AlfalfaGEDB | Msa1134770

M. sativa cultivar zhongmu-4 / Msa1134770

KEGG: -
GO: GO:0001101 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009739 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03195.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134770	XP_013447443.1	96.678	301	10	0	1	301	1	301	0.0	596

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134770	sp\|Q9M886\|LBD41_ARATH	60.000	285	70	4	1	281	1	245	1.09e-111	327

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134770	A0A072TVI9	96.678	301	10	0	1	301	1	301	0.0	596

TFs/TRs:

Gene ID	Type	Classification
Msa1134770	TF	LOB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0036550	Msa1134770	0.804745	1.863700e-49	-8.615850e-47
Msa0043840	Msa1134770	0.857678	1.385991e-62	-8.615850e-47
Msa0090500	Msa1134770	0.847991	8.142640e-60	-8.615850e-47
Msa0104740	Msa1134770	0.809831	1.557947e-50	-8.615850e-47
Msa0604640	Msa1134770	-0.806048	9.936618e-50	-8.615850e-47
Msa0621780	Msa1134770	-0.820630	6.196060e-53	-8.615850e-47
Msa0623040	Msa1134770	0.806317	8.725324e-50	-8.615850e-47
Msa0704780	Msa1134770	-0.812470	4.170955e-51	-8.615850e-47
Msa0705810	Msa1134770	-0.806311	8.748718e-50	-8.615850e-47
Msa0708020	Msa1134770	0.804380	2.221186e-49	-8.615850e-47
Msa0715510	Msa1134770	0.837079	6.422442e-57	-8.615850e-47
Msa0756440	Msa1134770	-0.808139	3.586440e-50	-8.615850e-47
Msa0795710	Msa1134770	-0.821270	4.413981e-53	-8.615850e-47
Msa0797950	Msa1134770	0.801912	7.197692e-49	-8.615850e-47
Msa0833450	Msa1134770	-0.812018	5.236697e-51	-8.615850e-47
Msa0137970	Msa1134770	0.844110	9.259200e-59	-8.615850e-47
Msa0161960	Msa1134770	0.802592	5.214873e-49	-8.615850e-47
Msa0183920	Msa1134770	0.837580	4.780571e-57	-8.615850e-47
Msa0228690	Msa1134770	0.812188	4.806889e-51	-8.615850e-47
Msa0230980	Msa1134770	-0.825065	5.743178e-54	-8.615850e-47
Msa0372100	Msa1134770	0.801411	9.118940e-49	-8.615850e-47
Msa0430040	Msa1134770	-0.801479	8.831002e-49	-8.615850e-47
Msa0432200	Msa1134770	0.801102	1.054793e-48	-8.615850e-47
Msa0434090	Msa1134770	0.809644	1.708761e-50	-8.615850e-47
Msa0477900	Msa1134770	0.807907	4.017794e-50	-8.615850e-47
Msa0481050	Msa1134770	-0.801658	8.115998e-49	-8.615850e-47
Msa0999480	Msa1134770	-0.804493	2.104134e-49	-8.615850e-47
Msa1040330	Msa1134770	0.806407	8.349076e-50	-8.615850e-47
Msa1047320	Msa1134770	0.955623	1.976444e-113	-8.615850e-47
Msa1057620	Msa1134770	-0.801887	7.282660e-49	-8.615850e-47
Msa1067910	Msa1134770	-0.801047	1.082498e-48	-8.615850e-47
Msa1078300	Msa1134770	0.829623	4.641283e-55	-8.615850e-47
Msa1085560	Msa1134770	0.817206	3.719051e-52	-8.615850e-47
Msa1101300	Msa1134770	-0.803145	4.007683e-49	-8.615850e-47
Msa0267710	Msa1134770	0.802736	4.869720e-49	-8.615850e-47
Msa0270460	Msa1134770	-0.826614	2.462760e-54	-8.615850e-47
Msa0309060	Msa1134770	-0.808273	3.359063e-50	-8.615850e-47
Msa0336520	Msa1134770	0.804351	2.252548e-49	-8.615850e-47
Msa1130770	Msa1134770	0.809062	2.277701e-50	-8.615850e-47
Msa1134740	Msa1134770	0.878758	2.167275e-69	-8.615850e-47
Msa1134770	Msa1150860	0.817376	3.404868e-52	-8.615850e-47
Msa1134770	Msa1165860	0.801145	1.033570e-48	-8.615850e-47
Msa1134770	Msa1211260	-0.800975	1.119650e-48	-8.615850e-47
Msa1134770	Msa1220720	0.804920	1.713212e-49	-8.615850e-47
Msa1134770	Msa1265570	0.805722	1.163800e-49	-8.615850e-47
Msa1134770	Msa1286950	-0.805113	1.561667e-49	-8.615850e-47
Msa1134770	Msa1288970	-0.809693	1.667727e-50	-8.615850e-47
Msa1134770	Msa1334670	0.807640	4.580401e-50	-8.615850e-47
Msa1134770	Msa1335500	0.808996	2.353934e-50	-8.615850e-47
Msa1134770	Msa1342560	0.863414	2.533110e-64	-8.615850e-47
Msa1134770	Msa1348330	0.833730	4.508721e-56	-8.615850e-47
Msa1134770	Msa1349850	-0.819670	1.028243e-52	-8.615850e-47
Msa1134770	Msa1356450	0.809683	1.676064e-50	-8.615850e-47
Msa1134770	Msa1362590	0.810194	1.301043e-50	-8.615850e-47
Msa1134770	Msa1363690	0.823226	1.552271e-53	-8.615850e-47
Msa1134770	Msa1365230	0.807271	5.482746e-50	-8.615850e-47
Msa1134770	Msa1369180	-0.808759	2.644381e-50	-8.615850e-47
Msa1134770	Msa1371800	0.803939	2.744187e-49	-8.615850e-47
Msa1134770	Msa1396550	0.829957	3.849167e-55	-8.615850e-47
Msa1134770	Msa1403950	-0.802833	4.650159e-49	-8.615850e-47
Msa1134770	Msa1407210	0.800255	1.570376e-48	-8.615850e-47
Msa1134770	Msa1409060	0.804776	1.836063e-49	-8.615850e-47
Msa1134770	Msa1421540	0.813318	2.719761e-51	-8.615850e-47
Msa1134770	Msa1427600	-0.800802	1.215056e-48	-8.615850e-47
Msa1134770	Msa1434700	0.816368	5.734159e-52	-8.615850e-47
Msa1134770	Msa1447900	0.833578	4.919413e-56	-8.615850e-47
Msa0521580	Msa1134770	0.803359	3.619043e-49	-8.615850e-47
Msa0521940	Msa1134770	0.830000	3.757740e-55	-8.615850e-47
Msa0541940	Msa1134770	0.802295	6.004157e-49	-8.615850e-47
Msa0575950	Msa1134770	0.815068	1.116920e-51	-8.615850e-47
Msa0580540	Msa1134770	-0.816993	4.152282e-52	-8.615850e-47
Msa0876230	Msa1134770	0.810689	1.017583e-50	-8.615850e-47
Msa0930950	Msa1134770	-0.815577	8.607535e-52	-8.615850e-47
Msa0931370	Msa1134770	0.858607	7.335610e-63	-8.615850e-47
Msa0941520	Msa1134770	0.841525	4.507873e-58	-8.615850e-47
Msa0970040	Msa1134770	0.809741	1.628681e-50	-8.615850e-47
Msa0970100	Msa1134770	0.818040	2.412273e-52	-8.615850e-47
Msa0978530	Msa1134770	0.825699	4.065684e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134770	MtrunA17_Chr7g0215281	96.678	301	10	0	1	301	1	301	0.0	596
Msa1134770	MtrunA17_Chr6g0457431	80.625	160	26	2	1	160	1	155	3.45e-91	268
Msa1134770	MtrunA17_Chr6g0469271	44.395	223	114	4	1	213	1	223	1.45e-57	184
Msa1134770	MtrunA17_Chr4g0053911	61.417	127	46	1	3	129	1	124	1.63e-54	177
Msa1134770	MtrunA17_Chr6g0470651	51.149	174	68	6	1	164	1	167	1.16e-52	172
Msa1134770	MtrunA17_Chr5g0401401	64.545	110	39	0	3	112	1	110	6.17e-52	170
Msa1134770	MtrunA17_Chr6g0470631	50.575	174	69	6	1	164	1	167	1.63e-51	169
Msa1134770	MtrunA17_Chr1g0207471	60.577	104	41	0	3	106	1	104	8.10e-45	150
Msa1134770	MtrunA17_Chr1g0209841	42.029	207	98	5	1	196	1	196	9.61e-45	151

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134770	AT3G02550.1	60.000	285	70	4	1	281	1	245	1.10e-112	327
Msa1134770	AT1G67100.1	82.270	141	22	2	1	138	1	141	1.64e-82	249
Msa1134770	AT1G68510.1	62.941	170	53	2	1	160	1	170	4.17e-74	227
Msa1134770	AT3G49940.1	70.000	110	33	0	3	112	1	110	4.17e-55	179
Msa1134770	AT5G67420.2	65.455	110	38	0	3	112	1	110	5.61e-54	176
Msa1134770	AT5G67420.1	65.455	110	38	0	3	112	1	110	5.61e-54	176
Msa1134770	AT4G37540.1	66.667	111	37	0	3	113	1	111	4.33e-53	174

Find 115 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTATCTTGTTCCACAAATT+TGG	0.171439	7_4:-1409589	Msa1134770:five_prime_UTR
GTGGCATTAGCTTGTGATTC+AGG	0.204656	7_4:+1409147	None:intergenic
AAACCGACTGAACCGTAAAT+TGG	0.257065	7_4:+1408722	None:intergenic
GGCTCATGGAATGTGGAGTT+GGG	0.290152	7_4:-1408095	Msa1134770:CDS
TTTCCACATTCAGGCAGGTT+GGG	0.291826	7_4:+1409548	None:intergenic
GGTTTGGCTTGGTTCGGTTT+TGG	0.303637	7_4:-1408049	Msa1134770:three_prime_UTR
ACTTTCTCATCTACATAGTT+TGG	0.307581	7_4:+1407856	None:intergenic
ACCAGCACGACCGTAGAATT+TGG	0.324902	7_4:+1409113	None:intergenic
TGGAGAGGAAAAGGTTGGTT+TGG	0.330903	7_4:-1408207	Msa1134770:CDS
GCAGCTGCTTCCGAAGTTAT+TGG	0.331265	7_4:+1408629	None:intergenic
TGTAAGTTGTAACAACTTGA+TGG	0.341415	7_4:+1407816	None:intergenic
TTGACATAGCTGCCAGCTTC+CGG	0.350615	7_4:+1408691	None:intergenic
TATCCGGCTTAGACCGGGTT+TGG	0.359852	7_4:-1408065	Msa1134770:exon
CTCTCACCGGTTCGGTCAAC+CGG	0.370315	7_4:+1408230	None:intergenic
CGAATAGTGAATCCAATTTA+CGG	0.370383	7_4:-1408734	Msa1134770:CDS
GTTGGTTTGGAGCTGACTCT+TGG	0.373923	7_4:-1408194	Msa1134770:CDS
CTCTTCTTGTATCTTCGGCT+TGG	0.390746	7_4:+1408478	None:intergenic
GGAGTTGGGGCTTCAATATC+CGG	0.399627	7_4:-1408081	Msa1134770:CDS
GAAAAGAAGGGTTGTATTGA+AGG	0.400262	7_4:-1408129	Msa1134770:CDS
TGGCTCATGGAATGTGGAGT+TGG	0.402516	7_4:-1408096	Msa1134770:CDS
CCTCTCCACTCTCACCGGTT+CGG	0.407185	7_4:+1408222	None:intergenic
TTGGTTTGGAGCTGACTCTT+GGG	0.407357	7_4:-1408193	Msa1134770:CDS
GATCTTATTTAGAGATGAAC+CGG	0.409879	7_4:-1408273	Msa1134770:CDS
GGCTTAGACCGGGTTTGGCT+TGG	0.414881	7_4:-1408060	Msa1134770:exon
GTCTGAGGCGGTTGCGTTGG+TGG	0.415235	7_4:-1408333	Msa1134770:CDS
AGACCGGGTTTGGCTTGGTT+CGG	0.417093	7_4:-1408055	Msa1134770:three_prime_UTR
CGGTTCATCACCTCTTCAAC+CGG	0.419225	7_4:+1408389	None:intergenic
CGACACATGACGGATGTCAT+AGG	0.427071	7_4:+1408580	None:intergenic
GTTTATTATGGTCCGGAAGC+TGG	0.428216	7_4:-1408703	Msa1134770:CDS
ACCGATCGGTTCGGTTGAAC+CGG	0.429864	7_4:-1408408	Msa1134770:CDS
TTCCACATTCAGGCAGGTTG+GGG	0.431458	7_4:+1409549	None:intergenic
ACCGATCGGTTCAGTTGAAC+CGG	0.432038	7_4:+1408421	None:intergenic
CTTCAATATCCGGCTTAGAC+CGG	0.432623	7_4:-1408071	Msa1134770:exon
GCTGACTCTTGGGTTTGAAC+CGG	0.433502	7_4:-1408183	Msa1134770:CDS
ACGGTTCAGTCGGTTTATTA+TGG	0.442488	7_4:-1408715	Msa1134770:CDS
CGGTGAGAGTGGAGAGGAAA+AGG	0.443712	7_4:-1408216	Msa1134770:CDS
CGAACCTGGACGAAGATGTT+CGG	0.443982	7_4:+1409065	None:intergenic
TGGCATTAGCTTGTGATTCA+GGG	0.445704	7_4:+1409148	None:intergenic
GAACCTGGACGAAGATGTTC+GGG	0.446611	7_4:+1409066	None:intergenic
GTATTGAAGGATTGTGGTGT+TGG	0.451012	7_4:-1408116	Msa1134770:CDS
CTTCGGAAGCAGCTGCTAAC+GGG	0.456571	7_4:-1408622	Msa1134770:CDS
GCCAAATTCTACGGTCGTGC+TGG	0.457716	7_4:-1409114	Msa1134770:CDS
TTCAATATCCGGCTTAGACC+GGG	0.462376	7_4:-1408070	Msa1134770:exon
CCAGTCTGAGGCGGTTGCGT+TGG	0.463877	7_4:-1408336	Msa1134770:CDS
GAAGCAGCTGCTAACGGGAG+GGG	0.464479	7_4:-1408617	Msa1134770:CDS
ACATGATAAACACGTGAAAC+CGG	0.466817	7_4:+1408164	None:intergenic
GTGTTTCTCGCCAAATTCTA+CGG	0.467341	7_4:-1409123	Msa1134770:CDS
GAGAGTGGAGAGGAAAAGGT+TGG	0.474231	7_4:-1408212	Msa1134770:CDS
GAGAACAAGGGATTTGAATC+CGG	0.474733	7_4:-1408440	Msa1134770:CDS
ATGAAGCCGGTTGACCGAAC+CGG	0.475639	7_4:-1408236	Msa1134770:CDS
GAGGCGGTTGCGTTGGTGGA+TGG	0.487638	7_4:-1408329	Msa1134770:CDS
ATTTAGAGATGAACCGGAGT+TGG	0.489333	7_4:-1408267	Msa1134770:CDS
AAAGAGTAGTAATGAGAACA+AGG	0.495367	7_4:-1408453	Msa1134770:CDS
TGGTTCCTGTGAAGAAAAGA+AGG	0.496741	7_4:-1408142	Msa1134770:CDS
AAGCCAAACCCGGTCTAAGC+CGG	0.498806	7_4:+1408062	None:intergenic
TGCATATGATGATGCATCAA+TGG	0.501398	7_4:+1407788	None:intergenic
TTCAACTGAACCGATCGGTT+CGG	0.501566	7_4:-1408417	Msa1134770:CDS
TCCGAAGTTATTGGTGTGAT+CGG	0.501864	7_4:+1408638	None:intergenic
ATGTCATAGGCTTTGAGTGG+TGG	0.508004	7_4:+1408593	None:intergenic
GAGATGAACCGGAGTTGGAC+CGG	0.508299	7_4:-1408262	Msa1134770:CDS
TGTAGATGAGAAAGTACATT+CGG	0.513037	7_4:-1407848	Msa1134770:three_prime_UTR
GACTCTTTGTTGAGTTAACT+CGG	0.513097	7_4:+1408532	None:intergenic
TCAAGTTGTTACAACTTACA+AGG	0.514711	7_4:-1407813	Msa1134770:three_prime_UTR
CCAACGCAACCGCCTCAGAC+TGG	0.515999	7_4:+1408336	None:intergenic
AGGATTGTGGTGTTGGCTCA+TGG	0.516288	7_4:-1408109	Msa1134770:CDS
GTTCGGGACCGGCGTTAACA+AGG	0.520425	7_4:+1409082	None:intergenic
GAAGTAAACAACCAAATTTG+TGG	0.529591	7_4:+1409578	None:intergenic
GTTGACCGAACCGGTGAGAG+TGG	0.534361	7_4:-1408227	Msa1134770:CDS
ACTTCGGAAGCAGCTGCTAA+CGG	0.537457	7_4:-1408623	Msa1134770:CDS
ACGACTCATGACTCGCTGAT+CGG	0.538209	7_4:+1408369	None:intergenic
TGTCATAGGCTTTGAGTGGT+GGG	0.543552	7_4:+1408594	None:intergenic
GGTTGTAGAGTACTAAGAAA+AGG	0.544678	7_4:-1409219	Msa1134770:CDS
GCTCATGGAATGTGGAGTTG+GGG	0.544869	7_4:-1408094	Msa1134770:CDS
AACCCCAACCTGCCTGAATG+TGG	0.546066	7_4:-1409551	Msa1134770:five_prime_UTR
AAAATATGGGAAAGAAAGAA+GGG	0.546091	7_4:+1409354	None:intergenic
TTCGGTTGAACCGGTTGAAG+AGG	0.550448	7_4:-1408399	Msa1134770:CDS
GGTCCCGAACATCTTCGTCC+AGG	0.558956	7_4:-1409069	Msa1134770:intron
AAGAAAACACTAACAAAATG+AGG	0.561350	7_4:-1407726	None:intergenic
TCAGTCGGTTTATTATGGTC+CGG	0.563725	7_4:-1408710	Msa1134770:CDS
TGGACGAAGATGTTCGGGAC+CGG	0.564250	7_4:+1409071	None:intergenic
TCTAGTACCTGAAAATCCAT+TGG	0.565036	7_4:-1409421	Msa1134770:five_prime_UTR
GGAAGCAGCTGCTAACGGGA+GGG	0.580906	7_4:-1408618	Msa1134770:CDS
AATCCAATTTACGGTTCAGT+CGG	0.582091	7_4:-1408725	Msa1134770:CDS
CTCAACAAAGAGTCAAGACT+CGG	0.582942	7_4:-1408523	Msa1134770:CDS
TGGTGTTGGCTCATGGAATG+TGG	0.583661	7_4:-1408102	Msa1134770:CDS
GGTTTCACGTGTTTATCATG+TGG	0.585512	7_4:-1408162	Msa1134770:CDS
GCATAAGACCTTGTTTACAA+TGG	0.593219	7_4:-1409179	Msa1134770:CDS
AAACCGAACCAAGCCAAACC+CGG	0.593382	7_4:+1408052	None:intergenic
TGACATCCGTCATGTGTCGA+AGG	0.595504	7_4:-1408576	Msa1134770:CDS
CTGGCAGCTATGTCAAGCCG+CGG	0.599587	7_4:-1408684	Msa1134770:CDS
TTTCCTCCTTCGACACATGA+CGG	0.600098	7_4:+1408570	None:intergenic
ACCGGTTCAACCGAACCGAT+CGG	0.600875	7_4:+1408407	None:intergenic
GCAGCTATGTCAAGCCGCGG+TGG	0.604170	7_4:-1408681	Msa1134770:CDS
TCAAGACTCGGTCGCGTAAG+CGG	0.609713	7_4:-1408511	Msa1134770:CDS
AGGGTTGTATTGAAGGATTG+TGG	0.614044	7_4:-1408122	Msa1134770:CDS
TGTGTCGAAGGAGGAAAACT+CGG	0.616290	7_4:-1408564	Msa1134770:CDS
AAAATGCGGATGAGTTGTAA+CGG	0.616520	7_4:-1409240	Msa1134770:CDS
GCCGATCACACCAATAACTT+CGG	0.617983	7_4:-1408639	Msa1134770:CDS
GTCGATTAGCCACCAGTCTG+AGG	0.618436	7_4:-1408348	Msa1134770:CDS
GTAGAATTTGGCGAGAAACA+CGG	0.619114	7_4:+1409125	None:intergenic
CAAGCCGAAGATACAAGAAG+AGG	0.623975	7_4:-1408477	Msa1134770:CDS
GTTGGACCGGAAAATGAAGC+CGG	0.627386	7_4:-1408249	Msa1134770:CDS
CATCCGTCATGTGTCGAAGG+AGG	0.629554	7_4:-1408573	Msa1134770:CDS
AAGAGTAGTAATGAGAACAA+GGG	0.634462	7_4:-1408452	Msa1134770:CDS
CAAGTTGTTACAACTTACAA+GGG	0.635758	7_4:-1407812	Msa1134770:three_prime_UTR
ACGCAACCGCCTCAGACTGG+TGG	0.636669	7_4:+1408339	None:intergenic
TTGAGTTAACTCGGTCGACG+CGG	0.651446	7_4:+1408541	None:intergenic
CTCATGAACCTTGTTAACGC+CGG	0.654635	7_4:-1409090	Msa1134770:CDS
TCCGGTTCAACTGAACCGAT+CGG	0.657777	7_4:-1408422	Msa1134770:CDS
TCGTTGTTGTACGAAGCATG+TGG	0.660850	7_4:-1408758	Msa1134770:CDS
CCGAACCGGTGAGAGTGGAG+AGG	0.672740	7_4:-1408222	Msa1134770:CDS
GATTAGCCACCAGTCTGAGG+CGG	0.698548	7_4:-1408345	Msa1134770:CDS
CGGATGTCATAGGCTTTGAG+TGG	0.702654	7_4:+1408590	None:intergenic
GGTTCCTGTGAAGAAAAGAA+GGG	0.756021	7_4:-1408141	Msa1134770:CDS
GAATTTGGCGAGAAACACGG+TGG	0.783343	7_4:+1409128	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATATATGTAATTTTGTTA+AGG	+	chr7_4:1408338-1408357	None:intergenic	10.0%
!!!	TTATATATGTAATTTTGTTA+AGG	+	chr7_4:1408338-1408357	None:intergenic	10.0%
!!!	AAATCTTTTATTTTCTCAAT+TGG	-	chr7_4:1408033-1408052	Msa1134770:three_prime_UTR	15.0%
!!!	AATCTTTTATTTTCTCAATT+GGG	-	chr7_4:1408034-1408053	Msa1134770:three_prime_UTR	15.0%
!!!	GAAAATTTTCATTAAAAATG+CGG	-	chr7_4:1408062-1408081	Msa1134770:exon	15.0%
!!	GTAAACAAAAAGTTATTAAA+AGG	+	chr7_4:1409391-1409410	None:intergenic	15.0%
!!!	ATAACTTTTTGTTTACATTT+TGG	-	chr7_4:1409395-1409414	Msa1134770:five_prime_UTR	15.0%
!!!	TAACTTTTTGTTTACATTTT+GGG	-	chr7_4:1409396-1409415	Msa1134770:five_prime_UTR	15.0%
!!!	AAATCTTTTATTTTCTCAAT+TGG	-	chr7_4:1408033-1408052	Msa1134770:three_prime_UTR	15.0%
!!!	AATCTTTTATTTTCTCAATT+GGG	-	chr7_4:1408034-1408053	Msa1134770:three_prime_UTR	15.0%
!!!	GAAAATTTTCATTAAAAATG+CGG	-	chr7_4:1408062-1408081	Msa1134770:exon	15.0%
!!	GTAAACAAAAAGTTATTAAA+AGG	+	chr7_4:1409391-1409410	None:intergenic	15.0%
!!!	ATAACTTTTTGTTTACATTT+TGG	-	chr7_4:1409395-1409414	Msa1134770:five_prime_UTR	15.0%
!!!	TAACTTTTTGTTTACATTTT+GGG	-	chr7_4:1409396-1409415	Msa1134770:five_prime_UTR	15.0%
!!	ATTGTGTCTATGAAAAATAT+GGG	+	chr7_4:1407978-1407997	None:intergenic	20.0%
!!	GAAAAATTAGACTTTGATAT+AGG	+	chr7_4:1408007-1408026	None:intergenic	20.0%
!!!	ACAAATATATCAACTTTTGT+TGG	+	chr7_4:1408427-1408446	None:intergenic	20.0%
!!	ATTAAAAACTAAACAAGAAC+TGG	+	chr7_4:1409359-1409378	None:intergenic	20.0%
!!	ATTGTGTCTATGAAAAATAT+GGG	+	chr7_4:1407978-1407997	None:intergenic	20.0%
!!	GAAAAATTAGACTTTGATAT+AGG	+	chr7_4:1408007-1408026	None:intergenic	20.0%
!!!	ACAAATATATCAACTTTTGT+TGG	+	chr7_4:1408427-1408446	None:intergenic	20.0%
!!	ATTAAAAACTAAACAAGAAC+TGG	+	chr7_4:1409359-1409378	None:intergenic	20.0%
!	TTTATCTTGTTCCACAAATT+TGG	-	chr7_4:1407727-1407746	Msa1134770:three_prime_UTR	25.0%
!	TGTGTTTACTATAAAAACCA+TGG	+	chr7_4:1407796-1407815	None:intergenic	25.0%
!	AAAATATGGGAAAGAAAGAA+GGG	+	chr7_4:1407965-1407984	None:intergenic	25.0%
!	AAAAATATGGGAAAGAAAGA+AGG	+	chr7_4:1407966-1407985	None:intergenic	25.0%
!	GATTGTGTCTATGAAAAATA+TGG	+	chr7_4:1407979-1407998	None:intergenic	25.0%
!	ATCTCTCTATAAGAAAAAGT+TGG	-	chr7_4:1408400-1408419	Msa1134770:CDS	25.0%
!	TTTATCTTGTTCCACAAATT+TGG	-	chr7_4:1407727-1407746	Msa1134770:three_prime_UTR	25.0%
!	TGTGTTTACTATAAAAACCA+TGG	+	chr7_4:1407796-1407815	None:intergenic	25.0%
!	AAAATATGGGAAAGAAAGAA+GGG	+	chr7_4:1407965-1407984	None:intergenic	25.0%
!	AAAAATATGGGAAAGAAAGA+AGG	+	chr7_4:1407966-1407985	None:intergenic	25.0%
!	GATTGTGTCTATGAAAAATA+TGG	+	chr7_4:1407979-1407998	None:intergenic	25.0%
!	ATCTCTCTATAAGAAAAAGT+TGG	-	chr7_4:1408400-1408419	Msa1134770:CDS	25.0%
	GAAGTAAACAACCAAATTTG+TGG	+	chr7_4:1407741-1407760	None:intergenic	30.0%
!!!	ATTTTCAGGTACTAGATTGT+GGG	+	chr7_4:1407891-1407910	None:intergenic	30.0%
!	CTTTTGATCCATTGTAAACA+AGG	+	chr7_4:1408148-1408167	None:intergenic	30.0%
	GTATTGCATGTTTGGATAAA+CGG	+	chr7_4:1408376-1408395	None:intergenic	30.0%
	CGAATAGTGAATCCAATTTA+CGG	-	chr7_4:1408582-1408601	Msa1134770:CDS	30.0%
!	TTTTCCTCTTCTTGTATCTT+CGG	+	chr7_4:1408846-1408865	None:intergenic	30.0%
	AAAGAGTAGTAATGAGAACA+AGG	-	chr7_4:1408863-1408882	Msa1134770:intron	30.0%
	AAGAGTAGTAATGAGAACAA+GGG	-	chr7_4:1408864-1408883	Msa1134770:intron	30.0%
!	GATCTTATTTAGAGATGAAC+CGG	-	chr7_4:1409043-1409062	Msa1134770:intron	30.0%
	ACTTTCTCATCTACATAGTT+TGG	+	chr7_4:1409463-1409482	None:intergenic	30.0%
!	TGTAGATGAGAAAGTACATT+CGG	-	chr7_4:1409468-1409487	Msa1134770:five_prime_UTR	30.0%
	TGTAAGTTGTAACAACTTGA+TGG	+	chr7_4:1409503-1409522	None:intergenic	30.0%
!	TCAAGTTGTTACAACTTACA+AGG	-	chr7_4:1409503-1409522	Msa1134770:five_prime_UTR	30.0%
	CAAGTTGTTACAACTTACAA+GGG	-	chr7_4:1409504-1409523	Msa1134770:five_prime_UTR	30.0%
	GAAGTAAACAACCAAATTTG+TGG	+	chr7_4:1407741-1407760	None:intergenic	30.0%
!!!	ATTTTCAGGTACTAGATTGT+GGG	+	chr7_4:1407891-1407910	None:intergenic	30.0%
!	CTTTTGATCCATTGTAAACA+AGG	+	chr7_4:1408148-1408167	None:intergenic	30.0%
	GTATTGCATGTTTGGATAAA+CGG	+	chr7_4:1408376-1408395	None:intergenic	30.0%
	CGAATAGTGAATCCAATTTA+CGG	-	chr7_4:1408582-1408601	Msa1134770:CDS	30.0%
!	TTTTCCTCTTCTTGTATCTT+CGG	+	chr7_4:1408846-1408865	None:intergenic	30.0%
	AAAGAGTAGTAATGAGAACA+AGG	-	chr7_4:1408863-1408882	Msa1134770:intron	30.0%
	AAGAGTAGTAATGAGAACAA+GGG	-	chr7_4:1408864-1408883	Msa1134770:intron	30.0%
!	GATCTTATTTAGAGATGAAC+CGG	-	chr7_4:1409043-1409062	Msa1134770:intron	30.0%
	ACTTTCTCATCTACATAGTT+TGG	+	chr7_4:1409463-1409482	None:intergenic	30.0%
!	TGTAGATGAGAAAGTACATT+CGG	-	chr7_4:1409468-1409487	Msa1134770:five_prime_UTR	30.0%
	TGTAAGTTGTAACAACTTGA+TGG	+	chr7_4:1409503-1409522	None:intergenic	30.0%
!	TCAAGTTGTTACAACTTACA+AGG	-	chr7_4:1409503-1409522	Msa1134770:five_prime_UTR	30.0%
	CAAGTTGTTACAACTTACAA+GGG	-	chr7_4:1409504-1409523	Msa1134770:five_prime_UTR	30.0%
!!!	TTTTCAGGTACTAGATTGTG+GGG	+	chr7_4:1407890-1407909	None:intergenic	35.0%
!!!	GATTTTCAGGTACTAGATTG+TGG	+	chr7_4:1407892-1407911	None:intergenic	35.0%
	TCTAGTACCTGAAAATCCAT+TGG	-	chr7_4:1407895-1407914	Msa1134770:three_prime_UTR	35.0%
	AAAATGCGGATGAGTTGTAA+CGG	-	chr7_4:1408076-1408095	Msa1134770:CDS	35.0%
!	GGTTGTAGAGTACTAAGAAA+AGG	-	chr7_4:1408097-1408116	Msa1134770:CDS	35.0%
!	GCATAAGACCTTGTTTACAA+TGG	-	chr7_4:1408137-1408156	Msa1134770:CDS	35.0%
!!!	AATGTCACTTTTTACGAACC+TGG	+	chr7_4:1408268-1408287	None:intergenic	35.0%
	GCACTGAAACTACTGTAAAA+TGG	+	chr7_4:1408296-1408315	None:intergenic	35.0%
	AGTTTCAGTGCATGTTTAGA+TGG	-	chr7_4:1408305-1408324	Msa1134770:CDS	35.0%
	AGATGTGTGTATTGCATGTT+TGG	+	chr7_4:1408384-1408403	None:intergenic	35.0%
	AATCCAATTTACGGTTCAGT+CGG	-	chr7_4:1408591-1408610	Msa1134770:CDS	35.0%
	GACTCTTTGTTGAGTTAACT+CGG	+	chr7_4:1408787-1408806	None:intergenic	35.0%
	ACATGATAAACACGTGAAAC+CGG	+	chr7_4:1409155-1409174	None:intergenic	35.0%
	GAAAAGAAGGGTTGTATTGA+AGG	-	chr7_4:1409187-1409206	Msa1134770:CDS	35.0%
!!!	TGGTTCAGTTTTGACTTAAG+CGG	-	chr7_4:1409287-1409306	Msa1134770:five_prime_UTR	35.0%
!	TGCATATGATGATGCATCAA+TGG	+	chr7_4:1409531-1409550	None:intergenic	35.0%
!!!	TTTTCAGGTACTAGATTGTG+GGG	+	chr7_4:1407890-1407909	None:intergenic	35.0%
!!!	GATTTTCAGGTACTAGATTG+TGG	+	chr7_4:1407892-1407911	None:intergenic	35.0%
	TCTAGTACCTGAAAATCCAT+TGG	-	chr7_4:1407895-1407914	Msa1134770:three_prime_UTR	35.0%
	AAAATGCGGATGAGTTGTAA+CGG	-	chr7_4:1408076-1408095	Msa1134770:CDS	35.0%
!	GGTTGTAGAGTACTAAGAAA+AGG	-	chr7_4:1408097-1408116	Msa1134770:CDS	35.0%
!	GCATAAGACCTTGTTTACAA+TGG	-	chr7_4:1408137-1408156	Msa1134770:CDS	35.0%
!!!	AATGTCACTTTTTACGAACC+TGG	+	chr7_4:1408268-1408287	None:intergenic	35.0%
	GCACTGAAACTACTGTAAAA+TGG	+	chr7_4:1408296-1408315	None:intergenic	35.0%
	AGTTTCAGTGCATGTTTAGA+TGG	-	chr7_4:1408305-1408324	Msa1134770:CDS	35.0%
	AGATGTGTGTATTGCATGTT+TGG	+	chr7_4:1408384-1408403	None:intergenic	35.0%
	AATCCAATTTACGGTTCAGT+CGG	-	chr7_4:1408591-1408610	Msa1134770:CDS	35.0%
	GACTCTTTGTTGAGTTAACT+CGG	+	chr7_4:1408787-1408806	None:intergenic	35.0%
	ACATGATAAACACGTGAAAC+CGG	+	chr7_4:1409155-1409174	None:intergenic	35.0%
	GAAAAGAAGGGTTGTATTGA+AGG	-	chr7_4:1409187-1409206	Msa1134770:CDS	35.0%
!!!	TGGTTCAGTTTTGACTTAAG+CGG	-	chr7_4:1409287-1409306	Msa1134770:five_prime_UTR	35.0%
!	TGCATATGATGATGCATCAA+TGG	+	chr7_4:1409531-1409550	None:intergenic	35.0%
!	ACCATGGTTTTTCCACATTC+AGG	+	chr7_4:1407780-1407799	None:intergenic	40.0%
!!	GAGAAAGCCAATGGATTTTC+AGG	+	chr7_4:1407905-1407924	None:intergenic	40.0%
!!	TGGCATTAGCTTGTGATTCA+GGG	+	chr7_4:1408171-1408190	None:intergenic	40.0%
	GTAGAATTTGGCGAGAAACA+CGG	+	chr7_4:1408194-1408213	None:intergenic	40.0%
	GTGTTTCTCGCCAAATTCTA+CGG	-	chr7_4:1408193-1408212	Msa1134770:CDS	40.0%
	TCAGTGCATGTTTAGATGGA+CGG	-	chr7_4:1408309-1408328	Msa1134770:CDS	40.0%
	AAACCGACTGAACCGTAAAT+TGG	+	chr7_4:1408597-1408616	None:intergenic	40.0%
!	ACGGTTCAGTCGGTTTATTA+TGG	-	chr7_4:1408601-1408620	Msa1134770:CDS	40.0%
!	TCAGTCGGTTTATTATGGTC+CGG	-	chr7_4:1408606-1408625	Msa1134770:CDS	40.0%
	TCCGAAGTTATTGGTGTGAT+CGG	+	chr7_4:1408681-1408700	None:intergenic	40.0%
	CTCAACAAAGAGTCAAGACT+CGG	-	chr7_4:1408793-1408812	Msa1134770:intron	40.0%
	GAGAACAAGGGATTTGAATC+CGG	-	chr7_4:1408876-1408895	Msa1134770:intron	40.0%
	ATTTAGAGATGAACCGGAGT+TGG	-	chr7_4:1409049-1409068	Msa1134770:intron	40.0%
	GGTTTCACGTGTTTATCATG+TGG	-	chr7_4:1409154-1409173	Msa1134770:CDS	40.0%
	TGGTTCCTGTGAAGAAAAGA+AGG	-	chr7_4:1409174-1409193	Msa1134770:CDS	40.0%
	GGTTCCTGTGAAGAAAAGAA+GGG	-	chr7_4:1409175-1409194	Msa1134770:CDS	40.0%
!	ACAACCCTTCTTTTCTTCAC+AGG	+	chr7_4:1409182-1409201	None:intergenic	40.0%
	AGGGTTGTATTGAAGGATTG+TGG	-	chr7_4:1409194-1409213	Msa1134770:CDS	40.0%
	GTATTGAAGGATTGTGGTGT+TGG	-	chr7_4:1409200-1409219	Msa1134770:CDS	40.0%
!	ACCATGGTTTTTCCACATTC+AGG	+	chr7_4:1407780-1407799	None:intergenic	40.0%
!!	GAGAAAGCCAATGGATTTTC+AGG	+	chr7_4:1407905-1407924	None:intergenic	40.0%
!!	TGGCATTAGCTTGTGATTCA+GGG	+	chr7_4:1408171-1408190	None:intergenic	40.0%
	GTAGAATTTGGCGAGAAACA+CGG	+	chr7_4:1408194-1408213	None:intergenic	40.0%
	GTGTTTCTCGCCAAATTCTA+CGG	-	chr7_4:1408193-1408212	Msa1134770:CDS	40.0%
	TCAGTGCATGTTTAGATGGA+CGG	-	chr7_4:1408309-1408328	Msa1134770:CDS	40.0%
	AAACCGACTGAACCGTAAAT+TGG	+	chr7_4:1408597-1408616	None:intergenic	40.0%
!	ACGGTTCAGTCGGTTTATTA+TGG	-	chr7_4:1408601-1408620	Msa1134770:CDS	40.0%
!	TCAGTCGGTTTATTATGGTC+CGG	-	chr7_4:1408606-1408625	Msa1134770:CDS	40.0%
	TCCGAAGTTATTGGTGTGAT+CGG	+	chr7_4:1408681-1408700	None:intergenic	40.0%
	CTCAACAAAGAGTCAAGACT+CGG	-	chr7_4:1408793-1408812	Msa1134770:intron	40.0%
	GAGAACAAGGGATTTGAATC+CGG	-	chr7_4:1408876-1408895	Msa1134770:intron	40.0%
	ATTTAGAGATGAACCGGAGT+TGG	-	chr7_4:1409049-1409068	Msa1134770:intron	40.0%
	GGTTTCACGTGTTTATCATG+TGG	-	chr7_4:1409154-1409173	Msa1134770:CDS	40.0%
	TGGTTCCTGTGAAGAAAAGA+AGG	-	chr7_4:1409174-1409193	Msa1134770:CDS	40.0%
	GGTTCCTGTGAAGAAAAGAA+GGG	-	chr7_4:1409175-1409194	Msa1134770:CDS	40.0%
!	ACAACCCTTCTTTTCTTCAC+AGG	+	chr7_4:1409182-1409201	None:intergenic	40.0%
	AGGGTTGTATTGAAGGATTG+TGG	-	chr7_4:1409194-1409213	Msa1134770:CDS	40.0%
	GTATTGAAGGATTGTGGTGT+TGG	-	chr7_4:1409200-1409219	Msa1134770:CDS	40.0%
	TTTCCACATTCAGGCAGGTT+GGG	+	chr7_4:1407771-1407790	None:intergenic	45.0%
!	TTTTCCACATTCAGGCAGGT+TGG	+	chr7_4:1407772-1407791	None:intergenic	45.0%
!	TGGTTTTTCCACATTCAGGC+AGG	+	chr7_4:1407776-1407795	None:intergenic	45.0%
	GCCTGAATGTGGAAAAACCA+TGG	-	chr7_4:1407776-1407795	Msa1134770:three_prime_UTR	45.0%
	AGAGAGAGAGAGAAAGCCAA+TGG	+	chr7_4:1407914-1407933	None:intergenic	45.0%
!!	GTGGCATTAGCTTGTGATTC+AGG	+	chr7_4:1408172-1408191	None:intergenic	45.0%
	CTCATGAACCTTGTTAACGC+CGG	-	chr7_4:1408226-1408245	Msa1134770:CDS	45.0%
	TCGTTGTTGTACGAAGCATG+TGG	-	chr7_4:1408558-1408577	Msa1134770:CDS	45.0%
	GTTTATTATGGTCCGGAAGC+TGG	-	chr7_4:1408613-1408632	Msa1134770:CDS	45.0%
!!!	TTTTAAAACGGCTTCCACCG+CGG	+	chr7_4:1408652-1408671	None:intergenic	45.0%
	GCCGATCACACCAATAACTT+CGG	-	chr7_4:1408677-1408696	Msa1134770:CDS	45.0%
!!	TGTCATAGGCTTTGAGTGGT+GGG	+	chr7_4:1408725-1408744	None:intergenic	45.0%
!!	ATGTCATAGGCTTTGAGTGG+TGG	+	chr7_4:1408726-1408745	None:intergenic	45.0%
	TTTCCTCCTTCGACACATGA+CGG	+	chr7_4:1408749-1408768	None:intergenic	45.0%
	TGTGTCGAAGGAGGAAAACT+CGG	-	chr7_4:1408752-1408771	Msa1134770:CDS	45.0%
	CTCTTCTTGTATCTTCGGCT+TGG	+	chr7_4:1408841-1408860	None:intergenic	45.0%
	CAAGCCGAAGATACAAGAAG+AGG	-	chr7_4:1408839-1408858	Msa1134770:intron	45.0%
	TTCAACTGAACCGATCGGTT+CGG	-	chr7_4:1408899-1408918	Msa1134770:intron	45.0%
!	TTCATTTTCCGGTCCAACTC+CGG	+	chr7_4:1409065-1409084	None:intergenic	45.0%
!	TGGAGAGGAAAAGGTTGGTT+TGG	-	chr7_4:1409109-1409128	Msa1134770:CDS	45.0%
!!	TTGGTTTGGAGCTGACTCTT+GGG	-	chr7_4:1409123-1409142	Msa1134770:CDS	45.0%
	CTTCAATATCCGGCTTAGAC+CGG	-	chr7_4:1409245-1409264	Msa1134770:exon	45.0%
	TTCAATATCCGGCTTAGACC+GGG	-	chr7_4:1409246-1409265	Msa1134770:exon	45.0%
	TTTCCACATTCAGGCAGGTT+GGG	+	chr7_4:1407771-1407790	None:intergenic	45.0%
!	TTTTCCACATTCAGGCAGGT+TGG	+	chr7_4:1407772-1407791	None:intergenic	45.0%
!	TGGTTTTTCCACATTCAGGC+AGG	+	chr7_4:1407776-1407795	None:intergenic	45.0%
	GCCTGAATGTGGAAAAACCA+TGG	-	chr7_4:1407776-1407795	Msa1134770:three_prime_UTR	45.0%
	AGAGAGAGAGAGAAAGCCAA+TGG	+	chr7_4:1407914-1407933	None:intergenic	45.0%
!!	GTGGCATTAGCTTGTGATTC+AGG	+	chr7_4:1408172-1408191	None:intergenic	45.0%
	CTCATGAACCTTGTTAACGC+CGG	-	chr7_4:1408226-1408245	Msa1134770:CDS	45.0%
	TCGTTGTTGTACGAAGCATG+TGG	-	chr7_4:1408558-1408577	Msa1134770:CDS	45.0%
	GTTTATTATGGTCCGGAAGC+TGG	-	chr7_4:1408613-1408632	Msa1134770:CDS	45.0%
!!!	TTTTAAAACGGCTTCCACCG+CGG	+	chr7_4:1408652-1408671	None:intergenic	45.0%
	GCCGATCACACCAATAACTT+CGG	-	chr7_4:1408677-1408696	Msa1134770:CDS	45.0%
!!	TGTCATAGGCTTTGAGTGGT+GGG	+	chr7_4:1408725-1408744	None:intergenic	45.0%
!!	ATGTCATAGGCTTTGAGTGG+TGG	+	chr7_4:1408726-1408745	None:intergenic	45.0%
	TTTCCTCCTTCGACACATGA+CGG	+	chr7_4:1408749-1408768	None:intergenic	45.0%
	TGTGTCGAAGGAGGAAAACT+CGG	-	chr7_4:1408752-1408771	Msa1134770:CDS	45.0%
	CTCTTCTTGTATCTTCGGCT+TGG	+	chr7_4:1408841-1408860	None:intergenic	45.0%
	CAAGCCGAAGATACAAGAAG+AGG	-	chr7_4:1408839-1408858	Msa1134770:intron	45.0%
	TTCAACTGAACCGATCGGTT+CGG	-	chr7_4:1408899-1408918	Msa1134770:intron	45.0%
!	TTCATTTTCCGGTCCAACTC+CGG	+	chr7_4:1409065-1409084	None:intergenic	45.0%
!	TGGAGAGGAAAAGGTTGGTT+TGG	-	chr7_4:1409109-1409128	Msa1134770:CDS	45.0%
!!	TTGGTTTGGAGCTGACTCTT+GGG	-	chr7_4:1409123-1409142	Msa1134770:CDS	45.0%
	CTTCAATATCCGGCTTAGAC+CGG	-	chr7_4:1409245-1409264	Msa1134770:exon	45.0%
	TTCAATATCCGGCTTAGACC+GGG	-	chr7_4:1409246-1409265	Msa1134770:exon	45.0%
	TTCCACATTCAGGCAGGTTG+GGG	+	chr7_4:1407770-1407789	None:intergenic	50.0%
	GAATTTGGCGAGAAACACGG+TGG	+	chr7_4:1408191-1408210	None:intergenic	50.0%
	ACCAGCACGACCGTAGAATT+TGG	+	chr7_4:1408206-1408225	None:intergenic	50.0%
	GAACCTGGACGAAGATGTTC+GGG	+	chr7_4:1408253-1408272	None:intergenic	50.0%
	CGAACCTGGACGAAGATGTT+CGG	+	chr7_4:1408254-1408273	None:intergenic	50.0%
	TTGACATAGCTGCCAGCTTC+CGG	+	chr7_4:1408628-1408647	None:intergenic	50.0%
!!	GCGGTGGAAGCCGTTTTAAA+AGG	-	chr7_4:1408651-1408670	Msa1134770:CDS	50.0%
!!	GATCGGCGCGCCTTTTAAAA+CGG	+	chr7_4:1408664-1408683	None:intergenic	50.0%
	GCAGCTGCTTCCGAAGTTAT+TGG	+	chr7_4:1408690-1408709	None:intergenic	50.0%
	ACTTCGGAAGCAGCTGCTAA+CGG	-	chr7_4:1408693-1408712	Msa1134770:CDS	50.0%
!!	CGGATGTCATAGGCTTTGAG+TGG	+	chr7_4:1408729-1408748	None:intergenic	50.0%
!!	CGACACATGACGGATGTCAT+AGG	+	chr7_4:1408739-1408758	None:intergenic	50.0%
	TGACATCCGTCATGTGTCGA+AGG	-	chr7_4:1408740-1408759	Msa1134770:CDS	50.0%
	TTGAGTTAACTCGGTCGACG+CGG	+	chr7_4:1408778-1408797	None:intergenic	50.0%
	TCCGGTTCAACTGAACCGAT+CGG	-	chr7_4:1408894-1408913	Msa1134770:intron	50.0%
!	ACCGATCGGTTCAGTTGAAC+CGG	+	chr7_4:1408898-1408917	None:intergenic	50.0%
	TTCGGTTGAACCGGTTGAAG+AGG	-	chr7_4:1408917-1408936	Msa1134770:intron	50.0%
	CGGTTCATCACCTCTTCAAC+CGG	+	chr7_4:1408930-1408949	None:intergenic	50.0%
	ACGACTCATGACTCGCTGAT+CGG	+	chr7_4:1408950-1408969	None:intergenic	50.0%
	GTTGGACCGGAAAATGAAGC+CGG	-	chr7_4:1409067-1409086	Msa1134770:intron	50.0%
!!	GGTCAACCGGCTTCATTTTC+CGG	+	chr7_4:1409076-1409095	None:intergenic	50.0%
!	CTTTTCCTCTCCACTCTCAC+CGG	+	chr7_4:1409102-1409121	None:intergenic	50.0%
	GAGAGTGGAGAGGAAAAGGT+TGG	-	chr7_4:1409104-1409123	Msa1134770:CDS	50.0%
!!	GTTGGTTTGGAGCTGACTCT+TGG	-	chr7_4:1409122-1409141	Msa1134770:CDS	50.0%
!	GCTGACTCTTGGGTTTGAAC+CGG	-	chr7_4:1409133-1409152	Msa1134770:CDS	50.0%
!!	AGGATTGTGGTGTTGGCTCA+TGG	-	chr7_4:1409207-1409226	Msa1134770:CDS	50.0%
!!	TGGTGTTGGCTCATGGAATG+TGG	-	chr7_4:1409214-1409233	Msa1134770:CDS	50.0%
	TGGCTCATGGAATGTGGAGT+TGG	-	chr7_4:1409220-1409239	Msa1134770:CDS	50.0%
	GGCTCATGGAATGTGGAGTT+GGG	-	chr7_4:1409221-1409240	Msa1134770:CDS	50.0%
	GCTCATGGAATGTGGAGTTG+GGG	-	chr7_4:1409222-1409241	Msa1134770:CDS	50.0%
	GGAGTTGGGGCTTCAATATC+CGG	-	chr7_4:1409235-1409254	Msa1134770:CDS	50.0%
	AAACCGAACCAAGCCAAACC+CGG	+	chr7_4:1409267-1409286	None:intergenic	50.0%
!!!	GGTTTGGCTTGGTTCGGTTT+TGG	-	chr7_4:1409267-1409286	Msa1134770:five_prime_UTR	50.0%
	TTCCACATTCAGGCAGGTTG+GGG	+	chr7_4:1407770-1407789	None:intergenic	50.0%
	GAATTTGGCGAGAAACACGG+TGG	+	chr7_4:1408191-1408210	None:intergenic	50.0%
	ACCAGCACGACCGTAGAATT+TGG	+	chr7_4:1408206-1408225	None:intergenic	50.0%
	GAACCTGGACGAAGATGTTC+GGG	+	chr7_4:1408253-1408272	None:intergenic	50.0%
	CGAACCTGGACGAAGATGTT+CGG	+	chr7_4:1408254-1408273	None:intergenic	50.0%
	TTGACATAGCTGCCAGCTTC+CGG	+	chr7_4:1408628-1408647	None:intergenic	50.0%
!!	GCGGTGGAAGCCGTTTTAAA+AGG	-	chr7_4:1408651-1408670	Msa1134770:CDS	50.0%
!!	GATCGGCGCGCCTTTTAAAA+CGG	+	chr7_4:1408664-1408683	None:intergenic	50.0%
	GCAGCTGCTTCCGAAGTTAT+TGG	+	chr7_4:1408690-1408709	None:intergenic	50.0%
	ACTTCGGAAGCAGCTGCTAA+CGG	-	chr7_4:1408693-1408712	Msa1134770:CDS	50.0%
!!	CGGATGTCATAGGCTTTGAG+TGG	+	chr7_4:1408729-1408748	None:intergenic	50.0%
!!	CGACACATGACGGATGTCAT+AGG	+	chr7_4:1408739-1408758	None:intergenic	50.0%
	TGACATCCGTCATGTGTCGA+AGG	-	chr7_4:1408740-1408759	Msa1134770:CDS	50.0%
	TTGAGTTAACTCGGTCGACG+CGG	+	chr7_4:1408778-1408797	None:intergenic	50.0%
	TCCGGTTCAACTGAACCGAT+CGG	-	chr7_4:1408894-1408913	Msa1134770:intron	50.0%
!	ACCGATCGGTTCAGTTGAAC+CGG	+	chr7_4:1408898-1408917	None:intergenic	50.0%
	TTCGGTTGAACCGGTTGAAG+AGG	-	chr7_4:1408917-1408936	Msa1134770:intron	50.0%
	CGGTTCATCACCTCTTCAAC+CGG	+	chr7_4:1408930-1408949	None:intergenic	50.0%
	ACGACTCATGACTCGCTGAT+CGG	+	chr7_4:1408950-1408969	None:intergenic	50.0%
	GTTGGACCGGAAAATGAAGC+CGG	-	chr7_4:1409067-1409086	Msa1134770:intron	50.0%
!!	GGTCAACCGGCTTCATTTTC+CGG	+	chr7_4:1409076-1409095	None:intergenic	50.0%
!	CTTTTCCTCTCCACTCTCAC+CGG	+	chr7_4:1409102-1409121	None:intergenic	50.0%
	GAGAGTGGAGAGGAAAAGGT+TGG	-	chr7_4:1409104-1409123	Msa1134770:CDS	50.0%
!!	GTTGGTTTGGAGCTGACTCT+TGG	-	chr7_4:1409122-1409141	Msa1134770:CDS	50.0%
!	GCTGACTCTTGGGTTTGAAC+CGG	-	chr7_4:1409133-1409152	Msa1134770:CDS	50.0%
!!	AGGATTGTGGTGTTGGCTCA+TGG	-	chr7_4:1409207-1409226	Msa1134770:CDS	50.0%
!!	TGGTGTTGGCTCATGGAATG+TGG	-	chr7_4:1409214-1409233	Msa1134770:CDS	50.0%
	TGGCTCATGGAATGTGGAGT+TGG	-	chr7_4:1409220-1409239	Msa1134770:CDS	50.0%
	GGCTCATGGAATGTGGAGTT+GGG	-	chr7_4:1409221-1409240	Msa1134770:CDS	50.0%
	GCTCATGGAATGTGGAGTTG+GGG	-	chr7_4:1409222-1409241	Msa1134770:CDS	50.0%
	GGAGTTGGGGCTTCAATATC+CGG	-	chr7_4:1409235-1409254	Msa1134770:CDS	50.0%
	AAACCGAACCAAGCCAAACC+CGG	+	chr7_4:1409267-1409286	None:intergenic	50.0%
!!!	GGTTTGGCTTGGTTCGGTTT+TGG	-	chr7_4:1409267-1409286	Msa1134770:five_prime_UTR	50.0%
	AACCCCAACCTGCCTGAATG+TGG	-	chr7_4:1407765-1407784	Msa1134770:three_prime_UTR	55.0%
	GCCAAATTCTACGGTCGTGC+TGG	-	chr7_4:1408202-1408221	Msa1134770:CDS	55.0%
	TGGACGAAGATGTTCGGGAC+CGG	+	chr7_4:1408248-1408267	None:intergenic	55.0%
	CTTCGGAAGCAGCTGCTAAC+GGG	-	chr7_4:1408694-1408713	Msa1134770:CDS	55.0%
	CATCCGTCATGTGTCGAAGG+AGG	-	chr7_4:1408743-1408762	Msa1134770:CDS	55.0%
!	TCAAGACTCGGTCGCGTAAG+CGG	-	chr7_4:1408805-1408824	Msa1134770:intron	55.0%
!!	ACCGATCGGTTCGGTTGAAC+CGG	-	chr7_4:1408908-1408927	Msa1134770:intron	55.0%
!	ACCGGTTCAACCGAACCGAT+CGG	+	chr7_4:1408912-1408931	None:intergenic	55.0%
!	GTCGATTAGCCACCAGTCTG+AGG	-	chr7_4:1408968-1408987	Msa1134770:intron	55.0%
!	GATTAGCCACCAGTCTGAGG+CGG	-	chr7_4:1408971-1408990	Msa1134770:intron	55.0%
	GAGATGAACCGGAGTTGGAC+CGG	-	chr7_4:1409054-1409073	Msa1134770:intron	55.0%
	ATGAAGCCGGTTGACCGAAC+CGG	-	chr7_4:1409080-1409099	Msa1134770:CDS	55.0%
	CGGTGAGAGTGGAGAGGAAA+AGG	-	chr7_4:1409100-1409119	Msa1134770:CDS	55.0%
	TATCCGGCTTAGACCGGGTT+TGG	-	chr7_4:1409251-1409270	Msa1134770:exon	55.0%
	AAGCCAAACCCGGTCTAAGC+CGG	+	chr7_4:1409257-1409276	None:intergenic	55.0%
!!	AGACCGGGTTTGGCTTGGTT+CGG	-	chr7_4:1409261-1409280	Msa1134770:five_prime_UTR	55.0%
	AACCCCAACCTGCCTGAATG+TGG	-	chr7_4:1407765-1407784	Msa1134770:three_prime_UTR	55.0%
	GCCAAATTCTACGGTCGTGC+TGG	-	chr7_4:1408202-1408221	Msa1134770:CDS	55.0%
	TGGACGAAGATGTTCGGGAC+CGG	+	chr7_4:1408248-1408267	None:intergenic	55.0%
	CTTCGGAAGCAGCTGCTAAC+GGG	-	chr7_4:1408694-1408713	Msa1134770:CDS	55.0%
	CATCCGTCATGTGTCGAAGG+AGG	-	chr7_4:1408743-1408762	Msa1134770:CDS	55.0%
!	TCAAGACTCGGTCGCGTAAG+CGG	-	chr7_4:1408805-1408824	Msa1134770:intron	55.0%
!!	ACCGATCGGTTCGGTTGAAC+CGG	-	chr7_4:1408908-1408927	Msa1134770:intron	55.0%
!	ACCGGTTCAACCGAACCGAT+CGG	+	chr7_4:1408912-1408931	None:intergenic	55.0%
!	GTCGATTAGCCACCAGTCTG+AGG	-	chr7_4:1408968-1408987	Msa1134770:intron	55.0%
!	GATTAGCCACCAGTCTGAGG+CGG	-	chr7_4:1408971-1408990	Msa1134770:intron	55.0%
	GAGATGAACCGGAGTTGGAC+CGG	-	chr7_4:1409054-1409073	Msa1134770:intron	55.0%
	ATGAAGCCGGTTGACCGAAC+CGG	-	chr7_4:1409080-1409099	Msa1134770:CDS	55.0%
	CGGTGAGAGTGGAGAGGAAA+AGG	-	chr7_4:1409100-1409119	Msa1134770:CDS	55.0%
	TATCCGGCTTAGACCGGGTT+TGG	-	chr7_4:1409251-1409270	Msa1134770:exon	55.0%
	AAGCCAAACCCGGTCTAAGC+CGG	+	chr7_4:1409257-1409276	None:intergenic	55.0%
!!	AGACCGGGTTTGGCTTGGTT+CGG	-	chr7_4:1409261-1409280	Msa1134770:five_prime_UTR	55.0%
	GTTCGGGACCGGCGTTAACA+AGG	+	chr7_4:1408237-1408256	None:intergenic	60.0%
	GGTCCCGAACATCTTCGTCC+AGG	-	chr7_4:1408247-1408266	Msa1134770:CDS	60.0%
	CTGGCAGCTATGTCAAGCCG+CGG	-	chr7_4:1408632-1408651	Msa1134770:CDS	60.0%
	GGAAGCAGCTGCTAACGGGA+GGG	-	chr7_4:1408698-1408717	Msa1134770:CDS	60.0%
	GAAGCAGCTGCTAACGGGAG+GGG	-	chr7_4:1408699-1408718	Msa1134770:CDS	60.0%
!!	CTCTCACCGGTTCGGTCAAC+CGG	+	chr7_4:1409089-1409108	None:intergenic	60.0%
	GTTGACCGAACCGGTGAGAG+TGG	-	chr7_4:1409089-1409108	Msa1134770:CDS	60.0%
!	CCTCTCCACTCTCACCGGTT+CGG	+	chr7_4:1409097-1409116	None:intergenic	60.0%
	GGCTTAGACCGGGTTTGGCT+TGG	-	chr7_4:1409256-1409275	Msa1134770:exon	60.0%
	GTTCGGGACCGGCGTTAACA+AGG	+	chr7_4:1408237-1408256	None:intergenic	60.0%
	GGTCCCGAACATCTTCGTCC+AGG	-	chr7_4:1408247-1408266	Msa1134770:CDS	60.0%
	CTGGCAGCTATGTCAAGCCG+CGG	-	chr7_4:1408632-1408651	Msa1134770:CDS	60.0%
	GGAAGCAGCTGCTAACGGGA+GGG	-	chr7_4:1408698-1408717	Msa1134770:CDS	60.0%
	GAAGCAGCTGCTAACGGGAG+GGG	-	chr7_4:1408699-1408718	Msa1134770:CDS	60.0%
!!	CTCTCACCGGTTCGGTCAAC+CGG	+	chr7_4:1409089-1409108	None:intergenic	60.0%
	GTTGACCGAACCGGTGAGAG+TGG	-	chr7_4:1409089-1409108	Msa1134770:CDS	60.0%
!	CCTCTCCACTCTCACCGGTT+CGG	+	chr7_4:1409097-1409116	None:intergenic	60.0%
	GGCTTAGACCGGGTTTGGCT+TGG	-	chr7_4:1409256-1409275	Msa1134770:exon	60.0%
	GCAGCTATGTCAAGCCGCGG+TGG	-	chr7_4:1408635-1408654	Msa1134770:CDS	65.0%
	CGGAAGCAGCTGCTAACGGG+AGG	-	chr7_4:1408697-1408716	Msa1134770:CDS	65.0%
	ACGCAACCGCCTCAGACTGG+TGG	+	chr7_4:1408980-1408999	None:intergenic	65.0%
	CCAACGCAACCGCCTCAGAC+TGG	+	chr7_4:1408983-1409002	None:intergenic	65.0%
!	CCAGTCTGAGGCGGTTGCGT+TGG	-	chr7_4:1408980-1408999	Msa1134770:intron	65.0%
!	GTCTGAGGCGGTTGCGTTGG+TGG	-	chr7_4:1408983-1409002	Msa1134770:intron	65.0%
!	GAGGCGGTTGCGTTGGTGGA+TGG	-	chr7_4:1408987-1409006	Msa1134770:intron	65.0%
	CCGAACCGGTGAGAGTGGAG+AGG	-	chr7_4:1409094-1409113	Msa1134770:CDS	65.0%
	GCAGCTATGTCAAGCCGCGG+TGG	-	chr7_4:1408635-1408654	Msa1134770:CDS	65.0%
	CGGAAGCAGCTGCTAACGGG+AGG	-	chr7_4:1408697-1408716	Msa1134770:CDS	65.0%
	ACGCAACCGCCTCAGACTGG+TGG	+	chr7_4:1408980-1408999	None:intergenic	65.0%
	CCAACGCAACCGCCTCAGAC+TGG	+	chr7_4:1408983-1409002	None:intergenic	65.0%
!	CCAGTCTGAGGCGGTTGCGT+TGG	-	chr7_4:1408980-1408999	Msa1134770:intron	65.0%
!	GTCTGAGGCGGTTGCGTTGG+TGG	-	chr7_4:1408983-1409002	Msa1134770:intron	65.0%
!	GAGGCGGTTGCGTTGGTGGA+TGG	-	chr7_4:1408987-1409006	Msa1134770:intron	65.0%
	CCGAACCGGTGAGAGTGGAG+AGG	-	chr7_4:1409094-1409113	Msa1134770:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_4	gene	1407727	1409611	1407727	ID=Msa1134770;Name=Msa1134770
chr7_4	mRNA	1407727	1409611	1407727	ID=Msa1134770-mRNA-1;Parent=Msa1134770;Name=Msa1134770-mRNA-1;_AED=0.00;_eAED=0.00;_QI=352\|1\|1\|1\|1\|1\|2\|349\|301
chr7_4	exon	1407727	1408791	1407727	ID=Msa1134770-mRNA-1:exon:547;Parent=Msa1134770-mRNA-1
chr7_4	exon	1409070	1409611	1409070	ID=Msa1134770-mRNA-1:exon:546;Parent=Msa1134770-mRNA-1
chr7_4	five_prime_UTR	1409260	1409611	1409260	ID=Msa1134770-mRNA-1:five_prime_utr;Parent=Msa1134770-mRNA-1
chr7_4	CDS	1409070	1409259	1409070	ID=Msa1134770-mRNA-1:cds;Parent=Msa1134770-mRNA-1
chr7_4	CDS	1408076	1408791	1408076	ID=Msa1134770-mRNA-1:cds;Parent=Msa1134770-mRNA-1
chr7_4	three_prime_UTR	1407727	1408075	1407727	ID=Msa1134770-mRNA-1:three_prime_utr;Parent=Msa1134770-mRNA-1

Gene Sequence

>Msa1134770

ATGCGGATGAGTTGTAACGGTTGTAGAGTACTAAGAAAAGGTTGCAGTGAAAACTGTAGCATAAGACCTTGTTTACAATGGATCAAAAGCCCTGAATCACAAGCTAATGCCACCGTGTTTCTCGCCAAATTCTACGGTCGTGCTGGTCTCATGAACCTTGTTAACGCCGGTCCCGAACATCTTCGTCCAGCAATTTTTCGTTCGTTGTTGTACGAAGCATGTGGTCGAATAGTGAATCCAATTTACGGTTCAGTCGGTTTATTATGGTCCGGAAGCTGGCAGCTATGTCAAGCCGCGGTGGAAGCCGTTTTAAAAGGCGCGCCGATCACACCAATAACTTCGGAAGCAGCTGCTAACGGGAGGGGCCCACCACTCAAAGCCTATGACATCCGTCATGTGTCGAAGGAGGAAAACTCGGCCGCGTCGACCGAGTTAACTCAACAAAGAGTCAAGACTCGGTCGCGTAAGCGGTCGAGTTTAGCCAAGCCGAAGATACAAGAAGAGGAAAAGAGTAGTAATGAGAACAAGGGATTTGAATCCGGTTCAACTGAACCGATCGGTTCGGTTGAACCGGTTGAAGAGGTGATGAACCGATCAGCGAGTCATGAGTCGTCGATTAGCCACCAGTCTGAGGCGGTTGCGTTGGTGGATGGAGAGAGTAAAGATAGTGAGAGTGAAACTTCGATGATCTTATTTAGAGATGAACCGGAGTTGGACCGGAAAATGAAGCCGGTTGACCGAACCGGTGAGAGTGGAGAGGAAAAGGTTGGTTTGGAGCTGACTCTTGGGTTTGAACCGGTTTCACGTGTTTATCATGTGGTTCCTGTGAAGAAAAGAAGGGTTGTATTGAAGGATTGTGGTGTTGGCTCATGGAATGTGGAGTTGGGGCTTCAATATCCGGCTTAG

Protein sequence

>Msa1134770

MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKEENSAASTELTQQRVKTRSRKRSSLAKPKIQEEEKSSNENKGFESGSTEPIGSVEPVEEVMNRSASHESSISHQSEAVALVDGESKDSESETSMILFRDEPELDRKMKPVDRTGESGEEKVGLELTLGFEPVSRVYHVVPVKKRRVVLKDCGVGSWNVELGLQYPA*