AlfalfaGEDB | Msa1134740

M. sativa cultivar zhongmu-4 / Msa1134740

KEGG: -
GO: GO:0001101 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009739 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03195.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134740	XP_013447443.1	97.010	301	9	0	1	301	1	301	0.0	597

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134740	sp\|Q9M886\|LBD41_ARATH	60.351	285	69	4	1	281	1	245	2.20e-112	328

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134740	A0A072TVI9	97.010	301	9	0	1	301	1	301	0.0	597

TFs/TRs:

Gene ID	Type	Classification
Msa1134740	TF	LOB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0010210	Msa1134740	0.810720	1.001843e-50	-8.615850e-47
Msa0029730	Msa1134740	0.827049	1.939317e-54	-8.615850e-47
Msa0034100	Msa1134740	-0.808528	2.963076e-50	-8.615850e-47
Msa0043840	Msa1134740	0.809756	1.616391e-50	-8.615850e-47
Msa0085580	Msa1134740	-0.808730	2.683483e-50	-8.615850e-47
Msa0090500	Msa1134740	0.808898	2.469516e-50	-8.615850e-47
Msa0104740	Msa1134740	0.800346	1.504613e-48	-8.615850e-47
Msa0623040	Msa1134740	0.801025	1.093805e-48	-8.615850e-47
Msa0128110	Msa1134740	-0.802674	5.015477e-49	-8.615850e-47
Msa0131090	Msa1134740	-0.820488	6.681730e-53	-8.615850e-47
Msa0137970	Msa1134740	0.800250	1.574217e-48	-8.615850e-47
Msa0160650	Msa1134740	-0.816692	4.851255e-52	-8.615850e-47
Msa0169710	Msa1134740	0.809830	1.558351e-50	-8.615850e-47
Msa0228690	Msa1134740	0.802599	5.198308e-49	-8.615850e-47
Msa0380590	Msa1134740	0.844357	7.946612e-59	-8.615850e-47
Msa1031530	Msa1134740	-0.804643	1.957462e-49	-8.615850e-47
Msa1047320	Msa1134740	0.818644	1.760137e-52	-8.615850e-47
Msa1061760	Msa1134740	0.827751	1.316127e-54	-8.615850e-47
Msa0261490	Msa1134740	0.819567	1.085452e-52	-8.615850e-47
Msa0267710	Msa1134740	0.802789	4.748172e-49	-8.615850e-47
Msa1130770	Msa1134740	0.829019	6.506332e-55	-8.615850e-47
Msa1134740	Msa1134770	0.878758	2.167275e-69	-8.615850e-47
Msa1134740	Msa1150860	0.821762	3.399007e-53	-8.615850e-47
Msa1134740	Msa1171630	0.814982	1.167146e-51	-8.615850e-47
Msa1134740	Msa1190350	-0.800185	1.622459e-48	-8.615850e-47
Msa1134740	Msa1240060	0.827162	1.821892e-54	-8.615850e-47
Msa1134740	Msa1243630	-0.812905	3.351281e-51	-8.615850e-47
Msa1134740	Msa1244220	-0.812320	4.498108e-51	-8.615850e-47
Msa1134740	Msa1281370	0.831291	1.814163e-55	-8.615850e-47
Msa1134740	Msa1320530	0.817299	3.544029e-52	-8.615850e-47
Msa1134740	Msa1342560	0.941445	4.109794e-101	-8.615850e-47
Msa1134740	Msa1379940	0.817607	3.020003e-52	-8.615850e-47
Msa1134740	Msa1409060	0.806661	7.379472e-50	-8.615850e-47
Msa1134740	Msa1413900	-0.800971	1.121809e-48	-8.615850e-47
Msa1134740	Msa1447900	0.825819	3.806527e-54	-8.615850e-47
Msa0500420	Msa1134740	0.845713	3.420022e-59	-8.615850e-47
Msa0521940	Msa1134740	0.802537	5.353363e-49	-8.615850e-47
Msa0572360	Msa1134740	0.816416	5.592855e-52	-8.615850e-47
Msa0876230	Msa1134740	0.823893	1.084079e-53	-8.615850e-47
Msa0902270	Msa1134740	0.805417	1.348199e-49	-8.615850e-47
Msa0931370	Msa1134740	0.810116	1.352777e-50	-8.615850e-47
Msa0941520	Msa1134740	0.817409	3.347479e-52	-8.615850e-47
Msa0978530	Msa1134740	0.827550	1.470732e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134740	MtrunA17_Chr7g0215281	97.010	301	9	0	1	301	1	301	0.0	597
Msa1134740	MtrunA17_Chr6g0457431	80.625	160	26	2	1	160	1	155	2.15e-91	268
Msa1134740	MtrunA17_Chr6g0469271	44.395	223	114	4	1	213	1	223	7.68e-58	185
Msa1134740	MtrunA17_Chr4g0053911	50.888	169	67	2	3	159	1	165	1.45e-54	177
Msa1134740	MtrunA17_Chr6g0470651	51.149	174	68	6	1	164	1	167	1.10e-52	172
Msa1134740	MtrunA17_Chr5g0401401	64.545	110	39	0	3	112	1	110	4.76e-52	171
Msa1134740	MtrunA17_Chr6g0470631	50.575	174	69	6	1	164	1	167	1.44e-51	169
Msa1134740	MtrunA17_Chr1g0209841	42.029	207	98	5	1	196	1	196	5.22e-45	152
Msa1134740	MtrunA17_Chr1g0207471	60.577	104	41	0	3	106	1	104	5.99e-45	151

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1134740	AT3G02550.1	60.351	285	69	4	1	281	1	245	2.24e-113	328
Msa1134740	AT1G67100.1	82.270	141	22	2	1	138	1	141	1.02e-82	249
Msa1134740	AT1G68510.1	62.941	170	53	2	1	160	1	170	3.35e-74	228
Msa1134740	AT3G49940.1	70.000	110	33	0	3	112	1	110	3.02e-55	179
Msa1134740	AT5G67420.2	65.455	110	38	0	3	112	1	110	4.10e-54	177
Msa1134740	AT5G67420.1	65.455	110	38	0	3	112	1	110	4.10e-54	177
Msa1134740	AT4G37540.1	66.667	111	37	0	3	113	1	111	3.53e-53	174

Find 119 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTATCTTGTTCCACAAATT+TGG	0.171439	7_4:-1369064	Msa1134740:five_prime_UTR
AAACCGACTGAACCGTAAAT+TGG	0.188374	7_4:+1368189	None:intergenic
GTGGCATTAGCTTGTGATTC+AGG	0.204656	7_4:+1368612	None:intergenic
TTTCCACATTCAGGGAGGTT+GGG	0.280644	7_4:+1369023	None:intergenic
GGCTCATGGAATGTGGAGTT+GGG	0.290152	7_4:-1367562	Msa1134740:CDS
GGTTTGGCTTGGTTCGGTTT+TGG	0.303637	7_4:-1367516	Msa1134740:three_prime_UTR
ACTTTCTCATCTACATAGTT+TGG	0.307581	7_4:+1367330	None:intergenic
ACCAGCACGACCGTAGAATT+TGG	0.324902	7_4:+1368578	None:intergenic
TGGAGAGGAAAAGGTTGGTT+TGG	0.330903	7_4:-1367674	Msa1134740:CDS
TGTAAGTTGTAACAACTTGA+TGG	0.341415	7_4:+1367290	None:intergenic
TATCCGGCTTAGACCGGGTT+TGG	0.359852	7_4:-1367532	Msa1134740:exon
GTTGGTTTGGAGCTGACTCT+TGG	0.364251	7_4:-1367661	Msa1134740:CDS
CGAATAGTGAACCCAATTTA+CGG	0.368957	7_4:-1368201	Msa1134740:CDS
CTCTCACTGGTTCGGTCAAC+CGG	0.379598	7_4:+1367697	None:intergenic
GCAGCTGCTTCCGAAGTTAT+CGG	0.380995	7_4:+1368096	None:intergenic
TTGACATAGCTGCCAACTTC+CGG	0.388062	7_4:+1368158	None:intergenic
CTCTTCTTGTATCTTCGGCT+TGG	0.390746	7_4:+1367945	None:intergenic
CCTCTCCACTCTCACTGGTT+CGG	0.397640	7_4:+1367689	None:intergenic
GGAGTTGGGGCTTCAATATC+CGG	0.399627	7_4:-1367548	Msa1134740:CDS
GAAAAGAAGGGTTGTATTGA+AGG	0.400262	7_4:-1367596	Msa1134740:CDS
ACGTGATAAACGCGTGAAAC+CGG	0.400688	7_4:+1367631	None:intergenic
TGGCTCATGGAATGTGGAGT+TGG	0.402516	7_4:-1367563	Msa1134740:CDS
TTCCACATTCAGGGAGGTTG+GGG	0.403370	7_4:+1369024	None:intergenic
TTGGTTTGGAGCTGACTCTT+GGG	0.409856	7_4:-1367660	Msa1134740:CDS
GATCTTATTTAGAGATGAAC+CGG	0.409879	7_4:-1367740	Msa1134740:CDS
CAGTGAGAGTGGAGAGGAAA+AGG	0.413870	7_4:-1367683	Msa1134740:CDS
GGCTTAGACCGGGTTTGGCT+TGG	0.414881	7_4:-1367527	Msa1134740:exon
GTCTGAGGCGGTTGCGTTGG+TGG	0.415235	7_4:-1367800	Msa1134740:CDS
GCTGACTCTTGGGCTTGAAC+CGG	0.417029	7_4:-1367650	Msa1134740:CDS
AGACCGGGTTTGGCTTGGTT+CGG	0.417093	7_4:-1367522	Msa1134740:three_prime_UTR
CGGTTCATCACCTCCTCAAC+CGG	0.421068	7_4:+1367856	None:intergenic
CGACACATGACGGATGTCAT+AGG	0.427071	7_4:+1368047	None:intergenic
ACCGGTCGGCTCAGTTGAAC+CGG	0.430775	7_4:+1367888	None:intergenic
CTTCAATATCCGGCTTAGAC+CGG	0.432623	7_4:-1367538	Msa1134740:exon
AACCGACTGAACCGTAAATT+GGG	0.433750	7_4:+1368190	None:intergenic
ACGGTTCAGTCGGTTTATTA+TGG	0.442488	7_4:-1368182	Msa1134740:CDS
GCCGACCGGTTCGGTTGAAC+CGG	0.442999	7_4:-1367875	Msa1134740:CDS
CGAACCTGGACGAAGATGTT+CGG	0.443982	7_4:+1368530	None:intergenic
TGGCATTAGCTTGTGATTCA+GGG	0.445704	7_4:+1368613	None:intergenic
GTATATGTGTTGTATTATTG+TGG	0.446343	7_4:+1368968	None:intergenic
GAACCTGGACGAAGATGTTC+GGG	0.446611	7_4:+1368531	None:intergenic
GTATTGAAGGATTGTGGTGT+TGG	0.451012	7_4:-1367583	Msa1134740:CDS
GAGAGTGGAGAGGAAAAGGT+TGG	0.454972	7_4:-1367679	Msa1134740:CDS
CTTCGGAAGCAGCTGCTAAC+GGG	0.456571	7_4:-1368089	Msa1134740:CDS
GCCAAATTCTACGGTCGTGC+TGG	0.457716	7_4:-1368579	Msa1134740:CDS
TTCAATATCCGGCTTAGACC+GGG	0.462376	7_4:-1367537	Msa1134740:exon
CCAGTCTGAGGCGGTTGCGT+TGG	0.463877	7_4:-1367803	Msa1134740:CDS
GAAGCAGCTGCTAACGGGAG+GGG	0.464479	7_4:-1368084	Msa1134740:CDS
GTGTTTCTCGCCAAATTCTA+CGG	0.467341	7_4:-1368588	Msa1134740:CDS
TTCAACTGAGCCGACCGGTT+CGG	0.472535	7_4:-1367884	Msa1134740:CDS
CTCAACCGGTTCAACCGAAC+CGG	0.476475	7_4:+1367870	None:intergenic
GAGAACAAGGGATTTGAATC+CGG	0.487023	7_4:-1367907	Msa1134740:CDS
GAGGCGGTTGCGTTGGTGGA+TGG	0.487638	7_4:-1367796	Msa1134740:CDS
ATTTAGAGATGAACCGGAGT+TGG	0.489333	7_4:-1367734	Msa1134740:CDS
CGGTTCGGTTGAACCGGTTG+AGG	0.489995	7_4:-1367869	Msa1134740:CDS
AAGCCAAACCCGGTCTAAGC+CGG	0.498806	7_4:+1367529	None:intergenic
TGCATATGATGATGCATCAA+TGG	0.501398	7_4:+1367262	None:intergenic
TGGTTCCTGTGAAGAAAAGA+AGG	0.501528	7_4:-1367609	Msa1134740:CDS
GTTTATTATGGTCCGGAAGT+TGG	0.502610	7_4:-1368170	Msa1134740:CDS
ATGTCATAGGCTTTGAGTGG+TGG	0.508004	7_4:+1368060	None:intergenic
GAGATGAACCGGAGTTGGAC+CGG	0.508299	7_4:-1367729	Msa1134740:CDS
TGTAGATGAGAAAGTACATT+CGG	0.513037	7_4:-1367322	Msa1134740:three_prime_UTR
GACTCTTTGTTGAGTTAACT+CGG	0.513097	7_4:+1367999	None:intergenic
TCAAGTTGTTACAACTTACA+AGG	0.514711	7_4:-1367287	Msa1134740:three_prime_UTR
CCAACGCAACCGCCTCAGAC+TGG	0.515999	7_4:+1367803	None:intergenic
AGGATTGTGGTGTTGGCTCA+TGG	0.516288	7_4:-1367576	Msa1134740:CDS
GCATAAGACCTTGTTTGCAA+TGG	0.519342	7_4:-1368644	Msa1134740:CDS
GTTCGGGACCGGCGTTAACA+AGG	0.520425	7_4:+1368547	None:intergenic
CGGTTGAGGAGGTGATGAAC+CGG	0.528263	7_4:-1367855	Msa1134740:CDS
GAAGTAAACAACCAAATTTG+TGG	0.529591	7_4:+1369053	None:intergenic
AAAGAGTAGTAACGAGAACA+AGG	0.530460	7_4:-1367920	Msa1134740:CDS
ACTTCGGAAGCAGCTGCTAA+CGG	0.537457	7_4:-1368090	Msa1134740:CDS
TGTCATAGGCTTTGAGTGGT+GGG	0.543552	7_4:+1368061	None:intergenic
GGTTGTAGAGTACTAAGAAA+AGG	0.544678	7_4:-1368684	Msa1134740:CDS
GCTCATGGAATGTGGAGTTG+GGG	0.544869	7_4:-1367561	Msa1134740:CDS
AAAATATGGGAAAGAAAGAA+GGG	0.546091	7_4:+1368819	None:intergenic
TTCGGTTGAACCGGTTGAGG+AGG	0.552024	7_4:-1367866	Msa1134740:CDS
GGTCCCGAACATCTTCGTCC+AGG	0.558956	7_4:-1368534	Msa1134740:intron
AAGAAAACACTAACAAAATG+AGG	0.561350	7_4:-1367197	None:intergenic
TCAGTCGGTTTATTATGGTC+CGG	0.563725	7_4:-1368177	Msa1134740:CDS
TGGACGAAGATGTTCGGGAC+CGG	0.564250	7_4:+1368536	None:intergenic
ACCGATCACGCCGATAACTT+CGG	0.564329	7_4:-1368106	Msa1134740:CDS
TCTAGTACCTGAAAATCCAT+TGG	0.565036	7_4:-1368884	Msa1134740:five_prime_UTR
AACCCAATTTACGGTTCAGT+CGG	0.566554	7_4:-1368192	Msa1134740:CDS
AAAGAGAGAGAGAAAGCCAA+TGG	0.572825	7_4:+1368868	None:intergenic
AACCCCAACCTCCCTGAATG+TGG	0.572844	7_4:-1369026	Msa1134740:five_prime_UTR
GTTGACCGAACCAGTGAGAG+TGG	0.575650	7_4:-1367694	Msa1134740:CDS
GGAAGCAGCTGCTAACGGGA+GGG	0.580906	7_4:-1368085	Msa1134740:CDS
CTCAACAAAGAGTCAAGACT+CGG	0.582942	7_4:-1367990	Msa1134740:CDS
TGGTGTTGGCTCATGGAATG+TGG	0.583661	7_4:-1367569	Msa1134740:CDS
TCCGGTTCAACTGAGCCGAC+CGG	0.592967	7_4:-1367889	Msa1134740:CDS
AAACCGAACCAAGCCAAACC+CGG	0.593382	7_4:+1367519	None:intergenic
GGTTTCACGCGTTTATCACG+TGG	0.593523	7_4:-1367629	Msa1134740:CDS
TGACATCCGTCATGTGTCGA+AGG	0.595504	7_4:-1368043	Msa1134740:CDS
TTTCCTCCTTCGACACATGA+CGG	0.600098	7_4:+1368037	None:intergenic
TCAAGACTCGGTCGCGTAAG+CGG	0.609713	7_4:-1367978	Msa1134740:CDS
AGGGTTGTATTGAAGGATTG+TGG	0.614044	7_4:-1367589	Msa1134740:CDS
TGTGTCGAAGGAGGAAAACT+CGG	0.616290	7_4:-1368031	Msa1134740:CDS
AAAATGCGGATGAGTTGTAA+CGG	0.616520	7_4:-1368705	Msa1134740:CDS
GTCGATTAGCCACCAGTCTG+AGG	0.618436	7_4:-1367815	Msa1134740:CDS
GTAGAATTTGGCGAGAAACA+CGG	0.619114	7_4:+1368590	None:intergenic
CAAGCCGAAGATACAAGAAG+AGG	0.623975	7_4:-1367944	Msa1134740:CDS
GTTGGACCGGAAAATGAAGC+CGG	0.627386	7_4:-1367716	Msa1134740:CDS
CATCCGTCATGTGTCGAAGG+AGG	0.629554	7_4:-1368040	Msa1134740:CDS
CAAGTTGTTACAACTTACAA+GGG	0.635758	7_4:-1367286	Msa1134740:three_prime_UTR
ACCGGTTCAACCGAACCGGT+CGG	0.636400	7_4:+1367874	None:intergenic
ACGCAACCGCCTCAGACTGG+TGG	0.636669	7_4:+1367806	None:intergenic
ACGACTCATGACTAGCTGAC+CGG	0.638954	7_4:+1367836	None:intergenic
GCAGCTATGTCAAGCCGCAG+TGG	0.645652	7_4:-1368148	Msa1134740:CDS
TTGAGTTAACTCGGTCGACG+CGG	0.651446	7_4:+1368008	None:intergenic
CTCATGAACCTTGTTAACGC+CGG	0.654635	7_4:-1368555	Msa1134740:CDS
TCGTTGTTGTACGAAGCATG+TGG	0.660850	7_4:-1368225	Msa1134740:CDS
CCGAACCAGTGAGAGTGGAG+AGG	0.672740	7_4:-1367689	Msa1134740:CDS
GGTTCCTGTGAAGAAAAGAA+GGG	0.688577	7_4:-1367608	Msa1134740:CDS
GATTAGCCACCAGTCTGAGG+CGG	0.698548	7_4:-1367812	Msa1134740:CDS
CGGATGTCATAGGCTTTGAG+TGG	0.702654	7_4:+1368057	None:intergenic
AAGAGTAGTAACGAGAACAA+GGG	0.713391	7_4:-1367919	Msa1134740:CDS
GAATTTGGCGAGAAACACGG+TGG	0.783343	7_4:+1368593	None:intergenic
TTTCAAAACAGCTTCCACTG+CGG	0.791709	7_4:+1368134	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATCTTTTATTTTTTCAAT+TGG	-	chr7_4:1367514-1367533	Msa1134740:three_prime_UTR	10.0%
!!!	AATCTTTTATTTTTTCAATT+GGG	-	chr7_4:1367515-1367534	Msa1134740:three_prime_UTR	10.0%
!!!	AAATCTTTTATTTTTTCAAT+TGG	-	chr7_4:1367514-1367533	Msa1134740:three_prime_UTR	10.0%
!!!	AATCTTTTATTTTTTCAATT+GGG	-	chr7_4:1367515-1367534	Msa1134740:three_prime_UTR	10.0%
!!!	GAAAATTTTCATTAAAAATG+CGG	-	chr7_4:1367543-1367562	Msa1134740:CDS	15.0%
!!	AACAACAAAAAGTTATTAAA+AGG	+	chr7_4:1368860-1368879	None:intergenic	15.0%
!!!	GAAAATTTTCATTAAAAATG+CGG	-	chr7_4:1367543-1367562	Msa1134740:CDS	15.0%
!!	AACAACAAAAAGTTATTAAA+AGG	+	chr7_4:1368860-1368879	None:intergenic	15.0%
!!	ATTGTGTCTATGAAAAATAT+GGG	+	chr7_4:1367459-1367478	None:intergenic	20.0%
!!	GAAAAATTAGACTTTGATAT+AGG	+	chr7_4:1367488-1367507	None:intergenic	20.0%
!!!	ACAAATATATCAACTTTTGT+TGG	+	chr7_4:1367905-1367924	None:intergenic	20.0%
!!	ATTAAAAACTAAACAAGAAC+TGG	+	chr7_4:1368832-1368851	None:intergenic	20.0%
!!!	ACTTTTTGTTGTTTACATTT+TGG	-	chr7_4:1368867-1368886	Msa1134740:five_prime_UTR	20.0%
!!!	CTTTTTGTTGTTTACATTTT+GGG	-	chr7_4:1368868-1368887	Msa1134740:five_prime_UTR	20.0%
!!	ATTGTGTCTATGAAAAATAT+GGG	+	chr7_4:1367459-1367478	None:intergenic	20.0%
!!	GAAAAATTAGACTTTGATAT+AGG	+	chr7_4:1367488-1367507	None:intergenic	20.0%
!!!	ACAAATATATCAACTTTTGT+TGG	+	chr7_4:1367905-1367924	None:intergenic	20.0%
!!	ATTAAAAACTAAACAAGAAC+TGG	+	chr7_4:1368832-1368851	None:intergenic	20.0%
!!!	ACTTTTTGTTGTTTACATTT+TGG	-	chr7_4:1368867-1368886	Msa1134740:five_prime_UTR	20.0%
!!!	CTTTTTGTTGTTTACATTTT+GGG	-	chr7_4:1368868-1368887	Msa1134740:five_prime_UTR	20.0%
!	TTTATCTTGTTCCACAAATT+TGG	-	chr7_4:1367198-1367217	Msa1134740:three_prime_UTR	25.0%
!	TGTGTTTACTATAAAAACCA+TGG	+	chr7_4:1367267-1367286	None:intergenic	25.0%
!	GTATATGTGTTGTATTATTG+TGG	+	chr7_4:1367297-1367316	None:intergenic	25.0%
!	AAAATATGGGAAAGAAAGAA+GGG	+	chr7_4:1367446-1367465	None:intergenic	25.0%
!	AAAAATATGGGAAAGAAAGA+AGG	+	chr7_4:1367447-1367466	None:intergenic	25.0%
!	GATTGTGTCTATGAAAAATA+TGG	+	chr7_4:1367460-1367479	None:intergenic	25.0%
!	ATCTCTCTATAAGAAAAAGT+TGG	-	chr7_4:1367878-1367897	Msa1134740:CDS	25.0%
!	TTTATCTTGTTCCACAAATT+TGG	-	chr7_4:1367198-1367217	Msa1134740:three_prime_UTR	25.0%
!	TGTGTTTACTATAAAAACCA+TGG	+	chr7_4:1367267-1367286	None:intergenic	25.0%
!	GTATATGTGTTGTATTATTG+TGG	+	chr7_4:1367297-1367316	None:intergenic	25.0%
!	AAAATATGGGAAAGAAAGAA+GGG	+	chr7_4:1367446-1367465	None:intergenic	25.0%
!	AAAAATATGGGAAAGAAAGA+AGG	+	chr7_4:1367447-1367466	None:intergenic	25.0%
!	GATTGTGTCTATGAAAAATA+TGG	+	chr7_4:1367460-1367479	None:intergenic	25.0%
!	ATCTCTCTATAAGAAAAAGT+TGG	-	chr7_4:1367878-1367897	Msa1134740:CDS	25.0%
	GAAGTAAACAACCAAATTTG+TGG	+	chr7_4:1367212-1367231	None:intergenic	30.0%
!!!	ATTTTCAGGTACTAGATTGT+GGG	+	chr7_4:1367374-1367393	None:intergenic	30.0%
	TTAGTGCATGTTTAGATTGA+CGG	-	chr7_4:1367787-1367806	Msa1134740:CDS	30.0%
	GTATTGCATGTTTGGATAAA+CGG	+	chr7_4:1367854-1367873	None:intergenic	30.0%
!	TTTTCCTCTTCTTGTATCTT+CGG	+	chr7_4:1368325-1368344	None:intergenic	30.0%
!	GATCTTATTTAGAGATGAAC+CGG	-	chr7_4:1368522-1368541	Msa1134740:intron	30.0%
	ACTTTCTCATCTACATAGTT+TGG	+	chr7_4:1368935-1368954	None:intergenic	30.0%
!	TGTAGATGAGAAAGTACATT+CGG	-	chr7_4:1368940-1368959	Msa1134740:five_prime_UTR	30.0%
	TGTAAGTTGTAACAACTTGA+TGG	+	chr7_4:1368975-1368994	None:intergenic	30.0%
!	TCAAGTTGTTACAACTTACA+AGG	-	chr7_4:1368975-1368994	Msa1134740:five_prime_UTR	30.0%
	CAAGTTGTTACAACTTACAA+GGG	-	chr7_4:1368976-1368995	Msa1134740:five_prime_UTR	30.0%
	GAAGTAAACAACCAAATTTG+TGG	+	chr7_4:1367212-1367231	None:intergenic	30.0%
!!!	ATTTTCAGGTACTAGATTGT+GGG	+	chr7_4:1367374-1367393	None:intergenic	30.0%
	TTAGTGCATGTTTAGATTGA+CGG	-	chr7_4:1367787-1367806	Msa1134740:CDS	30.0%
	GTATTGCATGTTTGGATAAA+CGG	+	chr7_4:1367854-1367873	None:intergenic	30.0%
!	TTTTCCTCTTCTTGTATCTT+CGG	+	chr7_4:1368325-1368344	None:intergenic	30.0%
!	GATCTTATTTAGAGATGAAC+CGG	-	chr7_4:1368522-1368541	Msa1134740:intron	30.0%
	ACTTTCTCATCTACATAGTT+TGG	+	chr7_4:1368935-1368954	None:intergenic	30.0%
!	TGTAGATGAGAAAGTACATT+CGG	-	chr7_4:1368940-1368959	Msa1134740:five_prime_UTR	30.0%
	TGTAAGTTGTAACAACTTGA+TGG	+	chr7_4:1368975-1368994	None:intergenic	30.0%
!	TCAAGTTGTTACAACTTACA+AGG	-	chr7_4:1368975-1368994	Msa1134740:five_prime_UTR	30.0%
	CAAGTTGTTACAACTTACAA+GGG	-	chr7_4:1368976-1368995	Msa1134740:five_prime_UTR	30.0%
!!!	TTTTCAGGTACTAGATTGTG+GGG	+	chr7_4:1367373-1367392	None:intergenic	35.0%
!!!	GATTTTCAGGTACTAGATTG+TGG	+	chr7_4:1367375-1367394	None:intergenic	35.0%
	TCTAGTACCTGAAAATCCAT+TGG	-	chr7_4:1367378-1367397	Msa1134740:three_prime_UTR	35.0%
	AAAATGCGGATGAGTTGTAA+CGG	-	chr7_4:1367557-1367576	Msa1134740:CDS	35.0%
!	GGTTGTAGAGTACTAAGAAA+AGG	-	chr7_4:1367578-1367597	Msa1134740:CDS	35.0%
!	CTTTTGATCCATTGCAAACA+AGG	+	chr7_4:1367629-1367648	None:intergenic	35.0%
	AGATGTGTGTATTGCATGTT+TGG	+	chr7_4:1367862-1367881	None:intergenic	35.0%
	CGAATAGTGAACCCAATTTA+CGG	-	chr7_4:1368061-1368080	Msa1134740:CDS	35.0%
	GACTCTTTGTTGAGTTAACT+CGG	+	chr7_4:1368266-1368285	None:intergenic	35.0%
	AAAGAGTAGTAACGAGAACA+AGG	-	chr7_4:1368342-1368361	Msa1134740:intron	35.0%
	AAGAGTAGTAACGAGAACAA+GGG	-	chr7_4:1368343-1368362	Msa1134740:intron	35.0%
	GAAAAGAAGGGTTGTATTGA+AGG	-	chr7_4:1368666-1368685	Msa1134740:CDS	35.0%
!!!	TGGTTCAGTTTTGACTTAAG+CGG	-	chr7_4:1368766-1368785	Msa1134740:five_prime_UTR	35.0%
!	TGCATATGATGATGCATCAA+TGG	+	chr7_4:1369003-1369022	None:intergenic	35.0%
!!!	TTTTCAGGTACTAGATTGTG+GGG	+	chr7_4:1367373-1367392	None:intergenic	35.0%
!!!	GATTTTCAGGTACTAGATTG+TGG	+	chr7_4:1367375-1367394	None:intergenic	35.0%
	TCTAGTACCTGAAAATCCAT+TGG	-	chr7_4:1367378-1367397	Msa1134740:three_prime_UTR	35.0%
	AAAATGCGGATGAGTTGTAA+CGG	-	chr7_4:1367557-1367576	Msa1134740:CDS	35.0%
!	GGTTGTAGAGTACTAAGAAA+AGG	-	chr7_4:1367578-1367597	Msa1134740:CDS	35.0%
!	CTTTTGATCCATTGCAAACA+AGG	+	chr7_4:1367629-1367648	None:intergenic	35.0%
	AGATGTGTGTATTGCATGTT+TGG	+	chr7_4:1367862-1367881	None:intergenic	35.0%
	CGAATAGTGAACCCAATTTA+CGG	-	chr7_4:1368061-1368080	Msa1134740:CDS	35.0%
	GACTCTTTGTTGAGTTAACT+CGG	+	chr7_4:1368266-1368285	None:intergenic	35.0%
	AAAGAGTAGTAACGAGAACA+AGG	-	chr7_4:1368342-1368361	Msa1134740:intron	35.0%
	AAGAGTAGTAACGAGAACAA+GGG	-	chr7_4:1368343-1368362	Msa1134740:intron	35.0%
	GAAAAGAAGGGTTGTATTGA+AGG	-	chr7_4:1368666-1368685	Msa1134740:CDS	35.0%
!!!	TGGTTCAGTTTTGACTTAAG+CGG	-	chr7_4:1368766-1368785	Msa1134740:five_prime_UTR	35.0%
!	TGCATATGATGATGCATCAA+TGG	+	chr7_4:1369003-1369022	None:intergenic	35.0%
!	CCATGGTTTTTCCACATTCA+GGG	+	chr7_4:1367250-1367269	None:intergenic	40.0%
!	ACCATGGTTTTTCCACATTC+AGG	+	chr7_4:1367251-1367270	None:intergenic	40.0%
!!	GAGAAAGCCAATGGATTTTC+AGG	+	chr7_4:1367388-1367407	None:intergenic	40.0%
	AAAGAGAGAGAGAAAGCCAA+TGG	+	chr7_4:1367397-1367416	None:intergenic	40.0%
!	GCATAAGACCTTGTTTGCAA+TGG	-	chr7_4:1367618-1367637	Msa1134740:CDS	40.0%
!!	TGGCATTAGCTTGTGATTCA+GGG	+	chr7_4:1367652-1367671	None:intergenic	40.0%
	GTAGAATTTGGCGAGAAACA+CGG	+	chr7_4:1367675-1367694	None:intergenic	40.0%
	GTGTTTCTCGCCAAATTCTA+CGG	-	chr7_4:1367674-1367693	Msa1134740:CDS	40.0%
!!!	AGTGTCACTTTTTACGAACC+TGG	+	chr7_4:1367749-1367768	None:intergenic	40.0%
	AACCCAATTTACGGTTCAGT+CGG	-	chr7_4:1368070-1368089	Msa1134740:CDS	40.0%
	AACCGACTGAACCGTAAATT+GGG	+	chr7_4:1368075-1368094	None:intergenic	40.0%
	AAACCGACTGAACCGTAAAT+TGG	+	chr7_4:1368076-1368095	None:intergenic	40.0%
!	ACGGTTCAGTCGGTTTATTA+TGG	-	chr7_4:1368080-1368099	Msa1134740:CDS	40.0%
!	TCAGTCGGTTTATTATGGTC+CGG	-	chr7_4:1368085-1368104	Msa1134740:CDS	40.0%
	GTTTATTATGGTCCGGAAGT+TGG	-	chr7_4:1368092-1368111	Msa1134740:CDS	40.0%
	TTTCAAAACAGCTTCCACTG+CGG	+	chr7_4:1368131-1368150	None:intergenic	40.0%
	CTCAACAAAGAGTCAAGACT+CGG	-	chr7_4:1368272-1368291	Msa1134740:intron	40.0%
	GAGAACAAGGGATTTGAATC+CGG	-	chr7_4:1368355-1368374	Msa1134740:intron	40.0%
	ATTTAGAGATGAACCGGAGT+TGG	-	chr7_4:1368528-1368547	Msa1134740:intron	40.0%
	TGGTTCCTGTGAAGAAAAGA+AGG	-	chr7_4:1368653-1368672	Msa1134740:CDS	40.0%
	GGTTCCTGTGAAGAAAAGAA+GGG	-	chr7_4:1368654-1368673	Msa1134740:CDS	40.0%
!	ACAACCCTTCTTTTCTTCAC+AGG	+	chr7_4:1368661-1368680	None:intergenic	40.0%
	AGGGTTGTATTGAAGGATTG+TGG	-	chr7_4:1368673-1368692	Msa1134740:CDS	40.0%
	GTATTGAAGGATTGTGGTGT+TGG	-	chr7_4:1368679-1368698	Msa1134740:CDS	40.0%
!	CCATGGTTTTTCCACATTCA+GGG	+	chr7_4:1367250-1367269	None:intergenic	40.0%
!	ACCATGGTTTTTCCACATTC+AGG	+	chr7_4:1367251-1367270	None:intergenic	40.0%
!!	GAGAAAGCCAATGGATTTTC+AGG	+	chr7_4:1367388-1367407	None:intergenic	40.0%
	AAAGAGAGAGAGAAAGCCAA+TGG	+	chr7_4:1367397-1367416	None:intergenic	40.0%
!	GCATAAGACCTTGTTTGCAA+TGG	-	chr7_4:1367618-1367637	Msa1134740:CDS	40.0%
!!	TGGCATTAGCTTGTGATTCA+GGG	+	chr7_4:1367652-1367671	None:intergenic	40.0%
	GTAGAATTTGGCGAGAAACA+CGG	+	chr7_4:1367675-1367694	None:intergenic	40.0%
	GTGTTTCTCGCCAAATTCTA+CGG	-	chr7_4:1367674-1367693	Msa1134740:CDS	40.0%
!!!	AGTGTCACTTTTTACGAACC+TGG	+	chr7_4:1367749-1367768	None:intergenic	40.0%
	AACCCAATTTACGGTTCAGT+CGG	-	chr7_4:1368070-1368089	Msa1134740:CDS	40.0%
	AACCGACTGAACCGTAAATT+GGG	+	chr7_4:1368075-1368094	None:intergenic	40.0%
	AAACCGACTGAACCGTAAAT+TGG	+	chr7_4:1368076-1368095	None:intergenic	40.0%
!	ACGGTTCAGTCGGTTTATTA+TGG	-	chr7_4:1368080-1368099	Msa1134740:CDS	40.0%
!	TCAGTCGGTTTATTATGGTC+CGG	-	chr7_4:1368085-1368104	Msa1134740:CDS	40.0%
	GTTTATTATGGTCCGGAAGT+TGG	-	chr7_4:1368092-1368111	Msa1134740:CDS	40.0%
	TTTCAAAACAGCTTCCACTG+CGG	+	chr7_4:1368131-1368150	None:intergenic	40.0%
	CTCAACAAAGAGTCAAGACT+CGG	-	chr7_4:1368272-1368291	Msa1134740:intron	40.0%
	GAGAACAAGGGATTTGAATC+CGG	-	chr7_4:1368355-1368374	Msa1134740:intron	40.0%
	ATTTAGAGATGAACCGGAGT+TGG	-	chr7_4:1368528-1368547	Msa1134740:intron	40.0%
	TGGTTCCTGTGAAGAAAAGA+AGG	-	chr7_4:1368653-1368672	Msa1134740:CDS	40.0%
	GGTTCCTGTGAAGAAAAGAA+GGG	-	chr7_4:1368654-1368673	Msa1134740:CDS	40.0%
!	ACAACCCTTCTTTTCTTCAC+AGG	+	chr7_4:1368661-1368680	None:intergenic	40.0%
	AGGGTTGTATTGAAGGATTG+TGG	-	chr7_4:1368673-1368692	Msa1134740:CDS	40.0%
	GTATTGAAGGATTGTGGTGT+TGG	-	chr7_4:1368679-1368698	Msa1134740:CDS	40.0%
	TTTCCACATTCAGGGAGGTT+GGG	+	chr7_4:1367242-1367261	None:intergenic	45.0%
!	TTTTCCACATTCAGGGAGGT+TGG	+	chr7_4:1367243-1367262	None:intergenic	45.0%
!	TGGTTTTTCCACATTCAGGG+AGG	+	chr7_4:1367247-1367266	None:intergenic	45.0%
	CCCTGAATGTGGAAAAACCA+TGG	-	chr7_4:1367247-1367266	Msa1134740:three_prime_UTR	45.0%
!!	GTGGCATTAGCTTGTGATTC+AGG	+	chr7_4:1367653-1367672	None:intergenic	45.0%
	CTCATGAACCTTGTTAACGC+CGG	-	chr7_4:1367707-1367726	Msa1134740:CDS	45.0%
	TCGTTGTTGTACGAAGCATG+TGG	-	chr7_4:1368037-1368056	Msa1134740:CDS	45.0%
	TTGACATAGCTGCCAACTTC+CGG	+	chr7_4:1368107-1368126	None:intergenic	45.0%
!!	GCAGTGGAAGCTGTTTTGAA+AGG	-	chr7_4:1368130-1368149	Msa1134740:CDS	45.0%
!!	TGTCATAGGCTTTGAGTGGT+GGG	+	chr7_4:1368204-1368223	None:intergenic	45.0%
!!	ATGTCATAGGCTTTGAGTGG+TGG	+	chr7_4:1368205-1368224	None:intergenic	45.0%
	TTTCCTCCTTCGACACATGA+CGG	+	chr7_4:1368228-1368247	None:intergenic	45.0%
	TGTGTCGAAGGAGGAAAACT+CGG	-	chr7_4:1368231-1368250	Msa1134740:CDS	45.0%
	CTCTTCTTGTATCTTCGGCT+TGG	+	chr7_4:1368320-1368339	None:intergenic	45.0%
	CAAGCCGAAGATACAAGAAG+AGG	-	chr7_4:1368318-1368337	Msa1134740:intron	45.0%
!	TTCATTTTCCGGTCCAACTC+CGG	+	chr7_4:1368544-1368563	None:intergenic	45.0%
!	TGGAGAGGAAAAGGTTGGTT+TGG	-	chr7_4:1368588-1368607	Msa1134740:CDS	45.0%
!!	TTGGTTTGGAGCTGACTCTT+GGG	-	chr7_4:1368602-1368621	Msa1134740:CDS	45.0%
	ACGTGATAAACGCGTGAAAC+CGG	+	chr7_4:1368634-1368653	None:intergenic	45.0%
	CTTCAATATCCGGCTTAGAC+CGG	-	chr7_4:1368724-1368743	Msa1134740:exon	45.0%
	TTCAATATCCGGCTTAGACC+GGG	-	chr7_4:1368725-1368744	Msa1134740:five_prime_UTR	45.0%
	TTTCCACATTCAGGGAGGTT+GGG	+	chr7_4:1367242-1367261	None:intergenic	45.0%
!	TTTTCCACATTCAGGGAGGT+TGG	+	chr7_4:1367243-1367262	None:intergenic	45.0%
!	TGGTTTTTCCACATTCAGGG+AGG	+	chr7_4:1367247-1367266	None:intergenic	45.0%
	CCCTGAATGTGGAAAAACCA+TGG	-	chr7_4:1367247-1367266	Msa1134740:three_prime_UTR	45.0%
!!	GTGGCATTAGCTTGTGATTC+AGG	+	chr7_4:1367653-1367672	None:intergenic	45.0%
	CTCATGAACCTTGTTAACGC+CGG	-	chr7_4:1367707-1367726	Msa1134740:CDS	45.0%
	TCGTTGTTGTACGAAGCATG+TGG	-	chr7_4:1368037-1368056	Msa1134740:CDS	45.0%
	TTGACATAGCTGCCAACTTC+CGG	+	chr7_4:1368107-1368126	None:intergenic	45.0%
!!	GCAGTGGAAGCTGTTTTGAA+AGG	-	chr7_4:1368130-1368149	Msa1134740:CDS	45.0%
!!	TGTCATAGGCTTTGAGTGGT+GGG	+	chr7_4:1368204-1368223	None:intergenic	45.0%
!!	ATGTCATAGGCTTTGAGTGG+TGG	+	chr7_4:1368205-1368224	None:intergenic	45.0%
	TTTCCTCCTTCGACACATGA+CGG	+	chr7_4:1368228-1368247	None:intergenic	45.0%
	TGTGTCGAAGGAGGAAAACT+CGG	-	chr7_4:1368231-1368250	Msa1134740:CDS	45.0%
	CTCTTCTTGTATCTTCGGCT+TGG	+	chr7_4:1368320-1368339	None:intergenic	45.0%
	CAAGCCGAAGATACAAGAAG+AGG	-	chr7_4:1368318-1368337	Msa1134740:intron	45.0%
!	TTCATTTTCCGGTCCAACTC+CGG	+	chr7_4:1368544-1368563	None:intergenic	45.0%
!	TGGAGAGGAAAAGGTTGGTT+TGG	-	chr7_4:1368588-1368607	Msa1134740:CDS	45.0%
!!	TTGGTTTGGAGCTGACTCTT+GGG	-	chr7_4:1368602-1368621	Msa1134740:CDS	45.0%
	ACGTGATAAACGCGTGAAAC+CGG	+	chr7_4:1368634-1368653	None:intergenic	45.0%
	CTTCAATATCCGGCTTAGAC+CGG	-	chr7_4:1368724-1368743	Msa1134740:exon	45.0%
	TTCAATATCCGGCTTAGACC+GGG	-	chr7_4:1368725-1368744	Msa1134740:five_prime_UTR	45.0%
	TTCCACATTCAGGGAGGTTG+GGG	+	chr7_4:1367241-1367260	None:intergenic	50.0%
	GAATTTGGCGAGAAACACGG+TGG	+	chr7_4:1367672-1367691	None:intergenic	50.0%
	ACCAGCACGACCGTAGAATT+TGG	+	chr7_4:1367687-1367706	None:intergenic	50.0%
	GAACCTGGACGAAGATGTTC+GGG	+	chr7_4:1367734-1367753	None:intergenic	50.0%
	CGAACCTGGACGAAGATGTT+CGG	+	chr7_4:1367735-1367754	None:intergenic	50.0%
	ACCGATCACGCCGATAACTT+CGG	-	chr7_4:1368156-1368175	Msa1134740:CDS	50.0%
	TCCGAAGTTATCGGCGTGAT+CGG	+	chr7_4:1368160-1368179	None:intergenic	50.0%
	GCAGCTGCTTCCGAAGTTAT+CGG	+	chr7_4:1368169-1368188	None:intergenic	50.0%
	ACTTCGGAAGCAGCTGCTAA+CGG	-	chr7_4:1368172-1368191	Msa1134740:CDS	50.0%
!!	CGGATGTCATAGGCTTTGAG+TGG	+	chr7_4:1368208-1368227	None:intergenic	50.0%
!!	CGACACATGACGGATGTCAT+AGG	+	chr7_4:1368218-1368237	None:intergenic	50.0%
	TGACATCCGTCATGTGTCGA+AGG	-	chr7_4:1368219-1368238	Msa1134740:CDS	50.0%
	TTGAGTTAACTCGGTCGACG+CGG	+	chr7_4:1368257-1368276	None:intergenic	50.0%
!	ACGACTCATGACTAGCTGAC+CGG	+	chr7_4:1368429-1368448	None:intergenic	50.0%
	GTTGGACCGGAAAATGAAGC+CGG	-	chr7_4:1368546-1368565	Msa1134740:CDS	50.0%
!!	GGTCAACCGGCTTCATTTTC+CGG	+	chr7_4:1368555-1368574	None:intergenic	50.0%
!	CTTTTCCTCTCCACTCTCAC+TGG	+	chr7_4:1368581-1368600	None:intergenic	50.0%
	CAGTGAGAGTGGAGAGGAAA+AGG	-	chr7_4:1368579-1368598	Msa1134740:CDS	50.0%
	GAGAGTGGAGAGGAAAAGGT+TGG	-	chr7_4:1368583-1368602	Msa1134740:CDS	50.0%
!!	GTTGGTTTGGAGCTGACTCT+TGG	-	chr7_4:1368601-1368620	Msa1134740:CDS	50.0%
	GGTTTCACGCGTTTATCACG+TGG	-	chr7_4:1368633-1368652	Msa1134740:CDS	50.0%
!!	AGGATTGTGGTGTTGGCTCA+TGG	-	chr7_4:1368686-1368705	Msa1134740:CDS	50.0%
!!	TGGTGTTGGCTCATGGAATG+TGG	-	chr7_4:1368693-1368712	Msa1134740:CDS	50.0%
	TGGCTCATGGAATGTGGAGT+TGG	-	chr7_4:1368699-1368718	Msa1134740:CDS	50.0%
	GGCTCATGGAATGTGGAGTT+GGG	-	chr7_4:1368700-1368719	Msa1134740:CDS	50.0%
	GCTCATGGAATGTGGAGTTG+GGG	-	chr7_4:1368701-1368720	Msa1134740:CDS	50.0%
	GGAGTTGGGGCTTCAATATC+CGG	-	chr7_4:1368714-1368733	Msa1134740:exon	50.0%
	AAACCGAACCAAGCCAAACC+CGG	+	chr7_4:1368746-1368765	None:intergenic	50.0%
!!!	GGTTTGGCTTGGTTCGGTTT+TGG	-	chr7_4:1368746-1368765	Msa1134740:five_prime_UTR	50.0%
	TTCCACATTCAGGGAGGTTG+GGG	+	chr7_4:1367241-1367260	None:intergenic	50.0%
	GAATTTGGCGAGAAACACGG+TGG	+	chr7_4:1367672-1367691	None:intergenic	50.0%
	ACCAGCACGACCGTAGAATT+TGG	+	chr7_4:1367687-1367706	None:intergenic	50.0%
	GAACCTGGACGAAGATGTTC+GGG	+	chr7_4:1367734-1367753	None:intergenic	50.0%
	CGAACCTGGACGAAGATGTT+CGG	+	chr7_4:1367735-1367754	None:intergenic	50.0%
	ACCGATCACGCCGATAACTT+CGG	-	chr7_4:1368156-1368175	Msa1134740:CDS	50.0%
	TCCGAAGTTATCGGCGTGAT+CGG	+	chr7_4:1368160-1368179	None:intergenic	50.0%
	GCAGCTGCTTCCGAAGTTAT+CGG	+	chr7_4:1368169-1368188	None:intergenic	50.0%
	ACTTCGGAAGCAGCTGCTAA+CGG	-	chr7_4:1368172-1368191	Msa1134740:CDS	50.0%
!!	CGGATGTCATAGGCTTTGAG+TGG	+	chr7_4:1368208-1368227	None:intergenic	50.0%
!!	CGACACATGACGGATGTCAT+AGG	+	chr7_4:1368218-1368237	None:intergenic	50.0%
	TGACATCCGTCATGTGTCGA+AGG	-	chr7_4:1368219-1368238	Msa1134740:CDS	50.0%
	TTGAGTTAACTCGGTCGACG+CGG	+	chr7_4:1368257-1368276	None:intergenic	50.0%
!	ACGACTCATGACTAGCTGAC+CGG	+	chr7_4:1368429-1368448	None:intergenic	50.0%
	GTTGGACCGGAAAATGAAGC+CGG	-	chr7_4:1368546-1368565	Msa1134740:CDS	50.0%
!!	GGTCAACCGGCTTCATTTTC+CGG	+	chr7_4:1368555-1368574	None:intergenic	50.0%
!	CTTTTCCTCTCCACTCTCAC+TGG	+	chr7_4:1368581-1368600	None:intergenic	50.0%
	CAGTGAGAGTGGAGAGGAAA+AGG	-	chr7_4:1368579-1368598	Msa1134740:CDS	50.0%
	GAGAGTGGAGAGGAAAAGGT+TGG	-	chr7_4:1368583-1368602	Msa1134740:CDS	50.0%
!!	GTTGGTTTGGAGCTGACTCT+TGG	-	chr7_4:1368601-1368620	Msa1134740:CDS	50.0%
	GGTTTCACGCGTTTATCACG+TGG	-	chr7_4:1368633-1368652	Msa1134740:CDS	50.0%
!!	AGGATTGTGGTGTTGGCTCA+TGG	-	chr7_4:1368686-1368705	Msa1134740:CDS	50.0%
!!	TGGTGTTGGCTCATGGAATG+TGG	-	chr7_4:1368693-1368712	Msa1134740:CDS	50.0%
	TGGCTCATGGAATGTGGAGT+TGG	-	chr7_4:1368699-1368718	Msa1134740:CDS	50.0%
	GGCTCATGGAATGTGGAGTT+GGG	-	chr7_4:1368700-1368719	Msa1134740:CDS	50.0%
	GCTCATGGAATGTGGAGTTG+GGG	-	chr7_4:1368701-1368720	Msa1134740:CDS	50.0%
	GGAGTTGGGGCTTCAATATC+CGG	-	chr7_4:1368714-1368733	Msa1134740:exon	50.0%
	AAACCGAACCAAGCCAAACC+CGG	+	chr7_4:1368746-1368765	None:intergenic	50.0%
!!!	GGTTTGGCTTGGTTCGGTTT+TGG	-	chr7_4:1368746-1368765	Msa1134740:five_prime_UTR	50.0%
	AACCCCAACCTCCCTGAATG+TGG	-	chr7_4:1367236-1367255	Msa1134740:three_prime_UTR	55.0%
	GCCAAATTCTACGGTCGTGC+TGG	-	chr7_4:1367683-1367702	Msa1134740:CDS	55.0%
	TGGACGAAGATGTTCGGGAC+CGG	+	chr7_4:1367729-1367748	None:intergenic	55.0%
	CTTCGGAAGCAGCTGCTAAC+GGG	-	chr7_4:1368173-1368192	Msa1134740:CDS	55.0%
	CATCCGTCATGTGTCGAAGG+AGG	-	chr7_4:1368222-1368241	Msa1134740:CDS	55.0%
!	TCAAGACTCGGTCGCGTAAG+CGG	-	chr7_4:1368284-1368303	Msa1134740:intron	55.0%
	TTCAACTGAGCCGACCGGTT+CGG	-	chr7_4:1368378-1368397	Msa1134740:intron	55.0%
!	CTCAACCGGTTCAACCGAAC+CGG	+	chr7_4:1368395-1368414	None:intergenic	55.0%
	TTCGGTTGAACCGGTTGAGG+AGG	-	chr7_4:1368396-1368415	Msa1134740:intron	55.0%
	CGGTTCATCACCTCCTCAAC+CGG	+	chr7_4:1368409-1368428	None:intergenic	55.0%
	CGGTTGAGGAGGTGATGAAC+CGG	-	chr7_4:1368407-1368426	Msa1134740:intron	55.0%
!	GTCGATTAGCCACCAGTCTG+AGG	-	chr7_4:1368447-1368466	Msa1134740:intron	55.0%
!	GATTAGCCACCAGTCTGAGG+CGG	-	chr7_4:1368450-1368469	Msa1134740:intron	55.0%
	GAGATGAACCGGAGTTGGAC+CGG	-	chr7_4:1368533-1368552	Msa1134740:intron	55.0%
!!	CTCTCACTGGTTCGGTCAAC+CGG	+	chr7_4:1368568-1368587	None:intergenic	55.0%
	GTTGACCGAACCAGTGAGAG+TGG	-	chr7_4:1368568-1368587	Msa1134740:CDS	55.0%
!	CCTCTCCACTCTCACTGGTT+CGG	+	chr7_4:1368576-1368595	None:intergenic	55.0%
!	GCTGACTCTTGGGCTTGAAC+CGG	-	chr7_4:1368612-1368631	Msa1134740:CDS	55.0%
	TATCCGGCTTAGACCGGGTT+TGG	-	chr7_4:1368730-1368749	Msa1134740:five_prime_UTR	55.0%
	AAGCCAAACCCGGTCTAAGC+CGG	+	chr7_4:1368736-1368755	None:intergenic	55.0%
!!	AGACCGGGTTTGGCTTGGTT+CGG	-	chr7_4:1368740-1368759	Msa1134740:five_prime_UTR	55.0%
	AACCCCAACCTCCCTGAATG+TGG	-	chr7_4:1367236-1367255	Msa1134740:three_prime_UTR	55.0%
	GCCAAATTCTACGGTCGTGC+TGG	-	chr7_4:1367683-1367702	Msa1134740:CDS	55.0%
	TGGACGAAGATGTTCGGGAC+CGG	+	chr7_4:1367729-1367748	None:intergenic	55.0%
	CTTCGGAAGCAGCTGCTAAC+GGG	-	chr7_4:1368173-1368192	Msa1134740:CDS	55.0%
	CATCCGTCATGTGTCGAAGG+AGG	-	chr7_4:1368222-1368241	Msa1134740:CDS	55.0%
!	TCAAGACTCGGTCGCGTAAG+CGG	-	chr7_4:1368284-1368303	Msa1134740:intron	55.0%
	TTCAACTGAGCCGACCGGTT+CGG	-	chr7_4:1368378-1368397	Msa1134740:intron	55.0%
!	CTCAACCGGTTCAACCGAAC+CGG	+	chr7_4:1368395-1368414	None:intergenic	55.0%
	TTCGGTTGAACCGGTTGAGG+AGG	-	chr7_4:1368396-1368415	Msa1134740:intron	55.0%
	CGGTTCATCACCTCCTCAAC+CGG	+	chr7_4:1368409-1368428	None:intergenic	55.0%
	CGGTTGAGGAGGTGATGAAC+CGG	-	chr7_4:1368407-1368426	Msa1134740:intron	55.0%
!	GTCGATTAGCCACCAGTCTG+AGG	-	chr7_4:1368447-1368466	Msa1134740:intron	55.0%
!	GATTAGCCACCAGTCTGAGG+CGG	-	chr7_4:1368450-1368469	Msa1134740:intron	55.0%
	GAGATGAACCGGAGTTGGAC+CGG	-	chr7_4:1368533-1368552	Msa1134740:intron	55.0%
!!	CTCTCACTGGTTCGGTCAAC+CGG	+	chr7_4:1368568-1368587	None:intergenic	55.0%
	GTTGACCGAACCAGTGAGAG+TGG	-	chr7_4:1368568-1368587	Msa1134740:CDS	55.0%
!	CCTCTCCACTCTCACTGGTT+CGG	+	chr7_4:1368576-1368595	None:intergenic	55.0%
!	GCTGACTCTTGGGCTTGAAC+CGG	-	chr7_4:1368612-1368631	Msa1134740:CDS	55.0%
	TATCCGGCTTAGACCGGGTT+TGG	-	chr7_4:1368730-1368749	Msa1134740:five_prime_UTR	55.0%
	AAGCCAAACCCGGTCTAAGC+CGG	+	chr7_4:1368736-1368755	None:intergenic	55.0%
!!	AGACCGGGTTTGGCTTGGTT+CGG	-	chr7_4:1368740-1368759	Msa1134740:five_prime_UTR	55.0%
	GTTCGGGACCGGCGTTAACA+AGG	+	chr7_4:1367718-1367737	None:intergenic	60.0%
	GGTCCCGAACATCTTCGTCC+AGG	-	chr7_4:1367728-1367747	Msa1134740:CDS	60.0%
	GCAGCTATGTCAAGCCGCAG+TGG	-	chr7_4:1368114-1368133	Msa1134740:CDS	60.0%
	GGAAGCAGCTGCTAACGGGA+GGG	-	chr7_4:1368177-1368196	Msa1134740:CDS	60.0%
	GAAGCAGCTGCTAACGGGAG+GGG	-	chr7_4:1368178-1368197	Msa1134740:CDS	60.0%
	TCCGGTTCAACTGAGCCGAC+CGG	-	chr7_4:1368373-1368392	Msa1134740:intron	60.0%
!	ACCGGTCGGCTCAGTTGAAC+CGG	+	chr7_4:1368377-1368396	None:intergenic	60.0%
!	ACCGGTTCAACCGAACCGGT+CGG	+	chr7_4:1368391-1368410	None:intergenic	60.0%
!!	CGGTTCGGTTGAACCGGTTG+AGG	-	chr7_4:1368393-1368412	Msa1134740:intron	60.0%
	CCGAACCAGTGAGAGTGGAG+AGG	-	chr7_4:1368573-1368592	Msa1134740:CDS	60.0%
	GGCTTAGACCGGGTTTGGCT+TGG	-	chr7_4:1368735-1368754	Msa1134740:five_prime_UTR	60.0%
	GTTCGGGACCGGCGTTAACA+AGG	+	chr7_4:1367718-1367737	None:intergenic	60.0%
	GGTCCCGAACATCTTCGTCC+AGG	-	chr7_4:1367728-1367747	Msa1134740:CDS	60.0%
	GCAGCTATGTCAAGCCGCAG+TGG	-	chr7_4:1368114-1368133	Msa1134740:CDS	60.0%
	GGAAGCAGCTGCTAACGGGA+GGG	-	chr7_4:1368177-1368196	Msa1134740:CDS	60.0%
	GAAGCAGCTGCTAACGGGAG+GGG	-	chr7_4:1368178-1368197	Msa1134740:CDS	60.0%
	TCCGGTTCAACTGAGCCGAC+CGG	-	chr7_4:1368373-1368392	Msa1134740:intron	60.0%
!	ACCGGTCGGCTCAGTTGAAC+CGG	+	chr7_4:1368377-1368396	None:intergenic	60.0%
!	ACCGGTTCAACCGAACCGGT+CGG	+	chr7_4:1368391-1368410	None:intergenic	60.0%
!!	CGGTTCGGTTGAACCGGTTG+AGG	-	chr7_4:1368393-1368412	Msa1134740:intron	60.0%
	CCGAACCAGTGAGAGTGGAG+AGG	-	chr7_4:1368573-1368592	Msa1134740:CDS	60.0%
	GGCTTAGACCGGGTTTGGCT+TGG	-	chr7_4:1368735-1368754	Msa1134740:five_prime_UTR	60.0%
	CGGAAGCAGCTGCTAACGGG+AGG	-	chr7_4:1368176-1368195	Msa1134740:CDS	65.0%
!!	GCCGACCGGTTCGGTTGAAC+CGG	-	chr7_4:1368387-1368406	Msa1134740:intron	65.0%
	ACGCAACCGCCTCAGACTGG+TGG	+	chr7_4:1368459-1368478	None:intergenic	65.0%
	CCAACGCAACCGCCTCAGAC+TGG	+	chr7_4:1368462-1368481	None:intergenic	65.0%
!	CCAGTCTGAGGCGGTTGCGT+TGG	-	chr7_4:1368459-1368478	Msa1134740:intron	65.0%
!	GTCTGAGGCGGTTGCGTTGG+TGG	-	chr7_4:1368462-1368481	Msa1134740:intron	65.0%
!	GAGGCGGTTGCGTTGGTGGA+TGG	-	chr7_4:1368466-1368485	Msa1134740:intron	65.0%
	CGGAAGCAGCTGCTAACGGG+AGG	-	chr7_4:1368176-1368195	Msa1134740:CDS	65.0%
!!	GCCGACCGGTTCGGTTGAAC+CGG	-	chr7_4:1368387-1368406	Msa1134740:intron	65.0%
	ACGCAACCGCCTCAGACTGG+TGG	+	chr7_4:1368459-1368478	None:intergenic	65.0%
	CCAACGCAACCGCCTCAGAC+TGG	+	chr7_4:1368462-1368481	None:intergenic	65.0%
!	CCAGTCTGAGGCGGTTGCGT+TGG	-	chr7_4:1368459-1368478	Msa1134740:intron	65.0%
!	GTCTGAGGCGGTTGCGTTGG+TGG	-	chr7_4:1368462-1368481	Msa1134740:intron	65.0%
!	GAGGCGGTTGCGTTGGTGGA+TGG	-	chr7_4:1368466-1368485	Msa1134740:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_4	gene	1367198	1369086	1367198	ID=Msa1134740;Name=Msa1134740
chr7_4	mRNA	1367198	1369086	1367198	ID=Msa1134740-mRNA-1;Parent=Msa1134740;Name=Msa1134740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=362\|1\|1\|1\|1\|1\|2\|345\|301
chr7_4	exon	1367198	1368258	1367198	ID=Msa1134740-mRNA-1:exon:516;Parent=Msa1134740-mRNA-1
chr7_4	exon	1368535	1369086	1368535	ID=Msa1134740-mRNA-1:exon:515;Parent=Msa1134740-mRNA-1
chr7_4	five_prime_UTR	1368725	1369086	1368725	ID=Msa1134740-mRNA-1:five_prime_utr;Parent=Msa1134740-mRNA-1
chr7_4	CDS	1368535	1368724	1368535	ID=Msa1134740-mRNA-1:cds;Parent=Msa1134740-mRNA-1
chr7_4	CDS	1367543	1368258	1367543	ID=Msa1134740-mRNA-1:cds;Parent=Msa1134740-mRNA-1
chr7_4	three_prime_UTR	1367198	1367542	1367198	ID=Msa1134740-mRNA-1:three_prime_utr;Parent=Msa1134740-mRNA-1

Gene Sequence

>Msa1134740

ATGCGGATGAGTTGTAACGGTTGTAGAGTACTAAGAAAAGGTTGCAGTGAAAACTGTAGCATAAGACCTTGTTTGCAATGGATCAAAAGCCCTGAATCACAAGCTAATGCCACCGTGTTTCTCGCCAAATTCTACGGTCGTGCTGGTCTCATGAACCTTGTTAACGCCGGTCCCGAACATCTTCGTCCAGCAATTTTTCGTTCGTTGTTGTACGAAGCATGTGGTCGAATAGTGAACCCAATTTACGGTTCAGTCGGTTTATTATGGTCCGGAAGTTGGCAGCTATGTCAAGCCGCAGTGGAAGCTGTTTTGAAAGGCGCACCGATCACGCCGATAACTTCGGAAGCAGCTGCTAACGGGAGGGGCCCACCACTCAAAGCCTATGACATCCGTCATGTGTCGAAGGAGGAAAACTCGGCCGCGTCGACCGAGTTAACTCAACAAAGAGTCAAGACTCGGTCGCGTAAGCGGTCGAGTTTAGCCAAGCCGAAGATACAAGAAGAGGAAAAGAGTAGTAACGAGAACAAGGGATTTGAATCCGGTTCAACTGAGCCGACCGGTTCGGTTGAACCGGTTGAGGAGGTGATGAACCGGTCAGCTAGTCATGAGTCGTCGATTAGCCACCAGTCTGAGGCGGTTGCGTTGGTGGATGGAGAGAGTAAAGATAGTGAGAGTGAAACTTCGATGATCTTATTTAGAGATGAACCGGAGTTGGACCGGAAAATGAAGCCGGTTGACCGAACCAGTGAGAGTGGAGAGGAAAAGGTTGGTTTGGAGCTGACTCTTGGGCTTGAACCGGTTTCACGCGTTTATCACGTGGTTCCTGTGAAGAAAAGAAGGGTTGTATTGAAGGATTGTGGTGTTGGCTCATGGAATGTGGAGTTGGGGCTTCAATATCCGGCTTAG

Protein sequence

>Msa1134740

MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKEENSAASTELTQQRVKTRSRKRSSLAKPKIQEEEKSSNENKGFESGSTEPTGSVEPVEEVMNRSASHESSISHQSEAVALVDGESKDSESETSMILFRDEPELDRKMKPVDRTSESGEEKVGLELTLGLEPVSRVYHVVPVKKRRVVLKDCGVGSWNVELGLQYPA*