AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1047320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1047320 MtrunA17_Chr7g0215281 97.010 301 9 0 1 301 1 301 0.0 597
Msa1047320 MtrunA17_Chr6g0457431 80.625 160 26 2 1 160 1 155 3.12e-91 268
Msa1047320 MtrunA17_Chr6g0469271 44.395 223 114 4 1 213 1 223 1.32e-57 185
Msa1047320 MtrunA17_Chr4g0053911 50.888 169 67 2 3 159 1 165 1.43e-54 177
Msa1047320 MtrunA17_Chr6g0470651 51.149 174 68 6 1 164 1 167 1.24e-52 172
Msa1047320 MtrunA17_Chr5g0401401 64.545 110 39 0 3 112 1 110 5.13e-52 170
Msa1047320 MtrunA17_Chr6g0470631 50.575 174 69 6 1 164 1 167 1.68e-51 169
Msa1047320 MtrunA17_Chr1g0207471 60.577 104 41 0 3 106 1 104 6.12e-45 151
Msa1047320 MtrunA17_Chr1g0209841 42.029 207 98 5 1 196 1 196 1.04e-44 151
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1047320 AT3G02550.1 60.351 285 69 4 1 281 1 245 4.08e-113 328
Msa1047320 AT1G67100.1 82.270 141 22 2 1 138 1 141 1.42e-82 249
Msa1047320 AT1G68510.1 62.941 170 53 2 1 160 1 170 4.17e-74 227
Msa1047320 AT3G49940.1 70.000 110 33 0 3 112 1 110 4.08e-55 179
Msa1047320 AT5G67420.2 65.455 110 38 0 3 112 1 110 5.67e-54 176
Msa1047320 AT5G67420.1 65.455 110 38 0 3 112 1 110 5.67e-54 176
Msa1047320 AT4G37540.1 66.667 111 37 0 3 113 1 111 3.61e-53 174

Find 118 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCTTGTTCCACAAATT+TGG 0.171439 7_2:-8122732 Msa1047320:five_prime_UTR
GTGGCATTAGCTTGTGATTC+AGG 0.204656 7_2:+8122292 None:intergenic
AAACCGACTGAACCGTAAAT+TGG 0.257065 7_2:+8121867 None:intergenic
GGCTCATGGAATGTGGAGTT+GGG 0.290152 7_2:-8121240 Msa1047320:CDS
TTTCCACATTCAGGCAGGTT+GGG 0.291826 7_2:+8122691 None:intergenic
GGTTTGGCTTGGTTCGGTTT+TGG 0.303637 7_2:-8121194 Msa1047320:three_prime_UTR
ACTTTCTCATCTACATAGTT+TGG 0.307581 7_2:+8121001 None:intergenic
ACCAGCACGACCGTAGAATT+TGG 0.324902 7_2:+8122258 None:intergenic
TGGAGAGGAAAAGGTTGGTT+TGG 0.330903 7_2:-8121352 Msa1047320:CDS
GCAGCTGCTTCCGAAGTTAT+TGG 0.331265 7_2:+8121774 None:intergenic
TGTAAGTTGTAACAACTTGA+TGG 0.341415 7_2:+8120961 None:intergenic
TTGACATAGCTGCCAGCTTC+CGG 0.350615 7_2:+8121836 None:intergenic
TATCCGGCTTAGACCGGGTT+TGG 0.359852 7_2:-8121210 Msa1047320:exon
GTTGGTTTGGAGCTGACTCT+TGG 0.364251 7_2:-8121339 Msa1047320:CDS
TCTCTTGTCTCTTGTACAAA+TGG 0.366587 7_2:+8121144 None:intergenic
CTCTCACCGGTTCGGTCAAC+CGG 0.370315 7_2:+8121375 None:intergenic
CGAATAGTGAATCCAATTTA+CGG 0.370383 7_2:-8121879 Msa1047320:CDS
CTCTTCTTGTATCTTCGGCT+TGG 0.390746 7_2:+8121623 None:intergenic
GGAGTTGGGGCTTCAATATC+CGG 0.399627 7_2:-8121226 Msa1047320:CDS
GAAAAGAAGGGTTGTATTGA+AGG 0.400262 7_2:-8121274 Msa1047320:CDS
TGGCTCATGGAATGTGGAGT+TGG 0.402516 7_2:-8121241 Msa1047320:CDS
CCTCTCCACTCTCACCGGTT+CGG 0.407185 7_2:+8121367 None:intergenic
TTGGTTTGGAGCTGACTCTT+GGG 0.409856 7_2:-8121338 Msa1047320:CDS
GATCTTATTTAGAGATGAAC+CGG 0.409879 7_2:-8121418 Msa1047320:CDS
GGCTTAGACCGGGTTTGGCT+TGG 0.414881 7_2:-8121205 Msa1047320:exon
GTCTGAGGCGGTTGCGTTGG+TGG 0.415235 7_2:-8121478 Msa1047320:CDS
GCTGACTCTTGGGCTTGAAC+CGG 0.417029 7_2:-8121328 Msa1047320:CDS
AGACCGGGTTTGGCTTGGTT+CGG 0.417093 7_2:-8121200 Msa1047320:three_prime_UTR
CGGTTCATCACCTCTTCAAC+CGG 0.419225 7_2:+8121534 None:intergenic
CGACACATGACGGATGTCAT+AGG 0.427071 7_2:+8121725 None:intergenic
GTTTATTATGGTCCGGAAGC+TGG 0.428216 7_2:-8121848 Msa1047320:CDS
ACCGATCGGTTCGGTTGAAC+CGG 0.429864 7_2:-8121553 Msa1047320:CDS
TTCCACATTCAGGCAGGTTG+GGG 0.431458 7_2:+8122692 None:intergenic
ACCGATCGGTTCAGTTGAAC+CGG 0.432038 7_2:+8121566 None:intergenic
CTTCAATATCCGGCTTAGAC+CGG 0.432623 7_2:-8121216 Msa1047320:exon
ACGGTTCAGTCGGTTTATTA+TGG 0.442488 7_2:-8121860 Msa1047320:CDS
CGGTGAGAGTGGAGAGGAAA+AGG 0.443712 7_2:-8121361 Msa1047320:CDS
CGAACCTGGACGAAGATGTT+CGG 0.443982 7_2:+8122210 None:intergenic
TGGCATTAGCTTGTGATTCA+GGG 0.445704 7_2:+8122293 None:intergenic
GAACCTGGACGAAGATGTTC+GGG 0.446611 7_2:+8122211 None:intergenic
GTATTGAAGGATTGTGGTGT+TGG 0.451012 7_2:-8121261 Msa1047320:CDS
CTTCGGAAGCAGCTGCTAAC+GGG 0.456571 7_2:-8121767 Msa1047320:CDS
GCCAAATTCTACGGTCGTGC+TGG 0.457716 7_2:-8122259 Msa1047320:CDS
TTCAATATCCGGCTTAGACC+GGG 0.462376 7_2:-8121215 Msa1047320:exon
CTCTTGTCTCTTGTACAAAT+GGG 0.463807 7_2:+8121145 None:intergenic
CCAGTCTGAGGCGGTTGCGT+TGG 0.463877 7_2:-8121481 Msa1047320:CDS
GAAGCAGCTGCTAACGGGAG+GGG 0.464479 7_2:-8121762 Msa1047320:CDS
ACATGATAAACACGTGAAAC+CGG 0.466817 7_2:+8121309 None:intergenic
GTGTTTCTCGCCAAATTCTA+CGG 0.467341 7_2:-8122268 Msa1047320:CDS
GAGAGTGGAGAGGAAAAGGT+TGG 0.474231 7_2:-8121357 Msa1047320:CDS
GAGAACAAGGGATTTGAATC+CGG 0.474733 7_2:-8121585 Msa1047320:CDS
ATGAAGCCGGTTGACCGAAC+CGG 0.475639 7_2:-8121381 Msa1047320:CDS
GAGGCGGTTGCGTTGGTGGA+TGG 0.487638 7_2:-8121474 Msa1047320:CDS
ATTTAGAGATGAACCGGAGT+TGG 0.489333 7_2:-8121412 Msa1047320:CDS
AAAGAGTAGTAATGAGAACA+AGG 0.495367 7_2:-8121598 Msa1047320:CDS
TGGTTCCTGTGAAGAAAAGA+AGG 0.496741 7_2:-8121287 Msa1047320:CDS
AAGCCAAACCCGGTCTAAGC+CGG 0.498806 7_2:+8121207 None:intergenic
TGCATATGATGATGCATCAA+TGG 0.501398 7_2:+8120933 None:intergenic
TTCAACTGAACCGATCGGTT+CGG 0.501566 7_2:-8121562 Msa1047320:CDS
TCCGAAGTTATTGGTGTGAT+CGG 0.501864 7_2:+8121783 None:intergenic
ATGTCATAGGCTTTGAGTGG+TGG 0.508004 7_2:+8121738 None:intergenic
GAGATGAACCGGAGTTGGAC+CGG 0.508299 7_2:-8121407 Msa1047320:CDS
TGTAGATGAGAAAGTACATT+CGG 0.513037 7_2:-8120993 Msa1047320:three_prime_UTR
GACTCTTTGTTGAGTTAACT+CGG 0.513097 7_2:+8121677 None:intergenic
TCAAGTTGTTACAACTTACA+AGG 0.514711 7_2:-8120958 Msa1047320:three_prime_UTR
CCAACGCAACCGCCTCAGAC+TGG 0.515999 7_2:+8121481 None:intergenic
AGGATTGTGGTGTTGGCTCA+TGG 0.516288 7_2:-8121254 Msa1047320:CDS
GTTCGGGACCGGCGTTAACA+AGG 0.520425 7_2:+8122227 None:intergenic
GAAGTAAACAACCAAATTTG+TGG 0.529591 7_2:+8122721 None:intergenic
GTTGACCGAACCGGTGAGAG+TGG 0.534361 7_2:-8121372 Msa1047320:CDS
ACTTCGGAAGCAGCTGCTAA+CGG 0.537457 7_2:-8121768 Msa1047320:CDS
ACGACTCATGACTCGCTGAT+CGG 0.538209 7_2:+8121514 None:intergenic
TGTCATAGGCTTTGAGTGGT+GGG 0.543552 7_2:+8121739 None:intergenic
GGTTGTAGAGTACTAAGAAA+AGG 0.544678 7_2:-8122364 Msa1047320:CDS
GCTCATGGAATGTGGAGTTG+GGG 0.544869 7_2:-8121239 Msa1047320:CDS
AACCCCAACCTGCCTGAATG+TGG 0.546066 7_2:-8122694 Msa1047320:five_prime_UTR
AAAATATGGGAAAGAAAGAA+GGG 0.546091 7_2:+8122499 None:intergenic
TTCGGTTGAACCGGTTGAAG+AGG 0.550448 7_2:-8121544 Msa1047320:CDS
GGTCCCGAACATCTTCGTCC+AGG 0.558956 7_2:-8122214 Msa1047320:intron
AAGAAAACACTAACAAAATG+AGG 0.561350 7_2:-8120871 None:intergenic
TCAGTCGGTTTATTATGGTC+CGG 0.563725 7_2:-8121855 Msa1047320:CDS
TGGACGAAGATGTTCGGGAC+CGG 0.564250 7_2:+8122216 None:intergenic
TCTAGTACCTGAAAATCCAT+TGG 0.565036 7_2:-8122564 Msa1047320:five_prime_UTR
AAAGAGAGAGAGAAAGCCAA+TGG 0.572825 7_2:+8122548 None:intergenic
GGAAGCAGCTGCTAACGGGA+GGG 0.580906 7_2:-8121763 Msa1047320:CDS
AATCCAATTTACGGTTCAGT+CGG 0.582091 7_2:-8121870 Msa1047320:CDS
CTCAACAAAGAGTCAAGACT+CGG 0.582942 7_2:-8121668 Msa1047320:CDS
TGGTGTTGGCTCATGGAATG+TGG 0.583661 7_2:-8121247 Msa1047320:CDS
GGTTTCACGTGTTTATCATG+TGG 0.585512 7_2:-8121307 Msa1047320:CDS
GCATAAGACCTTGTTTACAA+TGG 0.593219 7_2:-8122324 Msa1047320:CDS
AAACCGAACCAAGCCAAACC+CGG 0.593382 7_2:+8121197 None:intergenic
TGACATCCGTCATGTGTCGA+AGG 0.595504 7_2:-8121721 Msa1047320:CDS
CTGGCAGCTATGTCAAGCCG+CGG 0.599587 7_2:-8121829 Msa1047320:CDS
TTTCCTCCTTCGACACATGA+CGG 0.600098 7_2:+8121715 None:intergenic
ACCGGTTCAACCGAACCGAT+CGG 0.600875 7_2:+8121552 None:intergenic
GCAGCTATGTCAAGCCGCGG+TGG 0.604170 7_2:-8121826 Msa1047320:CDS
TCAAGACTCGGTCGCGTAAG+CGG 0.609713 7_2:-8121656 Msa1047320:CDS
AGGGTTGTATTGAAGGATTG+TGG 0.614044 7_2:-8121267 Msa1047320:CDS
TGTGTCGAAGGAGGAAAACT+CGG 0.616290 7_2:-8121709 Msa1047320:CDS
AAAATGCGGATGAGTTGTAA+CGG 0.616520 7_2:-8122385 Msa1047320:CDS
GCCGATCACACCAATAACTT+CGG 0.617983 7_2:-8121784 Msa1047320:CDS
GTCGATTAGCCACCAGTCTG+AGG 0.618436 7_2:-8121493 Msa1047320:CDS
GTAGAATTTGGCGAGAAACA+CGG 0.619114 7_2:+8122270 None:intergenic
CAAGCCGAAGATACAAGAAG+AGG 0.623975 7_2:-8121622 Msa1047320:CDS
GTTGGACCGGAAAATGAAGC+CGG 0.627386 7_2:-8121394 Msa1047320:CDS
CATCCGTCATGTGTCGAAGG+AGG 0.629554 7_2:-8121718 Msa1047320:CDS
AAGAGTAGTAATGAGAACAA+GGG 0.634462 7_2:-8121597 Msa1047320:CDS
CAAGTTGTTACAACTTACAA+GGG 0.635758 7_2:-8120957 Msa1047320:three_prime_UTR
ACGCAACCGCCTCAGACTGG+TGG 0.636669 7_2:+8121484 None:intergenic
TTGAGTTAACTCGGTCGACG+CGG 0.651446 7_2:+8121686 None:intergenic
CTCATGAACCTTGTTAACGC+CGG 0.654635 7_2:-8122235 Msa1047320:CDS
TCCGGTTCAACTGAACCGAT+CGG 0.657777 7_2:-8121567 Msa1047320:CDS
TCGTTGTTGTACGAAGCATG+TGG 0.660850 7_2:-8121903 Msa1047320:CDS
CCGAACCGGTGAGAGTGGAG+AGG 0.672740 7_2:-8121367 Msa1047320:CDS
GATTAGCCACCAGTCTGAGG+CGG 0.698548 7_2:-8121490 Msa1047320:CDS
CGGATGTCATAGGCTTTGAG+TGG 0.702654 7_2:+8121735 None:intergenic
GGTTCCTGTGAAGAAAAGAA+GGG 0.756021 7_2:-8121286 Msa1047320:CDS
GAATTTGGCGAGAAACACGG+TGG 0.783343 7_2:+8122273 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATATGTAATTTTGTTA+AGG + chr7_2:8121481-8121500 None:intergenic 10.0%
!!! TTATATATGTAATTTTGTTA+AGG + chr7_2:8121481-8121500 None:intergenic 10.0%
!!! AAATCTTTTATTTTCTCAAT+TGG - chr7_2:8121176-8121195 Msa1047320:three_prime_UTR 15.0%
!!! AATCTTTTATTTTCTCAATT+GGG - chr7_2:8121177-8121196 Msa1047320:three_prime_UTR 15.0%
!!! GAAAATTTTCATTAAAAATG+CGG - chr7_2:8121205-8121224 Msa1047320:exon 15.0%
!! GTAAACAAAAAGTTATTAAA+AGG + chr7_2:8122534-8122553 None:intergenic 15.0%
!!! ATAACTTTTTGTTTACATTT+TGG - chr7_2:8122538-8122557 Msa1047320:five_prime_UTR 15.0%
!!! TAACTTTTTGTTTACATTTT+GGG - chr7_2:8122539-8122558 Msa1047320:five_prime_UTR 15.0%
!!! AAATCTTTTATTTTCTCAAT+TGG - chr7_2:8121176-8121195 Msa1047320:three_prime_UTR 15.0%
!!! AATCTTTTATTTTCTCAATT+GGG - chr7_2:8121177-8121196 Msa1047320:three_prime_UTR 15.0%
!!! GAAAATTTTCATTAAAAATG+CGG - chr7_2:8121205-8121224 Msa1047320:exon 15.0%
!! GTAAACAAAAAGTTATTAAA+AGG + chr7_2:8122534-8122553 None:intergenic 15.0%
!!! ATAACTTTTTGTTTACATTT+TGG - chr7_2:8122538-8122557 Msa1047320:five_prime_UTR 15.0%
!!! TAACTTTTTGTTTACATTTT+GGG - chr7_2:8122539-8122558 Msa1047320:five_prime_UTR 15.0%
!! ATTGTGTCTATGAAAAATAT+GGG + chr7_2:8121121-8121140 None:intergenic 20.0%
!! GAAAAATTAGACTTTGATAT+AGG + chr7_2:8121150-8121169 None:intergenic 20.0%
!!! ACAAATATATCAACTTTTGT+TGG + chr7_2:8121570-8121589 None:intergenic 20.0%
!! ATTAAAAACTAAACAAGAAC+TGG + chr7_2:8122502-8122521 None:intergenic 20.0%
!! ATTGTGTCTATGAAAAATAT+GGG + chr7_2:8121121-8121140 None:intergenic 20.0%
!! GAAAAATTAGACTTTGATAT+AGG + chr7_2:8121150-8121169 None:intergenic 20.0%
!!! ACAAATATATCAACTTTTGT+TGG + chr7_2:8121570-8121589 None:intergenic 20.0%
!! ATTAAAAACTAAACAAGAAC+TGG + chr7_2:8122502-8122521 None:intergenic 20.0%
! TTTATCTTGTTCCACAAATT+TGG - chr7_2:8120872-8120891 Msa1047320:three_prime_UTR 25.0%
! TGTGTTTACTATAAAAACCA+TGG + chr7_2:8120941-8120960 None:intergenic 25.0%
! AAAATATGGGAAAGAAAGAA+GGG + chr7_2:8121108-8121127 None:intergenic 25.0%
! AAAAATATGGGAAAGAAAGA+AGG + chr7_2:8121109-8121128 None:intergenic 25.0%
! GATTGTGTCTATGAAAAATA+TGG + chr7_2:8121122-8121141 None:intergenic 25.0%
! ATCTCTCTATAAGAAAAAGT+TGG - chr7_2:8121543-8121562 Msa1047320:CDS 25.0%
! TTTATCTTGTTCCACAAATT+TGG - chr7_2:8120872-8120891 Msa1047320:three_prime_UTR 25.0%
! TGTGTTTACTATAAAAACCA+TGG + chr7_2:8120941-8120960 None:intergenic 25.0%
! AAAATATGGGAAAGAAAGAA+GGG + chr7_2:8121108-8121127 None:intergenic 25.0%
! AAAAATATGGGAAAGAAAGA+AGG + chr7_2:8121109-8121128 None:intergenic 25.0%
! GATTGTGTCTATGAAAAATA+TGG + chr7_2:8121122-8121141 None:intergenic 25.0%
! ATCTCTCTATAAGAAAAAGT+TGG - chr7_2:8121543-8121562 Msa1047320:CDS 25.0%
GAAGTAAACAACCAAATTTG+TGG + chr7_2:8120886-8120905 None:intergenic 30.0%
!!! ATTTTCAGGTACTAGATTGT+GGG + chr7_2:8121036-8121055 None:intergenic 30.0%
! CTTTTGATCCATTGTAAACA+AGG + chr7_2:8121291-8121310 None:intergenic 30.0%
GTATTGCATGTTTGGATAAA+CGG + chr7_2:8121519-8121538 None:intergenic 30.0%
CGAATAGTGAATCCAATTTA+CGG - chr7_2:8121725-8121744 Msa1047320:CDS 30.0%
! TTTTCCTCTTCTTGTATCTT+CGG + chr7_2:8121989-8122008 None:intergenic 30.0%
AAAGAGTAGTAATGAGAACA+AGG - chr7_2:8122006-8122025 Msa1047320:intron 30.0%
AAGAGTAGTAATGAGAACAA+GGG - chr7_2:8122007-8122026 Msa1047320:intron 30.0%
! GATCTTATTTAGAGATGAAC+CGG - chr7_2:8122186-8122205 Msa1047320:intron 30.0%
ACTTTCTCATCTACATAGTT+TGG + chr7_2:8122606-8122625 None:intergenic 30.0%
! TGTAGATGAGAAAGTACATT+CGG - chr7_2:8122611-8122630 Msa1047320:five_prime_UTR 30.0%
TGTAAGTTGTAACAACTTGA+TGG + chr7_2:8122646-8122665 None:intergenic 30.0%
! TCAAGTTGTTACAACTTACA+AGG - chr7_2:8122646-8122665 Msa1047320:five_prime_UTR 30.0%
CAAGTTGTTACAACTTACAA+GGG - chr7_2:8122647-8122666 Msa1047320:five_prime_UTR 30.0%
GAAGTAAACAACCAAATTTG+TGG + chr7_2:8120886-8120905 None:intergenic 30.0%
!!! ATTTTCAGGTACTAGATTGT+GGG + chr7_2:8121036-8121055 None:intergenic 30.0%
! CTTTTGATCCATTGTAAACA+AGG + chr7_2:8121291-8121310 None:intergenic 30.0%
GTATTGCATGTTTGGATAAA+CGG + chr7_2:8121519-8121538 None:intergenic 30.0%
CGAATAGTGAATCCAATTTA+CGG - chr7_2:8121725-8121744 Msa1047320:CDS 30.0%
! TTTTCCTCTTCTTGTATCTT+CGG + chr7_2:8121989-8122008 None:intergenic 30.0%
AAAGAGTAGTAATGAGAACA+AGG - chr7_2:8122006-8122025 Msa1047320:intron 30.0%
AAGAGTAGTAATGAGAACAA+GGG - chr7_2:8122007-8122026 Msa1047320:intron 30.0%
! GATCTTATTTAGAGATGAAC+CGG - chr7_2:8122186-8122205 Msa1047320:intron 30.0%
ACTTTCTCATCTACATAGTT+TGG + chr7_2:8122606-8122625 None:intergenic 30.0%
! TGTAGATGAGAAAGTACATT+CGG - chr7_2:8122611-8122630 Msa1047320:five_prime_UTR 30.0%
TGTAAGTTGTAACAACTTGA+TGG + chr7_2:8122646-8122665 None:intergenic 30.0%
! TCAAGTTGTTACAACTTACA+AGG - chr7_2:8122646-8122665 Msa1047320:five_prime_UTR 30.0%
CAAGTTGTTACAACTTACAA+GGG - chr7_2:8122647-8122666 Msa1047320:five_prime_UTR 30.0%
!!! TTTTCAGGTACTAGATTGTG+GGG + chr7_2:8121035-8121054 None:intergenic 35.0%
!!! GATTTTCAGGTACTAGATTG+TGG + chr7_2:8121037-8121056 None:intergenic 35.0%
TCTAGTACCTGAAAATCCAT+TGG - chr7_2:8121040-8121059 Msa1047320:three_prime_UTR 35.0%
AAAATGCGGATGAGTTGTAA+CGG - chr7_2:8121219-8121238 Msa1047320:exon 35.0%
! GGTTGTAGAGTACTAAGAAA+AGG - chr7_2:8121240-8121259 Msa1047320:CDS 35.0%
! GCATAAGACCTTGTTTACAA+TGG - chr7_2:8121280-8121299 Msa1047320:CDS 35.0%
!!! AATGTCACTTTTTACGAACC+TGG + chr7_2:8121411-8121430 None:intergenic 35.0%
GCACTGAAACTACTGTAAAA+TGG + chr7_2:8121439-8121458 None:intergenic 35.0%
AGTTTCAGTGCATGTTTAGA+TGG - chr7_2:8121448-8121467 Msa1047320:CDS 35.0%
AGATGTGTGTATTGCATGTT+TGG + chr7_2:8121527-8121546 None:intergenic 35.0%
AATCCAATTTACGGTTCAGT+CGG - chr7_2:8121734-8121753 Msa1047320:CDS 35.0%
GACTCTTTGTTGAGTTAACT+CGG + chr7_2:8121930-8121949 None:intergenic 35.0%
ACATGATAAACACGTGAAAC+CGG + chr7_2:8122298-8122317 None:intergenic 35.0%
GAAAAGAAGGGTTGTATTGA+AGG - chr7_2:8122330-8122349 Msa1047320:CDS 35.0%
!!! TGGTTCAGTTTTGACTTAAG+CGG - chr7_2:8122430-8122449 Msa1047320:five_prime_UTR 35.0%
CTCTTGTCTCTTGTACAAAT+GGG + chr7_2:8122462-8122481 None:intergenic 35.0%
TCTCTTGTCTCTTGTACAAA+TGG + chr7_2:8122463-8122482 None:intergenic 35.0%
! TGCATATGATGATGCATCAA+TGG + chr7_2:8122674-8122693 None:intergenic 35.0%
!!! TTTTCAGGTACTAGATTGTG+GGG + chr7_2:8121035-8121054 None:intergenic 35.0%
!!! GATTTTCAGGTACTAGATTG+TGG + chr7_2:8121037-8121056 None:intergenic 35.0%
TCTAGTACCTGAAAATCCAT+TGG - chr7_2:8121040-8121059 Msa1047320:three_prime_UTR 35.0%
AAAATGCGGATGAGTTGTAA+CGG - chr7_2:8121219-8121238 Msa1047320:exon 35.0%
! GGTTGTAGAGTACTAAGAAA+AGG - chr7_2:8121240-8121259 Msa1047320:CDS 35.0%
! GCATAAGACCTTGTTTACAA+TGG - chr7_2:8121280-8121299 Msa1047320:CDS 35.0%
!!! AATGTCACTTTTTACGAACC+TGG + chr7_2:8121411-8121430 None:intergenic 35.0%
GCACTGAAACTACTGTAAAA+TGG + chr7_2:8121439-8121458 None:intergenic 35.0%
AGTTTCAGTGCATGTTTAGA+TGG - chr7_2:8121448-8121467 Msa1047320:CDS 35.0%
AGATGTGTGTATTGCATGTT+TGG + chr7_2:8121527-8121546 None:intergenic 35.0%
AATCCAATTTACGGTTCAGT+CGG - chr7_2:8121734-8121753 Msa1047320:CDS 35.0%
GACTCTTTGTTGAGTTAACT+CGG + chr7_2:8121930-8121949 None:intergenic 35.0%
ACATGATAAACACGTGAAAC+CGG + chr7_2:8122298-8122317 None:intergenic 35.0%
GAAAAGAAGGGTTGTATTGA+AGG - chr7_2:8122330-8122349 Msa1047320:CDS 35.0%
!!! TGGTTCAGTTTTGACTTAAG+CGG - chr7_2:8122430-8122449 Msa1047320:five_prime_UTR 35.0%
CTCTTGTCTCTTGTACAAAT+GGG + chr7_2:8122462-8122481 None:intergenic 35.0%
TCTCTTGTCTCTTGTACAAA+TGG + chr7_2:8122463-8122482 None:intergenic 35.0%
! TGCATATGATGATGCATCAA+TGG + chr7_2:8122674-8122693 None:intergenic 35.0%
! ACCATGGTTTTTCCACATTC+AGG + chr7_2:8120925-8120944 None:intergenic 40.0%
!! GAGAAAGCCAATGGATTTTC+AGG + chr7_2:8121050-8121069 None:intergenic 40.0%
AAAGAGAGAGAGAAAGCCAA+TGG + chr7_2:8121059-8121078 None:intergenic 40.0%
!! TGGCATTAGCTTGTGATTCA+GGG + chr7_2:8121314-8121333 None:intergenic 40.0%
GTAGAATTTGGCGAGAAACA+CGG + chr7_2:8121337-8121356 None:intergenic 40.0%
GTGTTTCTCGCCAAATTCTA+CGG - chr7_2:8121336-8121355 Msa1047320:CDS 40.0%
TCAGTGCATGTTTAGATGGA+CGG - chr7_2:8121452-8121471 Msa1047320:CDS 40.0%
AAACCGACTGAACCGTAAAT+TGG + chr7_2:8121740-8121759 None:intergenic 40.0%
! ACGGTTCAGTCGGTTTATTA+TGG - chr7_2:8121744-8121763 Msa1047320:CDS 40.0%
! TCAGTCGGTTTATTATGGTC+CGG - chr7_2:8121749-8121768 Msa1047320:CDS 40.0%
TCCGAAGTTATTGGTGTGAT+CGG + chr7_2:8121824-8121843 None:intergenic 40.0%
CTCAACAAAGAGTCAAGACT+CGG - chr7_2:8121936-8121955 Msa1047320:intron 40.0%
GAGAACAAGGGATTTGAATC+CGG - chr7_2:8122019-8122038 Msa1047320:intron 40.0%
ATTTAGAGATGAACCGGAGT+TGG - chr7_2:8122192-8122211 Msa1047320:intron 40.0%
GGTTTCACGTGTTTATCATG+TGG - chr7_2:8122297-8122316 Msa1047320:CDS 40.0%
TGGTTCCTGTGAAGAAAAGA+AGG - chr7_2:8122317-8122336 Msa1047320:CDS 40.0%
GGTTCCTGTGAAGAAAAGAA+GGG - chr7_2:8122318-8122337 Msa1047320:CDS 40.0%
! ACAACCCTTCTTTTCTTCAC+AGG + chr7_2:8122325-8122344 None:intergenic 40.0%
AGGGTTGTATTGAAGGATTG+TGG - chr7_2:8122337-8122356 Msa1047320:CDS 40.0%
GTATTGAAGGATTGTGGTGT+TGG - chr7_2:8122343-8122362 Msa1047320:CDS 40.0%
! ACCATGGTTTTTCCACATTC+AGG + chr7_2:8120925-8120944 None:intergenic 40.0%
!! GAGAAAGCCAATGGATTTTC+AGG + chr7_2:8121050-8121069 None:intergenic 40.0%
AAAGAGAGAGAGAAAGCCAA+TGG + chr7_2:8121059-8121078 None:intergenic 40.0%
!! TGGCATTAGCTTGTGATTCA+GGG + chr7_2:8121314-8121333 None:intergenic 40.0%
GTAGAATTTGGCGAGAAACA+CGG + chr7_2:8121337-8121356 None:intergenic 40.0%
GTGTTTCTCGCCAAATTCTA+CGG - chr7_2:8121336-8121355 Msa1047320:CDS 40.0%
TCAGTGCATGTTTAGATGGA+CGG - chr7_2:8121452-8121471 Msa1047320:CDS 40.0%
AAACCGACTGAACCGTAAAT+TGG + chr7_2:8121740-8121759 None:intergenic 40.0%
! ACGGTTCAGTCGGTTTATTA+TGG - chr7_2:8121744-8121763 Msa1047320:CDS 40.0%
! TCAGTCGGTTTATTATGGTC+CGG - chr7_2:8121749-8121768 Msa1047320:CDS 40.0%
TCCGAAGTTATTGGTGTGAT+CGG + chr7_2:8121824-8121843 None:intergenic 40.0%
CTCAACAAAGAGTCAAGACT+CGG - chr7_2:8121936-8121955 Msa1047320:intron 40.0%
GAGAACAAGGGATTTGAATC+CGG - chr7_2:8122019-8122038 Msa1047320:intron 40.0%
ATTTAGAGATGAACCGGAGT+TGG - chr7_2:8122192-8122211 Msa1047320:intron 40.0%
GGTTTCACGTGTTTATCATG+TGG - chr7_2:8122297-8122316 Msa1047320:CDS 40.0%
TGGTTCCTGTGAAGAAAAGA+AGG - chr7_2:8122317-8122336 Msa1047320:CDS 40.0%
GGTTCCTGTGAAGAAAAGAA+GGG - chr7_2:8122318-8122337 Msa1047320:CDS 40.0%
! ACAACCCTTCTTTTCTTCAC+AGG + chr7_2:8122325-8122344 None:intergenic 40.0%
AGGGTTGTATTGAAGGATTG+TGG - chr7_2:8122337-8122356 Msa1047320:CDS 40.0%
GTATTGAAGGATTGTGGTGT+TGG - chr7_2:8122343-8122362 Msa1047320:CDS 40.0%
TTTCCACATTCAGGCAGGTT+GGG + chr7_2:8120916-8120935 None:intergenic 45.0%
! TTTTCCACATTCAGGCAGGT+TGG + chr7_2:8120917-8120936 None:intergenic 45.0%
! TGGTTTTTCCACATTCAGGC+AGG + chr7_2:8120921-8120940 None:intergenic 45.0%
GCCTGAATGTGGAAAAACCA+TGG - chr7_2:8120921-8120940 Msa1047320:three_prime_UTR 45.0%
!! GTGGCATTAGCTTGTGATTC+AGG + chr7_2:8121315-8121334 None:intergenic 45.0%
CTCATGAACCTTGTTAACGC+CGG - chr7_2:8121369-8121388 Msa1047320:CDS 45.0%
TCGTTGTTGTACGAAGCATG+TGG - chr7_2:8121701-8121720 Msa1047320:CDS 45.0%
GTTTATTATGGTCCGGAAGC+TGG - chr7_2:8121756-8121775 Msa1047320:CDS 45.0%
!!! TTTTAAAACGGCTTCCACCG+CGG + chr7_2:8121795-8121814 None:intergenic 45.0%
GCCGATCACACCAATAACTT+CGG - chr7_2:8121820-8121839 Msa1047320:CDS 45.0%
!! TGTCATAGGCTTTGAGTGGT+GGG + chr7_2:8121868-8121887 None:intergenic 45.0%
!! ATGTCATAGGCTTTGAGTGG+TGG + chr7_2:8121869-8121888 None:intergenic 45.0%
TTTCCTCCTTCGACACATGA+CGG + chr7_2:8121892-8121911 None:intergenic 45.0%
TGTGTCGAAGGAGGAAAACT+CGG - chr7_2:8121895-8121914 Msa1047320:CDS 45.0%
CTCTTCTTGTATCTTCGGCT+TGG + chr7_2:8121984-8122003 None:intergenic 45.0%
CAAGCCGAAGATACAAGAAG+AGG - chr7_2:8121982-8122001 Msa1047320:intron 45.0%
TTCAACTGAACCGATCGGTT+CGG - chr7_2:8122042-8122061 Msa1047320:intron 45.0%
! TTCATTTTCCGGTCCAACTC+CGG + chr7_2:8122208-8122227 None:intergenic 45.0%
! TGGAGAGGAAAAGGTTGGTT+TGG - chr7_2:8122252-8122271 Msa1047320:CDS 45.0%
!! TTGGTTTGGAGCTGACTCTT+GGG - chr7_2:8122266-8122285 Msa1047320:CDS 45.0%
CTTCAATATCCGGCTTAGAC+CGG - chr7_2:8122388-8122407 Msa1047320:exon 45.0%
TTCAATATCCGGCTTAGACC+GGG - chr7_2:8122389-8122408 Msa1047320:exon 45.0%
TTTCCACATTCAGGCAGGTT+GGG + chr7_2:8120916-8120935 None:intergenic 45.0%
! TTTTCCACATTCAGGCAGGT+TGG + chr7_2:8120917-8120936 None:intergenic 45.0%
! TGGTTTTTCCACATTCAGGC+AGG + chr7_2:8120921-8120940 None:intergenic 45.0%
GCCTGAATGTGGAAAAACCA+TGG - chr7_2:8120921-8120940 Msa1047320:three_prime_UTR 45.0%
!! GTGGCATTAGCTTGTGATTC+AGG + chr7_2:8121315-8121334 None:intergenic 45.0%
CTCATGAACCTTGTTAACGC+CGG - chr7_2:8121369-8121388 Msa1047320:CDS 45.0%
TCGTTGTTGTACGAAGCATG+TGG - chr7_2:8121701-8121720 Msa1047320:CDS 45.0%
GTTTATTATGGTCCGGAAGC+TGG - chr7_2:8121756-8121775 Msa1047320:CDS 45.0%
!!! TTTTAAAACGGCTTCCACCG+CGG + chr7_2:8121795-8121814 None:intergenic 45.0%
GCCGATCACACCAATAACTT+CGG - chr7_2:8121820-8121839 Msa1047320:CDS 45.0%
!! TGTCATAGGCTTTGAGTGGT+GGG + chr7_2:8121868-8121887 None:intergenic 45.0%
!! ATGTCATAGGCTTTGAGTGG+TGG + chr7_2:8121869-8121888 None:intergenic 45.0%
TTTCCTCCTTCGACACATGA+CGG + chr7_2:8121892-8121911 None:intergenic 45.0%
TGTGTCGAAGGAGGAAAACT+CGG - chr7_2:8121895-8121914 Msa1047320:CDS 45.0%
CTCTTCTTGTATCTTCGGCT+TGG + chr7_2:8121984-8122003 None:intergenic 45.0%
CAAGCCGAAGATACAAGAAG+AGG - chr7_2:8121982-8122001 Msa1047320:intron 45.0%
TTCAACTGAACCGATCGGTT+CGG - chr7_2:8122042-8122061 Msa1047320:intron 45.0%
! TTCATTTTCCGGTCCAACTC+CGG + chr7_2:8122208-8122227 None:intergenic 45.0%
! TGGAGAGGAAAAGGTTGGTT+TGG - chr7_2:8122252-8122271 Msa1047320:CDS 45.0%
!! TTGGTTTGGAGCTGACTCTT+GGG - chr7_2:8122266-8122285 Msa1047320:CDS 45.0%
CTTCAATATCCGGCTTAGAC+CGG - chr7_2:8122388-8122407 Msa1047320:exon 45.0%
TTCAATATCCGGCTTAGACC+GGG - chr7_2:8122389-8122408 Msa1047320:exon 45.0%
TTCCACATTCAGGCAGGTTG+GGG + chr7_2:8120915-8120934 None:intergenic 50.0%
GAATTTGGCGAGAAACACGG+TGG + chr7_2:8121334-8121353 None:intergenic 50.0%
ACCAGCACGACCGTAGAATT+TGG + chr7_2:8121349-8121368 None:intergenic 50.0%
GAACCTGGACGAAGATGTTC+GGG + chr7_2:8121396-8121415 None:intergenic 50.0%
CGAACCTGGACGAAGATGTT+CGG + chr7_2:8121397-8121416 None:intergenic 50.0%
TTGACATAGCTGCCAGCTTC+CGG + chr7_2:8121771-8121790 None:intergenic 50.0%
!! GCGGTGGAAGCCGTTTTAAA+AGG - chr7_2:8121794-8121813 Msa1047320:CDS 50.0%
!! GATCGGCGCGCCTTTTAAAA+CGG + chr7_2:8121807-8121826 None:intergenic 50.0%
GCAGCTGCTTCCGAAGTTAT+TGG + chr7_2:8121833-8121852 None:intergenic 50.0%
ACTTCGGAAGCAGCTGCTAA+CGG - chr7_2:8121836-8121855 Msa1047320:CDS 50.0%
!! CGGATGTCATAGGCTTTGAG+TGG + chr7_2:8121872-8121891 None:intergenic 50.0%
!! CGACACATGACGGATGTCAT+AGG + chr7_2:8121882-8121901 None:intergenic 50.0%
TGACATCCGTCATGTGTCGA+AGG - chr7_2:8121883-8121902 Msa1047320:CDS 50.0%
TTGAGTTAACTCGGTCGACG+CGG + chr7_2:8121921-8121940 None:intergenic 50.0%
TCCGGTTCAACTGAACCGAT+CGG - chr7_2:8122037-8122056 Msa1047320:intron 50.0%
! ACCGATCGGTTCAGTTGAAC+CGG + chr7_2:8122041-8122060 None:intergenic 50.0%
TTCGGTTGAACCGGTTGAAG+AGG - chr7_2:8122060-8122079 Msa1047320:intron 50.0%
CGGTTCATCACCTCTTCAAC+CGG + chr7_2:8122073-8122092 None:intergenic 50.0%
ACGACTCATGACTCGCTGAT+CGG + chr7_2:8122093-8122112 None:intergenic 50.0%
GTTGGACCGGAAAATGAAGC+CGG - chr7_2:8122210-8122229 Msa1047320:intron 50.0%
!! GGTCAACCGGCTTCATTTTC+CGG + chr7_2:8122219-8122238 None:intergenic 50.0%
! CTTTTCCTCTCCACTCTCAC+CGG + chr7_2:8122245-8122264 None:intergenic 50.0%
GAGAGTGGAGAGGAAAAGGT+TGG - chr7_2:8122247-8122266 Msa1047320:CDS 50.0%
!! GTTGGTTTGGAGCTGACTCT+TGG - chr7_2:8122265-8122284 Msa1047320:CDS 50.0%
!! AGGATTGTGGTGTTGGCTCA+TGG - chr7_2:8122350-8122369 Msa1047320:CDS 50.0%
!! TGGTGTTGGCTCATGGAATG+TGG - chr7_2:8122357-8122376 Msa1047320:CDS 50.0%
TGGCTCATGGAATGTGGAGT+TGG - chr7_2:8122363-8122382 Msa1047320:CDS 50.0%
GGCTCATGGAATGTGGAGTT+GGG - chr7_2:8122364-8122383 Msa1047320:CDS 50.0%
GCTCATGGAATGTGGAGTTG+GGG - chr7_2:8122365-8122384 Msa1047320:CDS 50.0%
GGAGTTGGGGCTTCAATATC+CGG - chr7_2:8122378-8122397 Msa1047320:CDS 50.0%
AAACCGAACCAAGCCAAACC+CGG + chr7_2:8122410-8122429 None:intergenic 50.0%
!!! GGTTTGGCTTGGTTCGGTTT+TGG - chr7_2:8122410-8122429 Msa1047320:five_prime_UTR 50.0%
TTCCACATTCAGGCAGGTTG+GGG + chr7_2:8120915-8120934 None:intergenic 50.0%
GAATTTGGCGAGAAACACGG+TGG + chr7_2:8121334-8121353 None:intergenic 50.0%
ACCAGCACGACCGTAGAATT+TGG + chr7_2:8121349-8121368 None:intergenic 50.0%
GAACCTGGACGAAGATGTTC+GGG + chr7_2:8121396-8121415 None:intergenic 50.0%
CGAACCTGGACGAAGATGTT+CGG + chr7_2:8121397-8121416 None:intergenic 50.0%
TTGACATAGCTGCCAGCTTC+CGG + chr7_2:8121771-8121790 None:intergenic 50.0%
!! GCGGTGGAAGCCGTTTTAAA+AGG - chr7_2:8121794-8121813 Msa1047320:CDS 50.0%
!! GATCGGCGCGCCTTTTAAAA+CGG + chr7_2:8121807-8121826 None:intergenic 50.0%
GCAGCTGCTTCCGAAGTTAT+TGG + chr7_2:8121833-8121852 None:intergenic 50.0%
ACTTCGGAAGCAGCTGCTAA+CGG - chr7_2:8121836-8121855 Msa1047320:CDS 50.0%
!! CGGATGTCATAGGCTTTGAG+TGG + chr7_2:8121872-8121891 None:intergenic 50.0%
!! CGACACATGACGGATGTCAT+AGG + chr7_2:8121882-8121901 None:intergenic 50.0%
TGACATCCGTCATGTGTCGA+AGG - chr7_2:8121883-8121902 Msa1047320:CDS 50.0%
TTGAGTTAACTCGGTCGACG+CGG + chr7_2:8121921-8121940 None:intergenic 50.0%
TCCGGTTCAACTGAACCGAT+CGG - chr7_2:8122037-8122056 Msa1047320:intron 50.0%
! ACCGATCGGTTCAGTTGAAC+CGG + chr7_2:8122041-8122060 None:intergenic 50.0%
TTCGGTTGAACCGGTTGAAG+AGG - chr7_2:8122060-8122079 Msa1047320:intron 50.0%
CGGTTCATCACCTCTTCAAC+CGG + chr7_2:8122073-8122092 None:intergenic 50.0%
ACGACTCATGACTCGCTGAT+CGG + chr7_2:8122093-8122112 None:intergenic 50.0%
GTTGGACCGGAAAATGAAGC+CGG - chr7_2:8122210-8122229 Msa1047320:intron 50.0%
!! GGTCAACCGGCTTCATTTTC+CGG + chr7_2:8122219-8122238 None:intergenic 50.0%
! CTTTTCCTCTCCACTCTCAC+CGG + chr7_2:8122245-8122264 None:intergenic 50.0%
GAGAGTGGAGAGGAAAAGGT+TGG - chr7_2:8122247-8122266 Msa1047320:CDS 50.0%
!! GTTGGTTTGGAGCTGACTCT+TGG - chr7_2:8122265-8122284 Msa1047320:CDS 50.0%
!! AGGATTGTGGTGTTGGCTCA+TGG - chr7_2:8122350-8122369 Msa1047320:CDS 50.0%
!! TGGTGTTGGCTCATGGAATG+TGG - chr7_2:8122357-8122376 Msa1047320:CDS 50.0%
TGGCTCATGGAATGTGGAGT+TGG - chr7_2:8122363-8122382 Msa1047320:CDS 50.0%
GGCTCATGGAATGTGGAGTT+GGG - chr7_2:8122364-8122383 Msa1047320:CDS 50.0%
GCTCATGGAATGTGGAGTTG+GGG - chr7_2:8122365-8122384 Msa1047320:CDS 50.0%
GGAGTTGGGGCTTCAATATC+CGG - chr7_2:8122378-8122397 Msa1047320:CDS 50.0%
AAACCGAACCAAGCCAAACC+CGG + chr7_2:8122410-8122429 None:intergenic 50.0%
!!! GGTTTGGCTTGGTTCGGTTT+TGG - chr7_2:8122410-8122429 Msa1047320:five_prime_UTR 50.0%
AACCCCAACCTGCCTGAATG+TGG - chr7_2:8120910-8120929 Msa1047320:three_prime_UTR 55.0%
GCCAAATTCTACGGTCGTGC+TGG - chr7_2:8121345-8121364 Msa1047320:CDS 55.0%
TGGACGAAGATGTTCGGGAC+CGG + chr7_2:8121391-8121410 None:intergenic 55.0%
CTTCGGAAGCAGCTGCTAAC+GGG - chr7_2:8121837-8121856 Msa1047320:CDS 55.0%
CATCCGTCATGTGTCGAAGG+AGG - chr7_2:8121886-8121905 Msa1047320:CDS 55.0%
! TCAAGACTCGGTCGCGTAAG+CGG - chr7_2:8121948-8121967 Msa1047320:intron 55.0%
!! ACCGATCGGTTCGGTTGAAC+CGG - chr7_2:8122051-8122070 Msa1047320:intron 55.0%
! ACCGGTTCAACCGAACCGAT+CGG + chr7_2:8122055-8122074 None:intergenic 55.0%
! GTCGATTAGCCACCAGTCTG+AGG - chr7_2:8122111-8122130 Msa1047320:intron 55.0%
! GATTAGCCACCAGTCTGAGG+CGG - chr7_2:8122114-8122133 Msa1047320:intron 55.0%
GAGATGAACCGGAGTTGGAC+CGG - chr7_2:8122197-8122216 Msa1047320:intron 55.0%
ATGAAGCCGGTTGACCGAAC+CGG - chr7_2:8122223-8122242 Msa1047320:CDS 55.0%
CGGTGAGAGTGGAGAGGAAA+AGG - chr7_2:8122243-8122262 Msa1047320:CDS 55.0%
! GCTGACTCTTGGGCTTGAAC+CGG - chr7_2:8122276-8122295 Msa1047320:CDS 55.0%
TATCCGGCTTAGACCGGGTT+TGG - chr7_2:8122394-8122413 Msa1047320:exon 55.0%
AAGCCAAACCCGGTCTAAGC+CGG + chr7_2:8122400-8122419 None:intergenic 55.0%
!! AGACCGGGTTTGGCTTGGTT+CGG - chr7_2:8122404-8122423 Msa1047320:exon 55.0%
AACCCCAACCTGCCTGAATG+TGG - chr7_2:8120910-8120929 Msa1047320:three_prime_UTR 55.0%
GCCAAATTCTACGGTCGTGC+TGG - chr7_2:8121345-8121364 Msa1047320:CDS 55.0%
TGGACGAAGATGTTCGGGAC+CGG + chr7_2:8121391-8121410 None:intergenic 55.0%
CTTCGGAAGCAGCTGCTAAC+GGG - chr7_2:8121837-8121856 Msa1047320:CDS 55.0%
CATCCGTCATGTGTCGAAGG+AGG - chr7_2:8121886-8121905 Msa1047320:CDS 55.0%
! TCAAGACTCGGTCGCGTAAG+CGG - chr7_2:8121948-8121967 Msa1047320:intron 55.0%
!! ACCGATCGGTTCGGTTGAAC+CGG - chr7_2:8122051-8122070 Msa1047320:intron 55.0%
! ACCGGTTCAACCGAACCGAT+CGG + chr7_2:8122055-8122074 None:intergenic 55.0%
! GTCGATTAGCCACCAGTCTG+AGG - chr7_2:8122111-8122130 Msa1047320:intron 55.0%
! GATTAGCCACCAGTCTGAGG+CGG - chr7_2:8122114-8122133 Msa1047320:intron 55.0%
GAGATGAACCGGAGTTGGAC+CGG - chr7_2:8122197-8122216 Msa1047320:intron 55.0%
ATGAAGCCGGTTGACCGAAC+CGG - chr7_2:8122223-8122242 Msa1047320:CDS 55.0%
CGGTGAGAGTGGAGAGGAAA+AGG - chr7_2:8122243-8122262 Msa1047320:CDS 55.0%
! GCTGACTCTTGGGCTTGAAC+CGG - chr7_2:8122276-8122295 Msa1047320:CDS 55.0%
TATCCGGCTTAGACCGGGTT+TGG - chr7_2:8122394-8122413 Msa1047320:exon 55.0%
AAGCCAAACCCGGTCTAAGC+CGG + chr7_2:8122400-8122419 None:intergenic 55.0%
!! AGACCGGGTTTGGCTTGGTT+CGG - chr7_2:8122404-8122423 Msa1047320:exon 55.0%
GTTCGGGACCGGCGTTAACA+AGG + chr7_2:8121380-8121399 None:intergenic 60.0%
GGTCCCGAACATCTTCGTCC+AGG - chr7_2:8121390-8121409 Msa1047320:CDS 60.0%
CTGGCAGCTATGTCAAGCCG+CGG - chr7_2:8121775-8121794 Msa1047320:CDS 60.0%
GGAAGCAGCTGCTAACGGGA+GGG - chr7_2:8121841-8121860 Msa1047320:CDS 60.0%
GAAGCAGCTGCTAACGGGAG+GGG - chr7_2:8121842-8121861 Msa1047320:CDS 60.0%
!! CTCTCACCGGTTCGGTCAAC+CGG + chr7_2:8122232-8122251 None:intergenic 60.0%
GTTGACCGAACCGGTGAGAG+TGG - chr7_2:8122232-8122251 Msa1047320:CDS 60.0%
! CCTCTCCACTCTCACCGGTT+CGG + chr7_2:8122240-8122259 None:intergenic 60.0%
GGCTTAGACCGGGTTTGGCT+TGG - chr7_2:8122399-8122418 Msa1047320:exon 60.0%
GTTCGGGACCGGCGTTAACA+AGG + chr7_2:8121380-8121399 None:intergenic 60.0%
GGTCCCGAACATCTTCGTCC+AGG - chr7_2:8121390-8121409 Msa1047320:CDS 60.0%
CTGGCAGCTATGTCAAGCCG+CGG - chr7_2:8121775-8121794 Msa1047320:CDS 60.0%
GGAAGCAGCTGCTAACGGGA+GGG - chr7_2:8121841-8121860 Msa1047320:CDS 60.0%
GAAGCAGCTGCTAACGGGAG+GGG - chr7_2:8121842-8121861 Msa1047320:CDS 60.0%
!! CTCTCACCGGTTCGGTCAAC+CGG + chr7_2:8122232-8122251 None:intergenic 60.0%
GTTGACCGAACCGGTGAGAG+TGG - chr7_2:8122232-8122251 Msa1047320:CDS 60.0%
! CCTCTCCACTCTCACCGGTT+CGG + chr7_2:8122240-8122259 None:intergenic 60.0%
GGCTTAGACCGGGTTTGGCT+TGG - chr7_2:8122399-8122418 Msa1047320:exon 60.0%
GCAGCTATGTCAAGCCGCGG+TGG - chr7_2:8121778-8121797 Msa1047320:CDS 65.0%
CGGAAGCAGCTGCTAACGGG+AGG - chr7_2:8121840-8121859 Msa1047320:CDS 65.0%
ACGCAACCGCCTCAGACTGG+TGG + chr7_2:8122123-8122142 None:intergenic 65.0%
CCAACGCAACCGCCTCAGAC+TGG + chr7_2:8122126-8122145 None:intergenic 65.0%
! CCAGTCTGAGGCGGTTGCGT+TGG - chr7_2:8122123-8122142 Msa1047320:intron 65.0%
! GTCTGAGGCGGTTGCGTTGG+TGG - chr7_2:8122126-8122145 Msa1047320:intron 65.0%
! GAGGCGGTTGCGTTGGTGGA+TGG - chr7_2:8122130-8122149 Msa1047320:intron 65.0%
CCGAACCGGTGAGAGTGGAG+AGG - chr7_2:8122237-8122256 Msa1047320:CDS 65.0%
GCAGCTATGTCAAGCCGCGG+TGG - chr7_2:8121778-8121797 Msa1047320:CDS 65.0%
CGGAAGCAGCTGCTAACGGG+AGG - chr7_2:8121840-8121859 Msa1047320:CDS 65.0%
ACGCAACCGCCTCAGACTGG+TGG + chr7_2:8122123-8122142 None:intergenic 65.0%
CCAACGCAACCGCCTCAGAC+TGG + chr7_2:8122126-8122145 None:intergenic 65.0%
! CCAGTCTGAGGCGGTTGCGT+TGG - chr7_2:8122123-8122142 Msa1047320:intron 65.0%
! GTCTGAGGCGGTTGCGTTGG+TGG - chr7_2:8122126-8122145 Msa1047320:intron 65.0%
! GAGGCGGTTGCGTTGGTGGA+TGG - chr7_2:8122130-8122149 Msa1047320:intron 65.0%
CCGAACCGGTGAGAGTGGAG+AGG - chr7_2:8122237-8122256 Msa1047320:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 8120872 8122754 8120872 ID=Msa1047320;Name=Msa1047320
chr7_2 mRNA 8120872 8122754 8120872 ID=Msa1047320-mRNA-1;Parent=Msa1047320;Name=Msa1047320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=350|1|1|1|1|1|2|349|301
chr7_2 exon 8120872 8121936 8120872 ID=Msa1047320-mRNA-1:exon:2128;Parent=Msa1047320-mRNA-1
chr7_2 exon 8122215 8122754 8122215 ID=Msa1047320-mRNA-1:exon:2127;Parent=Msa1047320-mRNA-1
chr7_2 five_prime_UTR 8122405 8122754 8122405 ID=Msa1047320-mRNA-1:five_prime_utr;Parent=Msa1047320-mRNA-1
chr7_2 CDS 8122215 8122404 8122215 ID=Msa1047320-mRNA-1:cds;Parent=Msa1047320-mRNA-1
chr7_2 CDS 8121221 8121936 8121221 ID=Msa1047320-mRNA-1:cds;Parent=Msa1047320-mRNA-1
chr7_2 three_prime_UTR 8120872 8121220 8120872 ID=Msa1047320-mRNA-1:three_prime_utr;Parent=Msa1047320-mRNA-1
Gene Sequence

>Msa1047320

ATGCGGATGAGTTGTAACGGTTGTAGAGTACTAAGAAAAGGTTGCAGTGAAAACTGTAGCATAAGACCTTGTTTACAATGGATCAAAAGCCCTGAATCACAAGCTAATGCCACCGTGTTTCTCGCCAAATTCTACGGTCGTGCTGGTCTCATGAACCTTGTTAACGCCGGTCCCGAACATCTTCGTCCAGCAATTTTTCGTTCGTTGTTGTACGAAGCATGTGGTCGAATAGTGAATCCAATTTACGGTTCAGTCGGTTTATTATGGTCCGGAAGCTGGCAGCTATGTCAAGCCGCGGTGGAAGCCGTTTTAAAAGGCGCGCCGATCACACCAATAACTTCGGAAGCAGCTGCTAACGGGAGGGGCCCACCACTCAAAGCCTATGACATCCGTCATGTGTCGAAGGAGGAAAACTCGGCCGCGTCGACCGAGTTAACTCAACAAAGAGTCAAGACTCGGTCGCGTAAGCGGTCGAGTTTAGCCAAGCCGAAGATACAAGAAGAGGAAAAGAGTAGTAATGAGAACAAGGGATTTGAATCCGGTTCAACTGAACCGATCGGTTCGGTTGAACCGGTTGAAGAGGTGATGAACCGATCAGCGAGTCATGAGTCGTCGATTAGCCACCAGTCTGAGGCGGTTGCGTTGGTGGATGGAGAGAGTAAAGATAGTGAGAGTGAAACTTCGATGATCTTATTTAGAGATGAACCGGAGTTGGACCGGAAAATGAAGCCGGTTGACCGAACCGGTGAGAGTGGAGAGGAAAAGGTTGGTTTGGAGCTGACTCTTGGGCTTGAACCGGTTTCACGTGTTTATCATGTGGTTCCTGTGAAGAAAAGAAGGGTTGTATTGAAGGATTGTGGTGTTGGCTCATGGAATGTGGAGTTGGGGCTTCAATATCCGGCTTAG
Protein sequence

>Msa1047320

MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKEENSAASTELTQQRVKTRSRKRSSLAKPKIQEEEKSSNENKGFESGSTEPIGSVEPVEEVMNRSASHESSISHQSEAVALVDGESKDSESETSMILFRDEPELDRKMKPVDRTGESGEEKVGLELTLGLEPVSRVYHVVPVKKRRVVLKDCGVGSWNVELGLQYPA*