Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090500 | XP_013470246.1 | 96.747 | 584 | 17 | 1 | 1 | 584 | 1 | 582 | 0.0 | 1136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090500 | sp|Q9SQZ0|CAAT7_ARATH | 73.473 | 573 | 147 | 2 | 6 | 577 | 12 | 580 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090500 | A0A072VQJ0 | 96.747 | 584 | 17 | 1 | 1 | 584 | 1 | 582 | 0.0 | 1136 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0090500 | 0.838406 | 2.930959e-57 | -8.615850e-47 |
| Msa0006840 | Msa0090500 | 0.805584 | 1.244141e-49 | -8.615850e-47 |
| Msa0018470 | Msa0090500 | -0.814659 | 1.376631e-51 | -8.615850e-47 |
| Msa0034100 | Msa0090500 | -0.801848 | 7.420086e-49 | -8.615850e-47 |
| Msa0036550 | Msa0090500 | 0.864939 | 8.470849e-65 | -8.615850e-47 |
| Msa0038010 | Msa0090500 | 0.803629 | 3.181754e-49 | -8.615850e-47 |
| Msa0043840 | Msa0090500 | 0.977130 | 3.613099e-143 | -8.615850e-47 |
| Msa0045620 | Msa0090500 | 0.806722 | 7.165346e-50 | -8.615850e-47 |
| Msa0046430 | Msa0090500 | 0.842197 | 2.994574e-58 | -8.615850e-47 |
| Msa0057860 | Msa0090500 | 0.818992 | 1.467408e-52 | -8.615850e-47 |
| Msa0059880 | Msa0090500 | 0.803539 | 3.322558e-49 | -8.615850e-47 |
| Msa0081790 | Msa0090500 | -0.802071 | 6.676722e-49 | -8.615850e-47 |
| Msa0084390 | Msa0090500 | 0.849779 | 2.597529e-60 | -8.615850e-47 |
| Msa0090190 | Msa0090500 | 0.819323 | 1.233815e-52 | -8.615850e-47 |
| Msa0090500 | Msa0102920 | 0.833222 | 6.035291e-56 | -8.615850e-47 |
| Msa0090500 | Msa0121320 | 0.827686 | 1.363975e-54 | -8.615850e-47 |
| Msa0090500 | Msa0128110 | -0.809679 | 1.679518e-50 | -8.615850e-47 |
| Msa0090500 | Msa0128340 | 0.838377 | 2.981134e-57 | -8.615850e-47 |
| Msa0090500 | Msa0128740 | 0.843019 | 1.811733e-58 | -8.615850e-47 |
| Msa0090500 | Msa0129270 | 0.813953 | 1.971090e-51 | -8.615850e-47 |
| Msa0090500 | Msa0130710 | 0.849014 | 4.243107e-60 | -8.615850e-47 |
| Msa0090500 | Msa0132920 | -0.800830 | 1.198657e-48 | -8.615850e-47 |
| Msa0090500 | Msa0137010 | -0.803774 | 2.969570e-49 | -8.615850e-47 |
| Msa0090500 | Msa0137760 | 0.843448 | 1.392880e-58 | -8.615850e-47 |
| Msa0090500 | Msa0137970 | 0.992041 | 5.741618e-191 | -8.615850e-47 |
| Msa0090500 | Msa0140870 | -0.803383 | 3.578808e-49 | -8.615850e-47 |
| Msa0090500 | Msa0147680 | 0.839479 | 1.545826e-57 | -8.615850e-47 |
| Msa0090500 | Msa0164170 | 0.804372 | 2.229606e-49 | -8.615850e-47 |
| Msa0090500 | Msa0166180 | 0.836214 | 1.066791e-56 | -8.615850e-47 |
| Msa0090500 | Msa0176600 | 0.863846 | 1.859665e-64 | -8.615850e-47 |
| Msa0090500 | Msa0182840 | 0.830833 | 2.350370e-55 | -8.615850e-47 |
| Msa0090500 | Msa0183920 | 0.972339 | 1.325021e-134 | -8.615850e-47 |
| Msa0090500 | Msa0195140 | -0.809736 | 1.632474e-50 | -8.615850e-47 |
| Msa0090500 | Msa0206370 | 0.800322 | 1.521891e-48 | -8.615850e-47 |
| Msa0090500 | Msa0211460 | 0.802324 | 5.921479e-49 | -8.615850e-47 |
| Msa0090500 | Msa0218060 | 0.816066 | 6.696665e-52 | -8.615850e-47 |
| Msa0090500 | Msa0219840 | 0.804717 | 1.889444e-49 | -8.615850e-47 |
| Msa0090500 | Msa0221460 | -0.819332 | 1.227912e-52 | -8.615850e-47 |
| Msa0090500 | Msa0223050 | 0.802972 | 4.352810e-49 | -8.615850e-47 |
| Msa0090500 | Msa0225880 | -0.800092 | 1.695064e-48 | -8.615850e-47 |
| Msa0090500 | Msa0230980 | -0.813300 | 2.744037e-51 | -8.615850e-47 |
| Msa0090500 | Msa0235080 | 0.825511 | 4.503478e-54 | -8.615850e-47 |
| Msa0090500 | Msa0240590 | -0.813200 | 2.887034e-51 | -8.615850e-47 |
| Msa0090500 | Msa0244310 | 0.817601 | 3.029411e-52 | -8.615850e-47 |
| Msa0090500 | Msa0244820 | -0.824857 | 6.430994e-54 | -8.615850e-47 |
| Msa0090500 | Msa0258010 | 0.813683 | 2.261065e-51 | -8.615850e-47 |
| Msa0090500 | Msa0260980 | 0.846019 | 2.825367e-59 | -8.615850e-47 |
| Msa0090500 | Msa0264220 | 0.837264 | 5.760736e-57 | -8.615850e-47 |
| Msa0090500 | Msa0267710 | 0.841682 | 4.098681e-58 | -8.615850e-47 |
| Msa0090500 | Msa0270460 | -0.811290 | 7.538622e-51 | -8.615850e-47 |
| Msa0090500 | Msa0272990 | -0.811120 | 8.208250e-51 | -8.615850e-47 |
| Msa0090500 | Msa0273360 | 0.808433 | 3.104671e-50 | -8.615850e-47 |
| Msa0090500 | Msa0275570 | 0.807225 | 5.608454e-50 | -8.615850e-47 |
| Msa0090500 | Msa0276780 | 0.800022 | 1.751168e-48 | -8.615850e-47 |
| Msa0090500 | Msa0278940 | 0.807179 | 5.735900e-50 | -8.615850e-47 |
| Msa0090500 | Msa0279090 | -0.813644 | 2.305838e-51 | -8.615850e-47 |
| Msa0090500 | Msa0279810 | 0.806719 | 7.174181e-50 | -8.615850e-47 |
| Msa0090500 | Msa0300670 | -0.826510 | 2.607135e-54 | -8.615850e-47 |
| Msa0090500 | Msa0316000 | 0.804969 | 1.673536e-49 | -8.615850e-47 |
| Msa0090500 | Msa0319220 | 0.812801 | 3.531154e-51 | -8.615850e-47 |
| Msa0090500 | Msa0321240 | 0.808728 | 2.686116e-50 | -8.615850e-47 |
| Msa0090500 | Msa0328870 | 0.804783 | 1.829936e-49 | -8.615850e-47 |
| Msa0090500 | Msa0336430 | 0.837026 | 6.624765e-57 | -8.615850e-47 |
| Msa0090500 | Msa0336520 | 0.843917 | 1.043244e-58 | -8.615850e-47 |
| Msa0090500 | Msa0336640 | 0.805323 | 1.411352e-49 | -8.615850e-47 |
| Msa0090500 | Msa0337760 | -0.820596 | 6.308971e-53 | -8.615850e-47 |
| Msa0090500 | Msa0349930 | 0.800470 | 1.419981e-48 | -8.615850e-47 |
| Msa0090500 | Msa0367590 | -0.802560 | 5.295541e-49 | -8.615850e-47 |
| Msa0090500 | Msa0369880 | 0.818172 | 2.252002e-52 | -8.615850e-47 |
| Msa0090500 | Msa0374560 | 0.805918 | 1.058660e-49 | -8.615850e-47 |
| Msa0090500 | Msa0375550 | 0.835246 | 1.876731e-56 | -8.615850e-47 |
| Msa0090500 | Msa0378390 | 0.825250 | 5.193410e-54 | -8.615850e-47 |
| Msa0090500 | Msa0424240 | 0.848076 | 7.716341e-60 | -8.615850e-47 |
| Msa0090500 | Msa0427740 | 0.821379 | 4.166329e-53 | -8.615850e-47 |
| Msa0090500 | Msa0427970 | 0.822212 | 2.672822e-53 | -8.615850e-47 |
| Msa0090500 | Msa0430040 | -0.853700 | 2.008787e-61 | -8.615850e-47 |
| Msa0090500 | Msa0444200 | 0.832358 | 9.891747e-56 | -8.615850e-47 |
| Msa0090500 | Msa0460220 | -0.805610 | 1.228176e-49 | -8.615850e-47 |
| Msa0090500 | Msa0478400 | 0.848092 | 7.636400e-60 | -8.615850e-47 |
| Msa0090500 | Msa0481050 | -0.840610 | 7.838214e-58 | -8.615850e-47 |
| Msa0090500 | Msa0491760 | 0.801021 | 1.095785e-48 | -8.615850e-47 |
| Msa0090500 | Msa0491770 | 0.800036 | 1.739992e-48 | -8.615850e-47 |
| Msa0090500 | Msa0500490 | -0.834261 | 3.319741e-56 | -8.615850e-47 |
| Msa0090500 | Msa0518570 | 0.821583 | 3.737650e-53 | -8.615850e-47 |
| Msa0090500 | Msa0521940 | 0.812770 | 3.587173e-51 | -8.615850e-47 |
| Msa0090500 | Msa0525400 | 0.810440 | 1.151738e-50 | -8.615850e-47 |
| Msa0090500 | Msa0529360 | 0.819726 | 9.980654e-53 | -8.615850e-47 |
| Msa0090500 | Msa0530660 | 0.820132 | 8.062783e-53 | -8.615850e-47 |
| Msa0090500 | Msa0538520 | 0.802523 | 5.388062e-49 | -8.615850e-47 |
| Msa0090500 | Msa0541880 | 0.819698 | 1.012926e-52 | -8.615850e-47 |
| Msa0090500 | Msa0541940 | 0.826265 | 2.981964e-54 | -8.615850e-47 |
| Msa0090500 | Msa0549870 | 0.821402 | 4.114793e-53 | -8.615850e-47 |
| Msa0090500 | Msa0566090 | -0.802622 | 5.140051e-49 | -8.615850e-47 |
| Msa0090500 | Msa0566460 | 0.803337 | 3.658568e-49 | -8.615850e-47 |
| Msa0090500 | Msa0568460 | -0.804219 | 2.399852e-49 | -8.615850e-47 |
| Msa0090500 | Msa0568920 | 0.800655 | 1.301927e-48 | -8.615850e-47 |
| Msa0090500 | Msa0575950 | 0.857900 | 1.191001e-62 | -8.615850e-47 |
| Msa0090500 | Msa0576330 | 0.807542 | 4.804589e-50 | -8.615850e-47 |
| Msa0090500 | Msa0584970 | 0.829803 | 4.196991e-55 | -8.615850e-47 |
| Msa0090500 | Msa0587180 | 0.844753 | 6.218154e-59 | -8.615850e-47 |
| Msa0090500 | Msa0589460 | 0.803807 | 2.922555e-49 | -8.615850e-47 |
| Msa0090500 | Msa0591260 | -0.827157 | 1.826525e-54 | -8.615850e-47 |
| Msa0090500 | Msa0605350 | 0.816363 | 5.747833e-52 | -8.615850e-47 |
| Msa0090500 | Msa0605480 | 0.808577 | 2.892701e-50 | -8.615850e-47 |
| Msa0090500 | Msa0624050 | 0.814302 | 1.650811e-51 | -8.615850e-47 |
| Msa0090500 | Msa0624930 | 0.815824 | 7.584348e-52 | -8.615850e-47 |
| Msa0090500 | Msa0626980 | 0.822359 | 2.471080e-53 | -8.615850e-47 |
| Msa0090500 | Msa0627360 | 0.826729 | 2.312450e-54 | -8.615850e-47 |
| Msa0090500 | Msa0646260 | 0.816405 | 5.624008e-52 | -8.615850e-47 |
| Msa0090500 | Msa0651090 | 0.813637 | 2.314165e-51 | -8.615850e-47 |
| Msa0090500 | Msa0671400 | 0.813153 | 2.956416e-51 | -8.615850e-47 |
| Msa0090500 | Msa0673940 | 0.847834 | 8.999005e-60 | -8.615850e-47 |
| Msa0090500 | Msa0676140 | 0.813562 | 2.403793e-51 | -8.615850e-47 |
| Msa0090500 | Msa0676190 | 0.827973 | 1.163490e-54 | -8.615850e-47 |
| Msa0090500 | Msa0676200 | 0.802668 | 5.030789e-49 | -8.615850e-47 |
| Msa0090500 | Msa0685610 | 0.827911 | 1.204494e-54 | -8.615850e-47 |
| Msa0090500 | Msa0701530 | -0.801274 | 9.727308e-49 | -8.615850e-47 |
| Msa0090500 | Msa0705050 | -0.804409 | 2.190483e-49 | -8.615850e-47 |
| Msa0090500 | Msa0705810 | -0.836082 | 1.152647e-56 | -8.615850e-47 |
| Msa0090500 | Msa0708020 | 0.831282 | 1.823287e-55 | -8.615850e-47 |
| Msa0090500 | Msa0715510 | 0.802163 | 6.392020e-49 | -8.615850e-47 |
| Msa0090500 | Msa0716600 | 0.833652 | 4.714981e-56 | -8.615850e-47 |
| Msa0090500 | Msa0716980 | 0.823891 | 1.084871e-53 | -8.615850e-47 |
| Msa0090500 | Msa0732970 | 0.835697 | 1.443150e-56 | -8.615850e-47 |
| Msa0090500 | Msa0735340 | 0.811082 | 8.362178e-51 | -8.615850e-47 |
| Msa0090500 | Msa0739330 | -0.816987 | 4.164588e-52 | -8.615850e-47 |
| Msa0090500 | Msa0747900 | -0.805009 | 1.641653e-49 | -8.615850e-47 |
| Msa0090500 | Msa0756440 | -0.801132 | 1.040244e-48 | -8.615850e-47 |
| Msa0090500 | Msa0756570 | 0.817112 | 3.904871e-52 | -8.615850e-47 |
| Msa0090500 | Msa0758000 | 0.809065 | 2.274481e-50 | -8.615850e-47 |
| Msa0090500 | Msa0758150 | 0.832594 | 8.645620e-56 | -8.615850e-47 |
| Msa0090500 | Msa0773960 | 0.822226 | 2.653098e-53 | -8.615850e-47 |
| Msa0090500 | Msa0782030 | -0.817448 | 3.280838e-52 | -8.615850e-47 |
| Msa0090500 | Msa0792410 | 0.800979 | 1.117687e-48 | -8.615850e-47 |
| Msa0090500 | Msa0803560 | 0.814657 | 1.378138e-51 | -8.615850e-47 |
| Msa0090500 | Msa0813630 | -0.831195 | 1.916020e-55 | -8.615850e-47 |
| Msa0090500 | Msa0817100 | 0.843138 | 1.684280e-58 | -8.615850e-47 |
| Msa0090500 | Msa0840890 | -0.802877 | 4.553048e-49 | -8.615850e-47 |
| Msa0090500 | Msa0864160 | 0.810838 | 9.446064e-51 | -8.615850e-47 |
| Msa0090500 | Msa0864730 | -0.801822 | 7.509060e-49 | -8.615850e-47 |
| Msa0090500 | Msa0864750 | -0.800324 | 1.520551e-48 | -8.615850e-47 |
| Msa0090500 | Msa0871420 | 0.852909 | 3.387996e-61 | -8.615850e-47 |
| Msa0090500 | Msa0886370 | 0.822276 | 2.582470e-53 | -8.615850e-47 |
| Msa0090500 | Msa0899730 | -0.800092 | 1.695064e-48 | -8.615850e-47 |
| Msa0090500 | Msa0902340 | 0.815708 | 8.051030e-52 | -8.615850e-47 |
| Msa0090500 | Msa0910590 | 0.820382 | 7.064939e-53 | -8.615850e-47 |
| Msa0090500 | Msa0910830 | 0.801033 | 1.089800e-48 | -8.615850e-47 |
| Msa0090500 | Msa0913500 | 0.835317 | 1.800134e-56 | -8.615850e-47 |
| Msa0090500 | Msa0921860 | 0.826137 | 3.198928e-54 | -8.615850e-47 |
| Msa0090500 | Msa0924490 | 0.806556 | 7.765813e-50 | -8.615850e-47 |
| Msa0090500 | Msa0931370 | 0.970678 | 5.540695e-132 | -8.615850e-47 |
| Msa0090500 | Msa0936630 | 0.823886 | 1.088001e-53 | -8.615850e-47 |
| Msa0090500 | Msa0941520 | 0.827456 | 1.549322e-54 | -8.615850e-47 |
| Msa0090500 | Msa0948430 | 0.813278 | 2.774761e-51 | -8.615850e-47 |
| Msa0090500 | Msa0951060 | 0.823792 | 1.144489e-53 | -8.615850e-47 |
| Msa0090500 | Msa0970040 | 0.824240 | 8.983700e-54 | -8.615850e-47 |
| Msa0090500 | Msa0970100 | 0.841803 | 3.808126e-58 | -8.615850e-47 |
| Msa0090500 | Msa0973770 | 0.837975 | 3.784538e-57 | -8.615850e-47 |
| Msa0090500 | Msa0973890 | -0.820157 | 7.955750e-53 | -8.615850e-47 |
| Msa0090500 | Msa0978530 | 0.842167 | 3.050471e-58 | -8.615850e-47 |
| Msa0090500 | Msa0987550 | 0.821785 | 3.357242e-53 | -8.615850e-47 |
| Msa0090500 | Msa0999480 | -0.813351 | 2.675265e-51 | -8.615850e-47 |
| Msa0090500 | Msa1003120 | 0.802449 | 5.581893e-49 | -8.615850e-47 |
| Msa0090500 | Msa1007930 | 0.802143 | 6.453417e-49 | -8.615850e-47 |
| Msa0090500 | Msa1010470 | -0.829550 | 4.834256e-55 | -8.615850e-47 |
| Msa0090500 | Msa1011360 | 0.816996 | 4.146565e-52 | -8.615850e-47 |
| Msa0090500 | Msa1036020 | 0.866421 | 2.886340e-65 | -8.615850e-47 |
| Msa0090500 | Msa1036590 | 0.835440 | 1.675702e-56 | -8.615850e-47 |
| Msa0090500 | Msa1040330 | 0.822221 | 2.660254e-53 | -8.615850e-47 |
| Msa0090500 | Msa1040730 | 0.827995 | 1.149432e-54 | -8.615850e-47 |
| Msa0090500 | Msa1046220 | 0.806617 | 7.540803e-50 | -8.615850e-47 |
| Msa0090500 | Msa1047300 | 0.809484 | 1.850007e-50 | -8.615850e-47 |
| Msa0090500 | Msa1047320 | 0.800717 | 1.264296e-48 | -8.615850e-47 |
| Msa0090500 | Msa1047340 | 0.809875 | 1.523865e-50 | -8.615850e-47 |
| Msa0090500 | Msa1060300 | 0.809105 | 2.230629e-50 | -8.615850e-47 |
| Msa0090500 | Msa1061760 | 0.832953 | 7.043853e-56 | -8.615850e-47 |
| Msa0090500 | Msa1061780 | 0.841557 | 4.419497e-58 | -8.615850e-47 |
| Msa0090500 | Msa1067910 | -0.817279 | 3.581698e-52 | -8.615850e-47 |
| Msa0090500 | Msa1069440 | -0.804035 | 2.621047e-49 | -8.615850e-47 |
| Msa0090500 | Msa1076280 | 0.855296 | 6.936881e-62 | -8.615850e-47 |
| Msa0090500 | Msa1076830 | 0.801931 | 7.134711e-49 | -8.615850e-47 |
| Msa0090500 | Msa1076900 | 0.840223 | 9.896164e-58 | -8.615850e-47 |
| Msa0090500 | Msa1078300 | 0.859844 | 3.121999e-63 | -8.615850e-47 |
| Msa0090500 | Msa1083100 | 0.805706 | 1.172767e-49 | -8.615850e-47 |
| Msa0090500 | Msa1085560 | 0.859367 | 4.343454e-63 | -8.615850e-47 |
| Msa0090500 | Msa1085680 | 0.810920 | 9.067304e-51 | -8.615850e-47 |
| Msa0090500 | Msa1090990 | 0.805232 | 1.474679e-49 | -8.615850e-47 |
| Msa0090500 | Msa1096570 | -0.814883 | 1.227845e-51 | -8.615850e-47 |
| Msa0090500 | Msa1107330 | 0.811974 | 5.352017e-51 | -8.615850e-47 |
| Msa0090500 | Msa1109500 | -0.800383 | 1.478742e-48 | -8.615850e-47 |
| Msa0090500 | Msa1121080 | 0.816362 | 5.752038e-52 | -8.615850e-47 |
| Msa0090500 | Msa1126460 | 0.827464 | 1.541808e-54 | -8.615850e-47 |
| Msa0090500 | Msa1126530 | 0.807885 | 4.061434e-50 | -8.615850e-47 |
| Msa0090500 | Msa1127940 | 0.813646 | 2.303870e-51 | -8.615850e-47 |
| Msa0090500 | Msa1129660 | -0.800627 | 1.318574e-48 | -8.615850e-47 |
| Msa0090500 | Msa1130770 | 0.835154 | 1.979011e-56 | -8.615850e-47 |
| Msa0090500 | Msa1133440 | -0.812433 | 4.249697e-51 | -8.615850e-47 |
| Msa0090500 | Msa1134740 | 0.808898 | 2.469516e-50 | -8.615850e-47 |
| Msa0090500 | Msa1134770 | 0.847991 | 8.142640e-60 | -8.615850e-47 |
| Msa0090500 | Msa1140480 | -0.807624 | 4.615216e-50 | -8.615850e-47 |
| Msa0090500 | Msa1150860 | 0.849400 | 3.312356e-60 | -8.615850e-47 |
| Msa0090500 | Msa1150880 | 0.804403 | 2.197105e-49 | -8.615850e-47 |
| Msa0090500 | Msa1156670 | 0.809548 | 1.791975e-50 | -8.615850e-47 |
| Msa0090500 | Msa1163710 | 0.812164 | 4.865857e-51 | -8.615850e-47 |
| Msa0090500 | Msa1165860 | 0.816612 | 5.056038e-52 | -8.615850e-47 |
| Msa0090500 | Msa1171630 | 0.828723 | 7.672644e-55 | -8.615850e-47 |
| Msa0090500 | Msa1191540 | -0.804987 | 1.659184e-49 | -8.615850e-47 |
| Msa0090500 | Msa1211160 | 0.812182 | 4.821397e-51 | -8.615850e-47 |
| Msa0090500 | Msa1211260 | -0.851518 | 8.424048e-61 | -8.615850e-47 |
| Msa0090500 | Msa1211300 | -0.842069 | 3.237500e-58 | -8.615850e-47 |
| Msa0090500 | Msa1211320 | 0.826204 | 3.084360e-54 | -8.615850e-47 |
| Msa0090500 | Msa1211390 | -0.816032 | 6.815564e-52 | -8.615850e-47 |
| Msa0090500 | Msa1219780 | 0.828478 | 8.792385e-55 | -8.615850e-47 |
| Msa0090500 | Msa1220720 | 0.847451 | 1.147073e-59 | -8.615850e-47 |
| Msa0090500 | Msa1223540 | 0.812575 | 3.957053e-51 | -8.615850e-47 |
| Msa0090500 | Msa1223620 | 0.836758 | 7.757139e-57 | -8.615850e-47 |
| Msa0090500 | Msa1228460 | -0.801344 | 9.410074e-49 | -8.615850e-47 |
| Msa0090500 | Msa1243630 | -0.812872 | 3.407165e-51 | -8.615850e-47 |
| Msa0090500 | Msa1244220 | -0.812313 | 4.513479e-51 | -8.615850e-47 |
| Msa0090500 | Msa1255710 | 0.826724 | 2.318868e-54 | -8.615850e-47 |
| Msa0090500 | Msa1258100 | -0.808001 | 3.837036e-50 | -8.615850e-47 |
| Msa0090500 | Msa1259570 | 0.809969 | 1.454961e-50 | -8.615850e-47 |
| Msa0090500 | Msa1263520 | 0.828241 | 1.002824e-54 | -8.615850e-47 |
| Msa0090500 | Msa1265570 | 0.850104 | 2.106817e-60 | -8.615850e-47 |
| Msa0090500 | Msa1266710 | 0.825049 | 5.791861e-54 | -8.615850e-47 |
| Msa0090500 | Msa1270850 | -0.813959 | 1.965375e-51 | -8.615850e-47 |
| Msa0090500 | Msa1283980 | 0.821385 | 4.153862e-53 | -8.615850e-47 |
| Msa0090500 | Msa1288970 | -0.829851 | 4.085174e-55 | -8.615850e-47 |
| Msa0090500 | Msa1299310 | 0.817056 | 4.018561e-52 | -8.615850e-47 |
| Msa0090500 | Msa1299370 | -0.833974 | 3.917716e-56 | -8.615850e-47 |
| Msa0090500 | Msa1322980 | 0.811852 | 5.689663e-51 | -8.615850e-47 |
| Msa0090500 | Msa1334670 | 0.850602 | 1.527458e-60 | -8.615850e-47 |
| Msa0090500 | Msa1335200 | -0.806584 | 7.660894e-50 | -8.615850e-47 |
| Msa0090500 | Msa1335500 | 0.835886 | 1.292424e-56 | -8.615850e-47 |
| Msa0090500 | Msa1342560 | 0.804263 | 2.349345e-49 | -8.615850e-47 |
| Msa0090500 | Msa1343450 | -0.800765 | 1.236160e-48 | -8.615850e-47 |
| Msa0090500 | Msa1348330 | 0.812908 | 3.344912e-51 | -8.615850e-47 |
| Msa0090500 | Msa1349850 | -0.807820 | 4.192928e-50 | -8.615850e-47 |
| Msa0090500 | Msa1356450 | 0.822978 | 1.773177e-53 | -8.615850e-47 |
| Msa0090500 | Msa1362590 | 0.841230 | 5.390867e-58 | -8.615850e-47 |
| Msa0090500 | Msa1363690 | 0.844669 | 6.551704e-59 | -8.615850e-47 |
| Msa0090500 | Msa1365230 | 0.852467 | 4.530623e-61 | -8.615850e-47 |
| Msa0090500 | Msa1369180 | -0.830009 | 3.738482e-55 | -8.615850e-47 |
| Msa0090500 | Msa1369400 | -0.811090 | 8.330607e-51 | -8.615850e-47 |
| Msa0090500 | Msa1370930 | 0.810108 | 1.358175e-50 | -8.615850e-47 |
| Msa0090500 | Msa1371800 | 0.813401 | 2.607460e-51 | -8.615850e-47 |
| Msa0090500 | Msa1373560 | 0.812212 | 4.750078e-51 | -8.615850e-47 |
| Msa0090500 | Msa1376070 | 0.806284 | 8.864834e-50 | -8.615850e-47 |
| Msa0090500 | Msa1376310 | 0.803920 | 2.768818e-49 | -8.615850e-47 |
| Msa0090500 | Msa1377190 | 0.818725 | 1.687270e-52 | -8.615850e-47 |
| Msa0090500 | Msa1377460 | 0.844188 | 8.825815e-59 | -8.615850e-47 |
| Msa0090500 | Msa1378400 | 0.826594 | 2.489541e-54 | -8.615850e-47 |
| Msa0090500 | Msa1378950 | 0.834959 | 2.215932e-56 | -8.615850e-47 |
| Msa0090500 | Msa1379250 | 0.845011 | 5.299463e-59 | -8.615850e-47 |
| Msa0090500 | Msa1387530 | 0.805948 | 1.043178e-49 | -8.615850e-47 |
| Msa0090500 | Msa1395580 | -0.815074 | 1.113756e-51 | -8.615850e-47 |
| Msa0090500 | Msa1395720 | 0.857954 | 1.147845e-62 | -8.615850e-47 |
| Msa0090500 | Msa1396550 | 0.849163 | 3.857987e-60 | -8.615850e-47 |
| Msa0090500 | Msa1401000 | -0.802748 | 4.842984e-49 | -8.615850e-47 |
| Msa0090500 | Msa1402000 | 0.810501 | 1.117160e-50 | -8.615850e-47 |
| Msa0090500 | Msa1407210 | 0.831425 | 1.681577e-55 | -8.615850e-47 |
| Msa0090500 | Msa1409060 | 0.845079 | 5.079825e-59 | -8.615850e-47 |
| Msa0090500 | Msa1413900 | -0.857151 | 1.984528e-62 | -8.615850e-47 |
| Msa0090500 | Msa1417220 | 0.816279 | 6.002387e-52 | -8.615850e-47 |
| Msa0090500 | Msa1417950 | 0.816079 | 6.650955e-52 | -8.615850e-47 |
| Msa0090500 | Msa1421120 | 0.800699 | 1.275067e-48 | -8.615850e-47 |
| Msa0090500 | Msa1421130 | 0.805601 | 1.233553e-49 | -8.615850e-47 |
| Msa0090500 | Msa1421540 | 0.853158 | 2.874093e-61 | -8.615850e-47 |
| Msa0090500 | Msa1427600 | -0.814140 | 1.792875e-51 | -8.615850e-47 |
| Msa0090500 | Msa1434700 | 0.859066 | 5.348807e-63 | -8.615850e-47 |
| Msa0090500 | Msa1438510 | 0.822302 | 2.546931e-53 | -8.615850e-47 |
| Msa0090500 | Msa1445780 | 0.827594 | 1.434941e-54 | -8.615850e-47 |
| Msa0090500 | Msa1447900 | 0.857128 | 2.015343e-62 | -8.615850e-47 |
| Msa0090500 | Msa1450630 | -0.813040 | 3.130763e-51 | -8.615850e-47 |
| Msa0090500 | Msa1463500 | -0.800687 | 1.282410e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090500 | MtrunA17_Chr1g0210461 | 96.747 | 584 | 17 | 1 | 1 | 584 | 1 | 582 | 0.0 | 1136 |
| Msa0090500 | MtrunA17_Chr4g0055481 | 50.709 | 564 | 261 | 5 | 9 | 565 | 2 | 555 | 0.0 | 531 |
| Msa0090500 | MtrunA17_Chr8g0381021 | 42.234 | 573 | 314 | 4 | 6 | 573 | 28 | 588 | 1.83e-155 | 459 |
| Msa0090500 | MtrunA17_Chr8g0381051 | 42.539 | 583 | 313 | 5 | 6 | 583 | 33 | 598 | 2.21e-155 | 458 |
| Msa0090500 | MtrunA17_Chr2g0296921 | 41.594 | 577 | 319 | 5 | 6 | 579 | 28 | 589 | 1.44e-153 | 453 |
| Msa0090500 | MtrunA17_Chr1g0160231 | 41.034 | 580 | 310 | 6 | 6 | 579 | 23 | 576 | 5.78e-151 | 447 |
| Msa0090500 | MtrunA17_Chr8g0381031 | 41.596 | 589 | 320 | 6 | 6 | 582 | 29 | 605 | 3.30e-146 | 435 |
| Msa0090500 | MtrunA17_Chr8g0358951 | 39.894 | 564 | 321 | 4 | 7 | 567 | 36 | 584 | 1.54e-134 | 404 |
| Msa0090500 | MtrunA17_Chr7g0254011 | 37.037 | 405 | 239 | 4 | 37 | 434 | 25 | 420 | 5.70e-76 | 253 |
| Msa0090500 | MtrunA17_Chr6g0460891 | 29.276 | 608 | 344 | 11 | 23 | 554 | 6 | 603 | 6.46e-75 | 252 |
| Msa0090500 | MtrunA17_Chr7g0254061 | 34.321 | 405 | 256 | 3 | 34 | 434 | 16 | 414 | 2.27e-74 | 249 |
| Msa0090500 | MtrunA17_Chr6g0460881 | 33.976 | 415 | 263 | 4 | 24 | 434 | 18 | 425 | 1.09e-72 | 244 |
| Msa0090500 | MtrunA17_Chr6g0460911 | 34.091 | 396 | 251 | 3 | 43 | 434 | 39 | 428 | 5.97e-72 | 242 |
| Msa0090500 | MtrunA17_Chr6g0460901 | 32.701 | 422 | 268 | 4 | 24 | 441 | 24 | 433 | 1.79e-70 | 238 |
| Msa0090500 | MtrunA17_Chr7g0215781 | 32.110 | 545 | 314 | 10 | 43 | 561 | 42 | 556 | 9.40e-68 | 229 |
| Msa0090500 | MtrunA17_Chr6g0463361 | 35.366 | 246 | 149 | 4 | 335 | 576 | 3 | 242 | 6.78e-43 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090500 | AT3G10600.1 | 73.473 | 573 | 147 | 2 | 6 | 577 | 12 | 580 | 0.0 | 840 |
| Msa0090500 | AT5G04770.1 | 73.592 | 568 | 149 | 1 | 8 | 574 | 15 | 582 | 0.0 | 834 |
| Msa0090500 | AT3G10600.2 | 72.374 | 438 | 116 | 2 | 141 | 577 | 1 | 434 | 0.0 | 648 |
| Msa0090500 | AT5G04770.3 | 73.103 | 435 | 116 | 1 | 141 | 574 | 1 | 435 | 0.0 | 627 |
| Msa0090500 | AT5G04770.2 | 76.744 | 387 | 89 | 1 | 8 | 393 | 15 | 401 | 0.0 | 591 |
| Msa0090500 | AT4G21120.1 | 44.288 | 569 | 303 | 4 | 6 | 572 | 26 | 582 | 8.40e-170 | 495 |
| Msa0090500 | AT2G34960.1 | 42.626 | 556 | 296 | 5 | 6 | 554 | 20 | 559 | 1.54e-145 | 432 |
| Msa0090500 | AT1G17120.1 | 41.697 | 554 | 301 | 4 | 7 | 554 | 38 | 575 | 6.19e-134 | 403 |
| Msa0090500 | AT4G21120.2 | 41.084 | 443 | 247 | 4 | 132 | 572 | 2 | 432 | 2.30e-113 | 345 |
| Msa0090500 | AT3G03720.1 | 35.385 | 390 | 242 | 3 | 49 | 434 | 23 | 406 | 4.23e-79 | 261 |
| Msa0090500 | AT5G36940.1 | 30.517 | 580 | 334 | 9 | 27 | 547 | 10 | 579 | 1.86e-78 | 259 |
| Msa0090500 | AT1G58030.1 | 34.568 | 405 | 248 | 5 | 47 | 444 | 37 | 431 | 8.07e-73 | 245 |
| Msa0090500 | AT1G05940.1 | 30.057 | 529 | 336 | 8 | 37 | 547 | 35 | 547 | 6.13e-66 | 225 |
| Msa0090500 | AT1G05940.4 | 33.002 | 403 | 253 | 4 | 37 | 432 | 35 | 427 | 1.64e-62 | 214 |
| Msa0090500 | AT1G05940.3 | 33.002 | 403 | 253 | 4 | 37 | 432 | 35 | 427 | 4.51e-62 | 214 |
| Msa0090500 | AT1G05940.2 | 27.626 | 438 | 285 | 6 | 127 | 547 | 7 | 429 | 6.75e-44 | 162 |
Find 173 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCCTCCCCACTTGTTTC+TGG | 0.088689 | 1_2:+72544183 | None:intergenic |
| CCATCATGTTCACCCTTATT+TGG | 0.151182 | 1_2:-72544658 | Msa0090500:CDS |
| TCCCCATCCGTCGGATTTAA+AGG | 0.223739 | 1_2:+72546360 | None:intergenic |
| CACCATTCTTTATTGTCTTA+TGG | 0.240699 | 1_2:-72546531 | Msa0090500:CDS |
| AAGCTAGGAAGCCAGAATTT+TGG | 0.247903 | 1_2:-72544538 | Msa0090500:CDS |
| TTGGTACACATTTCCAAATA+AGG | 0.271960 | 1_2:+72544645 | None:intergenic |
| TTGTCATTGCGTGCGCTCTT+TGG | 0.304269 | 1_2:+72547706 | None:intergenic |
| TGGCGAATTGTATAGTTAAA+AGG | 0.307829 | 1_2:-72544098 | Msa0090500:three_prime_UTR |
| CATGCTTCTTCCTTACGATA+TGG | 0.316039 | 1_2:-72546495 | Msa0090500:intron |
| TTGACAGGAGTGGATGTCTT+TGG | 0.316766 | 1_2:+72546199 | None:intergenic |
| CTCCTCGACCTTGTGTCAAT+TGG | 0.343102 | 1_2:-72544797 | Msa0090500:CDS |
| AGTGGTACACCCCAAAATTC+TGG | 0.343949 | 1_2:+72544527 | None:intergenic |
| GTTCTATCCTACGCCATTGC+TGG | 0.344585 | 1_2:-72547426 | Msa0090500:CDS |
| GGGCCATCCTATGTTAGATT+TGG | 0.346447 | 1_2:-72544443 | Msa0090500:CDS |
| TCGATTTGGTTAAACCCTTT+CGG | 0.357707 | 1_2:+72547162 | None:intergenic |
| TGATGTCAATATTCCAAAAC+TGG | 0.360124 | 1_2:+72546309 | None:intergenic |
| GCTGCTGAAAACGGTGCTTC+AGG | 0.360568 | 1_2:+72546382 | None:intergenic |
| CGACAGCAACCAAGTCGATT+TGG | 0.363725 | 1_2:+72547148 | None:intergenic |
| GAATTTGCGGCGTTTATAAC+CGG | 0.365665 | 1_2:-72547306 | Msa0090500:CDS |
| AACAATGGCGGAAGAGGTTA+AGG | 0.377344 | 1_2:-72546603 | Msa0090500:CDS |
| ATAGCATTTGTGATAGTGAT+AGG | 0.389054 | 1_2:-72546767 | Msa0090500:CDS |
| TGGTTTGACTTAGTCGGCTT+TGG | 0.390645 | 1_2:-72547525 | Msa0090500:CDS |
| TCTACTACACTTTGAAACTT+TGG | 0.394600 | 1_2:+72544285 | None:intergenic |
| TTGGTGTCTCTTCTACTAAA+TGG | 0.396142 | 1_2:-72547206 | Msa0090500:CDS |
| AGCTACCTCCGTGTCACATT+CGG | 0.398623 | 1_2:-72547330 | Msa0090500:CDS |
| GATGGATTCTCCGGGTTAGC+TGG | 0.400841 | 1_2:+72546710 | None:intergenic |
| GATATTCCTATAGGTGTCTC+TGG | 0.404482 | 1_2:-72546569 | Msa0090500:CDS |
| TGGTACACATTTCCAAATAA+GGG | 0.409219 | 1_2:+72544646 | None:intergenic |
| TGACAGGAGTGGATGTCTTT+GGG | 0.415776 | 1_2:+72546200 | None:intergenic |
| CGACGGCTTCGAGATAGTTT+CGG | 0.419362 | 1_2:+72547658 | None:intergenic |
| GGGGCTGCTGGTGTGTTTAA+CGG | 0.431190 | 1_2:-72546671 | Msa0090500:CDS |
| GATAGTTGCTATGTTGGGTC+AGG | 0.436181 | 1_2:-72546284 | Msa0090500:CDS |
| GACTTAGTCGGCTTTGGCAT+CGG | 0.437178 | 1_2:-72547519 | Msa0090500:CDS |
| GCCGTTGCTAGAAGTTTCAC+TGG | 0.443199 | 1_2:-72547246 | Msa0090500:CDS |
| ATTTATTAGAATATTAGAAC+AGG | 0.446525 | 1_2:-72544139 | Msa0090500:three_prime_UTR |
| TGAACCAAAGAATTTACAAA+AGG | 0.455423 | 1_2:+72544058 | None:intergenic |
| ATTTGGAAATGTGTACCAAC+AGG | 0.461426 | 1_2:-72544641 | Msa0090500:CDS |
| TTAAACCCTTTCGGAAAAGA+AGG | 0.461748 | 1_2:+72547171 | None:intergenic |
| GTTCTAATGTGGTCCCTGCT+TGG | 0.465997 | 1_2:-72546237 | Msa0090500:CDS |
| TCACAGTCGTTATCTGCTAC+AGG | 0.466187 | 1_2:-72547110 | Msa0090500:intron |
| GTATAGTTAAAAGGCAGCTT+AGG | 0.470166 | 1_2:-72544089 | Msa0090500:three_prime_UTR |
| GCCGTTGATATGCCGGTCGC+CGG | 0.470599 | 1_2:-72547363 | Msa0090500:CDS |
| TGTCACATTCGGTGAATTTG+CGG | 0.471941 | 1_2:-72547319 | Msa0090500:CDS |
| TTTGGCATCGGCGGAATGGT+CGG | 0.475693 | 1_2:-72547507 | Msa0090500:CDS |
| GATTTAAAGGCTGCTGAAAA+CGG | 0.476228 | 1_2:+72546373 | None:intergenic |
| GGATGGGCGTCAAGAGTGAT+AGG | 0.477130 | 1_2:-72546340 | Msa0090500:CDS |
| GCTCGTTATATGTGTGTCAT+TGG | 0.479966 | 1_2:-72546262 | Msa0090500:CDS |
| CTCCGTTGGTTTGACTTAGT+CGG | 0.484691 | 1_2:-72547531 | Msa0090500:CDS |
| ATCATTGATAGTTGCTATGT+TGG | 0.484832 | 1_2:-72546290 | Msa0090500:CDS |
| AGAAAAGCTGAGGCGTTGAC+AGG | 0.484957 | 1_2:+72546184 | None:intergenic |
| GTGGTGAATATGATATTGAC+GGG | 0.485352 | 1_2:-72546806 | Msa0090500:CDS |
| ATTGAAATTGCTGGTATCCA+TGG | 0.486937 | 1_2:+72544500 | None:intergenic |
| GCTGGAGTCTTCGTCACCAC+TGG | 0.489218 | 1_2:-72547483 | Msa0090500:CDS |
| GCTGTTTATTTAAGCTACAT+TGG | 0.489580 | 1_2:-72546641 | Msa0090500:CDS |
| ATCGGCGGAATGGTCGGCGC+TGG | 0.490636 | 1_2:-72547501 | Msa0090500:CDS |
| TCATTGATAGTTGCTATGTT+GGG | 0.491697 | 1_2:-72546289 | Msa0090500:CDS |
| ACACTTTGAAACTTTGGTCC+AGG | 0.496558 | 1_2:+72544291 | None:intergenic |
| GCTGAAGGAGATGGTTCTCT+TGG | 0.500020 | 1_2:-72544359 | Msa0090500:CDS |
| ACAGATCCAGAGACACCTAT+AGG | 0.501870 | 1_2:+72546563 | None:intergenic |
| CCAAATAAGGGTGAACATGA+TGG | 0.510084 | 1_2:+72544658 | None:intergenic |
| CGGCGGGGCCAGCGTGAACA+CGG | 0.512818 | 1_2:+72547451 | None:intergenic |
| TGTTTCAACAATGGCGGAAG+AGG | 0.512880 | 1_2:-72546609 | Msa0090500:CDS |
| GCGTAGGATAGAACAACGGC+GGG | 0.513150 | 1_2:+72547435 | None:intergenic |
| TATAGACGTTATGTGGTGGC+AGG | 0.514317 | 1_2:-72544734 | Msa0090500:CDS |
| GCCTTTAAATCCGACGGATG+GGG | 0.514364 | 1_2:-72546361 | Msa0090500:CDS |
| ATTCTGGCTTCCTAGCTTGA+GGG | 0.516360 | 1_2:+72544543 | None:intergenic |
| GGTTCTCTTGGTCAAAAGAA+TGG | 0.516382 | 1_2:-72544347 | Msa0090500:CDS |
| TGAGTTTGCCGTTGATATGC+CGG | 0.516984 | 1_2:-72547370 | Msa0090500:CDS |
| CGGCTTTGGCATCGGCGGAA+TGG | 0.518302 | 1_2:-72547511 | Msa0090500:CDS |
| GCTAACCCGGAGAATCCATC+CGG | 0.521002 | 1_2:-72546707 | Msa0090500:CDS |
| AGCCTTTAAATCCGACGGAT+GGG | 0.521965 | 1_2:-72546362 | Msa0090500:CDS |
| ATAGTTTCGGAGGCTCGAAA+AGG | 0.523429 | 1_2:+72547671 | None:intergenic |
| GCTGGTATCCATGGCATAAG+TGG | 0.525739 | 1_2:+72544509 | None:intergenic |
| TGCCATAAGACAATAAAGAA+TGG | 0.526475 | 1_2:+72546529 | None:intergenic |
| AAATGAGCCGCGTTCGAGCT+AGG | 0.526955 | 1_2:-72547578 | Msa0090500:CDS |
| CTAAAAGCACCACCGGCGAC+CGG | 0.528047 | 1_2:+72547351 | None:intergenic |
| AGAAAAGACACTGTTGGCCA+TGG | 0.528954 | 1_2:+72544701 | None:intergenic |
| GTCAAAAGAAAGTGTGGACC+TGG | 0.530721 | 1_2:-72544309 | Msa0090500:CDS |
| GGTCCCTGCTTGGTTTGCTA+AGG | 0.530992 | 1_2:-72546227 | Msa0090500:CDS |
| ATTTCACTGTCCCTCAAGCT+AGG | 0.532498 | 1_2:-72544553 | Msa0090500:CDS |
| AGCCGCGTTCGAGCTAGGTC+CGG | 0.533259 | 1_2:-72547573 | Msa0090500:CDS |
| GAACCAAAGAATTTACAAAA+GGG | 0.534320 | 1_2:+72544059 | None:intergenic |
| ACAATTCGCCACTTCTACAA+AGG | 0.536038 | 1_2:+72544110 | None:intergenic |
| AATTCTGGCTTCCTAGCTTG+AGG | 0.536324 | 1_2:+72544542 | None:intergenic |
| GCTCATTTCTTCGTAAGAAG+TGG | 0.536802 | 1_2:+72547593 | None:intergenic |
| AAAGACTCCAAATCTAACAT+AGG | 0.536990 | 1_2:+72544436 | None:intergenic |
| AGCTTTGATGCTGAAGGAGA+TGG | 0.537361 | 1_2:-72544368 | Msa0090500:CDS |
| CAGCGTGAACACGGCTAGCG+TGG | 0.537709 | 1_2:+72547460 | None:intergenic |
| GGCTGCAACCTTTGTAGAAG+TGG | 0.538857 | 1_2:-72544118 | Msa0090500:three_prime_UTR |
| GGCAAACTCAGTGTAACAAA+AGG | 0.543038 | 1_2:+72547383 | None:intergenic |
| ATCCATGATGAGATTTGCAC+CGG | 0.544589 | 1_2:+72547287 | None:intergenic |
| TGGACCTTAGCAAACCAAGC+AGG | 0.546319 | 1_2:+72546223 | None:intergenic |
| CCTATAGGAATATCTTTCAC+AGG | 0.547006 | 1_2:+72546578 | None:intergenic |
| CCAACAGGAGTAGCAAAAGC+AGG | 0.547126 | 1_2:-72544626 | Msa0090500:CDS |
| TAAATCCGACGGATGGGGAT+GGG | 0.548572 | 1_2:-72546356 | Msa0090500:CDS |
| CACGCTAGCCGTGTTCACGC+TGG | 0.553035 | 1_2:-72547459 | Msa0090500:CDS |
| AGTGGTGAATATGATATTGA+CGG | 0.558637 | 1_2:-72546807 | Msa0090500:CDS |
| GCCACGACGAGCGAAGCGAG+AGG | 0.558835 | 1_2:+72547626 | None:intergenic |
| CCTGTGAAAGATATTCCTAT+AGG | 0.559643 | 1_2:-72546578 | Msa0090500:CDS |
| TGCCAATTGACACAAGGTCG+AGG | 0.560387 | 1_2:+72544795 | None:intergenic |
| GGGGTGTACCACTTATGCCA+TGG | 0.560946 | 1_2:-72544517 | Msa0090500:CDS |
| CCACGACGAGCGAAGCGAGA+GGG | 0.564904 | 1_2:+72547627 | None:intergenic |
| GCGTCAAGAGTGATAGGAGT+GGG | 0.564953 | 1_2:-72546334 | Msa0090500:CDS |
| AGCTGAGGCGTTGACAGGAG+TGG | 0.565715 | 1_2:+72546189 | None:intergenic |
| CAGCCTTTAAATCCGACGGA+TGG | 0.565873 | 1_2:-72546363 | Msa0090500:CDS |
| AACCGGTGCAAATCTCATCA+TGG | 0.569909 | 1_2:-72547289 | Msa0090500:CDS |
| TTAAATCCGACGGATGGGGA+TGG | 0.573808 | 1_2:-72546357 | Msa0090500:CDS |
| GGTGAACATGATGGAAGTGA+AGG | 0.574843 | 1_2:+72544667 | None:intergenic |
| GCGCACGCAATGACAAGCCA+TGG | 0.574924 | 1_2:-72547699 | Msa0090500:exon |
| ACCGGCGACCGGCATATCAA+CGG | 0.575460 | 1_2:+72547362 | None:intergenic |
| ACTCCAAATCTAACATAGGA+TGG | 0.575981 | 1_2:+72544440 | None:intergenic |
| AGGGTTTAACCAAATCGACT+TGG | 0.576967 | 1_2:-72547157 | Msa0090500:CDS |
| GCATGCGCAAAACCCTCCGT+TGG | 0.579109 | 1_2:-72547545 | Msa0090500:CDS |
| CATGCTAGCTTTGATGCTGA+AGG | 0.581379 | 1_2:-72544374 | Msa0090500:CDS |
| CAGTACGAGGGAAAGTTCAG+TGG | 0.581543 | 1_2:-72546825 | Msa0090500:CDS |
| CCCTCTCGCTTCGCTCGTCG+TGG | 0.582120 | 1_2:-72547627 | Msa0090500:CDS |
| TCAGCAGCCTTTAAATCCGA+CGG | 0.587420 | 1_2:-72546367 | Msa0090500:CDS |
| TGGAAGTGAAGGAAAATGAG+AGG | 0.588344 | 1_2:+72544678 | None:intergenic |
| TTCTTCGTAAGAAGTGGAGA+CGG | 0.595190 | 1_2:+72547599 | None:intergenic |
| AAAACCCGGATGGATTCTCC+GGG | 0.603672 | 1_2:+72546702 | None:intergenic |
| TTAGTCGGCTTTGGCATCGG+CGG | 0.604447 | 1_2:-72547516 | Msa0090500:CDS |
| GGGTACGTCGGCACTACAGT+TGG | 0.605215 | 1_2:-72547225 | Msa0090500:CDS |
| GGCTCGAAAAGGATGAGCCA+TGG | 0.609855 | 1_2:+72547682 | None:intergenic |
| GAGAGCGCAGAAACCAGCAA+TGG | 0.612563 | 1_2:+72547413 | None:intergenic |
| TGTGGAGTCAAAAGAAAGTG+TGG | 0.613439 | 1_2:-72544315 | Msa0090500:CDS |
| CCCAGTGAAACTTCTAGCAA+CGG | 0.614618 | 1_2:+72547245 | None:intergenic |
| GAGGTAGCTAAAAGCACCAC+CGG | 0.615563 | 1_2:+72547344 | None:intergenic |
| CCGTTGCTAGAAGTTTCACT+GGG | 0.617302 | 1_2:-72547245 | Msa0090500:CDS |
| GAGAGGAGAAAAGACACTGT+TGG | 0.618575 | 1_2:+72544695 | None:intergenic |
| CAAATTCACCGAATGTGACA+CGG | 0.619866 | 1_2:+72547322 | None:intergenic |
| TTATGATGCTGTTTCAACAA+TGG | 0.625161 | 1_2:-72546618 | Msa0090500:CDS |
| GGACCTTAGCAAACCAAGCA+GGG | 0.625965 | 1_2:+72546224 | None:intergenic |
| CAGGAGTGGATGTCTTTGGG+TGG | 0.626322 | 1_2:+72546203 | None:intergenic |
| AATGTTCACCAGAAACAAGT+GGG | 0.627062 | 1_2:-72544191 | Msa0090500:three_prime_UTR |
| CAATGTTCACCAGAAACAAG+TGG | 0.627731 | 1_2:-72544192 | Msa0090500:three_prime_UTR |
| TGGCAGGGACAACAAATCCA+TGG | 0.628251 | 1_2:-72544718 | Msa0090500:CDS |
| TGACGCCCATCCCCATCCGT+CGG | 0.629798 | 1_2:+72546351 | None:intergenic |
| GTTGATATGCCGGTCGCCGG+TGG | 0.632220 | 1_2:-72547360 | Msa0090500:CDS |
| GCAGAAACCAGCAATGGCGT+AGG | 0.632234 | 1_2:+72547419 | None:intergenic |
| CAGTGTAACAAAAGGCAGAG+AGG | 0.634699 | 1_2:+72547391 | None:intergenic |
| AACACGGCTAGCGTGGCCAG+TGG | 0.636525 | 1_2:+72547467 | None:intergenic |
| GTGTCTCTTCTACTAAATGG+AGG | 0.638692 | 1_2:-72547203 | Msa0090500:CDS |
| TGATGCTGTTTCAACAATGG+CGG | 0.639365 | 1_2:-72546615 | Msa0090500:CDS |
| CGGCTTCGAGATAGTTTCGG+AGG | 0.640626 | 1_2:+72547661 | None:intergenic |
| GTCAAGAGTGATAGGAGTGG+GGG | 0.641912 | 1_2:-72546332 | Msa0090500:CDS |
| TTCACCAGAAACAAGTGGGG+AGG | 0.643478 | 1_2:-72544187 | Msa0090500:three_prime_UTR |
| CGTCAAGAGTGATAGGAGTG+GGG | 0.646512 | 1_2:-72546333 | Msa0090500:CDS |
| ATAGACGTTATGTGGTGGCA+GGG | 0.647970 | 1_2:-72544733 | Msa0090500:CDS |
| TGTGGTCTATAGACGTTATG+TGG | 0.651018 | 1_2:-72544741 | Msa0090500:CDS |
| CAACAGGAGTAGCAAAAGCA+GGG | 0.652435 | 1_2:-72544625 | Msa0090500:CDS |
| TGTCATTGGACGTTCTAATG+TGG | 0.654710 | 1_2:-72546248 | Msa0090500:CDS |
| GCAGGGATGTTAAGTGCTTG+TGG | 0.657911 | 1_2:-72544608 | Msa0090500:CDS |
| TTACATGGTGGCAAATGCTG+TGG | 0.657960 | 1_2:-72544759 | Msa0090500:CDS |
| GAACATACCAAGAAAAGCTG+AGG | 0.660727 | 1_2:+72546174 | None:intergenic |
| TACCGGACCTAGCTCGAACG+CGG | 0.677641 | 1_2:+72547571 | None:intergenic |
| GGCGTAGGATAGAACAACGG+CGG | 0.680302 | 1_2:+72547434 | None:intergenic |
| GACTAAGTCAAACCAACGGA+GGG | 0.681694 | 1_2:+72547533 | None:intergenic |
| AGAAGTTTCACTGGGTACGT+CGG | 0.682141 | 1_2:-72547237 | Msa0090500:CDS |
| CGACTAAGTCAAACCAACGG+AGG | 0.687784 | 1_2:+72547532 | None:intergenic |
| AGCCGACTAAGTCAAACCAA+CGG | 0.693472 | 1_2:+72547529 | None:intergenic |
| AAAGAATGGTGAAATCCATG+TGG | 0.695461 | 1_2:-72544333 | Msa0090500:CDS |
| GCGAGAGGGAGTGTTAGCGA+CGG | 0.700749 | 1_2:+72547641 | None:intergenic |
| GGCGTCAAGAGTGATAGGAG+TGG | 0.702575 | 1_2:-72546335 | Msa0090500:CDS |
| AGAGTGTGCCAATTGACACA+AGG | 0.706818 | 1_2:+72544789 | None:intergenic |
| CTAACCCGGAGAATCCATCC+GGG | 0.714081 | 1_2:-72546706 | Msa0090500:CDS |
| AGTGAAACTTCTAGCAACGG+CGG | 0.717474 | 1_2:+72547248 | None:intergenic |
| AACACACCAGCAGCCCCGTG+CGG | 0.719233 | 1_2:+72546677 | None:intergenic |
| ATGTTCACCAGAAACAAGTG+GGG | 0.740342 | 1_2:-72544190 | Msa0090500:three_prime_UTR |
| GGTCTATAGACGTTATGTGG+TGG | 0.743313 | 1_2:-72544738 | Msa0090500:CDS |
| CGTAGGATAGAACAACGGCG+GGG | 0.759650 | 1_2:+72547436 | None:intergenic |
| ATTCACCGAATGTGACACGG+AGG | 0.793524 | 1_2:+72547325 | None:intergenic |
| AATGGCGTAGGATAGAACAA+CGG | 0.799373 | 1_2:+72547431 | None:intergenic |
| TGGTGAATATGATATTGACG+GGG | 0.822661 | 1_2:-72546805 | Msa0090500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAATTCTATACTA+AGG | + | chr1_2:72546236-72546255 | None:intergenic | 10.0% |
| !!! | TAGTATAGAATTATTTTTAT+TGG | - | chr1_2:72546236-72546255 | Msa0090500:CDS | 10.0% |
| !! | ATGTAATGTATTATTATGTA+TGG | - | chr1_2:72545309-72545328 | Msa0090500:intron | 15.0% |
| !! | TGTAATGTATTATTATGTAT+GGG | - | chr1_2:72545310-72545329 | Msa0090500:intron | 15.0% |
| !! | ATTTATTAGAATATTAGAAC+AGG | - | chr1_2:72547609-72547628 | Msa0090500:CDS | 15.0% |
| !! | GTAATGTATTATTATGTATG+GGG | - | chr1_2:72545311-72545330 | Msa0090500:intron | 20.0% |
| !! | TAATGTATTATTATGTATGG+GGG | - | chr1_2:72545312-72545331 | Msa0090500:intron | 20.0% |
| !! | TTCCTCTTAATTATACTATA+AGG | - | chr1_2:72545609-72545628 | Msa0090500:intron | 20.0% |
| !! | AACCTTATAGTATAATTAAG+AGG | + | chr1_2:72545614-72545633 | None:intergenic | 20.0% |
| !! | TTTATAGCTTCAACAAAATT+AGG | - | chr1_2:72545961-72545980 | Msa0090500:intron | 20.0% |
| !! | TTATAGCTTCAACAAAATTA+GGG | - | chr1_2:72545962-72545981 | Msa0090500:intron | 20.0% |
| !!! | TTTTGATAGAGATTTAGTAT+TGG | - | chr1_2:72546062-72546081 | Msa0090500:intron | 20.0% |
| !!! | TAGTGTATTTTGTATTACTA+TGG | - | chr1_2:72546338-72546357 | Msa0090500:CDS | 20.0% |
| !!! | TTGAGTTGAAAAAGAAAATA+AGG | + | chr1_2:72546527-72546546 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTTTCAACTCAAT+AGG | - | chr1_2:72546528-72546547 | Msa0090500:CDS | 20.0% |
| !!! | ATGACATTAATTTGCTTTTT+AGG | - | chr1_2:72546840-72546859 | Msa0090500:intron | 20.0% |
| !!! | TGACATTAATTTGCTTTTTA+GGG | - | chr1_2:72546841-72546860 | Msa0090500:intron | 20.0% |
| !! | TTCAAAAATATTGAAATTGC+TGG | + | chr1_2:72547260-72547279 | None:intergenic | 20.0% |
| !!! | ATTTTTGAATTTGTTTTTGC+TGG | - | chr1_2:72547271-72547290 | Msa0090500:CDS | 20.0% |
| !!! | TTTTTGAATTTGTTTTTGCT+GGG | - | chr1_2:72547272-72547291 | Msa0090500:CDS | 20.0% |
| !! | TTTTCAATTACCATATCGTA+AGG | + | chr1_2:72545266-72545285 | None:intergenic | 25.0% |
| ! | ATGGTAATTGAAAATTTGTC+TGG | - | chr1_2:72545272-72545291 | Msa0090500:intron | 25.0% |
| ! | TACTAAATCTCTATCAAAAG+AGG | + | chr1_2:72546061-72546080 | None:intergenic | 25.0% |
| ! | TTAACCTTTACCAAAAAAAG+TGG | - | chr1_2:72546132-72546151 | Msa0090500:intron | 25.0% |
| !!! | TAAATATACCACTTTTCACA+TGG | - | chr1_2:72546187-72546206 | Msa0090500:CDS | 25.0% |
| !! | ATTTTTATTGGAAGTGAAAC+TGG | - | chr1_2:72546248-72546267 | Msa0090500:CDS | 25.0% |
| !! | TTTTTATTGGAAGTGAAACT+GGG | - | chr1_2:72546249-72546268 | Msa0090500:CDS | 25.0% |
| ! | AAAAAGTTATCATTCCCATA+TGG | - | chr1_2:72546300-72546319 | Msa0090500:CDS | 25.0% |
| ! | AAAAGTTATCATTCCCATAT+GGG | - | chr1_2:72546301-72546320 | Msa0090500:CDS | 25.0% |
| ! | CTTCTGATTAGATAAATGTA+AGG | - | chr1_2:72546388-72546407 | Msa0090500:CDS | 25.0% |
| !!! | TTTTGATAGTACAATGTAAG+AGG | + | chr1_2:72546775-72546794 | None:intergenic | 25.0% |
| ! | CATCTAACTAATATTATGAG+TGG | - | chr1_2:72546804-72546823 | Msa0090500:CDS | 25.0% |
| !!! | CTAAATGACTTCAACTTTTT+TGG | - | chr1_2:72547528-72547547 | Msa0090500:CDS | 25.0% |
| !! | AATCCCTTTTGTAAATTCTT+TGG | - | chr1_2:72547686-72547705 | Msa0090500:CDS | 25.0% |
| ! | GAACCAAAGAATTTACAAAA+GGG | + | chr1_2:72547692-72547711 | None:intergenic | 25.0% |
| ! | TGAACCAAAGAATTTACAAA+AGG | + | chr1_2:72547693-72547712 | None:intergenic | 25.0% |
| !! | TTGTTCAATTTTTCAGTACG+AGG | - | chr1_2:72544910-72544929 | Msa0090500:intron | 30.0% |
| !! | TGTTCAATTTTTCAGTACGA+GGG | - | chr1_2:72544911-72544930 | Msa0090500:intron | 30.0% |
| AGTGGTGAATATGATATTGA+CGG | - | chr1_2:72544941-72544960 | Msa0090500:intron | 30.0% | |
| ! | ATAGCATTTGTGATAGTGAT+AGG | - | chr1_2:72544981-72545000 | Msa0090500:intron | 30.0% |
| !! | TTGTGATAGTGATAGGTTTT+TGG | - | chr1_2:72544988-72545007 | Msa0090500:intron | 30.0% |
| !! | ATAGTGATAGGTTTTTGGAA+AGG | - | chr1_2:72544993-72545012 | Msa0090500:intron | 30.0% |
| !! | TAGTGATAGGTTTTTGGAAA+GGG | - | chr1_2:72544994-72545013 | Msa0090500:intron | 30.0% |
| GCTGTTTATTTAAGCTACAT+TGG | - | chr1_2:72545107-72545126 | Msa0090500:intron | 30.0% | |
| !! | TTATGATGCTGTTTCAACAA+TGG | - | chr1_2:72545130-72545149 | Msa0090500:intron | 30.0% |
| CACCATTCTTTATTGTCTTA+TGG | - | chr1_2:72545217-72545236 | Msa0090500:intron | 30.0% | |
| TGCCATAAGACAATAAAGAA+TGG | + | chr1_2:72545222-72545241 | None:intergenic | 30.0% | |
| TGATGTCAATATTCCAAAAC+TGG | + | chr1_2:72545442-72545461 | None:intergenic | 30.0% | |
| ! | ATCATTGATAGTTGCTATGT+TGG | - | chr1_2:72545458-72545477 | Msa0090500:intron | 30.0% |
| ! | TCATTGATAGTTGCTATGTT+GGG | - | chr1_2:72545459-72545478 | Msa0090500:intron | 30.0% |
| !! | TTGCTGTGTTTTTAATTCCT+TGG | - | chr1_2:72545661-72545680 | Msa0090500:intron | 30.0% |
| ! | TGGGATTAATGTTTTCTGAA+TGG | - | chr1_2:72545704-72545723 | Msa0090500:intron | 30.0% |
| GATTTGTGTATTTATTCTGC+TGG | - | chr1_2:72545798-72545817 | Msa0090500:intron | 30.0% | |
| TGTTTCCTCATTAATGTGAA+TGG | - | chr1_2:72545838-72545857 | Msa0090500:intron | 30.0% | |
| GTTTCCTCATTAATGTGAAT+GGG | - | chr1_2:72545839-72545858 | Msa0090500:intron | 30.0% | |
| ATATGTTTACAAGATTACGC+TGG | + | chr1_2:72545990-72546009 | None:intergenic | 30.0% | |
| ATTGGTTAATCCCTTTCTTT+AGG | - | chr1_2:72546080-72546099 | Msa0090500:intron | 30.0% | |
| !!! | ACTTAAAAGCACTTCTCTTT+TGG | + | chr1_2:72546158-72546177 | None:intergenic | 30.0% |
| ATGTAAGGACAAAGACAATT+AGG | - | chr1_2:72546403-72546422 | Msa0090500:intron | 30.0% | |
| CTCTTGATTAGAATCATTGA+CGG | - | chr1_2:72546642-72546661 | Msa0090500:CDS | 30.0% | |
| TGAAATCCAATACATGATTG+AGG | + | chr1_2:72546711-72546730 | None:intergenic | 30.0% | |
| ! | CACACTCTTTGTATTTTACA+TGG | - | chr1_2:72546974-72546993 | Msa0090500:intron | 30.0% |
| ! | ACTCTTTGTATTTTACATGG+TGG | - | chr1_2:72546977-72546996 | Msa0090500:intron | 30.0% |
| TGGTACACATTTCCAAATAA+GGG | + | chr1_2:72547105-72547124 | None:intergenic | 30.0% | |
| TTGGTACACATTTCCAAATA+AGG | + | chr1_2:72547106-72547125 | None:intergenic | 30.0% | |
| AAAGACTCCAAATCTAACAT+AGG | + | chr1_2:72547315-72547334 | None:intergenic | 30.0% | |
| !! | TCTACTACACTTTGAAACTT+TGG | + | chr1_2:72547466-72547485 | None:intergenic | 30.0% |
| !!! | ATGACTTCAACTTTTTTGGA+TGG | - | chr1_2:72547532-72547551 | Msa0090500:CDS | 30.0% |
| TGGCGAATTGTATAGTTAAA+AGG | - | chr1_2:72547650-72547669 | Msa0090500:CDS | 30.0% | |
| ! | TTGGTGTCTCTTCTACTAAA+TGG | - | chr1_2:72544542-72544561 | Msa0090500:CDS | 35.0% |
| TTAAACCCTTTCGGAAAAGA+AGG | + | chr1_2:72544580-72544599 | None:intergenic | 35.0% | |
| !! | TCGATTTGGTTAAACCCTTT+CGG | + | chr1_2:72544589-72544608 | None:intergenic | 35.0% |
| ACTGAGTTCATCGTTTACAA+TGG | - | chr1_2:72544837-72544856 | Msa0090500:CDS | 35.0% | |
| GTGGTGAATATGATATTGAC+GGG | - | chr1_2:72544942-72544961 | Msa0090500:intron | 35.0% | |
| TGGTGAATATGATATTGACG+GGG | - | chr1_2:72544943-72544962 | Msa0090500:intron | 35.0% | |
| CCTATAGGAATATCTTTCAC+AGG | + | chr1_2:72545173-72545192 | None:intergenic | 35.0% | |
| CCTGTGAAAGATATTCCTAT+AGG | - | chr1_2:72545170-72545189 | Msa0090500:intron | 35.0% | |
| GATTTAAAGGCTGCTGAAAA+CGG | + | chr1_2:72545378-72545397 | None:intergenic | 35.0% | |
| AACGTGTGTGAATATTGTCT+GGG | - | chr1_2:72545685-72545704 | Msa0090500:intron | 35.0% | |
| GTATTCACAATCCTTCACAA+AGG | - | chr1_2:72545726-72545745 | Msa0090500:intron | 35.0% | |
| ACAATCCTTCACAAAGGAAA+GGG | - | chr1_2:72545732-72545751 | Msa0090500:intron | 35.0% | |
| AGAGGCTATATTGTTGAAGT+GGG | + | chr1_2:72545759-72545778 | None:intergenic | 35.0% | |
| TGAACCCATTCACATTAATG+AGG | + | chr1_2:72545846-72545865 | None:intergenic | 35.0% | |
| TCATAATGAAGGTGACAATG+TGG | + | chr1_2:72545879-72545898 | None:intergenic | 35.0% | |
| GCAAAAGATACACACTCAAT+CGG | + | chr1_2:72545904-72545923 | None:intergenic | 35.0% | |
| TTGCTAAAGTCTCATGATTC+CGG | + | chr1_2:72545932-72545951 | None:intergenic | 35.0% | |
| ! | AGAATTGTCTAGGATAAGTC+TGG | + | chr1_2:72546014-72546033 | None:intergenic | 35.0% |
| !! | ATCAAAAGAGGTACCACATT+TGG | + | chr1_2:72546049-72546068 | None:intergenic | 35.0% |
| TTTAGGCTCAACCACTATAT+AGG | - | chr1_2:72546097-72546116 | Msa0090500:intron | 35.0% | |
| ACCACTATATAGGTAGATTG+AGG | - | chr1_2:72546107-72546126 | Msa0090500:intron | 35.0% | |
| !!! | TTGGCCACTTTTTTTGGTAA+AGG | + | chr1_2:72546139-72546158 | None:intergenic | 35.0% |
| !!! | TCTCTTTTGGCCACTTTTTT+TGG | + | chr1_2:72546145-72546164 | None:intergenic | 35.0% |
| ACAATCATCCATGTGAAAAG+TGG | + | chr1_2:72546198-72546217 | None:intergenic | 35.0% | |
| AAAACATGTGACACCCATAT+GGG | + | chr1_2:72546317-72546336 | None:intergenic | 35.0% | |
| AAGATAGTATTTACCGAGGT+GGG | + | chr1_2:72546371-72546390 | None:intergenic | 35.0% | |
| TCAGAAGATAGTATTTACCG+AGG | + | chr1_2:72546375-72546394 | None:intergenic | 35.0% | |
| GGAGAATAATAGACCATTTC+AGG | - | chr1_2:72546549-72546568 | Msa0090500:CDS | 35.0% | |
| GAATAATAGACCATTTCAGG+TGG | - | chr1_2:72546552-72546571 | Msa0090500:CDS | 35.0% | |
| TGATTCCATACCTTCACTAT+TGG | - | chr1_2:72546603-72546622 | Msa0090500:CDS | 35.0% | |
| ATCAACTCATCCAATAGTGA+AGG | + | chr1_2:72546616-72546635 | None:intergenic | 35.0% | |
| CGTCAATGATTCTAATCAAG+AGG | + | chr1_2:72546644-72546663 | None:intergenic | 35.0% | |
| TTGTGTAGGCTACTTAAAGT+TGG | - | chr1_2:72546685-72546704 | Msa0090500:CDS | 35.0% | |
| CCTGAAATTGACATTATGTG+CGG | + | chr1_2:72546888-72546907 | None:intergenic | 35.0% | |
| CGCACATAATGTCAATTTCA+GGG | - | chr1_2:72546886-72546905 | Msa0090500:intron | 35.0% | |
| ATTTGGAAATGTGTACCAAC+AGG | - | chr1_2:72547107-72547126 | Msa0090500:intron | 35.0% | |
| ATTGAAATTGCTGGTATCCA+TGG | + | chr1_2:72547251-72547270 | None:intergenic | 35.0% | |
| ACTCCAAATCTAACATAGGA+TGG | + | chr1_2:72547311-72547330 | None:intergenic | 35.0% | |
| AAAGAATGGTGAAATCCATG+TGG | - | chr1_2:72547415-72547434 | Msa0090500:CDS | 35.0% | |
| AATGTTCACCAGAAACAAGT+GGG | - | chr1_2:72547557-72547576 | Msa0090500:CDS | 35.0% | |
| GTATAGTTAAAAGGCAGCTT+AGG | - | chr1_2:72547659-72547678 | Msa0090500:CDS | 35.0% | |
| TTCTTCGTAAGAAGTGGAGA+CGG | + | chr1_2:72544152-72544171 | None:intergenic | 40.0% | |
| GCTCATTTCTTCGTAAGAAG+TGG | + | chr1_2:72544158-72544177 | None:intergenic | 40.0% | |
| AATGGCGTAGGATAGAACAA+CGG | + | chr1_2:72544320-72544339 | None:intergenic | 40.0% | |
| GGCAAACTCAGTGTAACAAA+AGG | + | chr1_2:72544368-72544387 | None:intergenic | 40.0% | |
| CAAATTCACCGAATGTGACA+CGG | + | chr1_2:72544429-72544448 | None:intergenic | 40.0% | |
| ! | TGTCACATTCGGTGAATTTG+CGG | - | chr1_2:72544429-72544448 | Msa0090500:CDS | 40.0% |
| GAATTTGCGGCGTTTATAAC+CGG | - | chr1_2:72544442-72544461 | Msa0090500:CDS | 40.0% | |
| ATCCATGATGAGATTTGCAC+CGG | + | chr1_2:72544464-72544483 | None:intergenic | 40.0% | |
| GTGTCTCTTCTACTAAATGG+AGG | - | chr1_2:72544545-72544564 | Msa0090500:CDS | 40.0% | |
| ! | ACAGTTCCTTCTTTTCCGAA+AGG | - | chr1_2:72544571-72544590 | Msa0090500:CDS | 40.0% |
| ! | CAGTTCCTTCTTTTCCGAAA+GGG | - | chr1_2:72544572-72544591 | Msa0090500:CDS | 40.0% |
| AGGGTTTAACCAAATCGACT+TGG | - | chr1_2:72544591-72544610 | Msa0090500:CDS | 40.0% | |
| !! | GTGGTGGATATTGATCAAGA+AGG | + | chr1_2:72544676-72544695 | None:intergenic | 40.0% |
| ACAGTCACAGACAACATACA+CGG | - | chr1_2:72544701-72544720 | Msa0090500:CDS | 40.0% | |
| !! | TAGGTTTTTGGAAAGGGAGT+TGG | - | chr1_2:72545000-72545019 | Msa0090500:intron | 40.0% |
| ! | TTTTACACAACCAGCTAACC+CGG | - | chr1_2:72545028-72545047 | Msa0090500:intron | 40.0% |
| !! | TGATGCTGTTTCAACAATGG+CGG | - | chr1_2:72545133-72545152 | Msa0090500:intron | 40.0% |
| GATATTCCTATAGGTGTCTC+TGG | - | chr1_2:72545179-72545198 | Msa0090500:intron | 40.0% | |
| CATGCTTCTTCCTTACGATA+TGG | - | chr1_2:72545253-72545272 | Msa0090500:intron | 40.0% | |
| GCTCGTTATATGTGTGTCAT+TGG | - | chr1_2:72545486-72545505 | Msa0090500:intron | 40.0% | |
| TGTCATTGGACGTTCTAATG+TGG | - | chr1_2:72545500-72545519 | Msa0090500:intron | 40.0% | |
| GAACATACCAAGAAAAGCTG+AGG | + | chr1_2:72545577-72545596 | None:intergenic | 40.0% | |
| TTAAGAGGAAGCAAGCACAT+TGG | + | chr1_2:72545599-72545618 | None:intergenic | 40.0% | |
| AATATTCACACACGTTGCCA+AGG | + | chr1_2:72545681-72545700 | None:intergenic | 40.0% | |
| CAACGTGTGTGAATATTGTC+TGG | - | chr1_2:72545684-72545703 | Msa0090500:intron | 40.0% | |
| CACAATCCTTCACAAAGGAA+AGG | - | chr1_2:72545731-72545750 | Msa0090500:intron | 40.0% | |
| CAGAGGCTATATTGTTGAAG+TGG | + | chr1_2:72545760-72545779 | None:intergenic | 40.0% | |
| CACTTCAACAATATAGCCTC+TGG | - | chr1_2:72545758-72545777 | Msa0090500:intron | 40.0% | |
| ! | CTCAATCGGCTTCATAATGA+AGG | + | chr1_2:72545890-72545909 | None:intergenic | 40.0% |
| ! | TGAGTGTGTATCTTTTGCGT+TGG | - | chr1_2:72545906-72545925 | Msa0090500:intron | 40.0% |
| CTGCTACAACAGAATTGTCT+AGG | + | chr1_2:72546024-72546043 | None:intergenic | 40.0% | |
| AGTGGTTGAGCCTAAAGAAA+GGG | + | chr1_2:72546093-72546112 | None:intergenic | 40.0% | |
| TAGTGGTTGAGCCTAAAGAA+AGG | + | chr1_2:72546094-72546113 | None:intergenic | 40.0% | |
| GCCTCAATCTACCTATATAG+TGG | + | chr1_2:72546111-72546130 | None:intergenic | 40.0% | |
| GAAAACATGTGACACCCATA+TGG | + | chr1_2:72546318-72546337 | None:intergenic | 40.0% | |
| AGATAGTATTTACCGAGGTG+GGG | + | chr1_2:72546370-72546389 | None:intergenic | 40.0% | |
| GAAGATAGTATTTACCGAGG+TGG | + | chr1_2:72546372-72546391 | None:intergenic | 40.0% | |
| ! | ATGTTAAGTGTGTTGCTCTG+TGG | - | chr1_2:72546433-72546452 | Msa0090500:intron | 40.0% |
| CCAATATCTTCCACCTGAAA+TGG | + | chr1_2:72546565-72546584 | None:intergenic | 40.0% | |
| ! | CCATTTCAGGTGGAAGATAT+TGG | - | chr1_2:72546562-72546581 | Msa0090500:CDS | 40.0% |
| CTCATCCAATAGTGAAGGTA+TGG | + | chr1_2:72546611-72546630 | None:intergenic | 40.0% | |
| ! | ATGACCTTAGCTCTTTGTGT+AGG | - | chr1_2:72546671-72546690 | Msa0090500:CDS | 40.0% |
| ! | AGTTGGCCTCAATCATGTAT+TGG | - | chr1_2:72546702-72546721 | Msa0090500:CDS | 40.0% |
| CCGCACATAATGTCAATTTC+AGG | - | chr1_2:72546885-72546904 | Msa0090500:intron | 40.0% | |
| TGTGGTCTATAGACGTTATG+TGG | - | chr1_2:72547007-72547026 | Msa0090500:intron | 40.0% | |
| TGGAAGTGAAGGAAAATGAG+AGG | + | chr1_2:72547073-72547092 | None:intergenic | 40.0% | |
| CCAAATAAGGGTGAACATGA+TGG | + | chr1_2:72547093-72547112 | None:intergenic | 40.0% | |
| CCATCATGTTCACCCTTATT+TGG | - | chr1_2:72547090-72547109 | Msa0090500:intron | 40.0% | |
| ! | AAGCTAGGAAGCCAGAATTT+TGG | - | chr1_2:72547210-72547229 | Msa0090500:CDS | 40.0% |
| ! | AGCTAGGAAGCCAGAATTTT+GGG | - | chr1_2:72547211-72547230 | Msa0090500:CDS | 40.0% |
| ! | TTTTTGCTGGGATCACTTGA+TGG | - | chr1_2:72547284-72547303 | Msa0090500:CDS | 40.0% |
| ! | TTTTGCTGGGATCACTTGAT+GGG | - | chr1_2:72547285-72547304 | Msa0090500:CDS | 40.0% |
| GGTTCTCTTGGTCAAAAGAA+TGG | - | chr1_2:72547401-72547420 | Msa0090500:CDS | 40.0% | |
| !! | CACTTTCTTTTGACTCCACA+TGG | + | chr1_2:72547433-72547452 | None:intergenic | 40.0% |
| TGTGGAGTCAAAAGAAAGTG+TGG | - | chr1_2:72547433-72547452 | Msa0090500:CDS | 40.0% | |
| !! | ACACTTTGAAACTTTGGTCC+AGG | + | chr1_2:72547460-72547479 | None:intergenic | 40.0% |
| CAATGTTCACCAGAAACAAG+TGG | - | chr1_2:72547556-72547575 | Msa0090500:CDS | 40.0% | |
| ATGTTCACCAGAAACAAGTG+GGG | - | chr1_2:72547558-72547577 | Msa0090500:CDS | 40.0% | |
| ACAATTCGCCACTTCTACAA+AGG | + | chr1_2:72547641-72547660 | None:intergenic | 40.0% | |
| ATAGTTTCGGAGGCTCGAAA+AGG | + | chr1_2:72544080-72544099 | None:intergenic | 45.0% | |
| GACTAAGTCAAACCAACGGA+GGG | + | chr1_2:72544218-72544237 | None:intergenic | 45.0% | |
| !! | CTCCGTTGGTTTGACTTAGT+CGG | - | chr1_2:72544217-72544236 | Msa0090500:three_prime_UTR | 45.0% |
| AGCCGACTAAGTCAAACCAA+CGG | + | chr1_2:72544222-72544241 | None:intergenic | 45.0% | |
| ! | TGGTTTGACTTAGTCGGCTT+TGG | - | chr1_2:72544223-72544242 | Msa0090500:three_prime_UTR | 45.0% |
| CAGTGTAACAAAAGGCAGAG+AGG | + | chr1_2:72544360-72544379 | None:intergenic | 45.0% | |
| TGAGTTTGCCGTTGATATGC+CGG | - | chr1_2:72544378-72544397 | Msa0090500:CDS | 45.0% | |
| AACCGGTGCAAATCTCATCA+TGG | - | chr1_2:72544459-72544478 | Msa0090500:CDS | 45.0% | |
| AGTGAAACTTCTAGCAACGG+CGG | + | chr1_2:72544503-72544522 | None:intergenic | 45.0% | |
| CCCAGTGAAACTTCTAGCAA+CGG | + | chr1_2:72544506-72544525 | None:intergenic | 45.0% | |
| CCGTTGCTAGAAGTTTCACT+GGG | - | chr1_2:72544503-72544522 | Msa0090500:CDS | 45.0% | |
| AGAAGTTTCACTGGGTACGT+CGG | - | chr1_2:72544511-72544530 | Msa0090500:CDS | 45.0% | |
| TCACAGTCGTTATCTGCTAC+AGG | - | chr1_2:72544638-72544657 | Msa0090500:CDS | 45.0% | |
| TTGTCTGTGACTGTGCTTAG+TGG | + | chr1_2:72544695-72544714 | None:intergenic | 45.0% | |
| CAGTGTTGTGTCTCAGACAT+CGG | - | chr1_2:72544786-72544805 | Msa0090500:CDS | 45.0% | |
| ATCGGACACACTTTGATCAG+AGG | - | chr1_2:72544804-72544823 | Msa0090500:CDS | 45.0% | |
| AACGATGAACTCAGTAGCAC+CGG | + | chr1_2:72544832-72544851 | None:intergenic | 45.0% | |
| ! | AAAAACCCGGATGGATTCTC+CGG | + | chr1_2:72545050-72545069 | None:intergenic | 45.0% |
| ! | TGTTTCAACAATGGCGGAAG+AGG | - | chr1_2:72545139-72545158 | Msa0090500:intron | 45.0% |
| ! | AACAATGGCGGAAGAGGTTA+AGG | - | chr1_2:72545145-72545164 | Msa0090500:intron | 45.0% |
| ACAGATCCAGAGACACCTAT+AGG | + | chr1_2:72545188-72545207 | None:intergenic | 45.0% | |
| TCAGCAGCCTTTAAATCCGA+CGG | - | chr1_2:72545381-72545400 | Msa0090500:intron | 45.0% | |
| AGCCTTTAAATCCGACGGAT+GGG | - | chr1_2:72545386-72545405 | Msa0090500:intron | 45.0% | |
| GATAGTTGCTATGTTGGGTC+AGG | - | chr1_2:72545464-72545483 | Msa0090500:intron | 45.0% | |
| TGACAGGAGTGGATGTCTTT+GGG | + | chr1_2:72545551-72545570 | None:intergenic | 45.0% | |
| TTGACAGGAGTGGATGTCTT+TGG | + | chr1_2:72545552-72545571 | None:intergenic | 45.0% | |
| CTCTGGCTGAGATTTGATCA+GGG | - | chr1_2:72545775-72545794 | Msa0090500:intron | 45.0% | |
| TCTGGCTGAGATTTGATCAG+GGG | - | chr1_2:72545776-72545795 | Msa0090500:intron | 45.0% | |
| !! | TGTGTATCTTTTGCGTTGGC+CGG | - | chr1_2:72545910-72545929 | Msa0090500:intron | 45.0% |
| TGTTGTAGCAGCACCAAATG+TGG | - | chr1_2:72546033-72546052 | Msa0090500:intron | 45.0% | |
| GTAGCCTACACAAAGAGCTA+AGG | + | chr1_2:72546678-72546697 | None:intergenic | 45.0% | |
| AGAGTGTGCCAATTGACACA+AGG | + | chr1_2:72546962-72546981 | None:intergenic | 45.0% | |
| TTACATGGTGGCAAATGCTG+TGG | - | chr1_2:72546989-72547008 | Msa0090500:intron | 45.0% | |
| GGTCTATAGACGTTATGTGG+TGG | - | chr1_2:72547010-72547029 | Msa0090500:intron | 45.0% | |
| TATAGACGTTATGTGGTGGC+AGG | - | chr1_2:72547014-72547033 | Msa0090500:intron | 45.0% | |
| ATAGACGTTATGTGGTGGCA+GGG | - | chr1_2:72547015-72547034 | Msa0090500:intron | 45.0% | |
| AGAAAAGACACTGTTGGCCA+TGG | + | chr1_2:72547050-72547069 | None:intergenic | 45.0% | |
| GAGAGGAGAAAAGACACTGT+TGG | + | chr1_2:72547056-72547075 | None:intergenic | 45.0% | |
| ! | GGTGAACATGATGGAAGTGA+AGG | + | chr1_2:72547084-72547103 | None:intergenic | 45.0% |
| CAACAGGAGTAGCAAAAGCA+GGG | - | chr1_2:72547123-72547142 | Msa0090500:CDS | 45.0% | |
| ATTTCACTGTCCCTCAAGCT+AGG | - | chr1_2:72547195-72547214 | Msa0090500:CDS | 45.0% | |
| !! | ATTCTGGCTTCCTAGCTTGA+GGG | + | chr1_2:72547208-72547227 | None:intergenic | 45.0% |
| !! | AATTCTGGCTTCCTAGCTTG+AGG | + | chr1_2:72547209-72547228 | None:intergenic | 45.0% |
| ! | GCTAGGAAGCCAGAATTTTG+GGG | - | chr1_2:72547212-72547231 | Msa0090500:CDS | 45.0% |
| AGTGGTACACCCCAAAATTC+TGG | + | chr1_2:72547224-72547243 | None:intergenic | 45.0% | |
| GGGCCATCCTATGTTAGATT+TGG | - | chr1_2:72547305-72547324 | Msa0090500:CDS | 45.0% | |
| !! | CATGCTAGCTTTGATGCTGA+AGG | - | chr1_2:72547374-72547393 | Msa0090500:CDS | 45.0% |
| ! | AGCTTTGATGCTGAAGGAGA+TGG | - | chr1_2:72547380-72547399 | Msa0090500:CDS | 45.0% |
| ! | GTCAAAAGAAAGTGTGGACC+TGG | - | chr1_2:72547439-72547458 | Msa0090500:CDS | 45.0% |
| TTGTCATTGCGTGCGCTCTT+TGG | + | chr1_2:72544045-72544064 | None:intergenic | 50.0% | |
| CGACGGCTTCGAGATAGTTT+CGG | + | chr1_2:72544093-72544112 | None:intergenic | 50.0% | |
| CGACTAAGTCAAACCAACGG+AGG | + | chr1_2:72544219-72544238 | None:intergenic | 50.0% | |
| ! | GACTTAGTCGGCTTTGGCAT+CGG | - | chr1_2:72544229-72544248 | Msa0090500:three_prime_UTR | 50.0% |
| GTTCTATCCTACGCCATTGC+TGG | - | chr1_2:72544322-72544341 | Msa0090500:CDS | 50.0% | |
| !! | GAGGTAGCTAAAAGCACCAC+CGG | + | chr1_2:72544407-72544426 | None:intergenic | 50.0% |
| AGCTACCTCCGTGTCACATT+CGG | - | chr1_2:72544418-72544437 | Msa0090500:CDS | 50.0% | |
| ATTCACCGAATGTGACACGG+AGG | + | chr1_2:72544426-72544445 | None:intergenic | 50.0% | |
| GCCGTTGCTAGAAGTTTCAC+TGG | - | chr1_2:72544502-72544521 | Msa0090500:CDS | 50.0% | |
| CGACAGCAACCAAGTCGATT+TGG | + | chr1_2:72544603-72544622 | None:intergenic | 50.0% | |
| TCTGTGACTGTGCTTAGTGG+TGG | + | chr1_2:72544692-72544711 | None:intergenic | 50.0% | |
| ! | CACACTTTGATCAGAGGTGC+CGG | - | chr1_2:72544810-72544829 | Msa0090500:CDS | 50.0% |
| CAGTACGAGGGAAAGTTCAG+TGG | - | chr1_2:72544923-72544942 | Msa0090500:intron | 50.0% | |
| ! | AAAACCCGGATGGATTCTCC+GGG | + | chr1_2:72545049-72545068 | None:intergenic | 50.0% |
| CAGCCTTTAAATCCGACGGA+TGG | - | chr1_2:72545385-72545404 | Msa0090500:intron | 50.0% | |
| GCCTTTAAATCCGACGGATG+GGG | - | chr1_2:72545387-72545406 | Msa0090500:intron | 50.0% | |
| TCCCCATCCGTCGGATTTAA+AGG | + | chr1_2:72545391-72545410 | None:intergenic | 50.0% | |
| TTAAATCCGACGGATGGGGA+TGG | - | chr1_2:72545391-72545410 | Msa0090500:intron | 50.0% | |
| TAAATCCGACGGATGGGGAT+GGG | - | chr1_2:72545392-72545411 | Msa0090500:intron | 50.0% | |
| GCGTCAAGAGTGATAGGAGT+GGG | - | chr1_2:72545414-72545433 | Msa0090500:intron | 50.0% | |
| CGTCAAGAGTGATAGGAGTG+GGG | - | chr1_2:72545415-72545434 | Msa0090500:intron | 50.0% | |
| GTCAAGAGTGATAGGAGTGG+GGG | - | chr1_2:72545416-72545435 | Msa0090500:intron | 50.0% | |
| GTTCTAATGTGGTCCCTGCT+TGG | - | chr1_2:72545511-72545530 | Msa0090500:intron | 50.0% | |
| GGACCTTAGCAAACCAAGCA+GGG | + | chr1_2:72545527-72545546 | None:intergenic | 50.0% | |
| TGGACCTTAGCAAACCAAGC+AGG | + | chr1_2:72545528-72545547 | None:intergenic | 50.0% | |
| !! | AGAAAAGCTGAGGCGTTGAC+AGG | + | chr1_2:72545567-72545586 | None:intergenic | 50.0% |
| ! | GTCAACGCCTCAGCTTTTCT+TGG | - | chr1_2:72545567-72545586 | Msa0090500:intron | 50.0% |
| TGGGTCCCTTTCCTTTGTGA+AGG | + | chr1_2:72545740-72545759 | None:intergenic | 50.0% | |
| CCTGATCAAATCTCAGCCAG+AGG | + | chr1_2:72545777-72545796 | None:intergenic | 50.0% | |
| CCTCTGGCTGAGATTTGATC+AGG | - | chr1_2:72545774-72545793 | Msa0090500:intron | 50.0% | |
| TAGTATTTACCGAGGTGGGG+AGG | + | chr1_2:72546367-72546386 | None:intergenic | 50.0% | |
| ! | AGTGTGTTGCTCTGTGGCTT+AGG | - | chr1_2:72546439-72546458 | Msa0090500:intron | 50.0% |
| CTCCTCGACCTTGTGTCAAT+TGG | - | chr1_2:72546951-72546970 | Msa0090500:intron | 50.0% | |
| TGCCAATTGACACAAGGTCG+AGG | + | chr1_2:72546956-72546975 | None:intergenic | 50.0% | |
| TGGCAGGGACAACAAATCCA+TGG | - | chr1_2:72547030-72547049 | Msa0090500:intron | 50.0% | |
| !! | CCTGCTTTTGCTACTCCTGT+TGG | + | chr1_2:72547125-72547144 | None:intergenic | 50.0% |
| CCAACAGGAGTAGCAAAAGC+AGG | - | chr1_2:72547122-72547141 | Msa0090500:CDS | 50.0% | |
| GCAGGGATGTTAAGTGCTTG+TGG | - | chr1_2:72547140-72547159 | Msa0090500:CDS | 50.0% | |
| GCTGGTATCCATGGCATAAG+TGG | + | chr1_2:72547242-72547261 | None:intergenic | 50.0% | |
| GCTGAAGGAGATGGTTCTCT+TGG | - | chr1_2:72547389-72547408 | Msa0090500:CDS | 50.0% | |
| TTCACCAGAAACAAGTGGGG+AGG | - | chr1_2:72547561-72547580 | Msa0090500:CDS | 50.0% | |
| TCTTCCTCCCCACTTGTTTC+TGG | + | chr1_2:72547568-72547587 | None:intergenic | 50.0% | |
| GGCTGCAACCTTTGTAGAAG+TGG | - | chr1_2:72547630-72547649 | Msa0090500:CDS | 50.0% | |
| GGCTCGAAAAGGATGAGCCA+TGG | + | chr1_2:72544069-72544088 | None:intergenic | 55.0% | |
| CGGCTTCGAGATAGTTTCGG+AGG | + | chr1_2:72544090-72544109 | None:intergenic | 55.0% | |
| AAATGAGCCGCGTTCGAGCT+AGG | - | chr1_2:72544170-72544189 | Msa0090500:three_prime_UTR | 55.0% | |
| ! | GGTTTTGCGCATGCTGGTAC+CGG | + | chr1_2:72544197-72544216 | None:intergenic | 55.0% |
| ! | TTAGTCGGCTTTGGCATCGG+CGG | - | chr1_2:72544232-72544251 | Msa0090500:three_prime_UTR | 55.0% |
| !! | TTTGGCATCGGCGGAATGGT+CGG | - | chr1_2:72544241-72544260 | Msa0090500:three_prime_UTR | 55.0% |
| CGTAGGATAGAACAACGGCG+GGG | + | chr1_2:72544315-72544334 | None:intergenic | 55.0% | |
| GCGTAGGATAGAACAACGGC+GGG | + | chr1_2:72544316-72544335 | None:intergenic | 55.0% | |
| GGCGTAGGATAGAACAACGG+CGG | + | chr1_2:72544317-72544336 | None:intergenic | 55.0% | |
| GCAGAAACCAGCAATGGCGT+AGG | + | chr1_2:72544332-72544351 | None:intergenic | 55.0% | |
| ! | GAGAGCGCAGAAACCAGCAA+TGG | + | chr1_2:72544338-72544357 | None:intergenic | 55.0% |
| !! | GATGGATTCTCCGGGTTAGC+TGG | + | chr1_2:72545041-72545060 | None:intergenic | 55.0% |
| GCTAACCCGGAGAATCCATC+CGG | - | chr1_2:72545041-72545060 | Msa0090500:intron | 55.0% | |
| CTAACCCGGAGAATCCATCC+GGG | - | chr1_2:72545042-72545061 | Msa0090500:intron | 55.0% | |
| !!! | CCATCCGGGTTTTTTCCGCA+CGG | - | chr1_2:72545056-72545075 | Msa0090500:intron | 55.0% |
| !!! | CATCCGGGTTTTTTCCGCAC+GGG | - | chr1_2:72545057-72545076 | Msa0090500:intron | 55.0% |
| !!! | ATCCGGGTTTTTTCCGCACG+GGG | - | chr1_2:72545058-72545077 | Msa0090500:intron | 55.0% |
| GGGGCTGCTGGTGTGTTTAA+CGG | - | chr1_2:72545077-72545096 | Msa0090500:intron | 55.0% | |
| GCTGCTGAAAACGGTGCTTC+AGG | + | chr1_2:72545369-72545388 | None:intergenic | 55.0% | |
| GGATGGGCGTCAAGAGTGAT+AGG | - | chr1_2:72545408-72545427 | Msa0090500:intron | 55.0% | |
| GGCGTCAAGAGTGATAGGAG+TGG | - | chr1_2:72545413-72545432 | Msa0090500:intron | 55.0% | |
| ! | ATAGGAGTGGGGGCCAGTTT+TGG | - | chr1_2:72545426-72545445 | Msa0090500:intron | 55.0% |
| !! | GGTCCCTGCTTGGTTTGCTA+AGG | - | chr1_2:72545521-72545540 | Msa0090500:intron | 55.0% |
| CAGGAGTGGATGTCTTTGGG+TGG | + | chr1_2:72545548-72545567 | None:intergenic | 55.0% | |
| GGGGTGTACCACTTATGCCA+TGG | - | chr1_2:72547231-72547250 | Msa0090500:CDS | 55.0% | |
| GCGCACGCAATGACAAGCCA+TGG | - | chr1_2:72544049-72544068 | Msa0090500:three_prime_UTR | 60.0% | |
| !! | GCGAGAGGGAGTGTTAGCGA+CGG | + | chr1_2:72544110-72544129 | None:intergenic | 60.0% |
| TACCGGACCTAGCTCGAACG+CGG | + | chr1_2:72544180-72544199 | None:intergenic | 60.0% | |
| ! | ACGGAGGGTTTTGCGCATGC+TGG | + | chr1_2:72544203-72544222 | None:intergenic | 60.0% |
| GCATGCGCAAAACCCTCCGT+TGG | - | chr1_2:72544203-72544222 | Msa0090500:three_prime_UTR | 60.0% | |
| GCTGGAGTCTTCGTCACCAC+TGG | - | chr1_2:72544265-72544284 | Msa0090500:three_prime_UTR | 60.0% | |
| ACCGGCGACCGGCATATCAA+CGG | + | chr1_2:72544389-72544408 | None:intergenic | 60.0% | |
| !! | CTAAAAGCACCACCGGCGAC+CGG | + | chr1_2:72544400-72544419 | None:intergenic | 60.0% |
| GGGTACGTCGGCACTACAGT+TGG | - | chr1_2:72544523-72544542 | Msa0090500:CDS | 60.0% | |
| CCGTGCGGAAAAAACCCGGA+TGG | + | chr1_2:72545059-72545078 | None:intergenic | 60.0% | |
| AGCCCCGTGCGGAAAAAACC+CGG | + | chr1_2:72545063-72545082 | None:intergenic | 60.0% | |
| !!! | TTTTTTCCGCACGGGGCTGC+TGG | - | chr1_2:72545065-72545084 | Msa0090500:intron | 60.0% |
| !! | AGCTGAGGCGTTGACAGGAG+TGG | + | chr1_2:72545562-72545581 | None:intergenic | 60.0% |
| CTATGGTAGCCTCCCCACCT+CGG | - | chr1_2:72546355-72546374 | Msa0090500:CDS | 60.0% | |
| CCACGACGAGCGAAGCGAGA+GGG | + | chr1_2:72544124-72544143 | None:intergenic | 65.0% | |
| AGCCGCGTTCGAGCTAGGTC+CGG | - | chr1_2:72544175-72544194 | Msa0090500:three_prime_UTR | 65.0% | |
| !! | CGGCTTTGGCATCGGCGGAA+TGG | - | chr1_2:72544237-72544256 | Msa0090500:three_prime_UTR | 65.0% |
| AACACGGCTAGCGTGGCCAG+TGG | + | chr1_2:72544284-72544303 | None:intergenic | 65.0% | |
| CAGCGTGAACACGGCTAGCG+TGG | + | chr1_2:72544291-72544310 | None:intergenic | 65.0% | |
| CACGCTAGCCGTGTTCACGC+TGG | - | chr1_2:72544289-72544308 | Msa0090500:CDS | 65.0% | |
| GCCGTTGATATGCCGGTCGC+CGG | - | chr1_2:72544385-72544404 | Msa0090500:CDS | 65.0% | |
| GTTGATATGCCGGTCGCCGG+TGG | - | chr1_2:72544388-72544407 | Msa0090500:CDS | 65.0% | |
| AACACACCAGCAGCCCCGTG+CGG | + | chr1_2:72545074-72545093 | None:intergenic | 65.0% | |
| TGACGCCCATCCCCATCCGT+CGG | + | chr1_2:72545400-72545419 | None:intergenic | 65.0% | |
| CCCTCTCGCTTCGCTCGTCG+TGG | - | chr1_2:72544121-72544140 | Msa0090500:three_prime_UTR | 70.0% | |
| GCCACGACGAGCGAAGCGAG+AGG | + | chr1_2:72544125-72544144 | None:intergenic | 70.0% | |
| ATCGGCGGAATGGTCGGCGC+TGG | - | chr1_2:72544247-72544266 | Msa0090500:three_prime_UTR | 70.0% | |
| CGGCGGGGCCAGCGTGAACA+CGG | + | chr1_2:72544300-72544319 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 72544027 | 72547743 | 72544027 | ID=Msa0090500;Name=Msa0090500 |
| chr1_2 | mRNA | 72544027 | 72547743 | 72544027 | ID=Msa0090500-mRNA-1;Parent=Msa0090500;Name=Msa0090500-mRNA-1;_AED=0.03;_eAED=0.03;_QI=31|1|1|1|1|1|4|262|584 |
| chr1_2 | exon | 72544027 | 72544863 | 72544027 | ID=Msa0090500-mRNA-1:exon:25202;Parent=Msa0090500-mRNA-1 |
| chr1_2 | exon | 72546182 | 72546410 | 72546182 | ID=Msa0090500-mRNA-1:exon:25201;Parent=Msa0090500-mRNA-1 |
| chr1_2 | exon | 72546496 | 72546844 | 72546496 | ID=Msa0090500-mRNA-1:exon:25200;Parent=Msa0090500-mRNA-1 |
| chr1_2 | exon | 72547111 | 72547743 | 72547111 | ID=Msa0090500-mRNA-1:exon:25199;Parent=Msa0090500-mRNA-1 |
| chr1_2 | five_prime_UTR | 72547713 | 72547743 | 72547713 | ID=Msa0090500-mRNA-1:five_prime_utr;Parent=Msa0090500-mRNA-1 |
| chr1_2 | CDS | 72547111 | 72547712 | 72547111 | ID=Msa0090500-mRNA-1:cds;Parent=Msa0090500-mRNA-1 |
| chr1_2 | CDS | 72546496 | 72546844 | 72546496 | ID=Msa0090500-mRNA-1:cds;Parent=Msa0090500-mRNA-1 |
| chr1_2 | CDS | 72546182 | 72546410 | 72546182 | ID=Msa0090500-mRNA-1:cds;Parent=Msa0090500-mRNA-1 |
| chr1_2 | CDS | 72544289 | 72544863 | 72544289 | ID=Msa0090500-mRNA-1:cds;Parent=Msa0090500-mRNA-1 |
| chr1_2 | three_prime_UTR | 72544027 | 72544288 | 72544027 | ID=Msa0090500-mRNA-1:three_prime_utr;Parent=Msa0090500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
