Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970100 | XP_013450691.1 | 99.216 | 510 | 4 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1043 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970100 | sp|Q42806|KPYC_SOYBN | 92.759 | 511 | 36 | 1 | 1 | 510 | 1 | 511 | 0.0 | 981 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970100 | A0A072U4Q0 | 99.216 | 510 | 4 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1043 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0970100 | 0.806377 | 8.471318e-50 | -8.615850e-47 |
| Msa0010210 | Msa0970100 | 0.809563 | 1.778363e-50 | -8.615850e-47 |
| Msa0026250 | Msa0970100 | 0.808607 | 2.849885e-50 | -8.615850e-47 |
| Msa0034100 | Msa0970100 | -0.827784 | 1.291810e-54 | -8.615850e-47 |
| Msa0035740 | Msa0970100 | 0.811909 | 5.530090e-51 | -8.615850e-47 |
| Msa0036550 | Msa0970100 | 0.842392 | 2.659404e-58 | -8.615850e-47 |
| Msa0039750 | Msa0970100 | 0.816428 | 5.558985e-52 | -8.615850e-47 |
| Msa0042240 | Msa0970100 | -0.804488 | 2.108730e-49 | -8.615850e-47 |
| Msa0043840 | Msa0970100 | 0.837374 | 5.397564e-57 | -8.615850e-47 |
| Msa0046430 | Msa0970100 | 0.806904 | 6.557310e-50 | -8.615850e-47 |
| Msa0050530 | Msa0970100 | 0.808291 | 3.328780e-50 | -8.615850e-47 |
| Msa0064960 | Msa0970100 | 0.815487 | 9.014344e-52 | -8.615850e-47 |
| Msa0081290 | Msa0970100 | -0.800230 | 1.588832e-48 | -8.615850e-47 |
| Msa0081790 | Msa0970100 | -0.819082 | 1.400135e-52 | -8.615850e-47 |
| Msa0089540 | Msa0970100 | 0.843735 | 1.166805e-58 | -8.615850e-47 |
| Msa0090500 | Msa0970100 | 0.841803 | 3.808126e-58 | -8.615850e-47 |
| Msa0100600 | Msa0970100 | 0.810662 | 1.031345e-50 | -8.615850e-47 |
| Msa0100890 | Msa0970100 | 0.808354 | 3.227210e-50 | -8.615850e-47 |
| Msa0104740 | Msa0970100 | 0.811720 | 6.078111e-51 | -8.615850e-47 |
| Msa0110240 | Msa0970100 | 0.838483 | 2.800078e-57 | -8.615850e-47 |
| Msa0118150 | Msa0970100 | 0.806265 | 8.945955e-50 | -8.615850e-47 |
| Msa0605350 | Msa0970100 | 0.811939 | 5.447514e-51 | -8.615850e-47 |
| Msa0612880 | Msa0970100 | -0.802499 | 5.450793e-49 | -8.615850e-47 |
| Msa0614020 | Msa0970100 | -0.810105 | 1.359691e-50 | -8.615850e-47 |
| Msa0623040 | Msa0970100 | 0.811223 | 7.794606e-51 | -8.615850e-47 |
| Msa0631900 | Msa0970100 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa0634900 | Msa0970100 | -0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0646260 | Msa0970100 | 0.819956 | 8.844486e-53 | -8.615850e-47 |
| Msa0659020 | Msa0970100 | -0.807309 | 5.382173e-50 | -8.615850e-47 |
| Msa0661480 | Msa0970100 | 0.807248 | 5.546712e-50 | -8.615850e-47 |
| Msa0673940 | Msa0970100 | 0.810771 | 9.767257e-51 | -8.615850e-47 |
| Msa0685610 | Msa0970100 | 0.888638 | 4.945597e-73 | -8.615850e-47 |
| Msa0689660 | Msa0970100 | 0.814369 | 1.595990e-51 | -8.615850e-47 |
| Msa0706690 | Msa0970100 | 0.801584 | 8.406273e-49 | -8.615850e-47 |
| Msa0732970 | Msa0970100 | 0.818122 | 2.311343e-52 | -8.615850e-47 |
| Msa0756670 | Msa0970100 | -0.810655 | 1.034964e-50 | -8.615850e-47 |
| Msa0761830 | Msa0970100 | 0.819912 | 9.051044e-53 | -8.615850e-47 |
| Msa0773960 | Msa0970100 | 0.818309 | 2.096033e-52 | -8.615850e-47 |
| Msa0774360 | Msa0970100 | -0.812661 | 3.789655e-51 | -8.615850e-47 |
| Msa0786740 | Msa0970100 | 0.801250 | 9.839464e-49 | -8.615850e-47 |
| Msa0797980 | Msa0970100 | -0.807250 | 5.539900e-50 | -8.615850e-47 |
| Msa0812020 | Msa0970100 | -0.822530 | 2.255109e-53 | -8.615850e-47 |
| Msa0822740 | Msa0970100 | 0.801904 | 7.225628e-49 | -8.615850e-47 |
| Msa0836060 | Msa0970100 | -0.810075 | 1.380234e-50 | -8.615850e-47 |
| Msa0128110 | Msa0970100 | -0.825089 | 5.668230e-54 | -8.615850e-47 |
| Msa0128340 | Msa0970100 | 0.836804 | 7.550893e-57 | -8.615850e-47 |
| Msa0128740 | Msa0970100 | 0.831966 | 1.236711e-55 | -8.615850e-47 |
| Msa0130710 | Msa0970100 | 0.803619 | 3.197195e-49 | -8.615850e-47 |
| Msa0135230 | Msa0970100 | 0.812516 | 4.077103e-51 | -8.615850e-47 |
| Msa0137760 | Msa0970100 | 0.813513 | 2.463892e-51 | -8.615850e-47 |
| Msa0137970 | Msa0970100 | 0.825739 | 3.977179e-54 | -8.615850e-47 |
| Msa0138350 | Msa0970100 | 0.803918 | 2.771924e-49 | -8.615850e-47 |
| Msa0140870 | Msa0970100 | -0.825636 | 4.208147e-54 | -8.615850e-47 |
| Msa0161960 | Msa0970100 | 0.822878 | 1.871416e-53 | -8.615850e-47 |
| Msa0164170 | Msa0970100 | 0.815287 | 9.988580e-52 | -8.615850e-47 |
| Msa0166180 | Msa0970100 | 0.809544 | 1.795200e-50 | -8.615850e-47 |
| Msa0168380 | Msa0970100 | 0.806466 | 8.113235e-50 | -8.615850e-47 |
| Msa0173380 | Msa0970100 | 0.802372 | 5.788685e-49 | -8.615850e-47 |
| Msa0176600 | Msa0970100 | 0.827145 | 1.838671e-54 | -8.615850e-47 |
| Msa0183920 | Msa0970100 | 0.807410 | 5.123743e-50 | -8.615850e-47 |
| Msa0205250 | Msa0970100 | 0.814022 | 1.903670e-51 | -8.615850e-47 |
| Msa0211460 | Msa0970100 | 0.811085 | 8.350083e-51 | -8.615850e-47 |
| Msa0219280 | Msa0970100 | 0.822320 | 2.522793e-53 | -8.615850e-47 |
| Msa0219840 | Msa0970100 | 0.855502 | 6.042148e-62 | -8.615850e-47 |
| Msa0221460 | Msa0970100 | -0.827048 | 1.940309e-54 | -8.615850e-47 |
| Msa0227790 | Msa0970100 | 0.813133 | 2.986493e-51 | -8.615850e-47 |
| Msa0228690 | Msa0970100 | 0.811449 | 6.961096e-51 | -8.615850e-47 |
| Msa0369700 | Msa0970100 | 0.828494 | 8.716128e-55 | -8.615850e-47 |
| Msa0372100 | Msa0970100 | 0.827538 | 1.480761e-54 | -8.615850e-47 |
| Msa0375550 | Msa0970100 | 0.829190 | 5.913192e-55 | -8.615850e-47 |
| Msa0384590 | Msa0970100 | 0.850081 | 2.138148e-60 | -8.615850e-47 |
| Msa0388210 | Msa0970100 | 0.810199 | 1.298233e-50 | -8.615850e-47 |
| Msa0430040 | Msa0970100 | -0.805249 | 1.462388e-49 | -8.615850e-47 |
| Msa0432200 | Msa0970100 | 0.824732 | 6.882643e-54 | -8.615850e-47 |
| Msa0434660 | Msa0970100 | 0.836302 | 1.013431e-56 | -8.615850e-47 |
| Msa0436100 | Msa0970100 | 0.803239 | 3.833358e-49 | -8.615850e-47 |
| Msa0436440 | Msa0970100 | 0.819360 | 1.210174e-52 | -8.615850e-47 |
| Msa0452770 | Msa0970100 | 0.800319 | 1.523627e-48 | -8.615850e-47 |
| Msa0244820 | Msa0970100 | -0.831214 | 1.895567e-55 | -8.615850e-47 |
| Msa0248430 | Msa0970100 | 0.811503 | 6.776490e-51 | -8.615850e-47 |
| Msa0258910 | Msa0970100 | 0.823680 | 1.215706e-53 | -8.615850e-47 |
| Msa0260980 | Msa0970100 | 0.817664 | 2.932612e-52 | -8.615850e-47 |
| Msa0261480 | Msa0970100 | 0.803613 | 3.207107e-49 | -8.615850e-47 |
| Msa0261490 | Msa0970100 | 0.812947 | 3.280791e-51 | -8.615850e-47 |
| Msa0267710 | Msa0970100 | 0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0272790 | Msa0970100 | 0.819234 | 1.292614e-52 | -8.615850e-47 |
| Msa0276800 | Msa0970100 | -0.803991 | 2.676688e-49 | -8.615850e-47 |
| Msa0298400 | Msa0970100 | 0.828319 | 9.605540e-55 | -8.615850e-47 |
| Msa0300670 | Msa0970100 | -0.833961 | 3.947832e-56 | -8.615850e-47 |
| Msa0328870 | Msa0970100 | 0.805443 | 1.331745e-49 | -8.615850e-47 |
| Msa0336120 | Msa0970100 | 0.827519 | 1.496376e-54 | -8.615850e-47 |
| Msa0336520 | Msa0970100 | 0.812026 | 5.215798e-51 | -8.615850e-47 |
| Msa0337760 | Msa0970100 | -0.824293 | 8.730046e-54 | -8.615850e-47 |
| Msa0358470 | Msa0970100 | 0.806122 | 9.589914e-50 | -8.615850e-47 |
| Msa0506750 | Msa0970100 | 0.800876 | 1.173203e-48 | -8.615850e-47 |
| Msa0514540 | Msa0970100 | 0.816286 | 5.981865e-52 | -8.615850e-47 |
| Msa0521060 | Msa0970100 | 0.820736 | 5.857903e-53 | -8.615850e-47 |
| Msa0521510 | Msa0970100 | 0.806894 | 6.589526e-50 | -8.615850e-47 |
| Msa0522540 | Msa0970100 | 0.845630 | 3.601962e-59 | -8.615850e-47 |
| Msa0526150 | Msa0970100 | 0.832492 | 9.168046e-56 | -8.615850e-47 |
| Msa0528310 | Msa0970100 | 0.803199 | 3.907141e-49 | -8.615850e-47 |
| Msa0541880 | Msa0970100 | 0.888297 | 6.688671e-73 | -8.615850e-47 |
| Msa0541940 | Msa0970100 | 0.892174 | 2.024483e-74 | -8.615850e-47 |
| Msa0549870 | Msa0970100 | 0.825718 | 4.022829e-54 | -8.615850e-47 |
| Msa0568290 | Msa0970100 | -0.801608 | 8.310431e-49 | -8.615850e-47 |
| Msa0571350 | Msa0970100 | 0.821838 | 3.262458e-53 | -8.615850e-47 |
| Msa0572360 | Msa0970100 | 0.843620 | 1.252878e-58 | -8.615850e-47 |
| Msa0575950 | Msa0970100 | 0.851678 | 7.588417e-61 | -8.615850e-47 |
| Msa0576330 | Msa0970100 | 0.807089 | 5.993168e-50 | -8.615850e-47 |
| Msa0578830 | Msa0970100 | 0.815742 | 7.909501e-52 | -8.615850e-47 |
| Msa0578930 | Msa0970100 | 0.818843 | 1.586250e-52 | -8.615850e-47 |
| Msa0579080 | Msa0970100 | 0.811888 | 5.589786e-51 | -8.615850e-47 |
| Msa0587180 | Msa0970100 | 0.814142 | 1.790592e-51 | -8.615850e-47 |
| Msa0591890 | Msa0970100 | 0.803202 | 3.900670e-49 | -8.615850e-47 |
| Msa0852090 | Msa0970100 | -0.801098 | 1.057003e-48 | -8.615850e-47 |
| Msa0871420 | Msa0970100 | 0.800543 | 1.371900e-48 | -8.615850e-47 |
| Msa0876230 | Msa0970100 | 0.809006 | 2.342379e-50 | -8.615850e-47 |
| Msa0902270 | Msa0970100 | 0.810928 | 9.032905e-51 | -8.615850e-47 |
| Msa0921860 | Msa0970100 | 0.860801 | 1.603135e-63 | -8.615850e-47 |
| Msa0929900 | Msa0970100 | 0.800632 | 1.316087e-48 | -8.615850e-47 |
| Msa0931370 | Msa0970100 | 0.841742 | 3.951784e-58 | -8.615850e-47 |
| Msa0941520 | Msa0970100 | 0.841376 | 4.934798e-58 | -8.615850e-47 |
| Msa0958830 | Msa0970100 | 0.850220 | 1.954623e-60 | -8.615850e-47 |
| Msa0970040 | Msa0970100 | 0.940863 | 1.124260e-100 | -8.615850e-47 |
| Msa0970100 | Msa0978530 | 0.840306 | 9.413084e-58 | -8.615850e-47 |
| Msa0970100 | Msa0982730 | 0.800784 | 1.225023e-48 | -8.615850e-47 |
| Msa0970100 | Msa1026710 | 0.861613 | 9.069166e-64 | -8.615850e-47 |
| Msa0970100 | Msa1027160 | 0.824404 | 8.223095e-54 | -8.615850e-47 |
| Msa0970100 | Msa1036590 | 0.805548 | 1.266046e-49 | -8.615850e-47 |
| Msa0970100 | Msa1047300 | 0.801072 | 1.070069e-48 | -8.615850e-47 |
| Msa0970100 | Msa1047320 | 0.808960 | 2.395629e-50 | -8.615850e-47 |
| Msa0970100 | Msa1057620 | -0.839262 | 1.760503e-57 | -8.615850e-47 |
| Msa0970100 | Msa1061780 | 0.830514 | 2.813111e-55 | -8.615850e-47 |
| Msa0970100 | Msa1061790 | 0.809364 | 1.963027e-50 | -8.615850e-47 |
| Msa0970100 | Msa1076900 | 0.809537 | 1.802087e-50 | -8.615850e-47 |
| Msa0970100 | Msa1085560 | 0.845982 | 2.890061e-59 | -8.615850e-47 |
| Msa0970100 | Msa1085680 | 0.812854 | 3.438722e-51 | -8.615850e-47 |
| Msa0970100 | Msa1107320 | 0.819978 | 8.742583e-53 | -8.615850e-47 |
| Msa0970100 | Msa1107330 | 0.803766 | 2.980709e-49 | -8.615850e-47 |
| Msa0970100 | Msa1111910 | 0.802709 | 4.933684e-49 | -8.615850e-47 |
| Msa0970100 | Msa1130770 | 0.819770 | 9.756615e-53 | -8.615850e-47 |
| Msa0970100 | Msa1134770 | 0.818040 | 2.412273e-52 | -8.615850e-47 |
| Msa0970100 | Msa1146980 | 0.837310 | 5.606531e-57 | -8.615850e-47 |
| Msa0970100 | Msa1150860 | 0.802360 | 5.821626e-49 | -8.615850e-47 |
| Msa0970100 | Msa1150870 | 0.803380 | 3.583780e-49 | -8.615850e-47 |
| Msa0970100 | Msa1154630 | 0.851730 | 7.336679e-61 | -8.615850e-47 |
| Msa0970100 | Msa1183900 | 0.811243 | 7.717892e-51 | -8.615850e-47 |
| Msa0970100 | Msa1184680 | 0.834164 | 3.511052e-56 | -8.615850e-47 |
| Msa0970100 | Msa1190560 | 0.834259 | 3.323345e-56 | -8.615850e-47 |
| Msa0970100 | Msa1190770 | 0.830571 | 2.724451e-55 | -8.615850e-47 |
| Msa0970100 | Msa1197720 | 0.838319 | 3.085551e-57 | -8.615850e-47 |
| Msa0970100 | Msa1200360 | 0.808570 | 2.902384e-50 | -8.615850e-47 |
| Msa0970100 | Msa1220580 | 0.801775 | 7.678129e-49 | -8.615850e-47 |
| Msa0970100 | Msa1227760 | 0.802447 | 5.587190e-49 | -8.615850e-47 |
| Msa0970100 | Msa1245070 | 0.825398 | 4.791583e-54 | -8.615850e-47 |
| Msa0970100 | Msa1251410 | 0.816322 | 5.870399e-52 | -8.615850e-47 |
| Msa0970100 | Msa1253270 | 0.803486 | 3.407563e-49 | -8.615850e-47 |
| Msa0970100 | Msa1283980 | 0.802932 | 4.436462e-49 | -8.615850e-47 |
| Msa0970100 | Msa1308860 | 0.814926 | 1.201001e-51 | -8.615850e-47 |
| Msa0970100 | Msa1335500 | 0.806367 | 8.513014e-50 | -8.615850e-47 |
| Msa0970100 | Msa1342560 | 0.805560 | 1.258272e-49 | -8.615850e-47 |
| Msa0970100 | Msa1343450 | -0.804229 | 2.388226e-49 | -8.615850e-47 |
| Msa0970100 | Msa1347610 | 0.831167 | 1.945810e-55 | -8.615850e-47 |
| Msa0970100 | Msa1356450 | 0.895680 | 7.610243e-76 | -8.615850e-47 |
| Msa0970100 | Msa1363010 | 0.807507 | 4.886783e-50 | -8.615850e-47 |
| Msa0970100 | Msa1371800 | 0.801658 | 8.115837e-49 | -8.615850e-47 |
| Msa0970100 | Msa1372030 | 0.807545 | 4.797443e-50 | -8.615850e-47 |
| Msa0970100 | Msa1377460 | 0.807015 | 6.213404e-50 | -8.615850e-47 |
| Msa0970100 | Msa1379940 | 0.851140 | 1.077122e-60 | -8.615850e-47 |
| Msa0970100 | Msa1395720 | 0.847769 | 9.379935e-60 | -8.615850e-47 |
| Msa0970100 | Msa1396110 | 0.814340 | 1.619693e-51 | -8.615850e-47 |
| Msa0970100 | Msa1400290 | -0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa0970100 | Msa1401910 | 0.811885 | 5.597633e-51 | -8.615850e-47 |
| Msa0970100 | Msa1420830 | 0.862510 | 4.815376e-64 | -8.615850e-47 |
| Msa0970100 | Msa1429810 | 0.838476 | 2.810895e-57 | -8.615850e-47 |
| Msa0970100 | Msa1434300 | 0.854198 | 1.444420e-61 | -8.615850e-47 |
| Msa0970100 | Msa1434700 | 0.844243 | 8.528986e-59 | -8.615850e-47 |
| Msa0970100 | Msa1447900 | 0.824633 | 7.260755e-54 | -8.615850e-47 |
| Msa0970100 | Msa1450290 | 0.809482 | 1.851270e-50 | -8.615850e-47 |
| Msa0970100 | Msa1450630 | -0.802901 | 4.501757e-49 | -8.615850e-47 |
| Msa0970100 | Msa1456040 | 0.810794 | 9.657382e-51 | -8.615850e-47 |
| Msa0970100 | Msa1460170 | 0.814749 | 1.314949e-51 | -8.615850e-47 |
| Msa0970100 | Msa1462780 | 0.826681 | 2.373792e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970100 | MtrunA17_Chr6g0448901 | 99.216 | 510 | 4 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1043 |
| Msa0970100 | MtrunA17_Chr4g0043311 | 78.208 | 491 | 107 | 0 | 20 | 510 | 7 | 497 | 0.0 | 818 |
| Msa0970100 | MtrunA17_Chr7g0263711 | 77.800 | 491 | 109 | 0 | 20 | 510 | 10 | 500 | 0.0 | 810 |
| Msa0970100 | MtrunA17_Chr4g0043301 | 79.226 | 491 | 102 | 0 | 20 | 510 | 10 | 500 | 0.0 | 806 |
| Msa0970100 | MtrunA17_Chr7g0265591 | 44.153 | 496 | 263 | 9 | 22 | 506 | 30 | 522 | 2.00e-133 | 397 |
| Msa0970100 | MtrunA17_Chr1g0197911 | 43.030 | 495 | 269 | 7 | 22 | 506 | 30 | 521 | 3.34e-132 | 394 |
| Msa0970100 | MtrunA17_Chr1g0179541 | 43.260 | 497 | 252 | 7 | 22 | 506 | 30 | 508 | 1.35e-126 | 379 |
| Msa0970100 | MtrunA17_Chr1g0202291 | 37.083 | 480 | 259 | 12 | 21 | 492 | 104 | 548 | 5.59e-86 | 276 |
| Msa0970100 | MtrunA17_Chr5g0400361 | 36.920 | 474 | 268 | 11 | 21 | 492 | 78 | 522 | 2.05e-85 | 273 |
| Msa0970100 | MtrunA17_Chr6g0463101 | 36.175 | 481 | 262 | 12 | 21 | 492 | 106 | 550 | 2.28e-84 | 271 |
| Msa0970100 | MtrunA17_Chr1g0206791 | 32.179 | 491 | 295 | 11 | 21 | 498 | 17 | 482 | 6.49e-75 | 245 |
| Msa0970100 | MtrunA17_Chr1g0188101 | 30.661 | 499 | 291 | 11 | 21 | 495 | 90 | 557 | 1.78e-73 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970100 | AT5G08570.1 | 88.235 | 510 | 60 | 0 | 1 | 510 | 1 | 510 | 0.0 | 948 |
| Msa0970100 | AT5G08570.2 | 88.235 | 510 | 60 | 0 | 1 | 510 | 1 | 510 | 0.0 | 948 |
| Msa0970100 | AT5G08570.3 | 88.235 | 510 | 60 | 0 | 1 | 510 | 1 | 510 | 0.0 | 948 |
| Msa0970100 | AT5G63680.3 | 87.059 | 510 | 66 | 0 | 1 | 510 | 1 | 510 | 0.0 | 934 |
| Msa0970100 | AT5G63680.1 | 87.059 | 510 | 66 | 0 | 1 | 510 | 1 | 510 | 0.0 | 934 |
| Msa0970100 | AT5G63680.2 | 87.059 | 510 | 66 | 0 | 1 | 510 | 1 | 510 | 0.0 | 934 |
| Msa0970100 | AT5G56350.1 | 79.633 | 491 | 100 | 0 | 20 | 510 | 8 | 498 | 0.0 | 818 |
| Msa0970100 | AT4G26390.1 | 78.004 | 491 | 108 | 0 | 20 | 510 | 7 | 497 | 0.0 | 802 |
| Msa0970100 | AT3G04050.1 | 69.763 | 506 | 148 | 4 | 6 | 506 | 1 | 506 | 0.0 | 724 |
| Msa0970100 | AT3G55650.1 | 68.191 | 503 | 156 | 3 | 12 | 510 | 8 | 510 | 0.0 | 702 |
| Msa0970100 | AT3G25960.1 | 69.461 | 501 | 140 | 4 | 12 | 510 | 8 | 497 | 0.0 | 702 |
| Msa0970100 | AT3G55810.1 | 66.194 | 494 | 145 | 4 | 21 | 510 | 17 | 492 | 0.0 | 653 |
| Msa0970100 | AT2G36580.1 | 44.848 | 495 | 261 | 8 | 22 | 506 | 30 | 522 | 1.13e-134 | 400 |
| Msa0970100 | AT3G52990.1 | 44.646 | 495 | 262 | 8 | 22 | 506 | 30 | 522 | 2.31e-134 | 399 |
| Msa0970100 | AT3G52990.2 | 43.312 | 471 | 255 | 8 | 46 | 506 | 1 | 469 | 9.09e-124 | 370 |
| Msa0970100 | AT1G32440.1 | 38.958 | 480 | 260 | 13 | 15 | 492 | 95 | 543 | 1.23e-87 | 280 |
| Msa0970100 | AT5G52920.1 | 36.287 | 474 | 271 | 11 | 21 | 492 | 111 | 555 | 8.27e-84 | 271 |
| Msa0970100 | AT3G22960.1 | 30.972 | 494 | 294 | 11 | 21 | 495 | 118 | 583 | 1.52e-72 | 241 |
| Msa0970100 | AT3G49160.3 | 34.300 | 207 | 123 | 6 | 135 | 332 | 389 | 591 | 6.21e-20 | 93.6 |
| Msa0970100 | AT3G49160.1 | 34.300 | 207 | 123 | 6 | 135 | 332 | 477 | 679 | 6.37e-20 | 94.0 |
Find 129 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAAATTGTTTGTACTTT+GGG | 0.213355 | 6_4:-1576735 | Msa0970100:CDS |
| GAGTTTCGCTCTGGCCTTAT+TGG | 0.243879 | 6_4:+1574628 | None:intergenic |
| CATCGTTTGGTAGTTGATTC+AGG | 0.248629 | 6_4:+1576772 | None:intergenic |
| ACCCAAAGTACAAACAATTT+TGG | 0.262629 | 6_4:+1576734 | None:intergenic |
| CAGAGGCTTGATTCCTATAT+TGG | 0.264607 | 6_4:-1574450 | Msa0970100:CDS |
| TGTCCTTCTTTGAGTTGAAT+AGG | 0.285375 | 6_4:+1575798 | None:intergenic |
| TATATTAAGCTGTGCCTTGC+TGG | 0.290018 | 6_4:+1574473 | None:intergenic |
| TCATTTCAAGGTTGAGAATC+AGG | 0.297800 | 6_4:-1575086 | Msa0970100:intron |
| GTTGTTGCTCTTCATCGTAT+TGG | 0.325415 | 6_4:-1574323 | Msa0970100:CDS |
| GACCAAAATTGTTTGTACTT+TGG | 0.339741 | 6_4:-1576736 | Msa0970100:CDS |
| GCAGAATCATCCCTTGATTA+TGG | 0.346101 | 6_4:-1574734 | Msa0970100:CDS |
| TGCTGTACGCACAGCCAATA+AGG | 0.350511 | 6_4:-1574642 | Msa0970100:CDS |
| GCCAGGAAAATCTTCTCAAC+TGG | 0.350809 | 6_4:+1574983 | None:intergenic |
| GTTAATGTCCGCAAGGTTCT+CGG | 0.353104 | 6_4:-1575432 | Msa0970100:CDS |
| GCAATCATATCAATATTGTT+AGG | 0.355092 | 6_4:+1575486 | None:intergenic |
| TGCTCTTTCATTTGTTCGTA+AGG | 0.360649 | 6_4:-1575466 | Msa0970100:CDS |
| ATTTATAAGTGTAATCTTGT+TGG | 0.364853 | 6_4:-1574947 | Msa0970100:CDS |
| TGACCACAGACTCATTTGAT+TGG | 0.381256 | 6_4:-1574514 | Msa0970100:CDS |
| GCAGATCCTTCTGCCAATAT+AGG | 0.382735 | 6_4:+1574437 | None:intergenic |
| GAGCATAGAATGGTATTTCC+AGG | 0.388661 | 6_4:+1575687 | None:intergenic |
| TGATCATGGATTCAAGCATC+TGG | 0.395013 | 6_4:+1574903 | None:intergenic |
| CTACATCAGTTGCTTCGGCT+CGG | 0.397785 | 6_4:+1574864 | None:intergenic |
| AGGCTTTCCAATGGACTCAT+AGG | 0.405256 | 6_4:+1574674 | None:intergenic |
| TGCTGGTGCCTCATCACTGC+AGG | 0.408792 | 6_4:+1574490 | None:intergenic |
| GCGTGAGACTGATGCGTTCA+TGG | 0.409117 | 6_4:-1575035 | Msa0970100:CDS |
| CGGACTGGCTTTCTGAAAGA+TGG | 0.416803 | 6_4:-1575825 | Msa0970100:CDS |
| ATGGTGGCCCGTGGTGATCT+TGG | 0.421038 | 6_4:-1575016 | Msa0970100:CDS |
| TAACTCATTGATATCATCTC+TGG | 0.422361 | 6_4:+1575735 | None:intergenic |
| AGAATCTACAGATGCAATTC+TGG | 0.426172 | 6_4:-1574399 | Msa0970100:CDS |
| TAAGGAAGATATTCTTGAAT+GGG | 0.428016 | 6_4:-1575514 | Msa0970100:CDS |
| TACATCAGTTGCTTCGGCTC+GGG | 0.429321 | 6_4:+1574865 | None:intergenic |
| GATTTCATAATCAGTAGTTA+TGG | 0.432621 | 6_4:+1575767 | None:intergenic |
| CTTAAGTCAGCAACACAAAA+GGG | 0.437722 | 6_4:-1574368 | Msa0970100:CDS |
| AATCTTGTCTGTGGTAGTTC+CGG | 0.438220 | 6_4:-1574540 | Msa0970100:CDS |
| CTGCCTGTCCACTTGAAGCC+TGG | 0.442454 | 6_4:-1575705 | Msa0970100:CDS |
| AACTACTGATTATGAAATCA+AGG | 0.451183 | 6_4:-1575763 | Msa0970100:CDS |
| AGAAAGCCAGTCCGAATCTC+AGG | 0.453908 | 6_4:+1575834 | None:intergenic |
| GTAGCCAATGCAGTTCTTGA+TGG | 0.460232 | 6_4:-1574845 | Msa0970100:CDS |
| TGAATATAGCACCATAATCA+AGG | 0.462445 | 6_4:+1574723 | None:intergenic |
| AATGAGTCTGTGGTCAAAAC+CGG | 0.463086 | 6_4:+1574521 | None:intergenic |
| CTGTCAAAACTCTGCAATGT+TGG | 0.465660 | 6_4:-1575601 | Msa0970100:CDS |
| TCTTAAGTCAGCAACACAAA+AGG | 0.468356 | 6_4:-1574369 | Msa0970100:CDS |
| ATTGGCTACATCAGTTGCTT+CGG | 0.471027 | 6_4:+1574859 | None:intergenic |
| CCAAGTTAGTTGCTAAGTAT+AGG | 0.476764 | 6_4:-1574574 | Msa0970100:CDS |
| TTAGGAACACGACCATCGTT+TGG | 0.481093 | 6_4:+1576759 | None:intergenic |
| CAAAAGGGGCTTTGTAAACC+TGG | 0.486157 | 6_4:-1574353 | Msa0970100:CDS |
| TCCATTGCCTATGAGTCCAT+TGG | 0.486716 | 6_4:-1574681 | Msa0970100:CDS |
| CAGGGGCCTGAGATTCGGAC+TGG | 0.487007 | 6_4:-1575840 | Msa0970100:CDS |
| TTAATGTCCGCAAGGTTCTC+GGG | 0.488664 | 6_4:-1575431 | Msa0970100:CDS |
| GGAACTACCACAGACAAGAT+TGG | 0.490094 | 6_4:+1574542 | None:intergenic |
| GCTTCGGCTCGGGTTGGCCG+AGG | 0.492369 | 6_4:+1574875 | None:intergenic |
| TGTCAAAACTCTGCAATGTT+GGG | 0.494616 | 6_4:-1575600 | Msa0970100:CDS |
| ATAAGGAAGATATTCTTGAA+TGG | 0.496374 | 6_4:-1575515 | Msa0970100:CDS |
| CACTCTTACTGACAAGGATA+AGG | 0.497352 | 6_4:-1575532 | Msa0970100:CDS |
| CTTATCCTTGTCAGTAAGAG+TGG | 0.498847 | 6_4:+1575533 | None:intergenic |
| ACCGACTGTGTCATGCTTAG+TGG | 0.500132 | 6_4:-1574821 | Msa0970100:CDS |
| GGAAGATCCACCACAACACC+GGG | 0.501796 | 6_4:+1575555 | None:intergenic |
| CTATATTCAAAGAGATGATA+AGG | 0.502593 | 6_4:-1574709 | Msa0970100:CDS |
| TTTCCAGGCTTCAAGTGGAC+AGG | 0.509567 | 6_4:+1575702 | None:intergenic |
| CTTAGTGGTGAAAGTGCTGC+TGG | 0.513325 | 6_4:-1574806 | Msa0970100:CDS |
| CAATCATATCAATATTGTTA+GGG | 0.517496 | 6_4:+1575487 | None:intergenic |
| GCTCTTTCATTTGTTCGTAA+GGG | 0.518972 | 6_4:-1575465 | Msa0970100:CDS |
| TGGTACTCATGAATATCATC+AGG | 0.520603 | 6_4:-1576634 | Msa0970100:CDS |
| TGAACTTGCTGTCAAAATCA+TGG | 0.526619 | 6_4:-1574774 | Msa0970100:CDS |
| CACGACAATGAGTTTCGCTC+TGG | 0.526714 | 6_4:+1574619 | None:intergenic |
| AAGTCTGCTATGCATTCTAC+TGG | 0.527158 | 6_4:-1576594 | Msa0970100:CDS |
| AATACCATTCTATGCTCTGA+TGG | 0.528435 | 6_4:-1575681 | Msa0970100:CDS |
| TTCCATTCCAAGATCACCAC+GGG | 0.528799 | 6_4:+1575009 | None:intergenic |
| ATGTCGAACATAGACATTGA+AGG | 0.535384 | 6_4:-1576798 | Msa0970100:CDS |
| ATCTCAACAGATCTCGAAGC+AGG | 0.538705 | 6_4:+1576711 | None:intergenic |
| ACAGACAAGATTGGAACTGC+TGG | 0.538859 | 6_4:+1574551 | None:intergenic |
| CCAGGAAAATCTTCTCAACT+GGG | 0.540531 | 6_4:+1574984 | None:intergenic |
| CCTATACTTAGCAACTAACT+TGG | 0.544461 | 6_4:+1574574 | None:intergenic |
| AAACCTATTCAACTCAAAGA+AGG | 0.544786 | 6_4:-1575801 | Msa0970100:CDS |
| TGGCCGAGGAGACTTGATCA+TGG | 0.546979 | 6_4:+1574889 | None:intergenic |
| TCAGTTGCTTCGGCTCGGGT+TGG | 0.547204 | 6_4:+1574869 | None:intergenic |
| ATCTGGGTAGCAGTCACCAC+AGG | 0.548128 | 6_4:+1574920 | None:intergenic |
| TTGTCCTGTGATCAAGAAGC+CGG | 0.554022 | 6_4:-1575639 | Msa0970100:CDS |
| TGGTATTTCCAGGCTTCAAG+TGG | 0.557830 | 6_4:+1575697 | None:intergenic |
| ACTCTGCAATGTTGGGTGAG+AGG | 0.560793 | 6_4:-1575593 | Msa0970100:CDS |
| TGCGTACAGCAGATGATGCA+AGG | 0.569708 | 6_4:+1574654 | None:intergenic |
| AGAGCAACAACGGCGTCACC+AGG | 0.569748 | 6_4:+1574335 | None:intergenic |
| TCCAATGGACTCATAGGCAA+TGG | 0.571271 | 6_4:+1574680 | None:intergenic |
| CAATCTCCCCGGTGTTGTGG+TGG | 0.573486 | 6_4:-1575562 | Msa0970100:CDS |
| GGTTCCATCAAGAACTGCAT+TGG | 0.573593 | 6_4:+1574841 | None:intergenic |
| ACAGCGACATCTAACAGTAC+CGG | 0.574440 | 6_4:+1575620 | None:intergenic |
| GCATATTCAGTTGATGTCAA+AGG | 0.575993 | 6_4:-1575397 | Msa0970100:intron |
| TGTTCCATCAGAGCATAGAA+TGG | 0.578771 | 6_4:+1575677 | None:intergenic |
| TTGATTCCTATATTGGCAGA+AGG | 0.579355 | 6_4:-1574443 | Msa0970100:CDS |
| AGCAGACTTGAGATTATCGA+GGG | 0.582018 | 6_4:+1576608 | None:intergenic |
| TGTCAATCTCCCCGGTGTTG+TGG | 0.583886 | 6_4:-1575565 | Msa0970100:CDS |
| TGTCGAACATAGACATTGAA+GGG | 0.588964 | 6_4:-1576797 | Msa0970100:CDS |
| GATCATGGATTCAAGCATCT+GGG | 0.589960 | 6_4:+1574904 | None:intergenic |
| GGGAAGATCCACCACAACAC+CGG | 0.590389 | 6_4:+1575554 | None:intergenic |
| CTCATTGTCGTGCTGACACG+AGG | 0.591073 | 6_4:-1574608 | Msa0970100:CDS |
| TTATCCTTGTCAGTAAGAGT+GGG | 0.593774 | 6_4:+1575534 | None:intergenic |
| AATCCATGATCAAGTCTCCT+CGG | 0.597161 | 6_4:-1574892 | Msa0970100:CDS |
| TGATCTTGTTAATGTCCGCA+AGG | 0.600121 | 6_4:-1575439 | Msa0970100:CDS |
| GGCCCGTGGTGATCTTGGAA+TGG | 0.607650 | 6_4:-1575011 | Msa0970100:CDS |
| AGCAGTTCCAATCTTGTCTG+TGG | 0.608373 | 6_4:-1574549 | Msa0970100:CDS |
| ACTACTGATTATGAAATCAA+GGG | 0.609026 | 6_4:-1575762 | Msa0970100:CDS |
| TGCCGTCATGCTCGACACCA+AGG | 0.609600 | 6_4:-1576562 | Msa0970100:intron |
| GATGATGCAAGGCTTTCCAA+TGG | 0.615392 | 6_4:+1574665 | None:intergenic |
| GAATATAGCACCATAATCAA+GGG | 0.615983 | 6_4:+1574724 | None:intergenic |
| AAGGAAGATATTCTTGAATG+GGG | 0.623075 | 6_4:-1575513 | Msa0970100:CDS |
| TTGTCGTGCTGACACGAGGT+GGG | 0.624494 | 6_4:-1574604 | Msa0970100:CDS |
| ACCACTAAGCATGACACAGT+CGG | 0.629348 | 6_4:+1574820 | None:intergenic |
| TTCAAGGTTGAGAATCAGGA+GGG | 0.631704 | 6_4:-1575082 | Msa0970100:intron |
| AGTACCGGCTTCTTGATCAC+AGG | 0.634918 | 6_4:+1575635 | None:intergenic |
| TTTCAAGGTTGAGAATCAGG+AGG | 0.635083 | 6_4:-1575083 | Msa0970100:intron |
| TTAAGTCAGCAACACAAAAG+GGG | 0.635960 | 6_4:-1574367 | Msa0970100:CDS |
| GATGCGTTCATGGTGGCCCG+TGG | 0.637855 | 6_4:-1575025 | Msa0970100:CDS |
| AACTGAATATGCTTAGCATG+TGG | 0.639472 | 6_4:+1575408 | None:intergenic |
| ATTGTCGTGCTGACACGAGG+TGG | 0.639978 | 6_4:-1574605 | Msa0970100:CDS |
| GGTCCAATCAAATGAGTCTG+TGG | 0.640580 | 6_4:+1574511 | None:intergenic |
| TAGCAGACTTGAGATTATCG+AGG | 0.648969 | 6_4:+1576607 | None:intergenic |
| AACCTTGGTGTCGAGCATGA+CGG | 0.653974 | 6_4:+1576560 | None:intergenic |
| TGATTGGACCTGCAGTGATG+AGG | 0.656525 | 6_4:-1574498 | Msa0970100:CDS |
| TCTTCCCACTCTTACTGACA+AGG | 0.660905 | 6_4:-1575538 | Msa0970100:CDS |
| GCAGTGATGAGGCACCAGCA+AGG | 0.676635 | 6_4:-1574487 | Msa0970100:CDS |
| AATACGATGAAGAGCAACAA+CGG | 0.684681 | 6_4:+1574325 | None:intergenic |
| TAATCTTGTTGGCAAGCCTG+TGG | 0.690354 | 6_4:-1574936 | Msa0970100:CDS |
| AGGCACAGCTTAATATACAG+AGG | 0.690557 | 6_4:-1574467 | Msa0970100:CDS |
| TTTCCATTCCAAGATCACCA+CGG | 0.695446 | 6_4:+1575008 | None:intergenic |
| CTGAATCAACTACCAAACGA+TGG | 0.709839 | 6_4:-1576771 | Msa0970100:CDS |
| TGAACGCATCAGTCTCACGC+AGG | 0.710992 | 6_4:+1575038 | None:intergenic |
| TGAGACTGATGCGTTCATGG+TGG | 0.741662 | 6_4:-1575032 | Msa0970100:CDS |
| CATGTGGCCCGAGAACCTTG+CGG | 0.783590 | 6_4:+1575424 | None:intergenic |
| GAAGATCCACCACAACACCG+GGG | 0.814003 | 6_4:+1575556 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTCAATTTTTGTA+AGG | - | chr6_4:1574809-1574828 | Msa0970100:CDS | 10.0% |
| !!! | CAATTTTAATAATGATATAA+AGG | - | chr6_4:1575734-1575753 | Msa0970100:CDS | 10.0% |
| !!! | GTTTTTAAATAATGATTTTG+TGG | - | chr6_4:1575971-1575990 | Msa0970100:intron | 15.0% |
| !!! | AATCAATTTTGTGTTTAATC+AGG | - | chr6_4:1574727-1574746 | Msa0970100:CDS | 20.0% |
| !! | TTGAAAAGTTGTTAATTGAA+GGG | + | chr6_4:1574759-1574778 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTTGTTAATTGA+AGG | + | chr6_4:1574760-1574779 | None:intergenic | 20.0% |
| !! | CAATCATATCAATATTGTTA+GGG | + | chr6_4:1575600-1575619 | None:intergenic | 20.0% |
| !! | ATTTATAAGTGTAATCTTGT+TGG | - | chr6_4:1576137-1576156 | Msa0970100:intron | 20.0% |
| ! | ACCAAAATTGTTTGTACTTT+GGG | - | chr6_4:1574349-1574368 | Msa0970100:CDS | 25.0% |
| ! | ATTCAAAAACTTCTTAAAGC+TGG | - | chr6_4:1574397-1574416 | Msa0970100:CDS | 25.0% |
| ! | TAGCAATAAAATAGTCTGTA+AGG | + | chr6_4:1575112-1575131 | None:intergenic | 25.0% |
| !! | ATTCTTAACGTTTTCATGTA+CGG | - | chr6_4:1575190-1575209 | Msa0970100:intron | 25.0% |
| ! | GATTTCATAATCAGTAGTTA+TGG | + | chr6_4:1575320-1575339 | None:intergenic | 25.0% |
| !! | AACTACTGATTATGAAATCA+AGG | - | chr6_4:1575321-1575340 | Msa0970100:intron | 25.0% |
| !! | ACTACTGATTATGAAATCAA+GGG | - | chr6_4:1575322-1575341 | Msa0970100:intron | 25.0% |
| ! | ATAAGGAAGATATTCTTGAA+TGG | - | chr6_4:1575569-1575588 | Msa0970100:CDS | 25.0% |
| ! | TAAGGAAGATATTCTTGAAT+GGG | - | chr6_4:1575570-1575589 | Msa0970100:CDS | 25.0% |
| ! | GCAATCATATCAATATTGTT+AGG | + | chr6_4:1575601-1575620 | None:intergenic | 25.0% |
| ! | CATTAGAAGATATATCAACA+AGG | + | chr6_4:1575822-1575841 | None:intergenic | 25.0% |
| ! | TCATATTAAACAGACAATCA+TGG | + | chr6_4:1575893-1575912 | None:intergenic | 25.0% |
| !! | TTTTGTGGAATTTCATTTCA+AGG | - | chr6_4:1575986-1576005 | Msa0970100:intron | 25.0% |
| ! | CTATATTCAAAGAGATGATA+AGG | - | chr6_4:1576375-1576394 | Msa0970100:intron | 25.0% |
| !! | GTACAAACAATTTTGGTCTT+AGG | + | chr6_4:1574346-1574365 | None:intergenic | 30.0% |
| GACCAAAATTGTTTGTACTT+TGG | - | chr6_4:1574348-1574367 | Msa0970100:CDS | 30.0% | |
| ! | ACCCAAAGTACAAACAATTT+TGG | + | chr6_4:1574353-1574372 | None:intergenic | 30.0% |
| ATAGAAACAAGAACAAACCT+TGG | + | chr6_4:1574542-1574561 | None:intergenic | 30.0% | |
| ! | TTGAACAAGTGATTTGTGTT+TGG | - | chr6_4:1574658-1574677 | Msa0970100:CDS | 30.0% |
| !!! | TTTTTTGTCTGTAGACAAAG+TGG | - | chr6_4:1575009-1575028 | Msa0970100:CDS | 30.0% |
| AAGAGAATCATAACTGTACA+AGG | + | chr6_4:1575139-1575158 | None:intergenic | 30.0% | |
| AAACCTATTCAACTCAAAGA+AGG | - | chr6_4:1575283-1575302 | Msa0970100:intron | 30.0% | |
| TAACTCATTGATATCATCTC+TGG | + | chr6_4:1575352-1575371 | None:intergenic | 30.0% | |
| AAGGAAGATATTCTTGAATG+GGG | - | chr6_4:1575571-1575590 | Msa0970100:CDS | 30.0% | |
| AACACCACAAACAAATGAAA+TGG | + | chr6_4:1575764-1575783 | None:intergenic | 30.0% | |
| TGCAATTCATTAATGGTGAA+GGG | + | chr6_4:1575796-1575815 | None:intergenic | 30.0% | |
| ATGCAATTCATTAATGGTGA+AGG | + | chr6_4:1575797-1575816 | None:intergenic | 30.0% | |
| AAGGACATGCAATTCATTAA+TGG | + | chr6_4:1575803-1575822 | None:intergenic | 30.0% | |
| GAATATAGCACCATAATCAA+GGG | + | chr6_4:1576363-1576382 | None:intergenic | 30.0% | |
| TGAATATAGCACCATAATCA+AGG | + | chr6_4:1576364-1576383 | None:intergenic | 30.0% | |
| ATGTCGAACATAGACATTGA+AGG | - | chr6_4:1574286-1574305 | Msa0970100:CDS | 35.0% | |
| TGTCGAACATAGACATTGAA+GGG | - | chr6_4:1574287-1574306 | Msa0970100:CDS | 35.0% | |
| ! | GCTCGTTTCAATTTTTCACA+TGG | - | chr6_4:1574430-1574449 | Msa0970100:CDS | 35.0% |
| TGGTACTCATGAATATCATC+AGG | - | chr6_4:1574450-1574469 | Msa0970100:CDS | 35.0% | |
| CATAGCAATAGCATAGCATA+GGG | - | chr6_4:1574567-1574586 | Msa0970100:CDS | 35.0% | |
| TTGACATTGACAATTGAGCT+AGG | + | chr6_4:1574835-1574854 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTCTGTAGACAACG+CGG | + | chr6_4:1574937-1574956 | None:intergenic | 35.0% |
| !! | TACTGTACTGTGTTTTTGCA+GGG | - | chr6_4:1575226-1575245 | Msa0970100:intron | 35.0% |
| !! | TGTCCTTCTTTGAGTTGAAT+AGG | + | chr6_4:1575289-1575308 | None:intergenic | 35.0% |
| AATACCATTCTATGCTCTGA+TGG | - | chr6_4:1575403-1575422 | Msa0970100:CDS | 35.0% | |
| TGTCAAAACTCTGCAATGTT+GGG | - | chr6_4:1575484-1575503 | Msa0970100:CDS | 35.0% | |
| TTATCCTTGTCAGTAAGAGT+GGG | + | chr6_4:1575553-1575572 | None:intergenic | 35.0% | |
| TGCTCTTTCATTTGTTCGTA+AGG | - | chr6_4:1575618-1575637 | Msa0970100:CDS | 35.0% | |
| GCTCTTTCATTTGTTCGTAA+GGG | - | chr6_4:1575619-1575638 | Msa0970100:CDS | 35.0% | |
| AACTGAATATGCTTAGCATG+TGG | + | chr6_4:1575679-1575698 | None:intergenic | 35.0% | |
| ! | GCATATTCAGTTGATGTCAA+AGG | - | chr6_4:1575687-1575706 | Msa0970100:CDS | 35.0% |
| ATCGCCATTTCATTTGTTTG+TGG | - | chr6_4:1575757-1575776 | Msa0970100:CDS | 35.0% | |
| CAATTCATTAATGGTGAAGG+GGG | + | chr6_4:1575794-1575813 | None:intergenic | 35.0% | |
| GCAATTCATTAATGGTGAAG+GGG | + | chr6_4:1575795-1575814 | None:intergenic | 35.0% | |
| ATTAAGCACGACTTCAGAAT+TGG | + | chr6_4:1575950-1575969 | None:intergenic | 35.0% | |
| !! | AATTCTGAAGTCGTGCTTAA+TGG | - | chr6_4:1575949-1575968 | Msa0970100:intron | 35.0% |
| TCATTTCAAGGTTGAGAATC+AGG | - | chr6_4:1575998-1576017 | Msa0970100:intron | 35.0% | |
| ! | AAATCATCATTTTCTGTGCC+AGG | + | chr6_4:1576121-1576140 | None:intergenic | 35.0% |
| !! | TGATTTTGACAGCAAGTTCA+GGG | + | chr6_4:1576310-1576329 | None:intergenic | 35.0% |
| !! | ATGATTTTGACAGCAAGTTC+AGG | + | chr6_4:1576311-1576330 | None:intergenic | 35.0% |
| !! | TGAACTTGCTGTCAAAATCA+TGG | - | chr6_4:1576310-1576329 | Msa0970100:intron | 35.0% |
| CCTATACTTAGCAACTAACT+TGG | + | chr6_4:1576513-1576532 | None:intergenic | 35.0% | |
| CCAAGTTAGTTGCTAAGTAT+AGG | - | chr6_4:1576510-1576529 | Msa0970100:intron | 35.0% | |
| TTGATTCCTATATTGGCAGA+AGG | - | chr6_4:1576641-1576660 | Msa0970100:CDS | 35.0% | |
| AGAATCTACAGATGCAATTC+TGG | - | chr6_4:1576685-1576704 | Msa0970100:CDS | 35.0% | |
| TCTTAAGTCAGCAACACAAA+AGG | - | chr6_4:1576715-1576734 | Msa0970100:CDS | 35.0% | |
| CTTAAGTCAGCAACACAAAA+GGG | - | chr6_4:1576716-1576735 | Msa0970100:CDS | 35.0% | |
| TTAAGTCAGCAACACAAAAG+GGG | - | chr6_4:1576717-1576736 | Msa0970100:CDS | 35.0% | |
| AATACGATGAAGAGCAACAA+CGG | + | chr6_4:1576762-1576781 | None:intergenic | 35.0% | |
| ! | CATCGTTTGGTAGTTGATTC+AGG | + | chr6_4:1574315-1574334 | None:intergenic | 40.0% |
| CTGAATCAACTACCAAACGA+TGG | - | chr6_4:1574313-1574332 | Msa0970100:CDS | 40.0% | |
| AGCAGACTTGAGATTATCGA+GGG | + | chr6_4:1574479-1574498 | None:intergenic | 40.0% | |
| TAGCAGACTTGAGATTATCG+AGG | + | chr6_4:1574480-1574499 | None:intergenic | 40.0% | |
| AAGTCTGCTATGCATTCTAC+TGG | - | chr6_4:1574490-1574509 | Msa0970100:CDS | 40.0% | |
| GCATAGCAATAGCATAGCAT+AGG | - | chr6_4:1574566-1574585 | Msa0970100:CDS | 40.0% | |
| CCTCAGCAACATGATATTGA+TGG | + | chr6_4:1574968-1574987 | None:intergenic | 40.0% | |
| CCATCAATATCATGTTGCTG+AGG | - | chr6_4:1574965-1574984 | Msa0970100:CDS | 40.0% | |
| TCGTTTGTGTGACTTTCAAG+TGG | + | chr6_4:1575049-1575068 | None:intergenic | 40.0% | |
| AAGTCACACAAACGACTGTA+AGG | - | chr6_4:1575054-1575073 | Msa0970100:CDS | 40.0% | |
| !! | CTACTGTACTGTGTTTTTGC+AGG | - | chr6_4:1575225-1575244 | Msa0970100:intron | 40.0% |
| !! | ACTGTACTGTGTTTTTGCAG+GGG | - | chr6_4:1575227-1575246 | Msa0970100:intron | 40.0% |
| GAGCATAGAATGGTATTTCC+AGG | + | chr6_4:1575400-1575419 | None:intergenic | 40.0% | |
| TGTTCCATCAGAGCATAGAA+TGG | + | chr6_4:1575410-1575429 | None:intergenic | 40.0% | |
| CTGTCAAAACTCTGCAATGT+TGG | - | chr6_4:1575483-1575502 | Msa0970100:CDS | 40.0% | |
| AGGAAAAATGTCAATCTCCC+CGG | - | chr6_4:1575511-1575530 | Msa0970100:CDS | 40.0% | |
| CTTATCCTTGTCAGTAAGAG+TGG | + | chr6_4:1575554-1575573 | None:intergenic | 40.0% | |
| CACTCTTACTGACAAGGATA+AGG | - | chr6_4:1575552-1575571 | Msa0970100:CDS | 40.0% | |
| TGATCTTGTTAATGTCCGCA+AGG | - | chr6_4:1575645-1575664 | Msa0970100:CDS | 40.0% | |
| TTTCAAGGTTGAGAATCAGG+AGG | - | chr6_4:1576001-1576020 | Msa0970100:intron | 40.0% | |
| TTCAAGGTTGAGAATCAGGA+GGG | - | chr6_4:1576002-1576021 | Msa0970100:intron | 40.0% | |
| TTTCCATTCCAAGATCACCA+CGG | + | chr6_4:1576079-1576098 | None:intergenic | 40.0% | |
| CCAGGAAAATCTTCTCAACT+GGG | + | chr6_4:1576103-1576122 | None:intergenic | 40.0% | |
| GATCATGGATTCAAGCATCT+GGG | + | chr6_4:1576183-1576202 | None:intergenic | 40.0% | |
| TGATCATGGATTCAAGCATC+TGG | + | chr6_4:1576184-1576203 | None:intergenic | 40.0% | |
| AATCCATGATCAAGTCTCCT+CGG | - | chr6_4:1576192-1576211 | Msa0970100:intron | 40.0% | |
| ATTGGCTACATCAGTTGCTT+CGG | + | chr6_4:1576228-1576247 | None:intergenic | 40.0% | |
| GCAGAATCATCCCTTGATTA+TGG | - | chr6_4:1576350-1576369 | Msa0970100:intron | 40.0% | |
| AATCTTGTCTGTGGTAGTTC+CGG | - | chr6_4:1576544-1576563 | Msa0970100:intron | 40.0% | |
| AATGAGTCTGTGGTCAAAAC+CGG | + | chr6_4:1576566-1576585 | None:intergenic | 40.0% | |
| TGACCACAGACTCATTTGAT+TGG | - | chr6_4:1576570-1576589 | Msa0970100:CDS | 40.0% | |
| TATATTAAGCTGTGCCTTGC+TGG | + | chr6_4:1576614-1576633 | None:intergenic | 40.0% | |
| AGGCACAGCTTAATATACAG+AGG | - | chr6_4:1576617-1576636 | Msa0970100:CDS | 40.0% | |
| CAGAGGCTTGATTCCTATAT+TGG | - | chr6_4:1576634-1576653 | Msa0970100:CDS | 40.0% | |
| GTTGTTGCTCTTCATCGTAT+TGG | - | chr6_4:1576761-1576780 | Msa0970100:CDS | 40.0% | |
| TTAGGAACACGACCATCGTT+TGG | + | chr6_4:1574328-1574347 | None:intergenic | 45.0% | |
| ATCTCAACAGATCTCGAAGC+AGG | + | chr6_4:1574376-1574395 | None:intergenic | 45.0% | |
| TTAGACAAGACATCCTCACC+TGG | - | chr6_4:1574860-1574879 | Msa0970100:CDS | 45.0% | |
| TAGACAAGACATCCTCACCT+GGG | - | chr6_4:1574861-1574880 | Msa0970100:CDS | 45.0% | |
| ACAAACGACTGTAAGGTCCT+AGG | - | chr6_4:1575061-1575080 | Msa0970100:CDS | 45.0% | |
| AAGGTTTGACACCTTCACCT+GGG | + | chr6_4:1575093-1575112 | None:intergenic | 45.0% | |
| TAAGGTTTGACACCTTCACC+TGG | + | chr6_4:1575094-1575113 | None:intergenic | 45.0% | |
| TGGTATTTCCAGGCTTCAAG+TGG | + | chr6_4:1575390-1575409 | None:intergenic | 45.0% | |
| TTGTCCTGTGATCAAGAAGC+CGG | - | chr6_4:1575445-1575464 | Msa0970100:CDS | 45.0% | |
| ACAGCGACATCTAACAGTAC+CGG | + | chr6_4:1575467-1575486 | None:intergenic | 45.0% | |
| TCTTCCCACTCTTACTGACA+AGG | - | chr6_4:1575546-1575565 | Msa0970100:CDS | 45.0% | |
| GTTAATGTCCGCAAGGTTCT+CGG | - | chr6_4:1575652-1575671 | Msa0970100:CDS | 45.0% | |
| TTAATGTCCGCAAGGTTCTC+GGG | - | chr6_4:1575653-1575672 | Msa0970100:CDS | 45.0% | |
| TTCCATTCCAAGATCACCAC+GGG | + | chr6_4:1576078-1576097 | None:intergenic | 45.0% | |
| ! | CCCAGTTGAGAAGATTTTCC+TGG | - | chr6_4:1576100-1576119 | Msa0970100:intron | 45.0% |
| GCCAGGAAAATCTTCTCAAC+TGG | + | chr6_4:1576104-1576123 | None:intergenic | 45.0% | |
| TAATCTTGTTGGCAAGCCTG+TGG | - | chr6_4:1576148-1576167 | Msa0970100:intron | 45.0% | |
| GTAGCCAATGCAGTTCTTGA+TGG | - | chr6_4:1576239-1576258 | Msa0970100:intron | 45.0% | |
| GGTTCCATCAAGAACTGCAT+TGG | + | chr6_4:1576246-1576265 | None:intergenic | 45.0% | |
| ACCACTAAGCATGACACAGT+CGG | + | chr6_4:1576267-1576286 | None:intergenic | 45.0% | |
| TCCATTGCCTATGAGTCCAT+TGG | - | chr6_4:1576403-1576422 | Msa0970100:intron | 45.0% | |
| ! | TCCAATGGACTCATAGGCAA+TGG | + | chr6_4:1576407-1576426 | None:intergenic | 45.0% |
| ! | AGGCTTTCCAATGGACTCAT+AGG | + | chr6_4:1576413-1576432 | None:intergenic | 45.0% |
| GATGATGCAAGGCTTTCCAA+TGG | + | chr6_4:1576422-1576441 | None:intergenic | 45.0% | |
| ACAGACAAGATTGGAACTGC+TGG | + | chr6_4:1576536-1576555 | None:intergenic | 45.0% | |
| AGCAGTTCCAATCTTGTCTG+TGG | - | chr6_4:1576535-1576554 | Msa0970100:intron | 45.0% | |
| GGAACTACCACAGACAAGAT+TGG | + | chr6_4:1576545-1576564 | None:intergenic | 45.0% | |
| GGTCCAATCAAATGAGTCTG+TGG | + | chr6_4:1576576-1576595 | None:intergenic | 45.0% | |
| GCAGATCCTTCTGCCAATAT+AGG | + | chr6_4:1576650-1576669 | None:intergenic | 45.0% | |
| ! | CAAAAGGGGCTTTGTAAACC+TGG | - | chr6_4:1576731-1576750 | Msa0970100:CDS | 45.0% |
| !! | AACCTTGGTGTCGAGCATGA+CGG | + | chr6_4:1574527-1574546 | None:intergenic | 50.0% |
| GAGATTGTGGGTACAAACCC+AGG | + | chr6_4:1574881-1574900 | None:intergenic | 50.0% | |
| ACGCACAACTGCGAGATTGT+GGG | + | chr6_4:1574893-1574912 | None:intergenic | 50.0% | |
| ! | AAGGTCCTAGGTTCTAACCC+AGG | - | chr6_4:1575073-1575092 | Msa0970100:CDS | 50.0% |
| ! | CTTCACCTGGGTTAGAACCT+AGG | + | chr6_4:1575081-1575100 | None:intergenic | 50.0% |
| ! | CTAGGTTCTAACCCAGGTGA+AGG | - | chr6_4:1575079-1575098 | Msa0970100:CDS | 50.0% |
| ! | TTTTGCAGGGGCCTGAGATT+CGG | - | chr6_4:1575239-1575258 | Msa0970100:intron | 50.0% |
| AGAAAGCCAGTCCGAATCTC+AGG | + | chr6_4:1575253-1575272 | None:intergenic | 50.0% | |
| !! | CGGACTGGCTTTCTGAAAGA+TGG | - | chr6_4:1575259-1575278 | Msa0970100:intron | 50.0% |
| TTTCCAGGCTTCAAGTGGAC+AGG | + | chr6_4:1575385-1575404 | None:intergenic | 50.0% | |
| !! | AGTACCGGCTTCTTGATCAC+AGG | + | chr6_4:1575452-1575471 | None:intergenic | 50.0% |
| ACTCTGCAATGTTGGGTGAG+AGG | - | chr6_4:1575491-1575510 | Msa0970100:CDS | 50.0% | |
| TGAGACTGATGCGTTCATGG+TGG | - | chr6_4:1576052-1576071 | Msa0970100:intron | 50.0% | |
| TACATCAGTTGCTTCGGCTC+GGG | + | chr6_4:1576222-1576241 | None:intergenic | 50.0% | |
| CTACATCAGTTGCTTCGGCT+CGG | + | chr6_4:1576223-1576242 | None:intergenic | 50.0% | |
| ACCGACTGTGTCATGCTTAG+TGG | - | chr6_4:1576263-1576282 | Msa0970100:intron | 50.0% | |
| !! | CTTAGTGGTGAAAGTGCTGC+TGG | - | chr6_4:1576278-1576297 | Msa0970100:intron | 50.0% |
| TGCGTACAGCAGATGATGCA+AGG | + | chr6_4:1576433-1576452 | None:intergenic | 50.0% | |
| TGCTGTACGCACAGCCAATA+AGG | - | chr6_4:1576442-1576461 | Msa0970100:intron | 50.0% | |
| !! | GAGTTTCGCTCTGGCCTTAT+TGG | + | chr6_4:1576459-1576478 | None:intergenic | 50.0% |
| CACGACAATGAGTTTCGCTC+TGG | + | chr6_4:1576468-1576487 | None:intergenic | 50.0% | |
| TGATTGGACCTGCAGTGATG+AGG | - | chr6_4:1576586-1576605 | Msa0970100:CDS | 50.0% | |
| TGTGGGTACAAACCCAGGTG+AGG | + | chr6_4:1574876-1574895 | None:intergenic | 55.0% | |
| CACGCACAACTGCGAGATTG+TGG | + | chr6_4:1574894-1574913 | None:intergenic | 55.0% | |
| ! | TGTCAATCTCCCCGGTGTTG+TGG | - | chr6_4:1575519-1575538 | Msa0970100:CDS | 55.0% |
| GAAGATCCACCACAACACCG+GGG | + | chr6_4:1575531-1575550 | None:intergenic | 55.0% | |
| GGAAGATCCACCACAACACC+GGG | + | chr6_4:1575532-1575551 | None:intergenic | 55.0% | |
| GGGAAGATCCACCACAACAC+CGG | + | chr6_4:1575533-1575552 | None:intergenic | 55.0% | |
| TGAACGCATCAGTCTCACGC+AGG | + | chr6_4:1576049-1576068 | None:intergenic | 55.0% | |
| GCGTGAGACTGATGCGTTCA+TGG | - | chr6_4:1576049-1576068 | Msa0970100:intron | 55.0% | |
| ATCTGGGTAGCAGTCACCAC+AGG | + | chr6_4:1576167-1576186 | None:intergenic | 55.0% | |
| TGGCCGAGGAGACTTGATCA+TGG | + | chr6_4:1576198-1576217 | None:intergenic | 55.0% | |
| ! | CTCATTGTCGTGCTGACACG+AGG | - | chr6_4:1576476-1576495 | Msa0970100:intron | 55.0% |
| ! | ATTGTCGTGCTGACACGAGG+TGG | - | chr6_4:1576479-1576498 | Msa0970100:intron | 55.0% |
| ! | TTGTCGTGCTGACACGAGGT+GGG | - | chr6_4:1576480-1576499 | Msa0970100:intron | 55.0% |
| TGCCGTCATGCTCGACACCA+AGG | - | chr6_4:1574522-1574541 | Msa0970100:CDS | 60.0% | |
| CTGCCTGTCCACTTGAAGCC+TGG | - | chr6_4:1575379-1575398 | Msa0970100:intron | 60.0% | |
| !! | CAATCTCCCCGGTGTTGTGG+TGG | - | chr6_4:1575522-1575541 | Msa0970100:CDS | 60.0% |
| CATGTGGCCCGAGAACCTTG+CGG | + | chr6_4:1575663-1575682 | None:intergenic | 60.0% | |
| ATGGTGGCCCGTGGTGATCT+TGG | - | chr6_4:1576068-1576087 | Msa0970100:intron | 60.0% | |
| GGCCCGTGGTGATCTTGGAA+TGG | - | chr6_4:1576073-1576092 | Msa0970100:intron | 60.0% | |
| !! | TCAGTTGCTTCGGCTCGGGT+TGG | + | chr6_4:1576218-1576237 | None:intergenic | 60.0% |
| TGCTGGTGCCTCATCACTGC+AGG | + | chr6_4:1576597-1576616 | None:intergenic | 60.0% | |
| ! | GCAGTGATGAGGCACCAGCA+AGG | - | chr6_4:1576597-1576616 | Msa0970100:CDS | 60.0% |
| AGAGCAACAACGGCGTCACC+AGG | + | chr6_4:1576752-1576771 | None:intergenic | 60.0% | |
| CAGGGGCCTGAGATTCGGAC+TGG | - | chr6_4:1575244-1575263 | Msa0970100:intron | 65.0% | |
| GATGCGTTCATGGTGGCCCG+TGG | - | chr6_4:1576059-1576078 | Msa0970100:intron | 65.0% | |
| !! | GCTTCGGCTCGGGTTGGCCG+AGG | + | chr6_4:1576212-1576231 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 1574286 | 1576820 | 1574286 | ID=Msa0970100;Name=Msa0970100 |
| chr6_4 | mRNA | 1574286 | 1576820 | 1574286 | ID=Msa0970100-mRNA-1;Parent=Msa0970100;Name=Msa0970100-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|510 |
| chr6_4 | exon | 1576563 | 1576820 | 1576563 | ID=Msa0970100-mRNA-1:exon:793;Parent=Msa0970100-mRNA-1 |
| chr6_4 | exon | 1575398 | 1575859 | 1575398 | ID=Msa0970100-mRNA-1:exon:792;Parent=Msa0970100-mRNA-1 |
| chr6_4 | exon | 1574286 | 1575098 | 1574286 | ID=Msa0970100-mRNA-1:exon:791;Parent=Msa0970100-mRNA-1 |
| chr6_4 | CDS | 1576563 | 1576820 | 1576563 | ID=Msa0970100-mRNA-1:cds;Parent=Msa0970100-mRNA-1 |
| chr6_4 | CDS | 1575398 | 1575859 | 1575398 | ID=Msa0970100-mRNA-1:cds;Parent=Msa0970100-mRNA-1 |
| chr6_4 | CDS | 1574286 | 1575098 | 1574286 | ID=Msa0970100-mRNA-1:cds;Parent=Msa0970100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
