG 0.613017 7_1:+1178665 Msa1004010:CDS
TTTATTAAGGCGATGCTCTG+CGG 0.614825 7_1:+1180993 Msa1004010:CDS
TGATTCGGAGCAGAGGCTTG+AGG 0.616795 7_1:+1181258 Msa1004010:CDS
AGTTCAGCAACTCATAGCAA+AGG 0.620241 7_1:+1177723 Msa1004010:CDS
TCTTGAAGCTCTTGACATGG+GGG 0.621113 7_1:+1183372 Msa1004010:CDS
ATCGATGTCTTGATCTAAGG+AGG 0.622065 7_1:+1178425 Msa1004010:CDS
TAGGGAAGCAGACAGTGCAA+AGG 0.625460 7_1:+1180787 Msa1004010:CDS
GTTCATGCTGGTGACCGTGC+AGG 0.625656 7_1:+1175397 Msa1004010:CDS
GTTCTTCAACAGCATTAGCA+GGG 0.626050 7_1:-1177671 None:intergenic
TAGCATCACACTTGTAAGTG+AGG 0.628131 7_1:-1175245 None:intergenic
CCTCACCAGATCACCTGCCG+AGG 0.628472 7_1:+1184498 Msa1004010:CDS
CAGCTGTCGGGGATCCACCT+CGG 0.629226 7_1:-1184515 None:intergenic
CCAATGCACGAGCAGATGCA+AGG 0.629430 7_1:-1181435 None:intergenic
TTAGAAGAATTACCATGTGG+CGG 0.640616 7_1:-1183397 None:intergenic
TATAAAGCCACCTACCTGCA+CGG 0.642251 7_1:-1175411 None:intergenic
GAACATCCGAAAATACAACT+AGG 0.652850 7_1:-1175378 None:intergenic
TTATGTCATGGTTTACAATG+GGG 0.661648 7_1:+1181459 Msa1004010:CDS
CCGAAAATACAACTAGGACA+AGG 0.664542 7_1:-1175372 None:intergenic
TATGGATCCTGCAACTACAG+AGG 0.666062 7_1:+1180969 Msa1004010:CDS
CTTTATGTCAGATTGGTGGG+GGG 0.671478 7_1:+1181572 Msa1004010:intron
TGCATTCAGTAATGTCAGTG+AGG 0.688986 7_1:+1175661 Msa1004010:CDS
AGATATCTAGAAGACATACA+TGG 0.691076 7_1:+1178502 Msa1004010:CDS
ACAAGAACGTCTCCTAAACG+AGG 0.721995 7_1:-1175617 None:intergenic
TGAGAACAAGAAGAACAACA+AGG 0.747553 7_1:+1173609 Msa1004010:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGAAATAATAATTAATG+AGG - chr7_1:1173548-1173567 None:intergenic 10.0%
!! TAATAATTGATTAATTATTC+TGG + chr7_1:1173566-1173585 Msa1004010:five_prime_UTR 10.0%
!! ATCATAAGAAAAAAAATATT+TGG - chr7_1:1177610-1177629 None:intergenic 10.0%
!! AAAATGAATATAATTATAGA+TGG - chr7_1:1179794-1179813 None:intergenic 10.0%
!!! ATTTTAAATAAAAGATCAAA+GGG + chr7_1:1179963-1179982 Msa1004010:intron 10.0%
!! TCAATTTAAAAAGTTTAATA+AGG + chr7_1:1179987-1180006 Msa1004010:intron 10.0%
!!! TTTTCATTATTCTTAATTAT+GGG + chr7_1:1181356-1181375 Msa1004010:intron 10.0%
!! TTAACAAAAATGTCTTTAAA+CGG - chr7_1:1174744-1174763 None:intergenic 15.0%
!! AAAAAACCTAATAAGTTTAT+AGG + chr7_1:1175017-1175036 Msa1004010:intron 15.0%
!! AAAAATTGTTATGTTGAATT+TGG + chr7_1:1176109-1176128 Msa1004010:intron 15.0%
!! AAAATTGTTATGTTGAATTT+GGG + chr7_1:1176110-1176129 Msa1004010:intron 15.0%
!!! CTTATTATTTGTTGAAATTT+AGG + chr7_1:1177950-1177969 Msa1004010:intron 15.0%
!! TAGACAAATAAAATGAAATA+AGG - chr7_1:1178748-1178767 None:intergenic 15.0%
!! ACATAACAGATAAATATAAA+AGG - chr7_1:1179081-1179100 None:intergenic 15.0%
!!! CAATCTTTATAATGTAATTT+TGG - chr7_1:1179586-1179605 None:intergenic 15.0%
!! ATTTAATCCAAAAACAAAAA+TGG - chr7_1:1179621-1179640 None:intergenic 15.0%
!!! TTATTTAAAATGAGGATTAT+TGG - chr7_1:1179954-1179973 None:intergenic 15.0%
!!! TTGATCTTTTATTTAAAATG+AGG - chr7_1:1179962-1179981 None:intergenic 15.0%
!!! CATTTTAAATAAAAGATCAA+AGG + chr7_1:1179962-1179981 Msa1004010:intron 15.0%
!!! GTTATTTTTGTTTGAATTTT+AGG + chr7_1:1181186-1181205 Msa1004010:intron 15.0%
!!! CTTTTCATTATTCTTAATTA+TGG + chr7_1:1181355-1181374 Msa1004010:intron 15.0%
!!! TTTTATTCTTATGATTTGTT+GGG - chr7_1:1182451-1182470 None:intergenic 15.0%
!!! ATTTTATTCTTATGATTTGT+TGG - chr7_1:1182452-1182471 None:intergenic 15.0%
!! AATTGAAACATATAGATATA+GGG - chr7_1:1183184-1183203 None:intergenic 15.0%
!! AAATTGAAACATATAGATAT+AGG - chr7_1:1183185-1183204 None:intergenic 15.0%
!!! TGATGGATATTAAGAAATAT+TGG + chr7_1:1173636-1173655 Msa1004010:CDS 20.0%
!!! TATTATTTTTTGTCGTCTTA+TGG + chr7_1:1173922-1173941 Msa1004010:intron 20.0%
!! CAAAAACACATAATTTAGAA+AGG - chr7_1:1173975-1173994 None:intergenic 20.0%
!! TTATTCTTATGTACTCTATT+TGG + chr7_1:1174051-1174070 Msa1004010:intron 20.0%
!!! TAACGTTTTTAGAATAGAAA+TGG - chr7_1:1174109-1174128 None:intergenic 20.0%
!!! GGTTTTATTATTTTCTAAAG+AGG + chr7_1:1174508-1174527 Msa1004010:intron 20.0%
!! TAAACACCTATAAACTTATT+AGG - chr7_1:1175026-1175045 None:intergenic 20.0%
!! AATAAGTTTATAGGTGTTTA+TGG + chr7_1:1175026-1175045 Msa1004010:intron 20.0%
!!! ATTCTCCATATATTTTTTCT+TGG + chr7_1:1175482-1175501 Msa1004010:intron 20.0%
!! TACTGATCATAATAAAAGAT+AGG - chr7_1:1175534-1175553 None:intergenic 20.0%
!! TGATGATATTATCATATCAT+AGG + chr7_1:1175584-1175603 Msa1004010:intron 20.0%
!!! ACTAGTTATTAGTATTGAAA+AGG + chr7_1:1175772-1175791 Msa1004010:intron 20.0%
!! AAATTGTTATGTTGAATTTG+GGG + chr7_1:1176111-1176130 Msa1004010:intron 20.0%
!! AAACAAAATAACAATAACAC+GGG - chr7_1:1176217-1176236 None:intergenic 20.0%
!! GAAACAAAATAACAATAACA+CGG - chr7_1:1176218-1176237 None:intergenic 20.0%
!! CAATATATAATCAACTTTCA+AGG - chr7_1:1176336-1176355 None:intergenic 20.0%
!!! TGAAAGTTGATTATATATTG+AGG + chr7_1:1176336-1176355 Msa1004010:intron 20.0%
!! AGTTCATATATCAAACTAAT+TGG - chr7_1:1176681-1176700 None:intergenic 20.0%
!!! TATAAATATCGAGCTTTTTA+CGG + chr7_1:1176879-1176898 Msa1004010:intron 20.0%
!! TTATGTTTATTATCAAAGTG+TGG + chr7_1:1177425-1177444 Msa1004010:intron 20.0%
!!! TTATTTGTTGAAATTTAGGT+TGG + chr7_1:1177954-1177973 Msa1004010:intron 20.0%
!! AATAGATTTCGTATTCTATT+TGG - chr7_1:1178006-1178025 None:intergenic 20.0%
!!! TGCTTACATTTGTAATTTTT+AGG + chr7_1:1178401-1178420 Msa1004010:intron 20.0%
!! TCAACAGACTTTATAAATAT+TGG + chr7_1:1178836-1178855 Msa1004010:intron 20.0%
!!! TTTTGAGTTTATTTGTATCT+TGG + chr7_1:1179448-1179467 Msa1004010:intron 20.0%
!!! TGCTTTTTTTATACGAAAAA+GGG - chr7_1:1179505-1179524 None:intergenic 20.0%
!!! ATGCTTTTTTTATACGAAAA+AGG - chr7_1:1179506-1179525 None:intergenic 20.0%
!!! TTTCGTATAAAAAAAGCATT+TGG + chr7_1:1179507-1179526 Msa1004010:intron 20.0%
!! AAAAAGTTTAATAAGGTCTA+TGG + chr7_1:1179994-1180013 Msa1004010:intron 20.0%
!! TATAACGACAAAAAACTTAA+GGG + chr7_1:1180084-1180103 Msa1004010:intron 20.0%
!! TTTAATTGATTGTTGCAAAA+TGG - chr7_1:1180140-1180159 None:intergenic 20.0%
!! TGCAACAATCAATTAAATTA+AGG + chr7_1:1180143-1180162 Msa1004010:intron 20.0%
!! GCAACAATCAATTAAATTAA+GGG + chr7_1:1180144-1180163 Msa1004010:intron 20.0%
!!! TATTTGATATAGATCTTTTG+TGG + chr7_1:1180223-1180242 Msa1004010:intron 20.0%
!!! TATACATGATTCGATTTTTA+TGG - chr7_1:1180271-1180290 None:intergenic 20.0%
!! AAATCGAATCATGTATATTA+TGG + chr7_1:1180274-1180293 Msa1004010:intron 20.0%
!!! TTTTAATTCTAGATCAAATC+TGG - chr7_1:1180425-1180444 None:intergenic 20.0%
!! TCTCAAAATATCATAAAACT+GGG - chr7_1:1180868-1180887 None:intergenic 20.0%
!!! ATGTGTAAACCTTTAATTTT+AGG + chr7_1:1180913-1180932 Msa1004010:intron 20.0%
!!! TGTGTAAACCTTTAATTTTA+GGG + chr7_1:1180914-1180933 Msa1004010:intron 20.0%
!! TATTATACTTTATGTCAGAT+TGG + chr7_1:1181565-1181584 Msa1004010:intron 20.0%
!! TGAAAAACATAAATAAGACT+AGG - chr7_1:1181688-1181707 None:intergenic 20.0%
!!! CTTTTCATATTTATTAAGTG+AGG + chr7_1:1181720-1181739 Msa1004010:intron 20.0%
!! TATGAATATACGTATATGTT+TGG + chr7_1:1182577-1182596 Msa1004010:intron 20.0%
!!! TATAAATATTTTCTTGGAAG+TGG + chr7_1:1183068-1183087 Msa1004010:intron 20.0%
!!! TGTTTTTTCCTATCTATATT+TGG + chr7_1:1183120-1183139 Msa1004010:intron 20.0%
!! CTTCAATAAATAAAGAAAAC+TGG - chr7_1:1183522-1183541 None:intergenic 20.0%
!! TATCTCAATATGTTTAATAG+CGG + chr7_1:1184312-1184331 Msa1004010:intron 20.0%
!! TGTTATTATATATCAAATGC+AGG + chr7_1:1184352-1184371 Msa1004010:intron 20.0%
! TCTTCTGATTTAGCTAAAAA+AGG + chr7_1:1173731-1173750 Msa1004010:CDS 25.0%
!!! TCACTTCCTTTTAATTACTT+TGG + chr7_1:1173783-1173802 Msa1004010:intron 25.0%
! TCATGACCAAAGTAATTAAA+AGG - chr7_1:1173792-1173811 None:intergenic 25.0%
! TATCTGCAATGAAAATTGTT+TGG + chr7_1:1174653-1174672 Msa1004010:intron 25.0%
!!! CTTCATATTGTTTCTAATAC+AGG + chr7_1:1174764-1174783 Msa1004010:intron 25.0%
! TGGTACTATTATATACTTCT+TGG + chr7_1:1174792-1174811 Msa1004010:CDS 25.0%
! CTATTATATACTTCTTGGAT+TGG + chr7_1:1174797-1174816 Msa1004010:CDS 25.0%
!! TCTTTAGGTTCTAATTTATG+AGG + chr7_1:1174992-1175011 Msa1004010:intron 25.0%
! TATAGATTCAAGAAGATAAC+TGG + chr7_1:1175328-1175347 Msa1004010:CDS 25.0%
! GACTTCCAAGAAAAAATATA+TGG - chr7_1:1175490-1175509 None:intergenic 25.0%
! TGATATTATCATATCATAGG+TGG + chr7_1:1175587-1175606 Msa1004010:intron 25.0%
!! GTTATTAGTATTGAAAAGGT+TGG + chr7_1:1175776-1175795 Msa1004010:intron 25.0%
!! TCTTAATGTTCGTTTTCATT+AGG + chr7_1:1175829-1175848 Msa1004010:intron 25.0%
! TCTGAATATAATAATGAGCA+TGG - chr7_1:1175936-1175955 None:intergenic 25.0%
! CAAACTGAATTTCATTCAAA+CGG + chr7_1:1176085-1176104 Msa1004010:intron 25.0%
! GATTATATATTGAGGACTAT+TGG + chr7_1:1176344-1176363 Msa1004010:intron 25.0%
!!! TTTTCATTTTGAAGCCTTAA+TGG + chr7_1:1176385-1176404 Msa1004010:intron 25.0%
! AAGGTACGAATTTAAACATA+AGG + chr7_1:1176812-1176831 Msa1004010:intron 25.0%
!!! CATAAGGATTCTAAAGATTT+TGG + chr7_1:1176828-1176847 Msa1004010:intron 25.0%
!! ATAAATATCGAGCTTTTTAC+GGG + chr7_1:1176880-1176899 Msa1004010:intron 25.0%
! AGATAGATAAAAAGGAAGTA+AGG - chr7_1:1177047-1177066 None:intergenic 25.0%
! TTTCTGTGAGATAGATAAAA+AGG - chr7_1:1177055-1177074 None:intergenic 25.0%
! ATTTGTGACTCATAATTAGT+AGG - chr7_1:1177082-1177101 None:intergenic 25.0%
! ACATGCATGAAACTTATTTA+AGG + chr7_1:1177506-1177525 Msa1004010:intron 25.0%
! TTTGGTATTAATTCCTTGTT+TGG + chr7_1:1178292-1178311 Msa1004010:intron 25.0%
!! CATAATTTTACAACCAAACA+AGG - chr7_1:1178308-1178327 None:intergenic 25.0%
!! TCTTTACCTTTTTGTTCATA+AGG + chr7_1:1178616-1178635 Msa1004010:intron 25.0%
! AATCTACCTTATGAACAAAA+AGG - chr7_1:1178625-1178644 None:intergenic 25.0%
! AGATGAAAAATCTAAATACC+TGG - chr7_1:1178713-1178732 None:intergenic 25.0%
!! TTCTCTTTGTTTAGTATGTA+TGG + chr7_1:1178787-1178806 Msa1004010:intron 25.0%
! GATATTGCAATGTTGAATTT+AGG + chr7_1:1178942-1178961 Msa1004010:intron 25.0%
!! TATTACAAACAACTTGCTTA+TGG - chr7_1:1179144-1179163 None:intergenic 25.0%
! ATAAATGTTATCAAGTAGCA+AGG + chr7_1:1179389-1179408 Msa1004010:CDS 25.0%
! AATAGACCTGTATTCTTTAT+GGG + chr7_1:1179820-1179839 Msa1004010:intron 25.0%
! TTGTATAAATGATGAAGAAG+TGG + chr7_1:1179846-1179865 Msa1004010:intron 25.0%
!!! TTTTTTGTCGTTATAGGTTT+TGG - chr7_1:1180079-1180098 None:intergenic 25.0%
!!! CTTAAGTTTTTTGTCGTTAT+AGG - chr7_1:1180085-1180104 None:intergenic 25.0%
! CTATAACGACAAAAAACTTA+AGG + chr7_1:1180083-1180102 Msa1004010:intron 25.0%
!!! TTTGAGACGTTTTTTAGTTA+TGG + chr7_1:1180112-1180131 Msa1004010:intron 25.0%
!!! TTGAGACGTTTTTTAGTTAT+GGG + chr7_1:1180113-1180132 Msa1004010:intron 25.0%
! AATCAATTAAATTAAGGGAC+CGG + chr7_1:1180149-1180168 Msa1004010:intron 25.0%
!!! ATTATGGCTAATTTTGAAGT+TGG + chr7_1:1180290-1180309 Msa1004010:intron 25.0%
!! CAGGTTTTTCTTGAAATTAA+GGG + chr7_1:1180322-1180341 Msa1004010:intron 25.0%
! AAGTCATGAAAATATATGAG+AGG - chr7_1:1180519-1180538 None:intergenic 25.0%
!!! TTAGGTATCGTCATTATTTT+AGG + chr7_1:1180768-1180787 Msa1004010:CDS 25.0%
!!! TAGGTATCGTCATTATTTTA+GGG + chr7_1:1180769-1180788 Msa1004010:CDS 25.0%
! GTCTCAAAATATCATAAAAC+TGG - chr7_1:1180869-1180888 None:intergenic 25.0%
!!! GTGTAAACCTTTAATTTTAG+GGG + chr7_1:1180915-1180934 Msa1004010:intron 25.0%
! TCAATATCCCCTAAAATTAA+AGG - chr7_1:1180925-1180944 None:intergenic 25.0%
!!! TTTAATTTTAGGGGATATTG+AGG + chr7_1:1180924-1180943 Msa1004010:intron 25.0%
!!! TTAATTTTAGGGGATATTGA+GGG + chr7_1:1180925-1180944 Msa1004010:intron 25.0%
!! TTCAGCTTTAGTATTAAGTA+TGG + chr7_1:1180951-1180970 Msa1004010:CDS 25.0%
! TTGCCAAATAAACTCTAATA+CGG - chr7_1:1181080-1181099 None:intergenic 25.0%
! GTTTATTTGGCAAATGAATT+AGG + chr7_1:1181087-1181106 Msa1004010:CDS 25.0%
! AATGTTTAAGTGGAATGATT+CGG + chr7_1:1181243-1181262 Msa1004010:CDS 25.0%
! TTTATTGAGAAATACATTGC+TGG - chr7_1:1181306-1181325 None:intergenic 25.0%
!! AATGCAATTCTACCAAATTT+TGG + chr7_1:1181896-1181915 Msa1004010:intron 25.0%
!! ATGCAATTCTACCAAATTTT+GGG + chr7_1:1181897-1181916 Msa1004010:intron 25.0%
!!! AATTTGGTAAGAAGAGTATT+TGG - chr7_1:1181965-1181984 None:intergenic 25.0%
!! ATACTCTTCTTACCAAATTT+TGG + chr7_1:1181966-1181985 Msa1004010:intron 25.0%
!! TACTCTTCTTACCAAATTTT+GGG + chr7_1:1181967-1181986 Msa1004010:intron 25.0%
! AACAAAGGATATATAAGAGA+GGG - chr7_1:1182381-1182400 None:intergenic 25.0%
! AAACAAAGGATATATAAGAG+AGG - chr7_1:1182382-1182401 None:intergenic 25.0%
!! CTATTTCATGTGTGATTTTA+AGG - chr7_1:1182720-1182739 None:intergenic 25.0%
! TCTCAAACGTTAATATCTAT+GGG + chr7_1:1182999-1183018 Msa1004010:intron 25.0%
! TTAGAGAACCAAATATAGAT+AGG - chr7_1:1183131-1183150 None:intergenic 25.0%
!!! ATTTTAGAAGAATTACCATG+TGG - chr7_1:1183403-1183422 None:intergenic 25.0%
!! ACATGGTAATTCTTCTAAAA+TGG + chr7_1:1183402-1183421 Msa1004010:intron 25.0%
! ATAATTCAGTTTATCGACAA+GGG - chr7_1:1183445-1183464 None:intergenic 25.0%
!!! CTGTAGTTTTAACATAAGTT+TGG - chr7_1:1183759-1183778 None:intergenic 25.0%
!!! TATTTCAAGCCATTTTATAG+AGG + chr7_1:1183795-1183814 Msa1004010:intron 25.0%
!! AGAAAAAATAAGTGATGATG+TGG - chr7_1:1183877-1183896 None:intergenic 25.0%
! GAAAATAAAGGATATGTTGT+TGG + chr7_1:1184039-1184058 Msa1004010:intron 25.0%
!!! CTCTAGTATTTGTTTTGAAA+TGG + chr7_1:1184182-1184201 Msa1004010:intron 25.0%
! TATTATATATCAAATGCAGG+AGG + chr7_1:1184355-1184374 Msa1004010:intron 25.0%
TGGACTAAGAACACATTAAT+TGG + chr7_1:1173656-1173675 Msa1004010:CDS 30.0%
AAAGAAATTGACCTAAAGCA+AGG - chr7_1:1173682-1173701 None:intergenic 30.0%
!!! ATTTTTTGTCGTCTTATGGT+AGG + chr7_1:1173926-1173945 Msa1004010:intron 30.0%
!! GTGTTTTTGATGATTGTCTA+TGG + chr7_1:1173986-1174005 Msa1004010:intron 30.0%
! TGCTAGCATAAACATTTTTG+CGG - chr7_1:1174239-1174258 None:intergenic 30.0%
CTCAAATAAGTCAATCCAAA+CGG + chr7_1:1174268-1174287 Msa1004010:intron 30.0%
TGGCATAAGCACTTAATTAA+GGG - chr7_1:1174295-1174314 None:intergenic 30.0%
ATGGCATAAGCACTTAATTA+AGG - chr7_1:1174296-1174315 None:intergenic 30.0%
!!! CTGTTTTTTATAAGCTATCC+AGG + chr7_1:1174374-1174393 Msa1004010:intron 30.0%
TAAAACCCCATTCAGAATTA+GGG - chr7_1:1174495-1174514 None:intergenic 30.0%
ATAAAACCCCATTCAGAATT+AGG - chr7_1:1174496-1174515 None:intergenic 30.0%
AAAAACTAGCATCTCAACAT+TGG - chr7_1:1174534-1174553 None:intergenic 30.0%
! GATCGATATTTAGAAAGCAT+TGG + chr7_1:1174874-1174893 Msa1004010:intron 30.0%
TTGGATTATCTTCCAGATTA+TGG + chr7_1:1174948-1174967 Msa1004010:intron 30.0%
TGGATTATCTTCCAGATTAT+GGG + chr7_1:1174949-1174968 Msa1004010:intron 30.0%
CTCAGTTGAAATAAGTCTTT+AGG + chr7_1:1174977-1174996 Msa1004010:intron 30.0%
AAGTCAACATAAAGCTAGTT+TGG - chr7_1:1175142-1175161 None:intergenic 30.0%
CATCAGACAAACATGATAAA+TGG - chr7_1:1175569-1175588 None:intergenic 30.0%
! TTATGCATTTTGCAACACTT+TGG + chr7_1:1175706-1175725 Msa1004010:intron 30.0%
! TAATGTTCGTTTTCATTAGG+CGG + chr7_1:1175832-1175851 Msa1004010:intron 30.0%
! AGCCATCTTTTTATGTATCA+GGG + chr7_1:1175898-1175917 Msa1004010:intron 30.0%
TTCAGTTTGACAAGAAACTA+TGG - chr7_1:1176074-1176093 None:intergenic 30.0%
!!! TGTTATTTTGTTTCCATTGC+AGG + chr7_1:1176224-1176243 Msa1004010:intron 30.0%
TTTACTAAAAACTCCTGCAA+TGG - chr7_1:1176240-1176259 None:intergenic 30.0%
CTTTCAAGGATACATTTGAA+TGG - chr7_1:1176322-1176341 None:intergenic 30.0%
ATGAGCTTAAATCTATTCAC+TGG + chr7_1:1176435-1176454 Msa1004010:intron 30.0%
! TATCTTCCAATGTTTGTTAC+AGG + chr7_1:1176724-1176743 Msa1004010:intron 30.0%
!!! TTACAGGCATTTCCTTTTTT+TGG + chr7_1:1176740-1176759 Msa1004010:intron 30.0%
!!! TCCTTTTTTTGGATTTTCTG+TGG + chr7_1:1176751-1176770 Msa1004010:intron 30.0%
TAGAACTAATTATGCTTTCC+AGG + chr7_1:1177121-1177140 Msa1004010:intron 30.0%
ACTTTCATTTCTTGTTCTGT+TGG + chr7_1:1177219-1177238 Msa1004010:intron 30.0%
CTTTCATTTCTTGTTCTGTT+GGG + chr7_1:1177220-1177239 Msa1004010:intron 30.0%
AAGATATCCTTAGTCTGTAA+TGG + chr7_1:1177583-1177602 Msa1004010:intron 30.0%
GATTTCGTATTCTATTTGGT+GGG - chr7_1:1178002-1178021 None:intergenic 30.0%
AGATTTCGTATTCTATTTGG+TGG - chr7_1:1178003-1178022 None:intergenic 30.0%
ATTTAAGCAAGAGATGTACT+AGG - chr7_1:1178207-1178226 None:intergenic 30.0%
! TATTACCAAATGACTGCTTT+TGG + chr7_1:1178274-1178293 Msa1004010:intron 30.0%
TAATACCAAAAGCAGTCATT+TGG - chr7_1:1178282-1178301 None:intergenic 30.0%
TTTAATCAAGTTTGACGATG+TGG + chr7_1:1178331-1178350 Msa1004010:intron 30.0%
! TGAATTCTAACATTTTGCTG+CGG + chr7_1:1178455-1178474 Msa1004010:CDS 30.0%
AGATATCTAGAAGACATACA+TGG + chr7_1:1178502-1178521 Msa1004010:CDS 30.0%
AATTCAAATGATGAACCTAC+TGG - chr7_1:1178545-1178564 None:intergenic 30.0%
AAAAAGGTAAAGATCAACAC+AGG - chr7_1:1178609-1178628 None:intergenic 30.0%
TTGATGGAACTAAATAATCC+CGG - chr7_1:1178686-1178705 None:intergenic 30.0%
! TGTTGAATTTAGGAGTTGAT+AGG + chr7_1:1178952-1178971 Msa1004010:intron 30.0%
!!! AGTAAACATCTTTTGAAGCT+GGG - chr7_1:1178987-1179006 None:intergenic 30.0%
!!! TAGTAAACATCTTTTGAAGC+TGG - chr7_1:1178988-1179007 None:intergenic 30.0%
GCTATTTAAGCAAATGCTAA+TGG + chr7_1:1179354-1179373 Msa1004010:CDS 30.0%
TTGTATCTTGGCTTATGTTA+TGG + chr7_1:1179460-1179479 Msa1004010:intron 30.0%
AAGTAAGCATTCTGTATTCT+TGG - chr7_1:1179551-1179570 None:intergenic 30.0%
!! TTACTTTTCGCAGATGTTTT+CGG + chr7_1:1179646-1179665 Msa1004010:intron 30.0%
AGAGACAACATATCTTCTAA+AGG - chr7_1:1179738-1179757 None:intergenic 30.0%
! TAATGAAGAGTTGATCAGAA+AGG + chr7_1:1179758-1179777 Msa1004010:CDS 30.0%
TAAAGAATACAGGTCTATTG+TGG - chr7_1:1179819-1179838 None:intergenic 30.0%
CAATAGACCTGTATTCTTTA+TGG + chr7_1:1179819-1179838 Msa1004010:intron 30.0%
CAATATCCCATAAAGAATAC+AGG - chr7_1:1179829-1179848 None:intergenic 30.0%
TATAAATGATGAAGAAGTGG+TGG + chr7_1:1179849-1179868 Msa1004010:intron 30.0%
CAGAGAATCATCAAAACTTA+AGG - chr7_1:1179907-1179926 None:intergenic 30.0%
AAGTTTAATAAGGTCTATGG+TGG + chr7_1:1179997-1180016 Msa1004010:intron 30.0%
!! GTTTTAACCCTAAATGTCTA+AGG - chr7_1:1180044-1180063 None:intergenic 30.0%
! ACATTTAGGGTTAAAACTGA+TGG + chr7_1:1180047-1180066 Msa1004010:intron 30.0%
AACTAAAAAACGTCTCAAAG+TGG - chr7_1:1180111-1180130 None:intergenic 30.0%
! ATATAGATCTTTTGTGGATG+TGG + chr7_1:1180229-1180248 Msa1004010:intron 30.0%
!!! TTGAAGTTGGTTTTTATTGC+AGG + chr7_1:1180303-1180322 Msa1004010:intron 30.0%
! GCAGGTTTTTCTTGAAATTA+AGG + chr7_1:1180321-1180340 Msa1004010:intron 30.0%
! TTTTCTTGAAATTAAGGGTG+TGG + chr7_1:1180327-1180346 Msa1004010:intron 30.0%
AGCAATGAATAGATATGGTT+CGG + chr7_1:1180387-1180406 Msa1004010:intron 30.0%
!! AAACCACAAAAGTACTATGA+AGG - chr7_1:1180472-1180491 None:intergenic 30.0%
AAGCAAATCTAGGTAAGTTA+TGG - chr7_1:1180606-1180625 None:intergenic 30.0%
! GCTGAGATATAACTTTTCAT+TGG + chr7_1:1180633-1180652 Msa1004010:intron 30.0%
!! TATAACTTTTCATTGGTTGC+AGG + chr7_1:1180640-1180659 Msa1004010:intron 30.0%
AGAACTGAATTTGAGTACTT+TGG - chr7_1:1180749-1180768 None:intergenic 30.0%
AGTACTCAAATTCAGTTCTT+AGG + chr7_1:1180750-1180769 Msa1004010:CDS 30.0%
!! CATAAAACTGGGTATTGATA+GGG - chr7_1:1180857-1180876 None:intergenic 30.0%
!! TCATAAAACTGGGTATTGAT+AGG - chr7_1:1180858-1180877 None:intergenic 30.0%
!! GAGACATGTTTGTTATATTC+CGG + chr7_1:1180884-1180903 Msa1004010:intron 30.0%
AAGGTTTACACATTAAACAC+CGG - chr7_1:1180906-1180925 None:intergenic 30.0%
CAACTACAGAGGATTTATTA+AGG + chr7_1:1180980-1180999 Msa1004010:CDS 30.0%
GCAAATAAAATCAGATCACT+TGG - chr7_1:1181021-1181040 None:intergenic 30.0%
!! GATCTGATTTTATTTGCAGT+TGG + chr7_1:1181024-1181043 Msa1004010:CDS 30.0%
AGACCGTATTAGAGTTTATT+TGG + chr7_1:1181074-1181093 Msa1004010:CDS 30.0%
AATCCACAAAATTGAATGTC+TGG - chr7_1:1181212-1181231 None:intergenic 30.0%
GAATCATTCCACTTAAACAT+TGG - chr7_1:1181244-1181263 None:intergenic 30.0%
CTTATGTCATGGTTTACAAT+GGG + chr7_1:1181458-1181477 Msa1004010:CDS 30.0%
TTATGTCATGGTTTACAATG+GGG + chr7_1:1181459-1181478 Msa1004010:CDS 30.0%
TATACTTTATGTCAGATTGG+TGG + chr7_1:1181568-1181587 Msa1004010:intron 30.0%
ATACTTTATGTCAGATTGGT+GGG + chr7_1:1181569-1181588 Msa1004010:intron 30.0%
TTTATTAAGTGAGGTGATGT+TGG + chr7_1:1181729-1181748 Msa1004010:intron 30.0%
AGACTAGAATCATGTAACAT+CGG + chr7_1:1181764-1181783 Msa1004010:intron 30.0%
AAGATAGTAAGATACTTCAG+TGG - chr7_1:1181864-1181883 None:intergenic 30.0%
! ACTGAAGTATCTTACTATCT+TGG + chr7_1:1181863-1181882 Msa1004010:intron 30.0%
!! ACTCTTTCAAGAAGAGTATT+TGG - chr7_1:1182035-1182054 None:intergenic 30.0%
!! ACTCTTTCAAGAAGAGTATT+TGG - chr7_1:1182035-1182054 None:intergenic 30.0%
TAAGTAACTCTTTCAAGAAG+AGG - chr7_1:1182041-1182060 None:intergenic 30.0%
!! ACTCTTTCAAGAAGAGTATT+TGG - chr7_1:1182035-1182054 None:intergenic 30.0%
CTAAGTAACCAAATCTATGT+GGG - chr7_1:1182518-1182537 None:intergenic 30.0%
! CACATAGATTTGGTTACTTA+GGG + chr7_1:1182517-1182536 Msa1004010:intron 30.0%
ATACGTATATTCATACCGTT+GGG - chr7_1:1182572-1182591 None:intergenic 30.0%
TATACGTATATTCATACCGT+TGG - chr7_1:1182573-1182592 None:intergenic 30.0%
TATGTTTGGATTACATCACA+TGG + chr7_1:1182591-1182610 Msa1004010:intron 30.0%
ATGTTTGGATTACATCACAT+GGG + chr7_1:1182592-1182611 Msa1004010:intron 30.0%
CTCTCAAACGTTAATATCTA+TGG + chr7_1:1182998-1183017 Msa1004010:intron 30.0%
! ATTGCTAACAAGTGTTGTAA+GGG - chr7_1:1183160-1183179 None:intergenic 30.0%
! TATTGCTAACAAGTGTTGTA+AGG - chr7_1:1183161-1183180 None:intergenic 30.0%
!!! TTTTTTTCATATGTGCTCTG+TGG + chr7_1:1183237-1183256 Msa1004010:intron 30.0%
! TTGAAGGCATAAATATAAGC+AGG - chr7_1:1183277-1183296 None:intergenic 30.0%
TGCTTATATTTATGCCTTCA+AGG + chr7_1:1183276-1183295 Msa1004010:intron 30.0%
TGCATTGTAATTTCTTTCTC+AGG + chr7_1:1183327-1183346 Msa1004010:intron 30.0%
GATAATTCAGTTTATCGACA+AGG - chr7_1:1183446-1183465 None:intergenic 30.0%
!!! CTTTTTTCCTTTCCTTGATA+TGG - chr7_1:1183498-1183517 None:intergenic 30.0%
CATATCAAGGAAAGGAAAAA+AGG + chr7_1:1183496-1183515 Msa1004010:intron 30.0%
!! ATTTGCTATTCACACTAATG+CGG + chr7_1:1183654-1183673 Msa1004010:intron 30.0%
! CATTTTATAGAGGAACACTA+GGG + chr7_1:1183805-1183824 Msa1004010:intron 30.0%
! TTTCTCTTTTCACTTGTAAC+CGG + chr7_1:1183892-1183911 Msa1004010:intron 30.0%
! GATTTTACGGATCAAAAGTT+TGG + chr7_1:1183964-1183983 Msa1004010:intron 30.0%
!! TAGCGGTTTTTCGAAAATAA+AGG + chr7_1:1184027-1184046 Msa1004010:intron 30.0%
! AATCAGCATATTGGATTGGA+TGG - chr7_1:1173461-1173480 None:intergenic 35.0%
ACAGAATCAGCATATTGGAT+TGG - chr7_1:1173465-1173484 None:intergenic 35.0%
!! CCAATATGCTGATTCTGTTT+CGG + chr7_1:1173467-1173486 Msa1004010:five_prime_UTR 35.0%
! TAATGAGGTTTTGCTGAGAA+GGG - chr7_1:1173533-1173552 None:intergenic 35.0%
! TTAATGAGGTTTTGCTGAGA+AGG - chr7_1:1173534-1173553 None:intergenic 35.0%
TGAGAACAAGAAGAACAACA+AGG + chr7_1:1173609-1173628 Msa1004010:five_prime_UTR 35.0%
AAGAACAACAAGGATGATGA+TGG + chr7_1:1173619-1173638 Msa1004010:exon 35.0%
!! ACATTAATTGGCCTTGCTTT+AGG + chr7_1:1173668-1173687 Msa1004010:CDS 35.0%
TTTAGAAAGGACTGTGATGT+TGG - chr7_1:1173962-1173981 None:intergenic 35.0%
! TTTTATAAGCTATCCAGGAG+AGG + chr7_1:1174379-1174398 Msa1004010:intron 35.0%
!! CTTATTTTCATTACCTCTCC+TGG - chr7_1:1174395-1174414 None:intergenic 35.0%
! AGACTAATTGGCAAAGCTTT+TGG - chr7_1:1174424-1174443 None:intergenic 35.0%
CATAAGCAGTTGAGACTAAT+TGG - chr7_1:1174436-1174455 None:intergenic 35.0%
ATTCAGAATTAGGGTCTGTT+AGG - chr7_1:1174486-1174505 None:intergenic 35.0%
TAACAGACCCTAATTCTGAA+TGG + chr7_1:1174485-1174504 Msa1004010:intron 35.0%
AACAGACCCTAATTCTGAAT+GGG + chr7_1:1174486-1174505 Msa1004010:intron 35.0%
!! ATCATGGGCCATTTTCTTTA+TGG + chr7_1:1174591-1174610 Msa1004010:intron 35.0%
!! TCATGGGCCATTTTCTTTAT+GGG + chr7_1:1174592-1174611 Msa1004010:intron 35.0%
AGCAGTTCCCATAAAGAAAA+TGG - chr7_1:1174602-1174621 None:intergenic 35.0%
TTCTTTATGGGAACTGCTTA+TGG + chr7_1:1174604-1174623 Msa1004010:intron 35.0%
TCTTTATGGGAACTGCTTAT+GGG + chr7_1:1174605-1174624 Msa1004010:intron 35.0%
! CTTATGGGAAGTATAAGAGA+TGG + chr7_1:1174620-1174639 Msa1004010:intron 35.0%
ACAGGGCAGAAATAACATAA+CGG - chr7_1:1174703-1174722 None:intergenic 35.0%
! TGTTTCTAATACAGGCGAAA+TGG + chr7_1:1174772-1174791 Msa1004010:intron 35.0%
! GATGTGGAAGCAAATTTTCT+TGG + chr7_1:1174822-1174841 Msa1004010:CDS 35.0%
TGGTAAGTGAGTATCTTTGA+TGG + chr7_1:1174842-1174861 Msa1004010:intron 35.0%
TAAACAATACCCCACTAGTT+TGG + chr7_1:1174929-1174948 Msa1004010:intron 35.0%
GAAGATAATCCAAACTAGTG+GGG - chr7_1:1174941-1174960 None:intergenic 35.0%
GGAAGATAATCCAAACTAGT+GGG - chr7_1:1174942-1174961 None:intergenic 35.0%
TGGAAGATAATCCAAACTAG+TGG - chr7_1:1174943-1174962 None:intergenic 35.0%
! CCTTGTCCTAGTTGTATTTT+CGG + chr7_1:1175372-1175391 Msa1004010:CDS 35.0%
GAACATCCGAAAATACAACT+AGG - chr7_1:1175381-1175400 None:intergenic 35.0%
! ACGTGTGTGCATAAGTTTTT+AGG - chr7_1:1175450-1175469 None:intergenic 35.0%
GACATTACTGAATGCATACA+AGG - chr7_1:1175657-1175676 None:intergenic 35.0%
! GAGCCATCTTTTTATGTATC+AGG + chr7_1:1175897-1175916 Msa1004010:intron 35.0%
TGCCCTGATACATAAAAAGA+TGG - chr7_1:1175903-1175922 None:intergenic 35.0%
AGCTCTGTAAATGACCATTA+AGG - chr7_1:1176402-1176421 None:intergenic 35.0%
GCTTAAATCTATTCACTGGT+CGG + chr7_1:1176439-1176458 Msa1004010:intron 35.0%
CAAAAGATGAGAAGAAGCTA+AGG + chr7_1:1176638-1176657 Msa1004010:intron 35.0%
GAAATGCCTGTAACAAACAT+TGG - chr7_1:1176733-1176752 None:intergenic 35.0%
GCCACAGAAAATCCAAAAAA+AGG - chr7_1:1176755-1176774 None:intergenic 35.0%
!! ATTATGCTTTCCAGGTTGAT+TGG + chr7_1:1177129-1177148 Msa1004010:intron 35.0%
!!! CTGTTGGGATTCTTTTTTTC+TGG + chr7_1:1177235-1177254 Msa1004010:intron 35.0%
! TGTGGCTTTTGCTAAAATCA+CGG + chr7_1:1177443-1177462 Msa1004010:intron 35.0%
ATTTGGTCCATTACAGACTA+AGG - chr7_1:1177593-1177612 None:intergenic 35.0%
ATAGCAAAGGAAATGTGTCT+GGG + chr7_1:1177736-1177755 Msa1004010:intron 35.0%
TATACTTTCTTAAGCTACCC+AGG - chr7_1:1177772-1177791 None:intergenic 35.0%
! AGCTTAAGAAAGTATAGACC+TGG + chr7_1:1177776-1177795 Msa1004010:intron 35.0%
!! AGAAGACATACATGGTTTTG+TGG + chr7_1:1178510-1178529 Msa1004010:CDS 35.0%
TGTGTGGATCTTGACAATAT+TGG - chr7_1:1178654-1178673 None:intergenic 35.0%
TGATGGAACTAAATAATCCC+GGG - chr7_1:1178685-1178704 None:intergenic 35.0%
! TTTAGTTCCATCAAGAATCC+AGG + chr7_1:1178692-1178711 Msa1004010:CDS 35.0%
CTAAATACCTGGATTCTTGA+TGG - chr7_1:1178702-1178721 None:intergenic 35.0%
GTTTACTACCTACACATCAA+TGG + chr7_1:1179000-1179019 Msa1004010:intron 35.0%
CATTAATGCCATTGATGTGT+AGG - chr7_1:1179011-1179030 None:intergenic 35.0%
GCATTTGCTTAAATAGCTGA+GGG - chr7_1:1179351-1179370 None:intergenic 35.0%
AGCATTTGCTTAAATAGCTG+AGG - chr7_1:1179352-1179371 None:intergenic 35.0%
TGTTATCAAGTAGCAAGGTA+TGG + chr7_1:1179394-1179413 Msa1004010:intron 35.0%
TATCTTGGCTTATGTTATGG+AGG + chr7_1:1179463-1179482 Msa1004010:intron 35.0%
TATAAAGATTGCGATGCAAC+TGG + chr7_1:1179595-1179614 Msa1004010:intron 35.0%
!!! CAACTGGCCATTTTTGTTTT+TGG + chr7_1:1179611-1179630 Msa1004010:intron 35.0%
! TACTTTTCGCAGATGTTTTC+GGG + chr7_1:1179647-1179666 Msa1004010:intron 35.0%
ATAACTAGTTGTGTGAACTC+AGG - chr7_1:1179699-1179718 None:intergenic 35.0%
TGAGTTCACACAACTAGTTA+TGG + chr7_1:1179698-1179717 Msa1004010:CDS 35.0%
CACACAACTAGTTATGGAAA+TGG + chr7_1:1179704-1179723 Msa1004010:CDS 35.0%
TTGGTCTACCTTAGACATTT+AGG + chr7_1:1180033-1180052 Msa1004010:intron 35.0%
TGGTCTACCTTAGACATTTA+GGG + chr7_1:1180034-1180053 Msa1004010:intron 35.0%
TTAGGGTTAAAACTGATGGA+AGG + chr7_1:1180051-1180070 Msa1004010:intron 35.0%
TAGGGTTAAAACTGATGGAA+GGG + chr7_1:1180052-1180071 Msa1004010:intron 35.0%
TCAATTAAGCCATGTTGAAG+TGG + chr7_1:1180176-1180195 Msa1004010:intron 35.0%
CAATTAAGCCATGTTGAAGT+GGG + chr7_1:1180177-1180196 Msa1004010:intron 35.0%
GCTGAAGCAATGAATAGATA+TGG + chr7_1:1180382-1180401 Msa1004010:intron 35.0%
TCTAGATCAAATCTGGTATC+TGG - chr7_1:1180418-1180437 None:intergenic 35.0%
AGCAAAGATGAAGCAAATCT+AGG - chr7_1:1180616-1180635 None:intergenic 35.0%
! AGGTATCTGACATTTTCTCA+GGG + chr7_1:1180660-1180679 Msa1004010:intron 35.0%
TTCTCTGTGATCTTGAGAAA+AGG - chr7_1:1180818-1180837 None:intergenic 35.0%
TTTCTCAAGATCACAGAGAA+TGG + chr7_1:1180818-1180837 Msa1004010:CDS 35.0%
AATAAATCCTCTGTAGTTGC+AGG - chr7_1:1180979-1180998 None:intergenic 35.0%
AAAGCAGATACCAACTTACA+TGG - chr7_1:1181122-1181141 None:intergenic 35.0%
GCTTATGTCATGGTTTACAA+TGG + chr7_1:1181457-1181476 Msa1004010:CDS 35.0%
GTATCAGTCGCAAAATTGTA+AGG - chr7_1:1181539-1181558 None:intergenic 35.0%
TACTTTATGTCAGATTGGTG+GGG + chr7_1:1181570-1181589 Msa1004010:intron 35.0%
TAAACGCGACATACAACAAA+AGG + chr7_1:1181609-1181628 Msa1004010:CDS 35.0%
! CGACATACAACAAAAGGTTT+TGG + chr7_1:1181615-1181634 Msa1004010:CDS 35.0%
TATAATGATGACACAGTGGA+AGG - chr7_1:1181821-1181840 None:intergenic 35.0%
TTCCACTGTGTCATCATTAT+AGG + chr7_1:1181820-1181839 Msa1004010:intron 35.0%
TTCCTATAATGATGACACAG+TGG - chr7_1:1181825-1181844 None:intergenic 35.0%
ATAGTAAGATACTTCAGTGG+CGG - chr7_1:1181861-1181880 None:intergenic 35.0%
!! TTACCAAATTTTGGGAGAAC+AGG + chr7_1:1181975-1181994 Msa1004010:intron 35.0%
ACTCTTTCAAGAAGAGGATT+TGG - chr7_1:1182138-1182157 None:intergenic 35.0%
ATACAAGAGGGAATCATGTT+GGG + chr7_1:1182249-1182268 Msa1004010:intron 35.0%
ACAAGGAATGGAAGAAACAA+AGG - chr7_1:1182396-1182415 None:intergenic 35.0%
CCTAAGTAACCAAATCTATG+TGG - chr7_1:1182519-1182538 None:intergenic 35.0%
! CCACATAGATTTGGTTACTT+AGG + chr7_1:1182516-1182535 Msa1004010:intron 35.0%
ATTTGGTTACTTAGGGTGAT+TGG + chr7_1:1182524-1182543 Msa1004010:intron 35.0%
TTTGGTTACTTAGGGTGATT+GGG + chr7_1:1182525-1182544 Msa1004010:intron 35.0%
TTCTTTAACATGTGCCCTTA+GGG - chr7_1:1183040-1183059 None:intergenic 35.0%
ATTCTTTAACATGTGCCCTT+AGG - chr7_1:1183041-1183060 None:intergenic 35.0%
TTAGAAGAATTACCATGTGG+CGG - chr7_1:1183400-1183419 None:intergenic 35.0%
AGCAGTTATCAATAACTGCA+AGG + chr7_1:1183543-1183562 Msa1004010:intron 35.0%
TATCAATAACTGCAAGGTAG+TGG + chr7_1:1183549-1183568 Msa1004010:intron 35.0%
CAAGTTCACAACACAATCAA+TGG + chr7_1:1183630-1183649 Msa1004010:intron 35.0%
!! TTTGCTATTCACACTAATGC+GGG + chr7_1:1183655-1183674 Msa1004010:intron 35.0%
TGATCCTGAAAACAAGTACT+TGG + chr7_1:1183694-1183713 Msa1004010:intron 35.0%
!! ATTGCCAAGTACTTGTTTTC+AGG - chr7_1:1183701-1183720 None:intergenic 35.0%
CCTAGTGTTCCTCTATAAAA+TGG - chr7_1:1183807-1183826 None:intergenic 35.0%
! CCATTTTATAGAGGAACACT+AGG + chr7_1:1183804-1183823 Msa1004010:intron 35.0%
TTTACGGATCAAAAGTTTGG+TGG + chr7_1:1183967-1183986 Msa1004010:intron 35.0%
TTACGGATCAAAAGTTTGGT+GGG + chr7_1:1183968-1183987 Msa1004010:intron 35.0%
AGTGAAGACACTTGAAATAG+CGG + chr7_1:1184010-1184029 Msa1004010:intron 35.0%
AAGGATATGTTGTTGGAAGA+AGG + chr7_1:1184046-1184065 Msa1004010:intron 35.0%
TATGTTGTTGGAAGAAGGAA+AGG + chr7_1:1184051-1184070 Msa1004010:intron 35.0%
AAATGGTTTCTCTCTCTACT+TGG + chr7_1:1184199-1184218 Msa1004010:intron 35.0%
! TTTCTCTTTTCACTTGCAAC+CGG - chr7_1:1184229-1184248 None:intergenic 35.0%
AGAAAAAACAAGTCATGACG+TGG + chr7_1:1184244-1184263 Msa1004010:intron 35.0%
AGCTAGTGCTAATTCAATCA+AGG + chr7_1:1184414-1184433 Msa1004010:CDS 35.0%
!! GCAAAGCAGTTGATGTTTTT+GGG - chr7_1:1184453-1184472 None:intergenic 35.0%
!! AGCAAAGCAGTTGATGTTTT+TGG - chr7_1:1184454-1184473 None:intergenic 35.0%
TTGAAAGATCTTTCAGCTGT+CGG - chr7_1:1184531-1184550 None:intergenic 35.0%
CCGAAACAGAATCAGCATAT+TGG - chr7_1:1173470-1173489 None:intergenic 40.0%
CTACAGAAGAAAGCCTCTAA+AGG + chr7_1:1174021-1174040 Msa1004010:intron 40.0%
GAATAAGCAAGCACCTTTAG+AGG - chr7_1:1174037-1174056 None:intergenic 40.0%
CACTTAATTAAGGGTCCGTT+TGG - chr7_1:1174286-1174305 None:intergenic 40.0%
!! ACAGAAGTGTTTGTGCTGTA+TGG - chr7_1:1174315-1174334 None:intergenic 40.0%
ACAGACCCTAATTCTGAATG+GGG + chr7_1:1174487-1174506 Msa1004010:intron 40.0%
TGTAGCAAACCCTTCAATCA+TGG + chr7_1:1174575-1174594 Msa1004010:intron 40.0%
GTAGCAAACCCTTCAATCAT+GGG + chr7_1:1174576-1174595 Msa1004010:intron 40.0%
GAAAATGGCCCATGATTGAA+GGG - chr7_1:1174587-1174606 None:intergenic 40.0%
AGAAAATGGCCCATGATTGA+AGG - chr7_1:1174588-1174607 None:intergenic 40.0%
TGACAGTGAGAGGAAAAACA+GGG - chr7_1:1174720-1174739 None:intergenic 40.0%
TTGACAGTGAGAGGAAAAAC+AGG - chr7_1:1174721-1174740 None:intergenic 40.0%
TTTAAACGGTTGACAGTGAG+AGG - chr7_1:1174730-1174749 None:intergenic 40.0%
!! ACTTCTTGGATTGGTTGATG+TGG + chr7_1:1174806-1174825 Msa1004010:CDS 40.0%
ACTGAGAAGATCCCATAATC+TGG - chr7_1:1174963-1174982 None:intergenic 40.0%
CACCTTATGAACAGTTGTGA+AGG + chr7_1:1175210-1175229 Msa1004010:intron 40.0%
TGCCTTCACAACTGTTCATA+AGG - chr7_1:1175215-1175234 None:intergenic 40.0%
TAGCATCACACTTGTAAGTG+AGG - chr7_1:1175248-1175267 None:intergenic 40.0%
GGTGTAATTGTTTGCATAGC+CGG + chr7_1:1175349-1175368 Msa1004010:CDS 40.0%
AAATACAACTAGGACAAGGC+CGG - chr7_1:1175371-1175390 None:intergenic 40.0%
CCGAAAATACAACTAGGACA+AGG - chr7_1:1175375-1175394 None:intergenic 40.0%
! GTATTTTCGGATGTTCATGC+TGG + chr7_1:1175385-1175404 Msa1004010:CDS 40.0%
TGCATTCAGTAATGTCAGTG+AGG + chr7_1:1175661-1175680 Msa1004010:CDS 40.0%
AAACTCACTGCAAGTGTTTC+AGG + chr7_1:1175875-1175894 Msa1004010:intron 40.0%
GTAAATGCAAGCCCATAAGT+AGG - chr7_1:1176048-1176067 None:intergenic 40.0%
ATGGCAATGTTAGGTCTCTT+TGG + chr7_1:1176282-1176301 Msa1004010:CDS 40.0%
GATGCCTTCAAAGCAATACA+AGG + chr7_1:1176585-1176604 Msa1004010:intron 40.0%
! ACAGCCTTGTATTGCTTTGA+AGG - chr7_1:1176592-1176611 None:intergenic 40.0%
TTCGTACCTTAAGCAGAACA+GGG - chr7_1:1176802-1176821 None:intergenic 40.0%
ATTCGTACCTTAAGCAGAAC+AGG - chr7_1:1176803-1176822 None:intergenic 40.0%
TATTTCGTCTCACAGCTCAA+CGG + chr7_1:1176930-1176949 Msa1004010:intron 40.0%
AGTAGTACATCCAATCAACC+TGG - chr7_1:1177142-1177161 None:intergenic 40.0%
GGTTGATTGGATGTACTACT+TGG + chr7_1:1177142-1177161 Msa1004010:intron 40.0%
TCAGCATTGTCAATCGTGTT+GGG + chr7_1:1177399-1177418 Msa1004010:intron 40.0%
TGAATAGACGATGAGTTTGG+TGG - chr7_1:1177485-1177504 None:intergenic 40.0%
GTCTGAATAGACGATGAGTT+TGG - chr7_1:1177488-1177507 None:intergenic 40.0%
GTTCTTCAACAGCATTAGCA+GGG - chr7_1:1177674-1177693 None:intergenic 40.0%
! TTTGCTATGAGTTGCTGAAC+TGG - chr7_1:1177724-1177743 None:intergenic 40.0%
AGTTCAGCAACTCATAGCAA+AGG + chr7_1:1177723-1177742 Msa1004010:CDS 40.0%
CATAGCAAAGGAAATGTGTC+TGG + chr7_1:1177735-1177754 Msa1004010:intron 40.0%
! CTTCATGGTTTTTCCTTGCA+TGG - chr7_1:1177806-1177825 None:intergenic 40.0%
AGAAGAGCCTCTTTCAGAAA+TGG + chr7_1:1177824-1177843 Msa1004010:intron 40.0%
GAAGAGCCTCTTTCAGAAAT+GGG + chr7_1:1177825-1177844 Msa1004010:intron 40.0%
! GAATAGCCCATTTCTGAAAG+AGG - chr7_1:1177834-1177853 None:intergenic 40.0%
AAGCAAGAGATGTACTAGGA+TGG - chr7_1:1178203-1178222 None:intergenic 40.0%
! AAGTTGCTCTATGACGCTTT+TGG + chr7_1:1178240-1178259 Msa1004010:intron 40.0%
!! GGTATCGATGTCTTGATCTA+AGG + chr7_1:1178422-1178441 Msa1004010:intron 40.0%
ATCGATGTCTTGATCTAAGG+AGG + chr7_1:1178425-1178444 Msa1004010:CDS 40.0%
!!! AGACATACATGGTTTTGTGG+AGG + chr7_1:1178513-1178532 Msa1004010:CDS 40.0%
! GTCTTTTGCACATCGTACTT+TGG + chr7_1:1178570-1178589 Msa1004010:intron 40.0%
GATGATGCTTTGTGCACATA+TGG - chr7_1:1179059-1179078 None:intergenic 40.0%
GTCACATGAATTATGAAGCG+AGG + chr7_1:1179301-1179320 Msa1004010:intron 40.0%
TTAAATAGCTGAGGGCTTTG+TGG - chr7_1:1179343-1179362 None:intergenic 40.0%
AAGCAAATGCTAATGGTAGC+TGG + chr7_1:1179361-1179380 Msa1004010:CDS 40.0%
! AATGATGAAGAAGTGGTGGA+CGG + chr7_1:1179853-1179872 Msa1004010:intron 40.0%
GACGGAAGAAGTTGAAGAAA+GGG + chr7_1:1179871-1179890 Msa1004010:intron 40.0%
TGAGGATTATTGGATCATGC+AGG - chr7_1:1179944-1179963 None:intergenic 40.0%
CTAAGGTAGACCAACATTGT+AGG - chr7_1:1180027-1180046 None:intergenic 40.0%
CAATTAAATTAAGGGACCGG+TGG + chr7_1:1180152-1180171 Msa1004010:intron 40.0%
ACATGGCTTAATTGATCCAC+CGG - chr7_1:1180171-1180190 None:intergenic 40.0%
AATTACCAAATCCTTTCCCC+AGG + chr7_1:1180350-1180369 Msa1004010:intron 40.0%
GATCAAATCTGGTATCTGGA+CGG - chr7_1:1180414-1180433 None:intergenic 40.0%
!! CCACAAAAGTACTATGAAGG+AGG - chr7_1:1180469-1180488 None:intergenic 40.0%
! CCTCCTTCATAGTACTTTTG+TGG + chr7_1:1180466-1180485 Msa1004010:intron 40.0%
! CAGGTATCTGACATTTTCTC+AGG + chr7_1:1180659-1180678 Msa1004010:intron 40.0%
GGAATCAGAGAAAACCTTGA+AGG - chr7_1:1180690-1180709 None:intergenic 40.0%
! CAAGGTTTTCTCTGATTCCT+TGG + chr7_1:1180691-1180710 Msa1004010:CDS 40.0%
TTTATTAAGGCGATGCTCTG+CGG + chr7_1:1180993-1181012 Msa1004010:CDS 40.0%
GTTTGATCGACCATGTAAGT+TGG + chr7_1:1181109-1181128 Msa1004010:intron 40.0%
! AGGCCAGACATTCAATTTTG+TGG + chr7_1:1181206-1181225 Msa1004010:intron 40.0%
CCACTTAAACATTGGAGAGT+CGG - chr7_1:1181236-1181255 None:intergenic 40.0%
TCTTAATTATGGGCTTGTGC+AGG + chr7_1:1181366-1181385 Msa1004010:intron 40.0%
TGTAAGGCTCGCAAGTTAAA+GGG - chr7_1:1181523-1181542 None:intergenic 40.0%
TTGTAAGGCTCGCAAGTTAA+AGG - chr7_1:1181524-1181543 None:intergenic 40.0%
ACTTTATGTCAGATTGGTGG+GGG + chr7_1:1181571-1181590 Msa1004010:intron 40.0%
!!! CAAAAGGTTTTGGAGACTGT+AGG + chr7_1:1181625-1181644 Msa1004010:CDS 40.0%
! CTTCTGCTCTATTCGTTTTC+TGG + chr7_1:1181790-1181809 Msa1004010:intron 40.0%
TAGTAAGATACTTCAGTGGC+GGG - chr7_1:1181860-1181879 None:intergenic 40.0%
!! CTACCAAATTTTGGGAGAAC+AGG + chr7_1:1181905-1181924 Msa1004010:intron 40.0%
CTTCCTGTTCTCCCAAAATT+TGG - chr7_1:1181911-1181930 None:intergenic 40.0%
CTTCCTGTTCTCCCAAAATT+TGG - chr7_1:1181911-1181930 None:intergenic 40.0%
AGAAAGCAGAATGTTAGAGC+AGG + chr7_1:1182219-1182238 Msa1004010:intron 40.0%
GATACAAGAGGGAATCATGT+TGG + chr7_1:1182248-1182267 Msa1004010:intron 40.0%
TACAAGAGGGAATCATGTTG+GGG + chr7_1:1182250-1182269 Msa1004010:intron 40.0%
TGTGGTGTTCAAGTCTCTTA+TGG - chr7_1:1182320-1182339 None:intergenic 40.0%
!!! TAAGGTTTTGGGTAAGAGTG+TGG - chr7_1:1182338-1182357 None:intergenic 40.0%
CACTCTTACCCAAAACCTTA+AGG + chr7_1:1182338-1182357 Msa1004010:intron 40.0%
TACCCAAAACCTTAAGGCAA+TGG + chr7_1:1182344-1182363 Msa1004010:intron 40.0%
ACCCAAAACCTTAAGGCAAT+GGG + chr7_1:1182345-1182364 Msa1004010:intron 40.0%
! ACCCATTGCCTTAAGGTTTT+GGG - chr7_1:1182349-1182368 None:intergenic 40.0%
! AACCCATTGCCTTAAGGTTT+TGG - chr7_1:1182350-1182369 None:intergenic 40.0%
ACATTCCTCCCACATAGATT+TGG + chr7_1:1182507-1182526 Msa1004010:intron 40.0%
AGTAACCAAATCTATGTGGG+AGG - chr7_1:1182515-1182534 None:intergenic 40.0%
! TTGGGTCTTCAACTTTTCCT+TGG + chr7_1:1182543-1182562 Msa1004010:intron 40.0%
! TGGGTCTTCAACTTTTCCTT+GGG + chr7_1:1182544-1182563 Msa1004010:intron 40.0%
TTGGATTACATCACATGGGA+CGG + chr7_1:1182596-1182615 Msa1004010:intron 40.0%
AAATGCTAACAAGTGCCCTA+AGG + chr7_1:1183022-1183041 Msa1004010:intron 40.0%
AATGCTAACAAGTGCCCTAA+GGG + chr7_1:1183023-1183042 Msa1004010:intron 40.0%
TTTATCGACAAGGGAGGAAT+GGG - chr7_1:1183436-1183455 None:intergenic 40.0%
ATTCAGTTTATCGACAAGGG+AGG - chr7_1:1183442-1183461 None:intergenic 40.0%
GTTTGTGCACAACCATATCA+AGG + chr7_1:1183483-1183502 Msa1004010:intron 40.0%
TGCACAACCATATCAAGGAA+AGG + chr7_1:1183488-1183507 Msa1004010:intron 40.0%
TCAGGATCAGCGTTAATACT+TGG - chr7_1:1183683-1183702 None:intergenic 40.0%
! TGTCCAAAGAGTGTGTTAGA+GGG - chr7_1:1183836-1183855 None:intergenic 40.0%
TTGGACACACTTCCATCTAT+TGG + chr7_1:1183849-1183868 Msa1004010:intron 40.0%
TCATCAGTTCTCTCTCTACT+TGG - chr7_1:1183922-1183941 None:intergenic 40.0%
GATGAATGTGATGCTGTAGT+CGG + chr7_1:1183937-1183956 Msa1004010:intron 40.0%
TTGGACACACTCTCATCTAT+TGG - chr7_1:1184272-1184291 None:intergenic 40.0%
TGAAAGATCTTTCAGCTGTC+GGG - chr7_1:1184530-1184549 None:intergenic 40.0%
!! ATTCTGGTTTCGTGTGTTGC+TGG + chr7_1:1173582-1173601 Msa1004010:five_prime_UTR 45.0%
!! TTCTGGTTTCGTGTGTTGCT+GGG + chr7_1:1173583-1173602 Msa1004010:five_prime_UTR 45.0%
TCTCTTCTCATCACTGCTAC+TGG + chr7_1:1173701-1173720 Msa1004010:CDS 45.0%
TATAAAGCCACCTACCTGCA+CGG - chr7_1:1175414-1175433 None:intergenic 45.0%
GGTGGAAGTAATCCTCGTTT+AGG + chr7_1:1175605-1175624 Msa1004010:intron 45.0%
ACAAGAACGTCTCCTAAACG+AGG - chr7_1:1175620-1175639 None:intergenic 45.0%
GATCTTTCCATGATTGCCTG+TGG + chr7_1:1176022-1176041 Msa1004010:intron 45.0%
ATTGCCTGTGGCCTACTTAT+GGG + chr7_1:1176034-1176053 Msa1004010:intron 45.0%
TGCTGATAGAGAAGAGCTCA+TGG + chr7_1:1176263-1176282 Msa1004010:CDS 45.0%
GAAGAGCTCATGGCAATGTT+AGG + chr7_1:1176273-1176292 Msa1004010:CDS 45.0%
GCAATGTTAGGTCTCTTTGG+TGG + chr7_1:1176285-1176304 Msa1004010:CDS 45.0%
AAATCTATTCACTGGTCGGC+TGG + chr7_1:1176443-1176462 Msa1004010:intron 45.0%
AATCTATTCACTGGTCGGCT+GGG + chr7_1:1176444-1176463 Msa1004010:intron 45.0%
TCTAGTCCCTGTTCTGCTTA+AGG + chr7_1:1176793-1176812 Msa1004010:intron 45.0%
TAAGACAGACCACATGTCTG+AGG - chr7_1:1176985-1177004 None:intergenic 45.0%
CATCTTCGCTTACCATGAGA+AGG + chr7_1:1177010-1177029 Msa1004010:intron 45.0%
GTTACTGACAGACCTTCTCA+TGG - chr7_1:1177025-1177044 None:intergenic 45.0%
TGGATGTACTACTTGGCGTT+TGG + chr7_1:1177149-1177168 Msa1004010:intron 45.0%
CTCAGCATTGTCAATCGTGT+TGG + chr7_1:1177398-1177417 Msa1004010:intron 45.0%
CAGCATTGTCAATCGTGTTG+GGG + chr7_1:1177400-1177419 Msa1004010:intron 45.0%
! GGCTTTTGCTAAAATCACGG+TGG + chr7_1:1177446-1177465 Msa1004010:intron 45.0%
GATGTTTCGTCGTATTGCAG+AGG + chr7_1:1177627-1177646 Msa1004010:intron 45.0%
! TCGTCGTATTGCAGAGGTTT+TGG + chr7_1:1177633-1177652 Msa1004010:intron 45.0%
GGTTCTTCAACAGCATTAGC+AGG - chr7_1:1177675-1177694 None:intergenic 45.0%
AGAACCTGTTGCAATCAGAC+AGG + chr7_1:1177689-1177708 Msa1004010:CDS 45.0%
TCATCCTGTCTGATTGCAAC+AGG - chr7_1:1177696-1177715 None:intergenic 45.0%
TGTTGCAATCAGACAGGATG+AGG + chr7_1:1177695-1177714 Msa1004010:CDS 45.0%
! TTTTCCTTGCATGGATCTCC+AGG - chr7_1:1177797-1177816 None:intergenic 45.0%
CTGAAAGAGGCTCTTCTTCA+TGG - chr7_1:1177821-1177840 None:intergenic 45.0%
TTCTTGCATTGCACTCTTGG+AGG - chr7_1:1177876-1177895 None:intergenic 45.0%
TGCTTCTTGCATTGCACTCT+TGG - chr7_1:1177879-1177898 None:intergenic 45.0%
TGTACTAGGATGGAGCAAAG+AGG - chr7_1:1178193-1178212 None:intergenic 45.0%
! CATTTTGCTGCGGCATAATG+TGG + chr7_1:1178465-1178484 Msa1004010:CDS 45.0%
!! TTGTGGAGGTACTATCCAGT+AGG + chr7_1:1178527-1178546 Msa1004010:intron 45.0%
GCACATCGTACTTTGGTTGT+TGG + chr7_1:1178577-1178596 Msa1004010:intron 45.0%
GATCCACACAAGAAAGTTCC+CGG + chr7_1:1178664-1178683 Msa1004010:CDS 45.0%
ATCCACACAAGAAAGTTCCC+GGG + chr7_1:1178665-1178684 Msa1004010:CDS 45.0%
GGACGGAAGAAGTTGAAGAA+AGG + chr7_1:1179870-1179889 Msa1004010:intron 45.0%
AGGTAGACCAACATTGTAGG+TGG - chr7_1:1180024-1180043 None:intergenic 45.0%
TAAGCCATGTTGAAGTGGGA+AGG + chr7_1:1180181-1180200 Msa1004010:intron 45.0%
AACACCTTCCCACTTCAACA+TGG - chr7_1:1180188-1180207 None:intergenic 45.0%
CTTCAGCATATGTAAGCCTG+GGG - chr7_1:1180369-1180388 None:intergenic 45.0%
GCTTCAGCATATGTAAGCCT+GGG - chr7_1:1180370-1180389 None:intergenic 45.0%
TGCTTCAGCATATGTAAGCC+TGG - chr7_1:1180371-1180390 None:intergenic 45.0%
TTTCTCAGGGTCTTCCTTCA+AGG + chr7_1:1180673-1180692 Msa1004010:CDS 45.0%
TTCTCTGATTCCTTGGAGTG+TGG + chr7_1:1180698-1180717 Msa1004010:CDS 45.0%
AATAACTCCACCACACTCCA+AGG - chr7_1:1180711-1180730 None:intergenic 45.0%
TATGGATCCTGCAACTACAG+AGG + chr7_1:1180969-1180988 Msa1004010:CDS 45.0%
TTATTAAGGCGATGCTCTGC+GGG + chr7_1:1180994-1181013 Msa1004010:CDS 45.0%
CCGACTCTCCAATGTTTAAG+TGG + chr7_1:1181233-1181252 Msa1004010:CDS 45.0%
TCGTTCATGTCTTCGGGATT+TGG - chr7_1:1181415-1181434 None:intergenic 45.0%
TGCAAGGTCGTTCATGTCTT+CGG - chr7_1:1181422-1181441 None:intergenic 45.0%
!! TCGTGCATTGGCTTATGTCA+TGG + chr7_1:1181447-1181466 Msa1004010:CDS 45.0%
TGTCATGGTTTACAATGGGG+TGG + chr7_1:1181462-1181481 Msa1004010:CDS 45.0%
CTTTATGTCAGATTGGTGGG+GGG + chr7_1:1181572-1181591 Msa1004010:intron 45.0%
TTAAGTGAGGTGATGTTGGC+TGG + chr7_1:1181733-1181752 Msa1004010:intron 45.0%
AGCAGAATGTTAGAGCAGGA+AGG + chr7_1:1182223-1182242 Msa1004010:intron 45.0%
GTTCAAGTCTCTTATGGTCC+TGG - chr7_1:1182314-1182333 None:intergenic 45.0%
! ACCTTAAGGCAATGGGTTCA+TGG + chr7_1:1182352-1182371 Msa1004010:intron 45.0%
! CCTTAAGGCAATGGGTTCAT+GGG + chr7_1:1182353-1182372 Msa1004010:intron 45.0%
TCTTCCATTCCTTGTCGATG+TGG + chr7_1:1182401-1182420 Msa1004010:intron 45.0%
CTTCCATTCCTTGTCGATGT+GGG + chr7_1:1182402-1182421 Msa1004010:intron 45.0%
GATTATGTCCCACATCGACA+AGG - chr7_1:1182413-1182432 None:intergenic 45.0%
TGTGTAAGAGTGGGGAAGTT+AGG - chr7_1:1182490-1182509 None:intergenic 45.0%
TGGGAGGAATGTGTAAGAGT+GGG - chr7_1:1182499-1182518 None:intergenic 45.0%
TGGATTACATCACATGGGAC+GGG + chr7_1:1182597-1182616 Msa1004010:intron 45.0%
! CGGGACAGTTGATTCATTCA+AGG + chr7_1:1182616-1182635 Msa1004010:intron 45.0%
TTATCGACAAGGGAGGAATG+GGG - chr7_1:1183435-1183454 None:intergenic 45.0%
GTTTATCGACAAGGGAGGAA+TGG - chr7_1:1183437-1183456 None:intergenic 45.0%
ACACCCTCTAACACACTCTT+TGG + chr7_1:1183830-1183849 Msa1004010:intron 45.0%
! GTGTCCAAAGAGTGTGTTAG+AGG - chr7_1:1183837-1183856 None:intergenic 45.0%
GATGATGTGGCTCCAATAGA+TGG - chr7_1:1183864-1183883 None:intergenic 45.0%
TCTCTCTCTACTTGGAGAAC+CGG - chr7_1:1184207-1184226 None:intergenic 45.0%
! TGTAGTCGGCGGAGATTTTA+CGG + chr7_1:1183951-1183970 Msa1004010:intron 45.0%
!! AGTTTGGTGGGTTGTAGTGA+AGG + chr7_1:1183980-1183999 Msa1004010:intron 45.0%
!! GTTTGGTGGGTTGTAGTGAA+GGG + chr7_1:1183981-1184000 Msa1004010:intron 45.0%
! AAGATCTTGTTTGTCGTCCG+AGG + chr7_1:1184100-1184119 Msa1004010:intron 45.0%
TCTCTCTCTACTTGGAGAAC+CGG + chr7_1:1184207-1184226 Msa1004010:intron 45.0%
AATCGATGTGCCTCATGCTT+TGG - chr7_1:1184291-1184310 None:intergenic 45.0%
!! AATGCAGGAGGCATAGCTTT+TGG + chr7_1:1184367-1184386 Msa1004010:intron 45.0%
! AGCTTTTGGTCTGGACAGAT+TGG + chr7_1:1184381-1184400 Msa1004010:CDS 45.0%
GAAAGATCTTTCAGCTGTCG+GGG - chr7_1:1184529-1184548 None:intergenic 45.0%
!! ATAAAAAAAAAAAAAATTGA+CGG + chr7_1:1173404-1173423 Msa1004010:five_prime_UTR 5.0%
!!! TTTATTTTGTTTTATTTTAT+TGG + chr7_1:1179176-1179195 Msa1004010:intron 5.0%
!!! AAAAAATATAAATATTTTCT+TGG + chr7_1:1183062-1183081 Msa1004010:intron 5.0%
! GTGTGATGCTACTTGACTGC+TGG + chr7_1:1175257-1175276 Msa1004010:CDS 50.0%
AAGCAGCATGACGCATGGAA+TGG - chr7_1:1175284-1175303 None:intergenic 50.0%
CATGTAAGCAGCATGACGCA+TGG - chr7_1:1175289-1175308 None:intergenic 50.0%
! CATGCGTCATGCTGCTTACA+TGG + chr7_1:1175287-1175306 Msa1004010:CDS 50.0%
! GGAGACGTTCTTGTTATCGC+TGG + chr7_1:1175626-1175645 Msa1004010:CDS 50.0%
AAGTAGGCCACAGGCAATCA+TGG - chr7_1:1176032-1176051 None:intergenic 50.0%
GATTGCCTGTGGCCTACTTA+TGG + chr7_1:1176033-1176052 Msa1004010:intron 50.0%
ATCTATTCACTGGTCGGCTG+GGG + chr7_1:1176445-1176464 Msa1004010:intron 50.0%
CTCTTCTGACCTCAGACATG+TGG + chr7_1:1176973-1176992 Msa1004010:intron 50.0%
!! GCGTTTGGTGCTGTTGTCAT+TGG + chr7_1:1177164-1177183 Msa1004010:intron 50.0%
!!! TTGCAGAGGTTTTGGAGACG+AGG + chr7_1:1177641-1177660 Msa1004010:intron 50.0%
TGTCTGGGAGCTCAAAAACC+TGG + chr7_1:1177751-1177770 Msa1004010:intron 50.0%
GTCTGGGAGCTCAAAAACCT+GGG + chr7_1:1177752-1177771 Msa1004010:intron 50.0%
TAGACCTGGAGATCCATGCA+AGG + chr7_1:1177790-1177809 Msa1004010:intron 50.0%
ATCCCGGGAACTTTCTTGTG+TGG - chr7_1:1178670-1178689 None:intergenic 50.0%
! TGGTGGACCACCTACAATGT+TGG + chr7_1:1180014-1180033 Msa1004010:intron 50.0%
GTAAGCCTGGGGAAAGGATT+TGG - chr7_1:1180358-1180377 None:intergenic 50.0%
GCATATGTAAGCCTGGGGAA+AGG - chr7_1:1180364-1180383 None:intergenic 50.0%
TCTGATTCCTTGGAGTGTGG+TGG + chr7_1:1180701-1180720 Msa1004010:CDS 50.0%
TAGGGAAGCAGACAGTGCAA+AGG + chr7_1:1180787-1180806 Msa1004010:CDS 50.0%
! AGTGGAATGATTCGGAGCAG+AGG + chr7_1:1181251-1181270 Msa1004010:CDS 50.0%
!! TCGGGATTTGGTGCAGTGAA+AGG - chr7_1:1181403-1181422 None:intergenic 50.0%
GCAAGGTCGTTCATGTCTTC+GGG - chr7_1:1181421-1181440 None:intergenic 50.0%
CATGGTTTACAATGGGGTGG+AGG + chr7_1:1181465-1181484 Msa1004010:CDS 50.0%
GGAGACTGTAGGCATCTCAA+TGG + chr7_1:1181636-1181655 Msa1004010:CDS 50.0%
TGTAGGCATCTCAATGGAGC+AGG + chr7_1:1181642-1181661 Msa1004010:CDS 50.0%
AGCAGGAAGGTCGATACAAG+AGG + chr7_1:1182236-1182255 Msa1004010:intron 50.0%
GCAGGAAGGTCGATACAAGA+GGG + chr7_1:1182237-1182256 Msa1004010:intron 50.0%
TTTGACCCATTGCCGCTATC+GGG - chr7_1:1182288-1182307 None:intergenic 50.0%
GTTTGACCCATTGCCGCTAT+CGG - chr7_1:1182289-1182308 None:intergenic 50.0%
CCCATGAACCCATTGCCTTA+AGG - chr7_1:1182356-1182375 None:intergenic 50.0%
TGTCCCACATCGACAAGGAA+TGG - chr7_1:1182408-1182427 None:intergenic 50.0%
GGGAGGAATGTGTAAGAGTG+GGG - chr7_1:1182498-1182517 None:intergenic 50.0%
GTGGGAGGAATGTGTAAGAG+TGG - chr7_1:1182500-1182519 None:intergenic 50.0%
! ACTTTTCCTTGGGCTCCCAA+CGG + chr7_1:1182554-1182573 Msa1004010:intron 50.0%
CATGCCTGACTTCGACTGAT+CGG + chr7_1:1183299-1183318 Msa1004010:intron 50.0%
AGTTCCGATCAGTCGAAGTC+AGG - chr7_1:1183306-1183325 None:intergenic 50.0%
TCTCAGGCTGAAGCGAAGTT+TGG + chr7_1:1183343-1183362 Msa1004010:intron 50.0%
GAATGTGATGCTGTAGTCGG+CGG + chr7_1:1183940-1183959 Msa1004010:intron 50.0%
GAAAGGCGAACAACGTGATG+AGG + chr7_1:1184068-1184087 Msa1004010:intron 50.0%
CTTGTTTGTCGTCCGAGGAA+AGG + chr7_1:1184105-1184124 Msa1004010:intron 50.0%
AGTGGAAAGAGTGGAGGAAG+CGG + chr7_1:1184134-1184153 Msa1004010:intron 50.0%
! GAGAGTGTGTCCAAAGCATG+AGG + chr7_1:1184278-1184297 Msa1004010:intron 50.0%
!! AGGAGGCATAGCTTTTGGTC+TGG + chr7_1:1184372-1184391 Msa1004010:intron 50.0%
CAAGCCCATAAGTAGGCCAC+AGG - chr7_1:1176041-1176060 None:intergenic 55.0%
GATGGAGCAAAGAGGCAAGC+TGG - chr7_1:1178185-1178204 None:intergenic 55.0%
! TAGCTGAGGGCTTTGTGGCA+AGG - chr7_1:1179338-1179357 None:intergenic 55.0%
! TGATTCGGAGCAGAGGCTTG+AGG + chr7_1:1181258-1181277 Msa1004010:CDS 55.0%
CCAATGCACGAGCAGATGCA+AGG - chr7_1:1181438-1181457 None:intergenic 55.0%
CCTTGCATCTGCTCGTGCAT+TGG + chr7_1:1181435-1181454 Msa1004010:CDS 55.0%
GGCTCGCAAGTTAAAGGGAG+AGG - chr7_1:1181518-1181537 None:intergenic 55.0%
GGGAATCATGTTGGGGAGTC+CGG + chr7_1:1182257-1182276 Msa1004010:intron 55.0%
GGAATCATGTTGGGGAGTCC+GGG + chr7_1:1182258-1182277 Msa1004010:intron 55.0%
GAATCATGTTGGGGAGTCCG+GGG + chr7_1:1182259-1182278 Msa1004010:intron 55.0%
TTGACCCATTGCCGCTATCG+GGG - chr7_1:1182287-1182306 None:intergenic 55.0%
TTCATACCGTTGGGAGCCCA+AGG - chr7_1:1182563-1182582 None:intergenic 55.0%
CGAAGTCAGGCATGCCTTGA+AGG - chr7_1:1183293-1183312 None:intergenic 55.0%
AGGCGAACAACGTGATGAGG+TGG + chr7_1:1184071-1184090 Msa1004010:intron 55.0%
CGAACAACGTGATGAGGTGG+TGG + chr7_1:1184074-1184093 Msa1004010:intron 55.0%
TTGTCGTCCGAGGAAAGGAG+AGG + chr7_1:1184110-1184129 Msa1004010:intron 55.0%
TGTCGTCCGAGGAAAGGAGA+GGG + chr7_1:1184111-1184130 Msa1004010:intron 55.0%
TCCACTCCCTCTCCTTTCCT+CGG - chr7_1:1184120-1184139 None:intergenic 55.0%
AGGAGAGGGAGTGGAAAGAG+TGG + chr7_1:1184125-1184144 Msa1004010:intron 55.0%
AGAGGGAGTGGAAAGAGTGG+AGG + chr7_1:1184128-1184147 Msa1004010:intron 55.0%
GTTCATGCTGGTGACCGTGC+AGG + chr7_1:1175397-1175416 Msa1004010:CDS 60.0%
ATGCTGGTGACCGTGCAGGT+AGG + chr7_1:1175401-1175420 Msa1004010:intron 60.0%
CGGCAATGGGTCAAACGTCC+AGG + chr7_1:1182293-1182312 Msa1004010:intron 60.0%
TCCGAGGAAAGGAGAGGGAG+TGG + chr7_1:1184116-1184135 Msa1004010:intron 60.0%
GGAAAGAGTGGAGGAAGCGG+TGG + chr7_1:1184137-1184156 Msa1004010:intron 60.0%
AAGAGTGGAGGAAGCGGTGG+TGG + chr7_1:1184140-1184159 Msa1004010:intron 60.0%
CTCGGCAGGTGATCTGGTGA+GGG - chr7_1:1184500-1184519 None:intergenic 60.0%
ATCCACCTCGGCAGGTGATC+TGG - chr7_1:1184506-1184525 None:intergenic 60.0%
CTGGTGACCGTGCAGGTAGG+TGG + chr7_1:1175404-1175423 Msa1004010:intron 65.0%
! GGAGCCCCGATAGCGGCAAT+GGG + chr7_1:1182280-1182299 Msa1004010:intron 65.0%
CCTCGGCAGGTGATCTGGTG+AGG - chr7_1:1184501-1184520 None:intergenic 65.0%
CCTCACCAGATCACCTGCCG+AGG + chr7_1:1184498-1184517 Msa1004010:CDS 65.0%
CACCAGATCACCTGCCGAGG+TGG + chr7_1:1184501-1184520 Msa1004010:CDS 65.0%
CAGCTGTCGGGGATCCACCT+CGG - chr7_1:1184518-1184537 None:intergenic 65.0%
AGTCCGGGGAGCCCCGATAG+CGG + chr7_1:1182273-1182292 Msa1004010:intron 70.0%
TTGCCGCTATCGGGGCTCCC+CGG - chr7_1:1182279-1182298 None:intergenic 70.0%
! GGGAGCCCCGATAGCGGCAA+TGG + chr7_1:1182279-1182298 Msa1004010:intron 70.0%
GACATGGGGGCTCCGCCACA+TGG + chr7_1:1183385-1183404 Msa1004010:CDS 70.0%
TGTCGGGGATCCACCTCGGC+AGG - chr7_1:1184514-1184533 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 1173382 1184567 1173382 ID=Msa1004010;Name=Msa1004010
chr7_1 mRNA 1173382 1184567 1173382 ID=Msa1004010-mRNA-1;Parent=Msa1004010;Name=Msa1004010-mRNA-1;_AED=0.24;_eAED=0.24;_QI=250|0.70|0.72|1|0.94|0.94|18|0|659
chr7_1 exon 1173382 1173752 1173382 ID=Msa1004010-mRNA-1:exon:521;Parent=Msa1004010-mRNA-1
chr7_1 exon 1173948 1173985 1173948 ID=Msa1004010-mRNA-1:exon:522;Parent=Msa1004010-mRNA-1
chr7_1 exon 1174786 1174843 1174786 ID=Msa1004010-mRNA-1:exon:523;Parent=Msa1004010-mRNA-1
chr7_1 exon 1175224 1175418 1175224 ID=Msa1004010-mRNA-1:exon:524;Parent=Msa1004010-mRNA-1
chr7_1 exon 1175606 1175682 1175606 ID=Msa1004010-mRNA-1:exon:525;Parent=Msa1004010-mRNA-1
chr7_1 exon 1176246 1176328 1176246 ID=Msa1004010-mRNA-1:exon:526;Parent=Msa1004010-mRNA-1
chr7_1 exon 1177647 1177751 1177647 ID=Msa1004010-mRNA-1:exon:527;Parent=Msa1004010-mRNA-1
chr7_1 exon 1178423 1178534 1178423 ID=Msa1004010-mRNA-1:exon:528;Parent=Msa1004010-mRNA-1
chr7_1 exon 1178642 1178713 1178642 ID=Msa1004010-mRNA-1:exon:529;Parent=Msa1004010-mRNA-1
chr7_1 exon 1179319 1179410 1179319 ID=Msa1004010-mRNA-1:exon:530;Parent=Msa1004010-mRNA-1
chr7_1 exon 1179659 1179779 1179659 ID=Msa1004010-mRNA-1:exon:531;Parent=Msa1004010-mRNA-1
chr7_1 exon 1180662 1180839 1180662 ID=Msa1004010-mRNA-1:exon:532;Parent=Msa1004010-mRNA-1
chr7_1 exon 1180935 1181122 1180935 ID=Msa1004010-mRNA-1:exon:533;Parent=Msa1004010-mRNA-1
chr7_1 exon 1181208 1181279 1181208 ID=Msa1004010-mRNA-1:exon:534;Parent=Msa1004010-mRNA-1
chr7_1 exon 1181388 1181486 1181388 ID=Msa1004010-mRNA-1:exon:535;Parent=Msa1004010-mRNA-1
chr7_1 exon 1181583 1181699 1181583 ID=Msa1004010-mRNA-1:exon:536;Parent=Msa1004010-mRNA-1
chr7_1 exon 1183349 1183406 1183349 ID=Msa1004010-mRNA-1:exon:537;Parent=Msa1004010-mRNA-1
chr7_1 exon 1184374 1184567 1184374 ID=Msa1004010-mRNA-1:exon:538;Parent=Msa1004010-mRNA-1
chr7_1 five_prime_UTR 1173382 1173631 1173382 ID=Msa1004010-mRNA-1:five_prime_utr;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1173632 1173752 1173632 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1173948 1173985 1173948 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1174786 1174843 1174786 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1175224 1175418 1175224 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1175606 1175682 1175606 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1176246 1176328 1176246 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1177647 1177751 1177647 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1178423 1178534 1178423 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1178642 1178713 1178642 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1179319 1179410 1179319 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1179659 1179779 1179659 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1180662 1180839 1180662 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1180935 1181122 1180935 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1181208 1181279 1181208 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1181388 1181486 1181388 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1181583 1181699 1181583 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1183349 1183406 1183349 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
chr7_1 CDS 1184374 1184567 1184374 ID=Msa1004010-mRNA-1:cds;Parent=Msa1004010-mRNA-1
Gene Sequence

>Msa1004010

ATGATGATGGATATTAAGAAATATTGGACTAAGAACACATTAATTGGCCTTGCTTTAGGTCAATTTCTTTCTCTTCTCATCACTGCTACTGGTTTCGCTTCTTCTGATTTAGCTAAAAAAGGAATTAATGCTCCAACATCACAGTCCTTTCTAAATTATGCGAAATGGTACTATTATATACTTCTTGGATTGGTTGATGTGGAAGCAAATTTTCTTGTTGTGAAGGCATATCAATACACCTCACTTACAAGTGTGATGCTACTTGACTGCTGGTCCATTCCATGCGTCATGCTGCTTACATGGATTTTCTTGAAAACAAAATATAGATTCAAGAAGATAACTGGTGTAATTGTTTGCATAGCCGGCCTTGTCCTAGTTGTATTTTCGGATGTTCATGCTGGTGACCGTGCAGGTGGAAGTAATCCTCGTTTAGGAGACGTTCTTGTTATCGCTGGCGCTACCTTGTATGCATTCAGTAATGTCAGTGAGGAGTTTTTAGTAAAAAATGCTGATAGAGAAGAGCTCATGGCAATGTTAGGTCTCTTTGGTGGCATCATCAGTGCCATTCAAATAGGTTTTGGAGACGAGGATCAACACCCTGCTAATGCTGTTGAAGAACCTGTTGCAATCAGACAGGATGAGGAAGCCAGTTCAGCAACTCATAGCAAAGGAAATGTGTATCGATGTCTTGATCTAAGGAGGCAGCAATTGAATTCTAACATTTTGCTGCGGCATAATGTGGTTAAACTCATACGAAGATATCTAGAAGACATACATGGTTTTGTGGAGATTGAAACTCCAATATTGTCAAGATCCACACAAGAAAGTTCCCGGGATTATTTAGTTCCATCAAGAATCCAGCGAGGAACATTCTATGCCTTGCCACAAAGCCCTCAGCTATTTAAGCAAATGCTAATGGTAGCTGGTTTTGATAAATGTTATCAAGTAGCAAGATGTTTTCGGGATGAAGATTTAAGAGCTGATAGACAACCTGAGTTCACACAACTAGTTATGGAAATGGCTTTTACTCCTTTAGAAGATATGTTGTCTCTTAATGAAGAGTTGATCAGAAAGGTATCTGACATTTTCTCAGGGTCTTCCTTCAAGGTTTTCTCTGATTCCTTGGAGTGTGGTGGAGTTATTAAAGTATTGTGTGTACCAAAGTACTCAAATTCAGTTCTTAGGTATCGTCATTATTTTAGGGAAGCAGACAGTGCAAAGGTTTTACCTTTTCTCAAGATCACAGAGAATGGGGATATTGAGGGAATTTCAGCTTTAGTATTAAGTATGGATCCTGCAACTACAGAGGATTTATTAAGGCGATGCTCTGCGGGACCAAGTGATCTGATTTTATTTGCAGTTGGTCATCATGCATCTGTAAATAAAACTCTAGACCGTATTAGAGTTTATTTGGCAAATGAATTAGGTTTGATCGACCATGCCAGACATTCAATTTTGTGGATTACCGACTCTCCAATGTTTAAGTGGAATGATTCGGAGCAGAGGCTTGAGGCTCTTCATCATCCTTTCACTGCACCAAATCCCGAAGACATGAACGACCTTGCATCTGCTCGTGCATTGGCTTATGTCATGGTTTACAATGGGGTGGAGATTGGTGGGGGGAGTTTGAGAAATTATAAACGCGACATACAACAAAAGGTTTTGGAGACTGTAGGCATCTCAATGGAGCAGGCTAGTACATGCGACTCTATTCCTAGTCTTATTTATGCTGAAGCGAAGTTTGGATGTCTTCTTGAAGCTCTTGACATGGGGGCTCCGCCACATGGAGGCATAGCTTTTGGTCTGGACAGATTGGTTATGTTGCTAGCTAGTGCTAATTCAATCAAGGATGTCATTGCTTTCCCAAAAACATCAACTGCTTTGCTAAAAACAAGAACTGCACAGTGTGCCCTCACCAGATCACCTGCCGAGGTGGATCCCCGACAGCTGAAAGATCTTTCAATCACACTACATATATAG

Protein sequence

>Msa1004010

MMMDIKKYWTKNTLIGLALGQFLSLLITATGFASSDLAKKGINAPTSQSFLNYAKWYYYILLGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLLTWIFLKTKYRFKKITGVIVCIAGLVLVVFSDVHAGDRAGGSNPRLGDVLVIAGATLYAFSNVSEEFLVKNADREELMAMLGLFGGIISAIQIGFGDEDQHPANAVEEPVAIRQDEEASSATHSKGNVYRCLDLRRQQLNSNILLRHNVVKLIRRYLEDIHGFVEIETPILSRSTQESSRDYLVPSRIQRGTFYALPQSPQLFKQMLMVAGFDKCYQVARCFRDEDLRADRQPEFTQLVMEMAFTPLEDMLSLNEELIRKVSDIFSGSSFKVFSDSLECGGVIKVLCVPKYSNSVLRYRHYFREADSAKVLPFLKITENGDIEGISALVLSMDPATTEDLLRRCSAGPSDLILFAVGHHASVNKTLDRIRVYLANELGLIDHARHSILWITDSPMFKWNDSEQRLEALHHPFTAPNPEDMNDLASARALAYVMVYNGVEIGGGSLRNYKRDIQQKVLETVGISMEQASTCDSIPSLIYAEAKFGCLLEALDMGAPPHGGIAFGLDRLVMLLASANSIKDVIAFPKTSTALLKTRTAQCALTRSPAEVDPRQLKDLSITLHI*