AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1348330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348330 MtrunA17_Chr3g0140351 96.908 841 6 4 1 827 1 835 0.0 1668
Msa1348330 MtrunA17_Chr2g0331131 79.762 840 144 6 8 827 3 836 0.0 1398
Msa1348330 MtrunA17_Chr8g0340411 78.954 841 147 7 7 827 2 832 0.0 1387
Msa1348330 MtrunA17_Chr2g0292391 65.000 840 254 12 16 827 9 836 0.0 1119
Msa1348330 MtrunA17_Chr4g0028991 64.217 830 272 8 16 827 24 846 0.0 1091
Msa1348330 MtrunA17_Chr2g0326731 60.613 848 301 11 2 827 3 839 0.0 1024
Msa1348330 MtrunA17_Chr2g0331581 21.920 625 376 23 21 576 143 724 1.96e-21 100
Msa1348330 MtrunA17_Chr2g0322731 24.257 404 233 16 204 577 345 705 5.63e-16 82.4
Msa1348330 MtrunA17_Chr8g0350321 22.607 491 291 18 204 664 375 806 1.08e-12 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348330 AT4G32880.1 78.058 834 150 11 16 827 11 833 0.0 1338
Msa1348330 AT1G52150.1 76.887 848 162 9 2 827 1 836 0.0 1336
Msa1348330 AT1G52150.2 76.887 848 163 9 2 827 1 837 0.0 1336
Msa1348330 AT1G52150.3 76.250 800 156 9 2 779 1 788 0.0 1238
Msa1348330 AT2G34710.1 63.298 861 273 11 1 827 1 852 0.0 1073
Msa1348330 AT1G30490.1 61.249 849 282 10 9 827 10 841 0.0 1047
Msa1348330 AT5G60690.1 61.705 833 283 9 18 827 23 842 0.0 1033
Msa1348330 AT5G32670.1 63.514 74 27 0 284 357 37 110 1.92e-23 99.0
Msa1348330 AT4G25530.1 22.449 637 355 26 23 577 46 625 3.77e-15 80.1
Msa1348330 AT3G03260.1 22.822 482 251 21 15 400 19 475 4.83e-13 73.6
Msa1348330 AT3G03260.2 22.822 482 251 21 15 400 19 475 1.01e-12 72.0

Find 237 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATCTTATCTATGGTATT+TGG 0.142289 tig0010302:-22101 Msa1348330:three_prime_UTR
ACTATACCTGCTGCATTATC+TGG 0.179885 tig0010302:+22493 None:intergenic
GGTTCTGTGTTGCTCTTTAA+AGG 0.201093 tig0010302:-22816 Msa1348330:intron
TTTAGGCTTTACGTCATTTA+AGG 0.223191 tig0010302:-24967 Msa1348330:intron
TATAAATATACCTTCTGTTC+TGG 0.245843 tig0010302:+27429 None:intergenic
CGAGTAAGCGTTTGTGCTTC+AGG 0.246753 tig0010302:+23046 None:intergenic
TGGCACCAGGTCGCGACTTC+TGG 0.250399 tig0010302:-25559 Msa1348330:CDS
TGGAAGAAGGTAGCTTAATT+AGG 0.254921 tig0010302:-27658 Msa1348330:five_prime_UTR
CAAAGCTTCCATGTTGTTAC+AGG 0.257668 tig0010302:-24593 Msa1348330:intron
ATGATCAACAATATGAATTA+TGG 0.263716 tig0010302:+25257 None:intergenic
CAACACAAAATAATCTTCTT+TGG 0.265485 tig0010302:+27695 None:intergenic
GCACTTTCCCCTTCGCGTTT+TGG 0.273753 tig0010302:-23103 Msa1348330:CDS
CTAACCTTTAATCTTATCTA+TGG 0.279952 tig0010302:-22108 Msa1348330:three_prime_UTR
GCTACATGGACCAGCTTTAA+TGG 0.282319 tig0010302:+24148 None:intergenic
GGGGCCCGAGCAGGAGCTTT+TGG 0.283710 tig0010302:-24119 Msa1348330:CDS
CTGCGAAGAGAAGTTGGTTT+TGG 0.293313 tig0010302:+27518 None:intergenic
ACAGCTCTCTCATAAGTTAT+TGG 0.294717 tig0010302:+22246 None:intergenic
AATACCATAGATAAGATTAA+AGG 0.305411 tig0010302:+22104 None:intergenic
TGTCTAGTAGATTAAAAGAT+AGG 0.320395 tig0010302:-22154 Msa1348330:exon
GCTGCGCTACACATCACTTT+TGG 0.327871 tig0010302:-25534 Msa1348330:CDS
CTAAAATACTTACTTGTAAG+AGG 0.330219 tig0010302:+23837 None:intergenic
TAACCTTCATCCCGGGCATT+TGG 0.334513 tig0010302:+26542 None:intergenic
AGCAATGAACAAACTGCTTA+TGG 0.337413 tig0010302:-27253 Msa1348330:CDS
TCTGTTTCATGTTCATCAAT+TGG 0.338860 tig0010302:-22182 Msa1348330:CDS
ACGAAAACCAGAAGGCAAAA+TGG 0.343351 tig0010302:+23482 None:intergenic
AACCTAAACAGATCAAAGTT+TGG 0.353061 tig0010302:-27454 Msa1348330:CDS
CCAAGGGATGCAAGCCCTGC+TGG 0.354906 tig0010302:-26811 Msa1348330:CDS
GCACTTGAGGTTGGAACCAC+TGG 0.370337 tig0010302:-23289 Msa1348330:CDS
TTATAGATCATTATACTATA+CGG 0.372198 tig0010302:+27870 None:intergenic
TAAAGTGGGCGCAAAACTTC+AGG 0.378668 tig0010302:+25122 None:intergenic
AACCAAACTTTGATCTGTTT+AGG 0.378767 tig0010302:+27452 None:intergenic
AATGTTATGTCCACAGGAAA+TGG 0.379586 tig0010302:-25752 Msa1348330:CDS
TCAAGTGCTTCCACTTGCTC+TGG 0.381079 tig0010302:+27560 None:intergenic
TTGAGAACATGGGCTACTAT+AGG 0.388073 tig0010302:-23889 Msa1348330:CDS
AGGAAGTTAATTACCCTTGC+AGG 0.390715 tig0010302:+25921 None:intergenic
AGGATGATGGCAGTGAGTTC+AGG 0.392334 tig0010302:-27638 Msa1348330:CDS
CCAGCAGGGCTTGCATCCCT+TGG 0.392669 tig0010302:+26811 None:intergenic
CAGGCACGTGCAGCCACTCC+AGG 0.395142 tig0010302:+25963 None:intergenic
CGACCTGGTGCCAGAGTTGT+TGG 0.396680 tig0010302:+25569 None:intergenic
AAAGCTCCTGCTCGGGCCCC+TGG 0.404062 tig0010302:+24122 None:intergenic
TGAGAACATGGGCTACTATA+GGG 0.407729 tig0010302:-23888 Msa1348330:CDS
CTTGCTTCTGCACTTGAGGT+TGG 0.412761 tig0010302:-23298 Msa1348330:CDS
GGGTGACAATTCAGGTCATT+CGG 0.414286 tig0010302:-23254 Msa1348330:CDS
CAGGGTTTCATGTGTATTCA+AGG 0.417991 tig0010302:-22297 Msa1348330:CDS
GTTGAGTGGGTCCAAATGCC+CGG 0.418997 tig0010302:-26553 Msa1348330:CDS
TCAGAGAAAGATGCATCAAT+TGG 0.421642 tig0010302:+23513 None:intergenic
GCTGGTCCATGTAGCTTGCC+AGG 0.423708 tig0010302:-24140 Msa1348330:CDS
CTTCCCCATCCTGTCACACT+TGG 0.428131 tig0010302:+24920 None:intergenic
GAATATTGTGTGTGTGCAAT+AGG 0.428843 tig0010302:+27781 None:intergenic
GTGTTGAGTTGGGTTGGATT+TGG 0.430072 tig0010302:-27678 Msa1348330:five_prime_UTR
TTTACGTTTGCGAATCAAGC+TGG 0.434930 tig0010302:-22615 Msa1348330:CDS
GGTGACAATTCAGGTCATTC+GGG 0.437203 tig0010302:-23253 Msa1348330:CDS
CGAAAACCAGAAGGCAAAAT+GGG 0.440093 tig0010302:+23483 None:intergenic
GCACGTGCCTGCGGCCTCGT+GGG 0.440499 tig0010302:-25951 Msa1348330:CDS
AATCGATACTTAAATCCCTT+TGG 0.442177 tig0010302:-22853 Msa1348330:CDS
AGCTTGCCAGGGGCCCGAGC+AGG 0.444554 tig0010302:-24128 Msa1348330:CDS
GTTTGTGCTTCAGGAGTTCC+AGG 0.444785 tig0010302:+23055 None:intergenic
CGATCTTGCTTCTGCACTTG+AGG 0.446890 tig0010302:-23302 Msa1348330:CDS
GGTGGATCTGTAACAGCTAT+AGG 0.449783 tig0010302:-23024 Msa1348330:intron
ACCACCAAAAGCTCCTGCTC+GGG 0.452836 tig0010302:+24115 None:intergenic
CATTGAATTGCTTTACATGC+AGG 0.453193 tig0010302:-25723 Msa1348330:intron
ACCATGAGAGCCTATCTTTG+AGG 0.453750 tig0010302:+25804 None:intergenic
CTGCGATATTATCTTGAAGA+TGG 0.455006 tig0010302:+23182 None:intergenic
CTGTAACAACATGGAAGCTT+TGG 0.455633 tig0010302:+24594 None:intergenic
CGGGCCCCTGGCAAGCTACA+TGG 0.457289 tig0010302:+24134 None:intergenic
AGTTTGTCTGTGACAATTGT+TGG 0.459139 tig0010302:+27844 None:intergenic
GCAGGGCTTGCATCCCTTGG+TGG 0.461144 tig0010302:+26814 None:intergenic
GACCACCAAAAGCTCCTGCT+CGG 0.462737 tig0010302:+24114 None:intergenic
GCTTGCTCAGAGAACAACTA+TGG 0.463260 tig0010302:-25084 Msa1348330:CDS
GGTTATCAAGCTTGAGAACA+TGG 0.465661 tig0010302:-23900 Msa1348330:CDS
CTATACCTGCTGCATTATCT+GGG 0.466306 tig0010302:+22494 None:intergenic
GCAATTTCTCATGGTTCCCC+TGG 0.467349 tig0010302:-25981 Msa1348330:CDS
TTGCTGAAATCCTCAAAGAT+AGG 0.468317 tig0010302:-25814 Msa1348330:CDS
GATTCAACGAAGCTGTCAAC+GGG 0.469615 tig0010302:-24765 Msa1348330:CDS
TTCATCACCTAGCAAGATGA+TGG 0.470764 tig0010302:-24677 Msa1348330:CDS
GATGGGCTTCAAATGCAAAC+TGG 0.472343 tig0010302:+23200 None:intergenic
GTTGGGTTGGATTTGGAAGA+AGG 0.472578 tig0010302:-27671 Msa1348330:five_prime_UTR
CATCTTCCTCAGCTTTGTAG+TGG 0.473433 tig0010302:-23582 Msa1348330:intron
GAGTTTCTATCAAAGGCTAC+TGG 0.476434 tig0010302:-26583 Msa1348330:CDS
TTCTCATGGTTCCCCTGGAG+TGG 0.477241 tig0010302:-25976 Msa1348330:CDS
CTCAGCCAAGTGTGACAGGA+TGG 0.477876 tig0010302:-24925 Msa1348330:CDS
TGCACGTGCCTGCGGCCTCG+TGG 0.486826 tig0010302:-25952 Msa1348330:CDS
TAGCCTGGTCCGGATTCCAT+TGG 0.487508 tig0010302:-26011 Msa1348330:CDS
TGGTATTTGTTTATCCAGCA+TGG 0.488354 tig0010302:-22274 Msa1348330:CDS
GTTTCTCAGCCAAGTGTGAC+AGG 0.488578 tig0010302:-24929 Msa1348330:CDS
GGTTCAATATGAGAGAGAAT+AGG 0.490102 tig0010302:+27473 None:intergenic
CAGCCAAGTGTGACAGGATG+GGG 0.491303 tig0010302:-24923 Msa1348330:CDS
GCTCTAACAAAATGCGGCAC+TGG 0.492687 tig0010302:+25330 None:intergenic
AGGAAGCTTAAAAGAGATGT+TGG 0.492851 tig0010302:+27817 None:intergenic
GGTCCAAATGCCCGGGATGA+AGG 0.494227 tig0010302:-26545 Msa1348330:intron
GCGGGAACACAGATCAGAAT+GGG 0.495304 tig0010302:-24204 Msa1348330:CDS
GGTATTTGTTTATCCAGCAT+GGG 0.496206 tig0010302:-22273 Msa1348330:CDS
CAATAGGAAGGAAGGAAGGA+AGG 0.497327 tig0010302:+27797 None:intergenic
TTTAGCAGAGTTTCTATCAA+AGG 0.497850 tig0010302:-26590 Msa1348330:CDS
ATTCCAATGGAATCCGGACC+AGG 0.499148 tig0010302:+26008 None:intergenic
CATTTAGAACATCCACAGTT+CGG 0.500936 tig0010302:+25771 None:intergenic
TGCGGCACTGGAGGCATACT+AGG 0.502619 tig0010302:+25342 None:intergenic
TGCGATATTATCTTGAAGAT+GGG 0.503723 tig0010302:+23183 None:intergenic
AGTTATTGGCCTCCCCATGC+TGG 0.504544 tig0010302:+22260 None:intergenic
TACTGGAACCGCTGTTGAGT+GGG 0.504776 tig0010302:-26566 Msa1348330:CDS
GTTCTAAATGTTATGTCCAC+AGG 0.505259 tig0010302:-25758 Msa1348330:CDS
GAGAAGCAGAGGAAAGAAGC+TGG 0.505430 tig0010302:-27306 Msa1348330:CDS
AAGATGATGGGACTAAATCT+TGG 0.505856 tig0010302:-24664 Msa1348330:CDS
GCAACGATTCCAATGGAATC+CGG 0.506436 tig0010302:+26002 None:intergenic
CTAAGCGCACGTAGAGCTGC+AGG 0.508511 tig0010302:+24893 None:intergenic
TTTGGCACATAGCACAGAAC+TGG 0.509436 tig0010302:+24612 None:intergenic
CTAAATCTTGGTTATAACAA+TGG 0.512081 tig0010302:-24652 Msa1348330:CDS
GTGGGCATATGCACCACCTA+TGG 0.512529 tig0010302:-22042 Msa1348330:three_prime_UTR
AGGGATGATATTACAATGCC+TGG 0.513022 tig0010302:-23869 Msa1348330:CDS
TAGATTAAAAGATAGGATGT+AGG 0.513948 tig0010302:-22147 Msa1348330:three_prime_UTR
GGAACCACTGGAAACAAAGC+AGG 0.514125 tig0010302:-23277 Msa1348330:CDS
GTGAGTTCAGGATGCAAAGA+TGG 0.514612 tig0010302:-27626 Msa1348330:CDS
TCCTCAGCTTTGTAGTGGAG+TGG 0.515145 tig0010302:-23577 Msa1348330:intron
CTGAAGCACAAACGCTTACT+CGG 0.516996 tig0010302:-23045 Msa1348330:CDS
TCCTCAAAGATAGGCTCTCA+TGG 0.518370 tig0010302:-25805 Msa1348330:CDS
TCGTGGGTCTTGAACCTGCA+AGG 0.518555 tig0010302:-25935 Msa1348330:CDS
TCAGCAGCTGCCATTAAAGC+TGG 0.518942 tig0010302:-24158 Msa1348330:CDS
GCAAGATCGAGTGTGCGGTT+AGG 0.519277 tig0010302:+23316 None:intergenic
GGAATCGTTGCAATTTCTCA+TGG 0.524738 tig0010302:-25990 Msa1348330:CDS
GTTTAAAGCTTGTTAAGAGA+GGG 0.525379 tig0010302:+27717 None:intergenic
TTTAGTCCCATCATCTTGCT+AGG 0.525629 tig0010302:+24670 None:intergenic
AACTCGTGTCCGTAGTGGCA+AGG 0.527560 tig0010302:+26869 None:intergenic
TGTTGCCTGCGAAGAGAAGT+TGG 0.527712 tig0010302:+27512 None:intergenic
CGCATCTGAGTGATGCCAAA+GGG 0.530194 tig0010302:+22838 None:intergenic
GTTGTATGCGCCAACAACTC+TGG 0.530549 tig0010302:-25579 Msa1348330:CDS
TGCGGGAACACAGATCAGAA+TGG 0.530863 tig0010302:-24205 Msa1348330:CDS
CAAAACCAACTTCTCTTCGC+AGG 0.532329 tig0010302:-27517 Msa1348330:CDS
GAAAAGATATTTGATGACAA+TGG 0.533386 tig0010302:-22543 Msa1348330:CDS
CTGGTCCATGTAGCTTGCCA+GGG 0.538428 tig0010302:-24139 Msa1348330:CDS
AGGTAGCTTAATTAGGATGA+TGG 0.540548 tig0010302:-27651 Msa1348330:exon
CTGCATGTAAAGCAATTCAA+TGG 0.540926 tig0010302:+25724 None:intergenic
AGCAACCAGAAGTCGCGACC+TGG 0.542154 tig0010302:+25554 None:intergenic
TCAGCCAAGTGTGACAGGAT+GGG 0.542398 tig0010302:-24924 Msa1348330:CDS
TCAAGATAATATCGCAGCTA+TGG 0.544488 tig0010302:-23176 Msa1348330:CDS
CAAGGGATGCAAGCCCTGCT+GGG 0.545537 tig0010302:-26810 Msa1348330:intron
TGATGTCTTGAAGTGCAACC+AGG 0.546715 tig0010302:+22571 None:intergenic
TCACTTAACAACACACAGAA+TGG 0.547612 tig0010302:-25366 Msa1348330:CDS
CTGATTAGACCCTGTGAAGG+AGG 0.548637 tig0010302:-25285 Msa1348330:CDS
GTCAACGGGTTTACAGATGA+TGG 0.550490 tig0010302:-24751 Msa1348330:CDS
TGATTAGACCCTGTGAAGGA+GGG 0.553128 tig0010302:-25284 Msa1348330:CDS
TTCAAGACCCACGAGGCCGC+AGG 0.553773 tig0010302:+25944 None:intergenic
ACAGACGACCCTTGCCACTA+CGG 0.558722 tig0010302:-26878 Msa1348330:intron
TATTTGATGACTTACCCAGC+AGG 0.561038 tig0010302:+26796 None:intergenic
TATAACTATTATATTGCTGT+GGG 0.561696 tig0010302:-22060 Msa1348330:three_prime_UTR
TGCTAAAGTCTCCTCTGCAA+TGG 0.562754 tig0010302:+26606 None:intergenic
CTATAACTATTATATTGCTG+TGG 0.564272 tig0010302:-22061 Msa1348330:three_prime_UTR
GTATTTGTTTATCCAGCATG+GGG 0.564375 tig0010302:-22272 Msa1348330:CDS
GTCCTTGTAGAATGTCCCTC+CGG 0.565212 tig0010302:-24246 Msa1348330:intron
AGCATGGATGACTCATAAAG+TGG 0.566145 tig0010302:+25107 None:intergenic
TTTGGAGGATGGCAGTCTTG+TGG 0.566818 tig0010302:-25516 Msa1348330:intron
GCAGAACTACTTAAATGTGA+AGG 0.568295 tig0010302:-22881 Msa1348330:CDS
AGGGTAATTAACCTTCATCC+CGG 0.569520 tig0010302:+26534 None:intergenic
AAGTTTGGTTCCAGAACAGA+AGG 0.569991 tig0010302:-27439 Msa1348330:intron
TCTGAGAACCAAAACGCGAA+GGG 0.570540 tig0010302:+23095 None:intergenic
TGTGCAATAGGAAGGAAGGA+AGG 0.570640 tig0010302:+27793 None:intergenic
AATGGTTCCTCCATTTCCTG+TGG 0.571463 tig0010302:+25742 None:intergenic
GATTAGACCCTGTGAAGGAG+GGG 0.573104 tig0010302:-25283 Msa1348330:CDS
AGAAATTGCAACGATTCCAA+TGG 0.574191 tig0010302:+25995 None:intergenic
ACTCGTGTCCGTAGTGGCAA+GGG 0.576336 tig0010302:+26870 None:intergenic
GCAGGTGCAGAGAGAAGCAG+AGG 0.578902 tig0010302:-27317 Msa1348330:intron
AAAACTTCAGGCACACTCCA+AGG 0.579548 tig0010302:+25134 None:intergenic
GGTTTAAAGCTTGTTAAGAG+AGG 0.581152 tig0010302:+27716 None:intergenic
TGTGTGTGCAATAGGAAGGA+AGG 0.582207 tig0010302:+27789 None:intergenic
AGGCACGTGCAGCCACTCCA+GGG 0.585841 tig0010302:+25964 None:intergenic
CTACTGGAACCGCTGTTGAG+TGG 0.586215 tig0010302:-26567 Msa1348330:CDS
TTCTGAGAACCAAAACGCGA+AGG 0.588476 tig0010302:+23094 None:intergenic
AAGGTACACACCAGAGCAAG+TGG 0.590467 tig0010302:-27570 Msa1348330:CDS
CTAACAAAATGCGGCACTGG+AGG 0.590611 tig0010302:+25333 None:intergenic
ATTGTGTGTGTGCAATAGGA+AGG 0.591816 tig0010302:+27785 None:intergenic
TGGTCTATGTTAGATAGTGA+TGG 0.594042 tig0010302:-24727 Msa1348330:CDS
GTGTGACAGGATGGGGAAGG+CGG 0.594930 tig0010302:-24916 Msa1348330:CDS
TGGACAATGGAAAGTACGTA+AGG 0.595746 tig0010302:-27589 Msa1348330:CDS
TGGTCCATGTAGCTTGCCAG+GGG 0.596219 tig0010302:-24138 Msa1348330:CDS
CTTATGAGAGAGCTGTAGCA+TGG 0.596800 tig0010302:-22239 Msa1348330:CDS
GCGCCAACAACTCTGGCACC+AGG 0.600039 tig0010302:-25572 Msa1348330:CDS
CGTGGGTCTTGAACCTGCAA+GGG 0.600458 tig0010302:-25934 Msa1348330:intron
TTGAGTGGGTCCAAATGCCC+GGG 0.600560 tig0010302:-26552 Msa1348330:CDS
GGATTCAACGAAGCTGTCAA+CGG 0.601339 tig0010302:-24766 Msa1348330:CDS
CAGAACTACTTAAATGTGAA+GGG 0.602255 tig0010302:-22880 Msa1348330:CDS
ACAGAACTGGTGGTGACAGA+TGG 0.602468 tig0010302:+24625 None:intergenic
GGGTAATTAACCTTCATCCC+GGG 0.604192 tig0010302:+26535 None:intergenic
TCATCACCTAGCAAGATGAT+GGG 0.607665 tig0010302:-24676 Msa1348330:CDS
TTTGTTTATCCAGCATGGGG+AGG 0.608499 tig0010302:-22269 Msa1348330:CDS
GTTATGTCCACAGGAAATGG+AGG 0.608625 tig0010302:-25749 Msa1348330:CDS
GCATGGATGACTCATAAAGT+GGG 0.609344 tig0010302:+25108 None:intergenic
AGCAAGATAGCAATGGACAA+TGG 0.610868 tig0010302:-27602 Msa1348330:CDS
AGCAGAGGAAAGAAGCTGGA+AGG 0.615005 tig0010302:-27302 Msa1348330:CDS
GGAGTGGCTGCACGTGCCTG+CGG 0.616801 tig0010302:-25960 Msa1348330:CDS
ATTAGACCCTGTGAAGGAGG+GGG 0.617333 tig0010302:-25282 Msa1348330:CDS
GGAGTGGACGAGCATGCAGT+TGG 0.618690 tig0010302:-23561 Msa1348330:CDS
ATTTGATGACTTACCCAGCA+GGG 0.619457 tig0010302:+26797 None:intergenic
AGATGGTAGCAAGATAGCAA+TGG 0.621096 tig0010302:-27609 Msa1348330:CDS
AGGTGATGAATTCACAAGAA+GGG 0.622669 tig0010302:+24690 None:intergenic
CATACCTCTTGAATCTAGCA+CGG 0.625244 tig0010302:-23457 Msa1348330:CDS
CTCACAACTCGTGTCCGTAG+TGG 0.627252 tig0010302:+26864 None:intergenic
GGCACATAGCACAGAACTGG+TGG 0.630842 tig0010302:+24615 None:intergenic
CGGTCAGCAGCATCCACCAA+GGG 0.631326 tig0010302:-26827 Msa1348330:CDS
TAGGTGATGAATTCACAAGA+AGG 0.633200 tig0010302:+24689 None:intergenic
GGCACGTGCAGCCACTCCAG+GGG 0.635325 tig0010302:+25965 None:intergenic
AATGAACAAACTGCTTATGG+AGG 0.636215 tig0010302:-27250 Msa1348330:CDS
ATCTAAGAAGAATAGCCGGA+GGG 0.640469 tig0010302:+24231 None:intergenic
CCGCATCTGAGTGATGCCAA+AGG 0.646305 tig0010302:+22837 None:intergenic
ACGGGTTTACAGATGATGGA+TGG 0.646531 tig0010302:-24747 Msa1348330:CDS
CTGAGAACCAAAACGCGAAG+GGG 0.646857 tig0010302:+23096 None:intergenic
TGTTCTCTGAGCAAGCAGCA+TGG 0.647938 tig0010302:+25091 None:intergenic
ATACCTGCTGCATTATCTGG+GGG 0.648878 tig0010302:+22496 None:intergenic
AAAAGAAATGAGTCCATAGG+TGG 0.649262 tig0010302:+22029 None:intergenic
GTTATCAAGCTTGAGAACAT+GGG 0.649916 tig0010302:-23899 Msa1348330:CDS
TATACCTGCTGCATTATCTG+GGG 0.653102 tig0010302:+22495 None:intergenic
CAAGTGTGACAGGATGGGGA+AGG 0.654511 tig0010302:-24919 Msa1348330:CDS
TGTAAGAGGAAAATATCACC+AGG 0.656562 tig0010302:+23851 None:intergenic
CTTGCCGTGCTAGATTCAAG+AGG 0.658066 tig0010302:+23453 None:intergenic
ACTTCAGCTCTAACAAAATG+CGG 0.660310 tig0010302:+25324 None:intergenic
GGACACGAGTTGTGAGTCAG+TGG 0.661062 tig0010302:-26857 Msa1348330:CDS
GATGTCTTGAAGTGCAACCA+GGG 0.661753 tig0010302:+22572 None:intergenic
GAACCACTGGAAACAAAGCA+GGG 0.663545 tig0010302:-23276 Msa1348330:CDS
GCGGTCAGCAGCATCCACCA+AGG 0.664352 tig0010302:-26828 Msa1348330:CDS
GGTATGATACGAAAACCAGA+AGG 0.665928 tig0010302:+23474 None:intergenic
GGTCTAATCAGATAACCGCT+AGG 0.667041 tig0010302:+25297 None:intergenic
AATCTAAGAAGAATAGCCGG+AGG 0.667152 tig0010302:+24230 None:intergenic
CCTTTGGCATCACTCAGATG+CGG 0.670379 tig0010302:-22837 Msa1348330:CDS
TTCTGTAATACAGTTCATGG+AGG 0.670808 tig0010302:-23921 Msa1348330:intron
TATCTGATTAGACCCTGTGA+AGG 0.676545 tig0010302:-25288 Msa1348330:CDS
GAATTATACCTGTAACAACA+TGG 0.676552 tig0010302:+24585 None:intergenic
TGTGAGTCAGTGGTAACAAG+CGG 0.679277 tig0010302:-26847 Msa1348330:CDS
AAGCACAAACGCTTACTCGG+TGG 0.679968 tig0010302:-23042 Msa1348330:CDS
CAGAAGCAAGATCGAGTGTG+CGG 0.682497 tig0010302:+23311 None:intergenic
GTATCGTGATTGCCGAACTG+TGG 0.685847 tig0010302:-25783 Msa1348330:CDS
ACCACTGGAAACAAAGCAGG+GGG 0.697026 tig0010302:-23274 Msa1348330:CDS
TGTGCTTCAGGAGTTCCAGG+TGG 0.700188 tig0010302:+23058 None:intergenic
CATTTGGACCCACTCAACAG+CGG 0.704277 tig0010302:+26558 None:intergenic
TGACATGCTTGAAACCACCC+TGG 0.704585 tig0010302:-22589 Msa1348330:CDS
GGTTTCATGTGTATTCAAGG+TGG 0.704702 tig0010302:-22294 Msa1348330:CDS
AACCACTGGAAACAAAGCAG+GGG 0.710996 tig0010302:-23275 Msa1348330:CDS
AGAGCTGAAGTGTTGCCTAG+CGG 0.716290 tig0010302:-25312 Msa1348330:CDS
GTCTTGAAGTGCAACCAGGG+TGG 0.726402 tig0010302:+22575 None:intergenic
TTGCAGGTTCAAGACCCACG+AGG 0.774422 tig0010302:+25937 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGTATATTTATAATTTATT+TGG - tig0010302:22489-22508 Msa1348330:intron 10.0%
!! TTAATAAATTAATAATGAAG+AGG + tig0010302:24014-24033 None:intergenic 10.0%
!!! TTTTAACAATATCAATATTT+AGG - tig0010302:24508-24527 Msa1348330:intron 10.0%
!!! TATTTTATAGAATAAGTAAA+AGG + tig0010302:24702-24721 None:intergenic 10.0%
!! CTAAAACATTATATTATATA+AGG + tig0010302:27217-27236 None:intergenic 10.0%
!! TTATAGATCATTATACTATA+CGG + tig0010302:22041-22060 None:intergenic 15.0%
!! AATTTATTTGGCAAATTAAA+AGG - tig0010302:22501-22520 Msa1348330:CDS 15.0%
!! ATTTATTTGGCAAATTAAAA+GGG - tig0010302:22502-22521 Msa1348330:CDS 15.0%
!!! TTAAAATAATGATTTTAGCT+AGG + tig0010302:22910-22929 None:intergenic 15.0%
!!! TAGCTAAAATCATTATTTTA+AGG - tig0010302:22909-22928 Msa1348330:intron 15.0%
!!! TAGTAATGGAATATTATTTA+TGG - tig0010302:23242-23261 Msa1348330:CDS 15.0%
!! AAAAATAGTGAATGTTATTA+AGG + tig0010302:23530-23549 None:intergenic 15.0%
!! ATATAATATATAGTACTCAA+GGG + tig0010302:25424-25443 None:intergenic 15.0%
!! AATATAATATATAGTACTCA+AGG + tig0010302:25425-25444 None:intergenic 15.0%
!!! TATTTTTTCTGATAAGAATT+TGG - tig0010302:27130-27149 Msa1348330:intron 15.0%
!!! TAACGATATATGAAATATTT+TGG - tig0010302:27586-27605 Msa1348330:CDS 15.0%
!!! TAATTACATTTTGTGTATGT+TGG + tig0010302:22742-22761 None:intergenic 20.0%
!! ATGATCATAAAAGAAATGTT+AGG - tig0010302:22853-22872 Msa1348330:CDS 20.0%
!! AGTAAAATAGCAAAATACAA+GGG + tig0010302:23142-23161 None:intergenic 20.0%
!! TAGTAAAATAGCAAAATACA+AGG + tig0010302:23143-23162 None:intergenic 20.0%
!! AGTATAGTACTATAGTTATA+TGG + tig0010302:23173-23192 None:intergenic 20.0%
!! ATATAACTATAGTACTATAC+TGG - tig0010302:23172-23191 Msa1348330:CDS 20.0%
!! AATAAAAGGTAAAGAAAGTA+GGG + tig0010302:23396-23415 None:intergenic 20.0%
!! AAATAAAAGGTAAAGAAAGT+AGG + tig0010302:23397-23416 None:intergenic 20.0%
!! AATTAAGAAGGTGAAATAAA+AGG + tig0010302:23410-23429 None:intergenic 20.0%
!! ATAAAGGGAATAAATTAAGA+AGG + tig0010302:23422-23441 None:intergenic 20.0%
!! TACTATGTAATGCAAATAAA+GGG + tig0010302:23437-23456 None:intergenic 20.0%
!! ATCTCATTAGTGTTAATTAA+AGG - tig0010302:23570-23589 Msa1348330:CDS 20.0%
!!! ATTGAAAGATTCTTTCATTT+TGG - tig0010302:23630-23649 Msa1348330:intron 20.0%
!!! TTGAAAGATTCTTTCATTTT+GGG - tig0010302:23631-23650 Msa1348330:intron 20.0%
!! ATAAAGGTAAAAAATCAATC+AGG + tig0010302:23706-23725 None:intergenic 20.0%
!! AAGAAAAATTACATCACATA+AGG + tig0010302:23737-23756 None:intergenic 20.0%
!!! AAAAGAAAATATAAGAGTGT+TGG + tig0010302:23820-23839 None:intergenic 20.0%
!! AACATTTACATCACATAATT+AGG + tig0010302:23843-23862 None:intergenic 20.0%
!! TAAATTAATAATGAAGAGGA+AGG + tig0010302:24010-24029 None:intergenic 20.0%
!! ATGATCAACAATATGAATTA+TGG + tig0010302:24654-24673 None:intergenic 20.0%
!! AACTGAAAGTTAAGTAAATA+TGG + tig0010302:24727-24746 None:intergenic 20.0%
!! TTTACCTTCAAATCTATATA+TGG + tig0010302:24875-24894 None:intergenic 20.0%
!!! TTACTTCCTTTTTATTTTAC+AGG - tig0010302:25119-25138 Msa1348330:CDS 20.0%
!!! TACTTCCTTTTTATTTTACA+GGG - tig0010302:25120-25139 Msa1348330:CDS 20.0%
!! AAATACATGTAGTAAATGTT+TGG + tig0010302:25612-25631 None:intergenic 20.0%
!!! AATTTAAATATGATTTTGGC+AGG - tig0010302:27259-27278 Msa1348330:CDS 20.0%
!! AATACCATAGATAAGATTAA+AGG + tig0010302:27807-27826 None:intergenic 20.0%
!! TTAATCTTATCTATGGTATT+TGG - tig0010302:27807-27826 Msa1348330:five_prime_UTR 20.0%
!! TATAACTATTATATTGCTGT+GGG - tig0010302:27848-27867 Msa1348330:five_prime_UTR 20.0%
! CAACACAAAATAATCTTCTT+TGG + tig0010302:22216-22235 None:intergenic 25.0%
!!! AAGATTATTTTGTGTTGAGT+TGG - tig0010302:22219-22238 Msa1348330:CDS 25.0%
!!! AGATTATTTTGTGTTGAGTT+GGG - tig0010302:22220-22239 Msa1348330:CDS 25.0%
! TATAAATATACCTTCTGTTC+TGG + tig0010302:22482-22501 None:intergenic 25.0%
!!! GTGTTGTTTATTAATTTTGC+AGG - tig0010302:22573-22592 Msa1348330:CDS 25.0%
! GTACTATGTAATGCAAATAA+AGG + tig0010302:23438-23457 None:intergenic 25.0%
!! AGTAAAAAAAGAAGTTGGTT+TGG + tig0010302:23494-23513 None:intergenic 25.0%
!! GAATGTTATTAAGGTTTGTT+TGG + tig0010302:23521-23540 None:intergenic 25.0%
!!! TTCACTATTTTTAACTGCAT+TGG - tig0010302:23538-23557 Msa1348330:CDS 25.0%
!!! TATTTTTAACTGCATTGGTA+TGG - tig0010302:23543-23562 Msa1348330:CDS 25.0%
!!! AATTTTTTCGTCAACTAAGT+CGG - tig0010302:23657-23676 Msa1348330:intron 25.0%
! ACATAAGGAAAAGGATATAA+AGG + tig0010302:23722-23741 None:intergenic 25.0%
! AATTACATCACATAAGGAAA+AGG + tig0010302:23731-23750 None:intergenic 25.0%
! TTCACTCAATGCATATTAAT+GGG + tig0010302:24047-24066 None:intergenic 25.0%
! TCTTAGTCACAATAATAACT+TGG - tig0010302:24245-24264 Msa1348330:intron 25.0%
! TTCAAATCTATATATGGCAA+TGG + tig0010302:24869-24888 None:intergenic 25.0%
! ATTGCCATATATAGATTTGA+AGG - tig0010302:24868-24887 Msa1348330:intron 25.0%
!!! ACTTCCTTTTTATTTTACAG+GGG - tig0010302:25121-25140 Msa1348330:CDS 25.0%
! CTAAATCTTGGTTATAACAA+TGG - tig0010302:25256-25275 Msa1348330:CDS 25.0%
!! TTAAGTTTTACTAGTGTGTT+TGG - tig0010302:25443-25462 Msa1348330:intron 25.0%
! TTGGAATAGTACTAAGTTAT+TGG - tig0010302:25462-25481 Msa1348330:intron 25.0%
!! TGATTTTACTGATGTCAAAA+TGG + tig0010302:25557-25576 None:intergenic 25.0%
! AAAAATCTAAGAAGAATAGC+CGG + tig0010302:25684-25703 None:intergenic 25.0%
!! CTATTCTTCTTAGATTTTTG+CGG - tig0010302:25685-25704 Msa1348330:intron 25.0%
!! TATTCTTCTTAGATTTTTGC+GGG - tig0010302:25686-25705 Msa1348330:intron 25.0%
! ATGTAAGAGATAACAAAATC+AGG + tig0010302:25875-25894 None:intergenic 25.0%
! CTAAAATACTTACTTGTAAG+AGG + tig0010302:26074-26093 None:intergenic 25.0%
! AATAGATATGTTCAAGAGAA+TGG + tig0010302:26101-26120 None:intergenic 25.0%
! GAAGAATTTCAGAAACAATA+TGG + tig0010302:26508-26527 None:intergenic 25.0%
! ATGATGATCTTAATCATGTT+CGG - tig0010302:26966-26985 Msa1348330:intron 25.0%
!! TTTTCTGATAAGAATTTGGT+TGG - tig0010302:27134-27153 Msa1348330:intron 25.0%
!! GTCATCAAATATCTTTTCTA+GGG + tig0010302:27363-27382 None:intergenic 25.0%
!! TGTCATCAAATATCTTTTCT+AGG + tig0010302:27364-27383 None:intergenic 25.0%
!! GAAAAGATATTTGATGACAA+TGG - tig0010302:27365-27384 Msa1348330:intron 25.0%
!! AAAGAGTATGTTGATGTTAA+CGG - tig0010302:27455-27474 Msa1348330:CDS 25.0%
!!! TATATGAAATATTTTGGTGC+AGG - tig0010302:27592-27611 Msa1348330:CDS 25.0%
!!! ATATGAAATATTTTGGTGCA+GGG - tig0010302:27593-27612 Msa1348330:CDS 25.0%
! TGTCTAGTAGATTAAAAGAT+AGG - tig0010302:27754-27773 Msa1348330:intron 25.0%
! TAGATTAAAAGATAGGATGT+AGG - tig0010302:27761-27780 Msa1348330:intron 25.0%
! CTAACCTTTAATCTTATCTA+TGG - tig0010302:27800-27819 Msa1348330:five_prime_UTR 25.0%
! CTATAACTATTATATTGCTG+TGG - tig0010302:27847-27866 Msa1348330:five_prime_UTR 25.0%
!! GTTTAAAGCTTGTTAAGAGA+GGG + tig0010302:22194-22213 None:intergenic 30.0%
AACCTAAACAGATCAAAGTT+TGG - tig0010302:22454-22473 Msa1348330:intron 30.0%
AACCAAACTTTGATCTGTTT+AGG + tig0010302:22459-22478 None:intergenic 30.0%
! TTACATTTTGTGTATGTTGG+CGG + tig0010302:22739-22758 None:intergenic 30.0%
GCTATAGAAAGAAGAATATG+AGG + tig0010302:22766-22785 None:intergenic 30.0%
!! TAAATTTTGCCATTTGAGTC+TGG - tig0010302:22876-22895 Msa1348330:CDS 30.0%
TTTAGCAGAGTTTCTATCAA+AGG - tig0010302:23318-23337 Msa1348330:CDS 30.0%
GACTTAGTTGACGAAAAAAT+TGG + tig0010302:23658-23677 None:intergenic 30.0%
! ATCCTTATACTCAAGACTTT+TGG - tig0010302:23778-23797 Msa1348330:intron 30.0%
GTTCACTCAATGCATATTAA+TGG + tig0010302:24048-24067 None:intergenic 30.0%
AAATTTGTGATGTCCTTTAC+AGG - tig0010302:24071-24090 Msa1348330:intron 30.0%
CATGTTAGATTTCGTTAATG+TGG + tig0010302:24293-24312 None:intergenic 30.0%
TACATGTTTATGCACCTATA+TGG - tig0010302:24430-24449 Msa1348330:intron 30.0%
TGTTAAACATGCAACCATAT+AGG + tig0010302:24447-24466 None:intergenic 30.0%
!! AATATCAGAGTTTGAGTTGA+AGG + tig0010302:24479-24498 None:intergenic 30.0%
! TGTTGATCATATGCTTTTAG+AGG - tig0010302:24664-24683 Msa1348330:CDS 30.0%
AGATTTGAAGGTAAACATGT+TGG - tig0010302:24880-24899 Msa1348330:CDS 30.0%
TTTAGGCTTTACGTCATTTA+AGG - tig0010302:24941-24960 Msa1348330:CDS 30.0%
AATGCAATTGTGAAGGAAAA+TGG + tig0010302:25063-25082 None:intergenic 30.0%
TAGTAACAATGCAATTGTGA+AGG + tig0010302:25070-25089 None:intergenic 30.0%
GAATCCCCTGTAAAATAAAA+AGG + tig0010302:25128-25147 None:intergenic 30.0%
GAATTATACCTGTAACAACA+TGG + tig0010302:25326-25345 None:intergenic 30.0%
TTCTTAGTACTCACTACTTA+TGG - tig0010302:25353-25372 Msa1348330:CDS 30.0%
ATATATAGTACTCAAGGGAA+AGG + tig0010302:25419-25438 None:intergenic 30.0%
TACTAAGTTATTGGTGTGTT+TGG - tig0010302:25471-25490 Msa1348330:intron 30.0%
! ACAAAATAATAGCTTGTGGT+TGG + tig0010302:25527-25546 None:intergenic 30.0%
AGCTACAAAATAATAGCTTG+TGG + tig0010302:25531-25550 None:intergenic 30.0%
TTGACATCAGTAAAATCACT+TGG - tig0010302:25559-25578 Msa1348330:CDS 30.0%
! TCAAACATGTTTTTCGTCTT+TGG - tig0010302:25939-25958 Msa1348330:CDS 30.0%
! GTTTTCTGTAATACAGTTCA+TGG - tig0010302:25984-26003 Msa1348330:CDS 30.0%
CTCTCAATTGCAATTATAGA+AGG + tig0010302:26171-26190 None:intergenic 30.0%
TTGAGAGAAAACACTTCTAT+TGG - tig0010302:26184-26203 Msa1348330:intron 30.0%
CTGATTATAGAAGATGCTTT+CGG - tig0010302:26269-26288 Msa1348330:intron 30.0%
TGCGATATTATCTTGAAGAT+GGG + tig0010302:26728-26747 None:intergenic 30.0%
TGATGATCTTAATCATGTTC+GGG - tig0010302:26967-26986 Msa1348330:intron 30.0%
!!! TTTTTTCGCAGATTCTATCT+AGG - tig0010302:27003-27022 Msa1348330:intron 30.0%
CAGAACTACTTAAATGTGAA+GGG - tig0010302:27028-27047 Msa1348330:intron 30.0%
AATCGATACTTAAATCCCTT+TGG - tig0010302:27055-27074 Msa1348330:intron 30.0%
! TTGATTCGCAAACGTAAAAA+CGG + tig0010302:27291-27310 None:intergenic 30.0%
! AAGAGTATGTTGATGTTAAC+GGG - tig0010302:27456-27475 Msa1348330:CDS 30.0%
TCTGTTTCATGTTCATCAAT+TGG - tig0010302:27726-27745 Msa1348330:five_prime_UTR 30.0%
CTAAAAAGAAATGAGTCCAT+AGG + tig0010302:27885-27904 None:intergenic 30.0%
AGTTTGTCTGTGACAATTGT+TGG + tig0010302:22067-22086 None:intergenic 35.0%
AGGAAGCTTAAAAGAGATGT+TGG + tig0010302:22094-22113 None:intergenic 35.0%
GAATATTGTGTGTGTGCAAT+AGG + tig0010302:22130-22149 None:intergenic 35.0%
!! GGTTTAAAGCTTGTTAAGAG+AGG + tig0010302:22195-22214 None:intergenic 35.0%
!!! TATTTTGTGTTGAGTTGGGT+TGG - tig0010302:22224-22243 Msa1348330:CDS 35.0%
TGGAAGAAGGTAGCTTAATT+AGG - tig0010302:22250-22269 Msa1348330:CDS 35.0%
AGGTAGCTTAATTAGGATGA+TGG - tig0010302:22257-22276 Msa1348330:CDS 35.0%
!!! AAGTTGGTTTTGGACATTCA+TGG + tig0010302:22383-22402 None:intergenic 35.0%
GGTTCAATATGAGAGAGAAT+AGG + tig0010302:22438-22457 None:intergenic 35.0%
AGCAATGAACAAACTGCTTA+TGG - tig0010302:22655-22674 Msa1348330:intron 35.0%
AATGAACAAACTGCTTATGG+AGG - tig0010302:22658-22677 Msa1348330:intron 35.0%
TACTATCCAACGACATACAT+TGG + tig0010302:23227-23246 None:intergenic 35.0%
TGTATGTCGTTGGATAGTAA+TGG - tig0010302:23228-23247 Msa1348330:CDS 35.0%
GCAGCAGTAAAAAAAGAAGT+TGG + tig0010302:23499-23518 None:intergenic 35.0%
AGAAATTGCAACGATTCCAA+TGG + tig0010302:23916-23935 None:intergenic 35.0%
TTGCTGAAATCCTCAAAGAT+AGG - tig0010302:24094-24113 Msa1348330:intron 35.0%
! CATTTAGAACATCCACAGTT+CGG + tig0010302:24140-24159 None:intergenic 35.0%
! GTTCTAAATGTTATGTCCAC+AGG - tig0010302:24150-24169 Msa1348330:CDS 35.0%
AATGTTATGTCCACAGGAAA+TGG - tig0010302:24156-24175 Msa1348330:CDS 35.0%
CTGCATGTAAAGCAATTCAA+TGG + tig0010302:24187-24206 None:intergenic 35.0%
CATTGAATTGCTTTACATGC+AGG - tig0010302:24185-24204 Msa1348330:CDS 35.0%
!! GAGTTTGAGTTGAAGGATAT+AGG + tig0010302:24472-24491 None:intergenic 35.0%
TCACTTAACAACACACAGAA+TGG - tig0010302:24542-24561 Msa1348330:intron 35.0%
! ACTTCAGCTCTAACAAAATG+CGG + tig0010302:24587-24606 None:intergenic 35.0%
!! TGATTCTTTGAAATCAGCCT+TGG - tig0010302:24757-24776 Msa1348330:CDS 35.0%
TGGTCTATGTTAGATAGTGA+TGG - tig0010302:25181-25200 Msa1348330:intron 35.0%
AGGTGATGAATTCACAAGAA+GGG + tig0010302:25221-25240 None:intergenic 35.0%
TAGGTGATGAATTCACAAGA+AGG + tig0010302:25222-25241 None:intergenic 35.0%
!! AAGATGATGGGACTAAATCT+TGG - tig0010302:25244-25263 Msa1348330:intron 35.0%
ACCAAATGACTTCTGATACT+CGG - tig0010302:25501-25520 Msa1348330:intron 35.0%
ACTGTATTACAGAAAACCAC+TGG + tig0010302:25981-26000 None:intergenic 35.0%
TTCTGTAATACAGTTCATGG+AGG - tig0010302:25987-26006 Msa1348330:CDS 35.0%
GTTATCAAGCTTGAGAACAT+GGG - tig0010302:26009-26028 Msa1348330:CDS 35.0%
TGTAAGAGGAAAATATCACC+AGG + tig0010302:26060-26079 None:intergenic 35.0%
AATAGTTAGCTATGCACATG+AGG + tig0010302:26296-26315 None:intergenic 35.0%
TCAGAGAAAGATGCATCAAT+TGG + tig0010302:26398-26417 None:intergenic 35.0%
GAAATTCTTCCACTTCTTGT+TGG - tig0010302:26518-26537 Msa1348330:intron 35.0%
CTGCGATATTATCTTGAAGA+TGG + tig0010302:26729-26748 None:intergenic 35.0%
TCAAGATAATATCGCAGCTA+TGG - tig0010302:26732-26751 Msa1348330:intron 35.0%
TGCTGTTATGCATAGTGAAA+TGG + tig0010302:26930-26949 None:intergenic 35.0%
GCAGAACTACTTAAATGTGA+AGG - tig0010302:27027-27046 Msa1348330:intron 35.0%
! AGTCACAACGTTTGATTTAG+CGG + tig0010302:27189-27208 None:intergenic 35.0%
TGATTCGCAAACGTAAAAAC+GGG + tig0010302:27290-27309 None:intergenic 35.0%
! ATGTTGATGTTAACGGGTAT+TGG - tig0010302:27462-27481 Msa1348330:CDS 35.0%
! TGTTGATGTTAACGGGTATT+GGG - tig0010302:27463-27482 Msa1348330:CDS 35.0%
AAAATGTATGCGACGAAGTT+TGG - tig0010302:27512-27531 Msa1348330:CDS 35.0%
TGGTATTTGTTTATCCAGCA+TGG - tig0010302:27634-27653 Msa1348330:CDS 35.0%
GGTATTTGTTTATCCAGCAT+GGG - tig0010302:27635-27654 Msa1348330:CDS 35.0%
GTATTTGTTTATCCAGCATG+GGG - tig0010302:27636-27655 Msa1348330:CDS 35.0%
ACAGCTCTCTCATAAGTTAT+TGG + tig0010302:27665-27684 None:intergenic 35.0%
AAAAGAAATGAGTCCATAGG+TGG + tig0010302:27882-27901 None:intergenic 35.0%
ATTGTGTGTGTGCAATAGGA+AGG + tig0010302:22126-22145 None:intergenic 40.0%
AGATGGTAGCAAGATAGCAA+TGG - tig0010302:22299-22318 Msa1348330:intron 40.0%
AGCAAGATAGCAATGGACAA+TGG - tig0010302:22306-22325 Msa1348330:intron 40.0%
! TGGACAATGGAAAGTACGTA+AGG - tig0010302:22319-22338 Msa1348330:intron 40.0%
! AAGTTTGGTTCCAGAACAGA+AGG - tig0010302:22469-22488 Msa1348330:intron 40.0%
! ACTTTGATGATCTCAGCTCA+AGG + tig0010302:22820-22839 None:intergenic 40.0%
GAGCTGAGATCATCAAAGTT+AGG - tig0010302:22821-22840 Msa1348330:CDS 40.0%
! ATTTGATGACTTACCCAGCA+GGG + tig0010302:23114-23133 None:intergenic 40.0%
! TATTTGATGACTTACCCAGC+AGG + tig0010302:23115-23134 None:intergenic 40.0%
ACTGATCCAATGTATGTCGT+TGG - tig0010302:23218-23237 Msa1348330:CDS 40.0%
GAGTTTCTATCAAAGGCTAC+TGG - tig0010302:23325-23344 Msa1348330:CDS 40.0%
AGGGTAATTAACCTTCATCC+CGG + tig0010302:23377-23396 None:intergenic 40.0%
GGCCAAAAGTCTTGAGTATA+AGG + tig0010302:23783-23802 None:intergenic 40.0%
! ATACTCAAGACTTTTGGCCA+AGG - tig0010302:23784-23803 Msa1348330:intron 40.0%
!! GTGTTGGTTTATGTAGTCCT+TGG + tig0010302:23804-23823 None:intergenic 40.0%
! GTGATGAATGTTTTGTAGCC+TGG - tig0010302:23882-23901 Msa1348330:CDS 40.0%
GGAATCGTTGCAATTTCTCA+TGG - tig0010302:23918-23937 Msa1348330:intron 40.0%
AGGAAGTTAATTACCCTTGC+AGG + tig0010302:23990-24009 None:intergenic 40.0%
AGGATTTCAGCAACCTGTAA+AGG + tig0010302:24087-24106 None:intergenic 40.0%
!! TACACATCACTTTTGGAGGA+TGG - tig0010302:24381-24400 Msa1348330:intron 40.0%
TATCTGATTAGACCCTGTGA+AGG - tig0010302:24620-24639 Msa1348330:CDS 40.0%
GCATGGATGACTCATAAAGT+GGG + tig0010302:24803-24822 None:intergenic 40.0%
AGCATGGATGACTCATAAAG+TGG + tig0010302:24804-24823 None:intergenic 40.0%
! TAACCCTGCAATTGTCGTTT+AGG - tig0010302:24924-24943 Msa1348330:CDS 40.0%
AAGCCTAAACGACAATTGCA+GGG + tig0010302:24930-24949 None:intergenic 40.0%
AAAGCCTAAACGACAATTGC+AGG + tig0010302:24931-24950 None:intergenic 40.0%
TTCATCACCTAGCAAGATGA+TGG - tig0010302:25231-25250 Msa1348330:intron 40.0%
TCATCACCTAGCAAGATGAT+GGG - tig0010302:25232-25251 Msa1348330:intron 40.0%
TTTAGTCCCATCATCTTGCT+AGG + tig0010302:25241-25260 None:intergenic 40.0%
CTGTAACAACATGGAAGCTT+TGG + tig0010302:25317-25336 None:intergenic 40.0%
CAAAGCTTCCATGTTGTTAC+AGG - tig0010302:25315-25334 Msa1348330:CDS 40.0%
! TATCAGAAGTCATTTGGTGG+TGG + tig0010302:25499-25518 None:intergenic 40.0%
GAGTATCAGAAGTCATTTGG+TGG + tig0010302:25502-25521 None:intergenic 40.0%
ATCTAAGAAGAATAGCCGGA+GGG + tig0010302:25680-25699 None:intergenic 40.0%
AATCTAAGAAGAATAGCCGG+AGG + tig0010302:25681-25700 None:intergenic 40.0%
CTTGTAGACTAACAAACCAG+TGG - tig0010302:25962-25981 Msa1348330:CDS 40.0%
GGTTATCAAGCTTGAGAACA+TGG - tig0010302:26008-26027 Msa1348330:CDS 40.0%
! TTGAGAACATGGGCTACTAT+AGG - tig0010302:26019-26038 Msa1348330:intron 40.0%
! TGAGAACATGGGCTACTATA+GGG - tig0010302:26020-26039 Msa1348330:intron 40.0%
AGGGATGATATTACAATGCC+TGG - tig0010302:26039-26058 Msa1348330:intron 40.0%
CGAAAACCAGAAGGCAAAAT+GGG + tig0010302:26428-26447 None:intergenic 40.0%
ACGAAAACCAGAAGGCAAAA+TGG + tig0010302:26429-26448 None:intergenic 40.0%
GGTATGATACGAAAACCAGA+AGG + tig0010302:26437-26456 None:intergenic 40.0%
CATACCTCTTGAATCTAGCA+CGG - tig0010302:26451-26470 Msa1348330:intron 40.0%
ATCATCACTCCAACAAGAAG+TGG + tig0010302:26530-26549 None:intergenic 40.0%
CTTTGTCTTATGTACGATGC+AGG - tig0010302:26558-26577 Msa1348330:CDS 40.0%
! AATGCTTTTCACTTACCACC+TGG - tig0010302:26835-26854 Msa1348330:CDS 40.0%
TGATCTTAATCATGTTCGGG+CGG - tig0010302:26970-26989 Msa1348330:intron 40.0%
! GGTTCTGTGTTGCTCTTTAA+AGG - tig0010302:27092-27111 Msa1348330:intron 40.0%
TTTACGTTTGCGAATCAAGC+TGG - tig0010302:27293-27312 Msa1348330:CDS 40.0%
TATACCTGCTGCATTATCTG+GGG + tig0010302:27416-27435 None:intergenic 40.0%
CTATACCTGCTGCATTATCT+GGG + tig0010302:27417-27436 None:intergenic 40.0%
ACTATACCTGCTGCATTATC+TGG + tig0010302:27418-27437 None:intergenic 40.0%
!! TGTTAACGGGTATTGGGAAA+TGG - tig0010302:27469-27488 Msa1348330:CDS 40.0%
CAGGGTTTCATGTGTATTCA+AGG - tig0010302:27611-27630 Msa1348330:CDS 40.0%
GGTTTCATGTGTATTCAAGG+TGG - tig0010302:27614-27633 Msa1348330:CDS 40.0%
CAATAGGAAGGAAGGAAGGA+AGG + tig0010302:22114-22133 None:intergenic 45.0%
TGTGCAATAGGAAGGAAGGA+AGG + tig0010302:22118-22137 None:intergenic 45.0%
TGTGTGTGCAATAGGAAGGA+AGG + tig0010302:22122-22141 None:intergenic 45.0%
!! GTGTTGAGTTGGGTTGGATT+TGG - tig0010302:22230-22249 Msa1348330:CDS 45.0%
!! GTTGGGTTGGATTTGGAAGA+AGG - tig0010302:22237-22256 Msa1348330:CDS 45.0%
GTGAGTTCAGGATGCAAAGA+TGG - tig0010302:22282-22301 Msa1348330:CDS 45.0%
!! CTGCGAAGAGAAGTTGGTTT+TGG + tig0010302:22393-22412 None:intergenic 45.0%
CAAAACCAACTTCTCTTCGC+AGG - tig0010302:22391-22410 Msa1348330:intron 45.0%
GCAACTTGACCAGACTCAAA+TGG + tig0010302:22888-22907 None:intergenic 45.0%
TGTGAGTCAGTGGTAACAAG+CGG - tig0010302:23061-23080 Msa1348330:CDS 45.0%
! CAGACTTTTGTCCATTGCAG+AGG - tig0010302:23291-23310 Msa1348330:CDS 45.0%
TGCTAAAGTCTCCTCTGCAA+TGG + tig0010302:23305-23324 None:intergenic 45.0%
GGGTAATTAACCTTCATCCC+GGG + tig0010302:23376-23395 None:intergenic 45.0%
! GAATGTTTTGTAGCCTGGTC+CGG - tig0010302:23887-23906 Msa1348330:CDS 45.0%
GCAACGATTCCAATGGAATC+CGG + tig0010302:23909-23928 None:intergenic 45.0%
TCCTCAAAGATAGGCTCTCA+TGG - tig0010302:24103-24122 Msa1348330:intron 45.0%
ACCATGAGAGCCTATCTTTG+AGG + tig0010302:24107-24126 None:intergenic 45.0%
GTTATGTCCACAGGAAATGG+AGG - tig0010302:24159-24178 Msa1348330:CDS 45.0%
AATGGTTCCTCCATTTCCTG+TGG + tig0010302:24169-24188 None:intergenic 45.0%
GGTCTAATCAGATAACCGCT+AGG + tig0010302:24614-24633 None:intergenic 45.0%
TGATTAGACCCTGTGAAGGA+GGG - tig0010302:24624-24643 Msa1348330:CDS 45.0%
AAAACTTCAGGCACACTCCA+AGG + tig0010302:24777-24796 None:intergenic 45.0%
TAAAGTGGGCGCAAAACTTC+AGG + tig0010302:24789-24808 None:intergenic 45.0%
GCTTGCTCAGAGAACAACTA+TGG - tig0010302:24824-24843 Msa1348330:intron 45.0%
GGATTCAACGAAGCTGTCAA+CGG - tig0010302:25142-25161 Msa1348330:intron 45.0%
GATTCAACGAAGCTGTCAAC+GGG - tig0010302:25143-25162 Msa1348330:intron 45.0%
! GTCAACGGGTTTACAGATGA+TGG - tig0010302:25157-25176 Msa1348330:intron 45.0%
!! ACGGGTTTACAGATGATGGA+TGG - tig0010302:25161-25180 Msa1348330:intron 45.0%
TTTGGCACATAGCACAGAAC+TGG + tig0010302:25299-25318 None:intergenic 45.0%
GCCGAGTATCAGAAGTCATT+TGG + tig0010302:25505-25524 None:intergenic 45.0%
! GCTACATGGACCAGCTTTAA+TGG + tig0010302:25763-25782 None:intergenic 45.0%
TGCTCAATTGTGTGAGCTAG+TGG + tig0010302:25831-25850 None:intergenic 45.0%
TCACACAATTGAGCACGAAG+AGG - tig0010302:25836-25855 Msa1348330:intron 45.0%
! CATCTTCCTCAGCTTTGTAG+TGG - tig0010302:26326-26345 Msa1348330:intron 45.0%
GAACCACTGGAAACAAAGCA+GGG - tig0010302:26632-26651 Msa1348330:intron 45.0%
AACCACTGGAAACAAAGCAG+GGG - tig0010302:26633-26652 Msa1348330:intron 45.0%
GGGTGACAATTCAGGTCATT+CGG - tig0010302:26654-26673 Msa1348330:intron 45.0%
GGTGACAATTCAGGTCATTC+GGG - tig0010302:26655-26674 Msa1348330:intron 45.0%
! GATGGGCTTCAAATGCAAAC+TGG + tig0010302:26711-26730 None:intergenic 45.0%
TCTGAGAACCAAAACGCGAA+GGG + tig0010302:26816-26835 None:intergenic 45.0%
! TTCTGAGAACCAAAACGCGA+AGG + tig0010302:26817-26836 None:intergenic 45.0%
CTGAAGCACAAACGCTTACT+CGG - tig0010302:26863-26882 Msa1348330:CDS 45.0%
GGTGGATCTGTAACAGCTAT+AGG - tig0010302:26884-26903 Msa1348330:intron 45.0%
GATTTAGCGGTGAGGAGTTT+CGG + tig0010302:27176-27195 None:intergenic 45.0%
! CAACGTTTGATTTAGCGGTG+AGG + tig0010302:27184-27203 None:intergenic 45.0%
GATGTCTTGAAGTGCAACCA+GGG + tig0010302:27339-27358 None:intergenic 45.0%
TGATGTCTTGAAGTGCAACC+AGG + tig0010302:27340-27359 None:intergenic 45.0%
ATACCTGCTGCATTATCTGG+GGG + tig0010302:27415-27434 None:intergenic 45.0%
TTTGTTTATCCAGCATGGGG+AGG - tig0010302:27639-27658 Msa1348330:exon 45.0%
CTTATGAGAGAGCTGTAGCA+TGG - tig0010302:27669-27688 Msa1348330:five_prime_UTR 45.0%
!!! TTTAAATTTAAATATGATTT+TGG - tig0010302:27255-27274 Msa1348330:CDS 5.0%
! AGGATGATGGCAGTGAGTTC+AGG - tig0010302:22270-22289 Msa1348330:CDS 50.0%
AAGGTACACACCAGAGCAAG+TGG - tig0010302:22338-22357 Msa1348330:intron 50.0%
TCAAGTGCTTCCACTTGCTC+TGG + tig0010302:22351-22370 None:intergenic 50.0%
TGTTGCCTGCGAAGAGAAGT+TGG + tig0010302:22399-22418 None:intergenic 50.0%
GAGAAGCAGAGGAAAGAAGC+TGG - tig0010302:22602-22621 Msa1348330:CDS 50.0%
AGCAGAGGAAAGAAGCTGGA+AGG - tig0010302:22606-22625 Msa1348330:CDS 50.0%
TACTGGAACCGCTGTTGAGT+GGG - tig0010302:23342-23361 Msa1348330:intron 50.0%
CATTTGGACCCACTCAACAG+CGG + tig0010302:23353-23372 None:intergenic 50.0%
TAACCTTCATCCCGGGCATT+TGG + tig0010302:23369-23388 None:intergenic 50.0%
ATTCCAATGGAATCCGGACC+AGG + tig0010302:23903-23922 None:intergenic 50.0%
GCAATTTCTCATGGTTCCCC+TGG - tig0010302:23927-23946 Msa1348330:intron 50.0%
GTATCGTGATTGCCGAACTG+TGG - tig0010302:24125-24144 Msa1348330:CDS 50.0%
GTTGTATGCGCCAACAACTC+TGG - tig0010302:24329-24348 Msa1348330:intron 50.0%
! GCTGCGCTACACATCACTTT+TGG - tig0010302:24374-24393 Msa1348330:intron 50.0%
!! GCGCTACACATCACTTTTGG+AGG - tig0010302:24377-24396 Msa1348330:intron 50.0%
TTTGGAGGATGGCAGTCTTG+TGG - tig0010302:24392-24411 Msa1348330:intron 50.0%
! CTAACAAAATGCGGCACTGG+AGG + tig0010302:24578-24597 None:intergenic 50.0%
GCTCTAACAAAATGCGGCAC+TGG + tig0010302:24581-24600 None:intergenic 50.0%
!! AGAGCTGAAGTGTTGCCTAG+CGG - tig0010302:24596-24615 Msa1348330:CDS 50.0%
CTGATTAGACCCTGTGAAGG+AGG - tig0010302:24623-24642 Msa1348330:CDS 50.0%
GATTAGACCCTGTGAAGGAG+GGG - tig0010302:24625-24644 Msa1348330:CDS 50.0%
ATTAGACCCTGTGAAGGAGG+GGG - tig0010302:24626-24645 Msa1348330:CDS 50.0%
TGTTCTCTGAGCAAGCAGCA+TGG + tig0010302:24820-24839 None:intergenic 50.0%
GTTTCTCAGCCAAGTGTGAC+AGG - tig0010302:24979-24998 Msa1348330:intron 50.0%
TCAGCCAAGTGTGACAGGAT+GGG - tig0010302:24984-25003 Msa1348330:intron 50.0%
! ACAGAACTGGTGGTGACAGA+TGG + tig0010302:25286-25305 None:intergenic 50.0%
GTCCTTGTAGAATGTCCCTC+CGG - tig0010302:25662-25681 Msa1348330:intron 50.0%
TGCGGGAACACAGATCAGAA+TGG - tig0010302:25703-25722 Msa1348330:intron 50.0%
GCGGGAACACAGATCAGAAT+GGG - tig0010302:25704-25723 Msa1348330:intron 50.0%
TCAGCAGCTGCCATTAAAGC+TGG - tig0010302:25750-25769 Msa1348330:CDS 50.0%
! TCCTCAGCTTTGTAGTGGAG+TGG - tig0010302:26331-26350 Msa1348330:intron 50.0%
TCCACTCCACTACAAAGCTG+AGG + tig0010302:26335-26354 None:intergenic 50.0%
! GATGCACCCATTTTGCCTTC+TGG - tig0010302:26419-26438 Msa1348330:intron 50.0%
CTTGCCGTGCTAGATTCAAG+AGG + tig0010302:26458-26477 None:intergenic 50.0%
CAGAAGCAAGATCGAGTGTG+CGG + tig0010302:26600-26619 None:intergenic 50.0%
CGATCTTGCTTCTGCACTTG+AGG - tig0010302:26606-26625 Msa1348330:CDS 50.0%
CTTGCTTCTGCACTTGAGGT+TGG - tig0010302:26610-26629 Msa1348330:CDS 50.0%
GGAACCACTGGAAACAAAGC+AGG - tig0010302:26631-26650 Msa1348330:intron 50.0%
ACCACTGGAAACAAAGCAGG+GGG - tig0010302:26634-26653 Msa1348330:intron 50.0%
AAAGCAGGGGGTGACAATTC+AGG - tig0010302:26646-26665 Msa1348330:intron 50.0%
CTGAGAACCAAAACGCGAAG+GGG + tig0010302:26815-26834 None:intergenic 50.0%
GTTTGTGCTTCAGGAGTTCC+AGG + tig0010302:26856-26875 None:intergenic 50.0%
CGAGTAAGCGTTTGTGCTTC+AGG + tig0010302:26865-26884 None:intergenic 50.0%
AAGCACAAACGCTTACTCGG+TGG - tig0010302:26866-26885 Msa1348330:CDS 50.0%
CGCATCTGAGTGATGCCAAA+GGG + tig0010302:27073-27092 None:intergenic 50.0%
CCTTTGGCATCACTCAGATG+CGG - tig0010302:27071-27090 Msa1348330:intron 50.0%
TGACATGCTTGAAACCACCC+TGG - tig0010302:27319-27338 Msa1348330:intron 50.0%
ATTCCCCCAGATAATGCAGC+AGG - tig0010302:27409-27428 Msa1348330:intron 50.0%
ACAGACGACCCTTGCCACTA+CGG - tig0010302:23030-23049 Msa1348330:CDS 55.0%
ACTCGTGTCCGTAGTGGCAA+GGG + tig0010302:23041-23060 None:intergenic 55.0%
AACTCGTGTCCGTAGTGGCA+AGG + tig0010302:23042-23061 None:intergenic 55.0%
CTCACAACTCGTGTCCGTAG+TGG + tig0010302:23047-23066 None:intergenic 55.0%
GGACACGAGTTGTGAGTCAG+TGG - tig0010302:23051-23070 Msa1348330:CDS 55.0%
CTACTGGAACCGCTGTTGAG+TGG - tig0010302:23341-23360 Msa1348330:intron 55.0%
GTTGAGTGGGTCCAAATGCC+CGG - tig0010302:23355-23374 Msa1348330:intron 55.0%
TTGAGTGGGTCCAAATGCCC+GGG - tig0010302:23356-23375 Msa1348330:intron 55.0%
TAGCCTGGTCCGGATTCCAT+TGG - tig0010302:23897-23916 Msa1348330:CDS 55.0%
TTCTCATGGTTCCCCTGGAG+TGG - tig0010302:23932-23951 Msa1348330:intron 55.0%
TTGCAGGTTCAAGACCCACG+AGG + tig0010302:23974-23993 None:intergenic 55.0%
TCGTGGGTCTTGAACCTGCA+AGG - tig0010302:23973-23992 Msa1348330:intron 55.0%
CGTGGGTCTTGAACCTGCAA+GGG - tig0010302:23974-23993 Msa1348330:intron 55.0%
ATGGATCCCCCTCCTTCACA+GGG + tig0010302:24635-24654 None:intergenic 55.0%
TATGGATCCCCCTCCTTCAC+AGG + tig0010302:24636-24655 None:intergenic 55.0%
CTCAGCCAAGTGTGACAGGA+TGG - tig0010302:24983-25002 Msa1348330:intron 55.0%
CAGCCAAGTGTGACAGGATG+GGG - tig0010302:24985-25004 Msa1348330:intron 55.0%
CTTCCCCATCCTGTCACACT+TGG + tig0010302:24991-25010 None:intergenic 55.0%
CAAGTGTGACAGGATGGGGA+AGG - tig0010302:24989-25008 Msa1348330:intron 55.0%
GGCACATAGCACAGAACTGG+TGG + tig0010302:25296-25315 None:intergenic 55.0%
AGCCGGAGGGACATTCTACA+AGG + tig0010302:25667-25686 None:intergenic 55.0%
! CTGGTCCATGTAGCTTGCCA+GGG - tig0010302:25769-25788 Msa1348330:CDS 55.0%
! TGGTCCATGTAGCTTGCCAG+GGG - tig0010302:25770-25789 Msa1348330:CDS 55.0%
ACCACCAAAAGCTCCTGCTC+GGG + tig0010302:25796-25815 None:intergenic 55.0%
GACCACCAAAAGCTCCTGCT+CGG + tig0010302:25797-25816 None:intergenic 55.0%
!! AGCAGGAGCTTTTGGTGGTC+AGG - tig0010302:25797-25816 Msa1348330:CDS 55.0%
GCAAGATCGAGTGTGCGGTT+AGG + tig0010302:26595-26614 None:intergenic 55.0%
GCACTTGAGGTTGGAACCAC+TGG - tig0010302:26619-26638 Msa1348330:intron 55.0%
!! ACCCCCTGCTTTGTTTCCAG+TGG + tig0010302:26638-26657 None:intergenic 55.0%
! GCACTTTCCCCTTCGCGTTT+TGG - tig0010302:26805-26824 Msa1348330:intron 55.0%
TGTGCTTCAGGAGTTCCAGG+TGG + tig0010302:26853-26872 None:intergenic 55.0%
CCGCATCTGAGTGATGCCAA+AGG + tig0010302:27074-27093 None:intergenic 55.0%
GTCTTGAAGTGCAACCAGGG+TGG + tig0010302:27336-27355 None:intergenic 55.0%
CTGGGGGAATTCAGAGCACA+GGG + tig0010302:27399-27418 None:intergenic 55.0%
TCTGGGGGAATTCAGAGCAC+AGG + tig0010302:27400-27419 None:intergenic 55.0%
! AGTTATTGGCCTCCCCATGC+TGG + tig0010302:27651-27670 None:intergenic 55.0%
GTGGGCATATGCACCACCTA+TGG - tig0010302:27866-27885 Msa1348330:five_prime_UTR 55.0%
GCAGGTGCAGAGAGAAGCAG+AGG - tig0010302:22591-22610 Msa1348330:CDS 60.0%
CGGTCAGCAGCATCCACCAA+GGG - tig0010302:23081-23100 Msa1348330:CDS 60.0%
CAAGGGATGCAAGCCCTGCT+GGG - tig0010302:23098-23117 Msa1348330:CDS 60.0%
GGTCCAAATGCCCGGGATGA+AGG - tig0010302:23363-23382 Msa1348330:intron 60.0%
! CGACCTGGTGCCAGAGTTGT+TGG + tig0010302:24342-24361 None:intergenic 60.0%
AGCAACCAGAAGTCGCGACC+TGG + tig0010302:24357-24376 None:intergenic 60.0%
! TGCGGCACTGGAGGCATACT+AGG + tig0010302:24569-24588 None:intergenic 60.0%
GTGTGACAGGATGGGGAAGG+CGG - tig0010302:24992-25011 Msa1348330:intron 60.0%
CTAAGCGCACGTAGAGCTGC+AGG + tig0010302:25018-25037 None:intergenic 60.0%
! GCTGGTCCATGTAGCTTGCC+AGG - tig0010302:25768-25787 Msa1348330:CDS 60.0%
GGAGTGGACGAGCATGCAGT+TGG - tig0010302:26347-26366 Msa1348330:intron 60.0%
GCGGTCAGCAGCATCCACCA+AGG - tig0010302:23080-23099 Msa1348330:CDS 65.0%
GCAGGGCTTGCATCCCTTGG+TGG + tig0010302:23097-23116 None:intergenic 65.0%
CCAGCAGGGCTTGCATCCCT+TGG + tig0010302:23100-23119 None:intergenic 65.0%
CCAAGGGATGCAAGCCCTGC+TGG - tig0010302:23097-23116 Msa1348330:CDS 65.0%
AGGCACGTGCAGCCACTCCA+GGG + tig0010302:23947-23966 None:intergenic 65.0%
TTCAAGACCCACGAGGCCGC+AGG + tig0010302:23967-23986 None:intergenic 65.0%
GCGCCAACAACTCTGGCACC+AGG - tig0010302:24336-24355 Msa1348330:intron 65.0%
TGGCACCAGGTCGCGACTTC+TGG - tig0010302:24349-24368 Msa1348330:intron 65.0%
! GCCCGAGCAGGAGCTTTTGG+TGG - tig0010302:25792-25811 Msa1348330:CDS 65.0%
GGCACGTGCAGCCACTCCAG+GGG + tig0010302:23946-23965 None:intergenic 70.0%
CAGGCACGTGCAGCCACTCC+AGG + tig0010302:23948-23967 None:intergenic 70.0%
GGAGTGGCTGCACGTGCCTG+CGG - tig0010302:23948-23967 Msa1348330:intron 70.0%
CGGGCCCCTGGCAAGCTACA+TGG + tig0010302:25777-25796 None:intergenic 70.0%
AAAGCTCCTGCTCGGGCCCC+TGG + tig0010302:25789-25808 None:intergenic 70.0%
! GGGGCCCGAGCAGGAGCTTT+TGG - tig0010302:25789-25808 Msa1348330:CDS 70.0%
TGCACGTGCCTGCGGCCTCG+TGG - tig0010302:23956-23975 Msa1348330:intron 75.0%
GCACGTGCCTGCGGCCTCGT+GGG - tig0010302:23957-23976 Msa1348330:intron 75.0%
AGCTTGCCAGGGGCCCGAGC+AGG - tig0010302:25780-25799 Msa1348330:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0010302 gene 21995 27935 21995 ID=Msa1348330;Name=Msa1348330
tig0010302 mRNA 21995 27935 21995 ID=Msa1348330-mRNA-1;Parent=Msa1348330;Name=Msa1348330-mRNA-1;_AED=0.15;_eAED=0.15;_QI=256|0.88|0.89|1|0.94|0.89|19|175|827
tig0010302 exon 21995 22316 21995 ID=Msa1348330-mRNA-1:exon:6383;Parent=Msa1348330-mRNA-1
tig0010302 exon 22500 22649 22500 ID=Msa1348330-mRNA-1:exon:6382;Parent=Msa1348330-mRNA-1
tig0010302 exon 22817 22916 22817 ID=Msa1348330-mRNA-1:exon:6381;Parent=Msa1348330-mRNA-1
tig0010302 exon 23025 23350 23025 ID=Msa1348330-mRNA-1:exon:6380;Parent=Msa1348330-mRNA-1
tig0010302 exon 23443 23592 23443 ID=Msa1348330-mRNA-1:exon:6379;Parent=Msa1348330-mRNA-1
tig0010302 exon 23850 23930 23850 ID=Msa1348330-mRNA-1:exon:6378;Parent=Msa1348330-mRNA-1
tig0010302 exon 24112 24258 24112 ID=Msa1348330-mRNA-1:exon:6377;Parent=Msa1348330-mRNA-1
tig0010302 exon 24594 24789 24594 ID=Msa1348330-mRNA-1:exon:6376;Parent=Msa1348330-mRNA-1
tig0010302 exon 24878 24984 24878 ID=Msa1348330-mRNA-1:exon:6375;Parent=Msa1348330-mRNA-1
tig0010302 exon 25082 25156 25082 ID=Msa1348330-mRNA-1:exon:6374;Parent=Msa1348330-mRNA-1
tig0010302 exon 25245 25400 25245 ID=Msa1348330-mRNA-1:exon:6373;Parent=Msa1348330-mRNA-1
tig0010302 exon 25517 25600 25517 ID=Msa1348330-mRNA-1:exon:6372;Parent=Msa1348330-mRNA-1
tig0010302 exon 25724 25837 25724 ID=Msa1348330-mRNA-1:exon:6371;Parent=Msa1348330-mRNA-1
tig0010302 exon 25935 26030 25935 ID=Msa1348330-mRNA-1:exon:6370;Parent=Msa1348330-mRNA-1
tig0010302 exon 26546 26636 26546 ID=Msa1348330-mRNA-1:exon:6369;Parent=Msa1348330-mRNA-1
tig0010302 exon 26811 26896 26811 ID=Msa1348330-mRNA-1:exon:6368;Parent=Msa1348330-mRNA-1
tig0010302 exon 27176 27335 27176 ID=Msa1348330-mRNA-1:exon:6367;Parent=Msa1348330-mRNA-1
tig0010302 exon 27440 27752 27440 ID=Msa1348330-mRNA-1:exon:6366;Parent=Msa1348330-mRNA-1
tig0010302 exon 27775 27935 27775 ID=Msa1348330-mRNA-1:exon:6365;Parent=Msa1348330-mRNA-1
tig0010302 five_prime_UTR 27775 27935 27775 ID=Msa1348330-mRNA-1:five_prime_utr;Parent=Msa1348330-mRNA-1
tig0010302 five_prime_UTR 27658 27752 27658 ID=Msa1348330-mRNA-1:five_prime_utr;Parent=Msa1348330-mRNA-1
tig0010302 CDS 27440 27657 27440 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 27176 27335 27176 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 26811 26896 26811 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 26546 26636 26546 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 25935 26030 25935 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 25724 25837 25724 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 25517 25600 25517 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 25245 25400 25245 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 25082 25156 25082 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 24878 24984 24878 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 24594 24789 24594 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 24112 24258 24112 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 23850 23930 23850 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 23443 23592 23443 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 23025 23350 23025 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 22817 22916 22817 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 22500 22649 22500 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 CDS 22170 22316 22170 ID=Msa1348330-mRNA-1:cds;Parent=Msa1348330-mRNA-1
tig0010302 three_prime_UTR 21995 22169 21995 ID=Msa1348330-mRNA-1:three_prime_utr;Parent=Msa1348330-mRNA-1
Gene Sequence

>Msa1348330

ATGATGGCAGTGAGTTCAGGATGCAAAGATGGTAGCAAGATAGCAATGGACAATGGAAAGTACGTAAGGTACACACCAGAGCAAGTGGAAGCACTTGAAAGACTCTACCATGAATGTCCAAAACCAACTTCTCTTCGCAGGCAACAACTCATTAGAGAGTGTCCTATTCTCTCTCATATTGAACCTAAACAGATCAAAGTTTGGTTCCAGAACAGAAGGTGCAGAGAGAAGCAGAGGAAAGAAGCTGGAAGGTTACAAGCTGTGAACAGAAAGTTAACAGCAATGAACAAACTGCTTATGGAGGAAAATGATAGATTGCAGAAACAAGTGTCACAACTTGTGTATGAGAACACGTTTTTCCGCCAACATACACAAAATACGACCCTTGCCACTACGGACACGAGTTGTGAGTCAGTGGTAACAAGCGGTCAGCAGCATCCACCAAGGGATGCAAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACTTTAGCAGAGTTTCTATCAAAGGCTACTGGAACCGCTGTTGAGTGGGTCCAAATGCCCGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATTTCTCATGGTTCCCCTGGAGTGGCTGCACGTGCCTGCGGCCTCGTGGGTCTTGAACCTGCAAGGGTTGCTGAAATCCTCAAAGATAGGCTCTCATGGTATCGTGATTGCCGAACTGTGGATGTTCTAAATGTTATGTCCACAGGAAATGGAGGAACCATTGAATTGCTTTACATGCAGTTGTATGCGCCAACAACTCTGGCACCAGGTCGCGACTTCTGGTTGCTGCGCTACACATCACTTTTGGAGGATGGCAGTCTTGTGGTGTGTGAAAGATCACTTAACAACACACAGAATGGTCCTAGTATGCCTCCAGTGCCGCATTTTGTTAGAGCTGAAGTGTTGCCTAGCGGTTATCTGATTAGACCCTGTGAAGGAGGGGGATCCATAATTCATATTGTTGATCATATGCTTTTAGAGCCTTGGAGTGTGCCTGAAGTTTTGCGCCCACTTTATGAGTCATCCATGCTGCTTGCTCAGAGAACAACTATGGCAGCTTTACGTCATTTAAGGCAGATTTCTCAAGAAGTTTCTCAGCCAAGTGTGACAGGATGGGGAAGGCGGCCTGCAGCTCTACGTGCGCTTAGTCAAAGATTGAGCAAGGGATTCAACGAAGCTGTCAACGGGTTTACAGATGATGGATGGTCTATGTTAGATAGTGATGGAATTGATGATGTCACCCTTCTTGTGAATTCATCACCTAGCAAGATGATGGGACTAAATCTTGGTTATAACAATGGATTTCCATCTGTCACCACCAGTTCTGTGCTATGTGCCAAAGCTTCCATGTTGTTACAGAATGTCCCTCCGGCTATTCTTCTTAGATTTTTGCGGGAACACAGATCAGAATGGGCAGATACAAGTATTGATGCTTATTCAGCAGCTGCCATTAAAGCTGGTCCATGTAGCTTGCCAGGGGCCCGAGCAGGAGCTTTTGGTGGTCAGTTCATGGAGGTTATCAAGCTTGAGAACATGGGCTACTATAGGGATGATATTACAATGCCTGGTGATATTTTCCTCTTACAACTTTGTAGTGGAGTGGACGAGCATGCAGTTGGCACAAGTGCAGAGCTTATTTTTGCTCCAATTGATGCATCTTTCTCTGATGATGCACCCATTTTGCCTTCTGGTTTTCGTATCATACCTCTTGAATCTAGCACGGCAAGTCTTCTTTATGATGCTGCTAGTCCTAACCGCACACTCGATCTTGCTTCTGCACTTGAGGTTGGAACCACTGGAAACAAAGCAGGGGGTGACAATTCAGGTCATTCGGGCAACACAAAATCTGTGATGACAATAGCGTTCCAGTTTGCATTTGAAGCCCATCTTCAAGATAATATCGCAGCTATGGCGCGACAGTATGTGCGTAGCATTGTTGCATCTGTTCAGAGAGTTTCATTAGCACTTTCCCCTTCGCGTTTTGGTTCTCAGAATGCTTTTCACTTACCACCTGGAACTCCTGAAGCACAAACGCTTACTCGGTGGATCTGTAACAGCTATAGATTCTATCTAGGCGCAGAACTACTTAAATGTGAAGGGAGTGAATCGATACTTAAATCCCTTTGGCATCACTCAGATGCGGTTCTGTGTTGCTCTTTAAAGGCATTACCCGTTTTTACGTTTGCGAATCAAGCTGGACTTGACATGCTTGAAACCACCCTGGTTGCACTTCAAGACATCACCCTAGAAAAGATATTTGATGACAATGGAAAGAAAACCCTGTGCTCTGAATTCCCCCAGATAATGCAGCAGGGTTTCATGTGTATTCAAGGTGGTATTTGTTTATCCAGCATGGGGAGGCCAATAACTTATGAGAGAGCTGTAGCATGGAAAGTATTGAACGAAGAAGAATCTGCTCATTGCATCTGTTTCATGTTCATCAATTGGTCTTTTGTCTAG

Protein sequence

>Msa1348330

MMAVSSGCKDGSKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQHTQNTTLATTDTSCESVVTSGQQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLSWYRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPSMPPVPHFVRAEVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFTDDGWSMLDSDGIDDVTLLVNSSPSKMMGLNLGYNNGFPSVTTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADTSIDAYSAAAIKAGPCSLPGARAGAFGGQFMEVIKLENMGYYRDDITMPGDIFLLQLCSGVDEHAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLESSTASLLYDAASPNRTLDLASALEVGTTGNKAGGDNSGHSGNTKSVMTIAFQFAFEAHLQDNIAAMARQYVRSIVASVQRVSLALSPSRFGSQNAFHLPPGTPEAQTLTRWICNSYRFYLGAELLKCEGSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCIQGGICLSSMGRPITYERAVAWKVLNEEESAHCICFMFINWSFV*