AlfalfaGEDB | Msa1342560

M. sativa cultivar zhongmu-4 / Msa1342560

KEGG: -
GO: GO:0001101 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009739 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03195.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342560	XP_013447443.1	97.010	301	9	0	1	301	1	301	0.0	597

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342560	sp\|Q9M886\|LBD41_ARATH	60.351	285	69	4	1	281	1	245	2.20e-112	328

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342560	A0A072TVI9	97.010	301	9	0	1	301	1	301	0.0	597

TFs/TRs:

Gene ID	Type	Classification
Msa1342560	TF	LOB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0034100	Msa1342560	-0.819554	1.092798e-52	-8.615850e-47
Msa0043840	Msa1342560	0.808738	2.672767e-50	-8.615850e-47
Msa0090500	Msa1342560	0.804263	2.349345e-49	-8.615850e-47
Msa0128110	Msa1342560	-0.812266	4.622039e-51	-8.615850e-47
Msa0220170	Msa1342560	0.800959	1.128062e-48	-8.615850e-47
Msa0227790	Msa1342560	0.825602	4.287354e-54	-8.615850e-47
Msa1342560	Msa1379940	0.821144	4.718616e-53	-8.615850e-47
Msa1342560	Msa1429810	0.814622	1.402509e-51	-8.615850e-47
Msa0372100	Msa1342560	0.803344	3.646578e-49	-8.615850e-47
Msa0380590	Msa1342560	0.807163	5.781909e-50	-8.615850e-47
Msa0384590	Msa1342560	0.826478	2.653303e-54	-8.615850e-47
Msa0419420	Msa1342560	-0.807838	4.156578e-50	-8.615850e-47
Msa0434660	Msa1342560	0.820713	5.930146e-53	-8.615850e-47
Msa0436440	Msa1342560	0.800627	1.318574e-48	-8.615850e-47
Msa1047320	Msa1342560	0.832419	9.555874e-56	-8.615850e-47
Msa1061780	Msa1342560	0.803261	3.793804e-49	-8.615850e-47
Msa1070630	Msa1342560	-0.802950	4.397859e-49	-8.615850e-47
Msa1088740	Msa1342560	-0.826159	3.161133e-54	-8.615850e-47
Msa0261490	Msa1342560	0.833567	4.953256e-56	-8.615850e-47
Msa0267710	Msa1342560	0.808006	3.827514e-50	-8.615850e-47
Msa1107330	Msa1342560	0.814822	1.266755e-51	-8.615850e-47
Msa1134740	Msa1342560	0.941445	4.109794e-101	-8.615850e-47
Msa1134770	Msa1342560	0.863414	2.533110e-64	-8.615850e-47
Msa1150860	Msa1342560	0.809262	2.064210e-50	-8.615850e-47
Msa1158450	Msa1342560	-0.802382	5.760282e-49	-8.615850e-47
Msa1190350	Msa1342560	-0.825913	3.615916e-54	-8.615850e-47
Msa0500420	Msa1342560	0.808442	3.090652e-50	-8.615850e-47
Msa0522540	Msa1342560	0.822385	2.437270e-53	-8.615850e-47
Msa0526150	Msa1342560	0.823218	1.559119e-53	-8.615850e-47
Msa0541940	Msa1342560	0.802739	4.862292e-49	-8.615850e-47
Msa0572360	Msa1342560	0.831637	1.491101e-55	-8.615850e-47
Msa0871620	Msa1342560	0.827714	1.343114e-54	-8.615850e-47
Msa0876230	Msa1342560	0.807096	5.973817e-50	-8.615850e-47
Msa0921860	Msa1342560	0.800104	1.685362e-48	-8.615850e-47
Msa0931370	Msa1342560	0.811458	6.932611e-51	-8.615850e-47
Msa0936950	Msa1342560	0.810365	1.195346e-50	-8.615850e-47
Msa0970100	Msa1342560	0.805560	1.258272e-49	-8.615850e-47
Msa0978530	Msa1342560	0.806338	8.633953e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342560	MtrunA17_Chr7g0215281	97.010	301	9	0	1	301	1	301	0.0	597
Msa1342560	MtrunA17_Chr6g0457431	80.625	160	26	2	1	160	1	155	2.15e-91	268
Msa1342560	MtrunA17_Chr6g0469271	44.395	223	114	4	1	213	1	223	7.68e-58	185
Msa1342560	MtrunA17_Chr4g0053911	50.888	169	67	2	3	159	1	165	1.45e-54	177
Msa1342560	MtrunA17_Chr6g0470651	51.149	174	68	6	1	164	1	167	1.10e-52	172
Msa1342560	MtrunA17_Chr5g0401401	64.545	110	39	0	3	112	1	110	4.76e-52	171
Msa1342560	MtrunA17_Chr6g0470631	50.575	174	69	6	1	164	1	167	1.44e-51	169
Msa1342560	MtrunA17_Chr1g0209841	42.029	207	98	5	1	196	1	196	5.22e-45	152
Msa1342560	MtrunA17_Chr1g0207471	60.577	104	41	0	3	106	1	104	5.99e-45	151

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342560	AT3G02550.1	60.351	285	69	4	1	281	1	245	2.24e-113	328
Msa1342560	AT1G67100.1	82.270	141	22	2	1	138	1	141	1.02e-82	249
Msa1342560	AT1G68510.1	62.941	170	53	2	1	160	1	170	3.35e-74	228
Msa1342560	AT3G49940.1	70.000	110	33	0	3	112	1	110	3.02e-55	179
Msa1342560	AT5G67420.2	65.455	110	38	0	3	112	1	110	4.10e-54	177
Msa1342560	AT5G67420.1	65.455	110	38	0	3	112	1	110	4.10e-54	177
Msa1342560	AT4G37540.1	66.667	111	37	0	3	113	1	111	3.53e-53	174

Find 117 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAACCGACTGAACCGTAAAT+TGG	0.188374	tig0005911:+2879	None:intergenic
TTTATCTTGTTCCACAAATT+TGG	0.197567	tig0005911:-3742	Msa1342560:five_prime_UTR
GTGGCATTAGCTTGTGATTC+AGG	0.204656	tig0005911:+3302	None:intergenic
TTTCCACATTCAGGGAGGTT+GGG	0.280644	tig0005911:+3701	None:intergenic
GGCTCATGGAATGTGGAGTT+GGG	0.290152	tig0005911:-2252	Msa1342560:CDS
GGTTTGGCTTGGTTCGGTTT+TGG	0.303637	tig0005911:-2206	Msa1342560:three_prime_UTR
ACTTTCTCATCTACATAGTT+TGG	0.307581	tig0005911:+2010	None:intergenic
ACCAGCACGACCGTAGAATT+TGG	0.324902	tig0005911:+3268	None:intergenic
TGGAGAGGAAAAGGTTGGTT+TGG	0.330903	tig0005911:-2364	Msa1342560:CDS
GAACCTGGGCGAAGATGTTC+GGG	0.335828	tig0005911:+3221	None:intergenic
TGTAAGTTGTAACAACTTGA+TGG	0.341415	tig0005911:+1970	None:intergenic
TATCCGGCTTAGACCGGGTT+TGG	0.359852	tig0005911:-2222	Msa1342560:exon
GTTGGTTTGGAGCTGACTCT+TGG	0.364251	tig0005911:-2351	Msa1342560:CDS
CGAATAGTGAACCCAATTTA+CGG	0.368957	tig0005911:-2891	Msa1342560:CDS
CGAACCTGGGCGAAGATGTT+CGG	0.373009	tig0005911:+3220	None:intergenic
CTCTCACTGGTTCGGTCAAC+CGG	0.379598	tig0005911:+2387	None:intergenic
GCAGCTGCTTCCGAAGTTAT+CGG	0.380995	tig0005911:+2786	None:intergenic
CTCTTCTTGTATCTTCGGCT+TGG	0.390746	tig0005911:+2635	None:intergenic
CCTCTCCACTCTCACTGGTT+CGG	0.397640	tig0005911:+2379	None:intergenic
GGAGTTGGGGCTTCAATATC+CGG	0.399627	tig0005911:-2238	Msa1342560:CDS
GAAAAGAAGGGTTGTATTGA+AGG	0.400262	tig0005911:-2286	Msa1342560:CDS
ACGTGATAAACGCGTGAAAC+CGG	0.400688	tig0005911:+2321	None:intergenic
TGGCTCATGGAATGTGGAGT+TGG	0.402516	tig0005911:-2253	Msa1342560:CDS
TTCCACATTCAGGGAGGTTG+GGG	0.403370	tig0005911:+3702	None:intergenic
TTGGTTTGGAGCTGACTCTT+GGG	0.409856	tig0005911:-2350	Msa1342560:CDS
GATCTTATTTAGAGATGAAC+CGG	0.409879	tig0005911:-2430	Msa1342560:CDS
TGACACATGACGGATGTCAT+AGG	0.412076	tig0005911:+2737	None:intergenic
CAGTGAGAGTGGAGAGGAAA+AGG	0.413870	tig0005911:-2373	Msa1342560:CDS
GGCTTAGACCGGGTTTGGCT+TGG	0.414881	tig0005911:-2217	Msa1342560:exon
GTCTGAGGCGGTTGCGTTGG+TGG	0.415235	tig0005911:-2490	Msa1342560:CDS
GCTGACTCTTGGGCTTGAAC+CGG	0.417029	tig0005911:-2340	Msa1342560:CDS
AGACCGGGTTTGGCTTGGTT+CGG	0.417093	tig0005911:-2212	Msa1342560:three_prime_UTR
CGGTTCATCACCTCCTCAAC+CGG	0.421068	tig0005911:+2546	None:intergenic
ACCGGTCGGCTCAGTTGAAC+CGG	0.430775	tig0005911:+2578	None:intergenic
CTTCAATATCCGGCTTAGAC+CGG	0.432623	tig0005911:-2228	Msa1342560:exon
AACCGACTGAACCGTAAATT+GGG	0.433750	tig0005911:+2880	None:intergenic
ACGGTTCAGTCGGTTTATTA+TGG	0.442488	tig0005911:-2872	Msa1342560:CDS
GCCGACCGGTTCGGTTGAAC+CGG	0.442999	tig0005911:-2565	Msa1342560:CDS
TGGCATTAGCTTGTGATTCA+GGG	0.445704	tig0005911:+3303	None:intergenic
GTATTGAAGGATTGTGGTGT+TGG	0.451012	tig0005911:-2273	Msa1342560:CDS
GAGAGTGGAGAGGAAAAGGT+TGG	0.454972	tig0005911:-2369	Msa1342560:CDS
CTTCGGAAGCAGCTGCTAAC+GGG	0.456571	tig0005911:-2779	Msa1342560:CDS
GCCAAATTCTACGGTCGTGC+TGG	0.457716	tig0005911:-3269	Msa1342560:CDS
TTCAATATCCGGCTTAGACC+GGG	0.462376	tig0005911:-2227	Msa1342560:exon
CCAGTCTGAGGCGGTTGCGT+TGG	0.463877	tig0005911:-2493	Msa1342560:CDS
GAAGCAGCTGCTAACGGGAG+GGG	0.464479	tig0005911:-2774	Msa1342560:CDS
GTGTTTCTCGCCAAATTCTA+CGG	0.467341	tig0005911:-3278	Msa1342560:CDS
TTCAACTGAGCCGACCGGTT+CGG	0.472535	tig0005911:-2574	Msa1342560:CDS
CTCAACCGGTTCAACCGAAC+CGG	0.476475	tig0005911:+2560	None:intergenic
GAGAACAAGGGATTTGAATC+CGG	0.487023	tig0005911:-2597	Msa1342560:CDS
GAGGCGGTTGCGTTGGTGGA+TGG	0.487638	tig0005911:-2486	Msa1342560:CDS
ATTTAGAGATGAACCGGAGT+TGG	0.489333	tig0005911:-2424	Msa1342560:CDS
CGGTTCGGTTGAACCGGTTG+AGG	0.489995	tig0005911:-2559	Msa1342560:CDS
GTTTATTATGGTCTGGAAGT+TGG	0.494688	tig0005911:-2860	Msa1342560:CDS
AAGCCAAACCCGGTCTAAGC+CGG	0.498806	tig0005911:+2219	None:intergenic
TGCATATGATGATGCATCAA+TGG	0.501398	tig0005911:+1942	None:intergenic
TGGTTCCTGTGAAGAAAAGA+AGG	0.501528	tig0005911:-2299	Msa1342560:CDS
ATGTCATAGGCTTTGAGTGG+TGG	0.508004	tig0005911:+2750	None:intergenic
GAGATGAACCGGAGTTGGAC+CGG	0.508299	tig0005911:-2419	Msa1342560:CDS
TGTAGATGAGAAAGTACATT+CGG	0.513037	tig0005911:-2002	Msa1342560:three_prime_UTR
GACTCTTTGTTGAGTTAACT+CGG	0.513097	tig0005911:+2689	None:intergenic
TCAAGTTGTTACAACTTACA+AGG	0.514711	tig0005911:-1967	Msa1342560:three_prime_UTR
CCAACGCAACCGCCTCAGAC+TGG	0.515999	tig0005911:+2493	None:intergenic
AGGATTGTGGTGTTGGCTCA+TGG	0.516288	tig0005911:-2266	Msa1342560:CDS
TCAGTCGGTTTATTATGGTC+TGG	0.516532	tig0005911:-2867	Msa1342560:CDS
CGGTTGAGGAGGTGATGAAC+CGG	0.528263	tig0005911:-2545	Msa1342560:CDS
GAAGTAAACAACCAAATTTG+TGG	0.529591	tig0005911:+3731	None:intergenic
AAAGAGTAGTAACGAGAACA+AGG	0.530460	tig0005911:-2610	Msa1342560:CDS
TGGGCGAAGATGTTCGGGGC+CGG	0.531449	tig0005911:+3226	None:intergenic
ACTTCGGAAGCAGCTGCTAA+CGG	0.537457	tig0005911:-2780	Msa1342560:CDS
TGTCATAGGCTTTGAGTGGT+GGG	0.543552	tig0005911:+2751	None:intergenic
GGTTGTAGAGTACTAAGAAA+AGG	0.544678	tig0005911:-3374	Msa1342560:CDS
GCTCATGGAATGTGGAGTTG+GGG	0.544869	tig0005911:-2251	Msa1342560:CDS
AAAATATGGGAAAGAAAGAA+GGG	0.546091	tig0005911:+3509	None:intergenic
TTCGGTTGAACCGGTTGAGG+AGG	0.552024	tig0005911:-2556	Msa1342560:CDS
GTTCGGGGCCGGCGTTAACA+AGG	0.559258	tig0005911:+3237	None:intergenic
AAGAAAACACTAACAAAATG+AGG	0.561350	tig0005911:-1880	None:intergenic
GGCCCCGAACATCTTCGCCC+AGG	0.562725	tig0005911:-3224	Msa1342560:intron
ACCGATCACGCCGATAACTT+CGG	0.564329	tig0005911:-2796	Msa1342560:CDS
TCTAGTACCTGAAAATCCAT+TGG	0.565036	tig0005911:-3574	Msa1342560:five_prime_UTR
AACCCAATTTACGGTTCAGT+CGG	0.566554	tig0005911:-2882	Msa1342560:CDS
TGACATCCGTCATGTGTCAA+AGG	0.571163	tig0005911:-2733	Msa1342560:CDS
AAAGAGAAAGAGAAAGCCAA+TGG	0.572825	tig0005911:+3558	None:intergenic
AACCCCAACCTCCCTGAATG+TGG	0.572844	tig0005911:-3704	Msa1342560:five_prime_UTR
GTTGACCGAACCAGTGAGAG+TGG	0.575650	tig0005911:-2384	Msa1342560:CDS
TTTCCTCCTTTGACACATGA+CGG	0.578090	tig0005911:+2727	None:intergenic
GGAAGCAGCTGCTAACGGGA+GGG	0.580906	tig0005911:-2775	Msa1342560:CDS
CTCAACAAAGAGTCAAGACT+CGG	0.582942	tig0005911:-2680	Msa1342560:CDS
TGGTGTTGGCTCATGGAATG+TGG	0.583661	tig0005911:-2259	Msa1342560:CDS
TGTGTCAAAGGAGGAAAACT+CGG	0.592571	tig0005911:-2721	Msa1342560:CDS
TCCGGTTCAACTGAGCCGAC+CGG	0.592967	tig0005911:-2579	Msa1342560:CDS
GCATAAGACCTTGTTTACAA+TGG	0.593219	tig0005911:-3334	Msa1342560:CDS
AAACCGAACCAAGCCAAACC+CGG	0.593382	tig0005911:+2209	None:intergenic
GGTTTCACGCGTTTATCACG+TGG	0.593523	tig0005911:-2319	Msa1342560:CDS
TCAAGACTCGGTCGCGTAAG+CGG	0.609713	tig0005911:-2668	Msa1342560:CDS
AGGGTTGTATTGAAGGATTG+TGG	0.614044	tig0005911:-2279	Msa1342560:CDS
AAAATGCGGATGAGTTGTAA+CGG	0.616520	tig0005911:-3395	Msa1342560:CDS
GTCGATTAGCCACCAGTCTG+AGG	0.618436	tig0005911:-2505	Msa1342560:CDS
GTAGAATTTGGCGAGAAACA+CGG	0.619114	tig0005911:+3280	None:intergenic
CAAGCCGAAGATACAAGAAG+AGG	0.623975	tig0005911:-2634	Msa1342560:CDS
GTTGGACCGGAAAATGAAGC+CGG	0.627386	tig0005911:-2406	Msa1342560:CDS
CAAGTTGTTACAACTTACAA+GGG	0.635758	tig0005911:-1966	Msa1342560:three_prime_UTR
ACCGGTTCAACCGAACCGGT+CGG	0.636400	tig0005911:+2564	None:intergenic
ACGCAACCGCCTCAGACTGG+TGG	0.636669	tig0005911:+2496	None:intergenic
CTCATGAACCTTGTTAACGC+CGG	0.636693	tig0005911:-3245	Msa1342560:CDS
ACGACTCATGACTAGCTGAC+CGG	0.638954	tig0005911:+2526	None:intergenic
GCAGCTATGTCAAGCCGCAG+TGG	0.645652	tig0005911:-2838	Msa1342560:CDS
CATCCGTCATGTGTCAAAGG+AGG	0.657307	tig0005911:-2730	Msa1342560:CDS
TCGTTGTTGTACGAAGCATG+TGG	0.660850	tig0005911:-2915	Msa1342560:CDS
CCGAACCAGTGAGAGTGGAG+AGG	0.672740	tig0005911:-2379	Msa1342560:CDS
GGTTCCTGTGAAGAAAAGAA+GGG	0.688577	tig0005911:-2298	Msa1342560:CDS
GATTAGCCACCAGTCTGAGG+CGG	0.698548	tig0005911:-2502	Msa1342560:CDS
CGGATGTCATAGGCTTTGAG+TGG	0.702654	tig0005911:+2747	None:intergenic
AAGAGTAGTAACGAGAACAA+GGG	0.713391	tig0005911:-2609	Msa1342560:CDS
AACCTGGGCGAAGATGTTCG+GGG	0.750313	tig0005911:+3222	None:intergenic
GAATTTGGCGAGAAACACGG+TGG	0.783343	tig0005911:+3283	None:intergenic
TTTCAAAACAGCTTCCACTG+CGG	0.791709	tig0005911:+2824	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATCTTTTATTTTTTCAAT+TGG	-	tig0005911:2186-2205	Msa1342560:three_prime_UTR	10.0%
!!!	AATCTTTTATTTTTTCAATT+GGG	-	tig0005911:2187-2206	Msa1342560:three_prime_UTR	10.0%
!!!	AAATCTTTTATTTTTTCAAT+TGG	-	tig0005911:2186-2205	Msa1342560:three_prime_UTR	10.0%
!!!	AATCTTTTATTTTTTCAATT+GGG	-	tig0005911:2187-2206	Msa1342560:three_prime_UTR	10.0%
!!!	GAAAATTTTCATTAAAAATG+CGG	-	tig0005911:2215-2234	Msa1342560:exon	15.0%
!!	AACAACAAAAAGTTATTAAA+AGG	+	tig0005911:3542-3561	None:intergenic	15.0%
!!!	GAAAATTTTCATTAAAAATG+CGG	-	tig0005911:2215-2234	Msa1342560:exon	15.0%
!!	AACAACAAAAAGTTATTAAA+AGG	+	tig0005911:3542-3561	None:intergenic	15.0%
!!	ATTGTGTCTATGAAAAATAT+GGG	+	tig0005911:2131-2150	None:intergenic	20.0%
!!	GAAAAATTAGACTTTGATAT+AGG	+	tig0005911:2160-2179	None:intergenic	20.0%
!!!	ACAAATATATCAACTTTTGT+TGG	+	tig0005911:2577-2596	None:intergenic	20.0%
!!	ATTAAAAACTAAACAAGAAC+TGG	+	tig0005911:3510-3529	None:intergenic	20.0%
!!!	ACTTTTTGTTGTTTACATTT+TGG	-	tig0005911:3549-3568	Msa1342560:five_prime_UTR	20.0%
!!!	CTTTTTGTTGTTTACATTTT+GGG	-	tig0005911:3550-3569	Msa1342560:five_prime_UTR	20.0%
!!	ATTGTGTCTATGAAAAATAT+GGG	+	tig0005911:2131-2150	None:intergenic	20.0%
!!	GAAAAATTAGACTTTGATAT+AGG	+	tig0005911:2160-2179	None:intergenic	20.0%
!!!	ACAAATATATCAACTTTTGT+TGG	+	tig0005911:2577-2596	None:intergenic	20.0%
!!	ATTAAAAACTAAACAAGAAC+TGG	+	tig0005911:3510-3529	None:intergenic	20.0%
!!!	ACTTTTTGTTGTTTACATTT+TGG	-	tig0005911:3549-3568	Msa1342560:five_prime_UTR	20.0%
!!!	CTTTTTGTTGTTTACATTTT+GGG	-	tig0005911:3550-3569	Msa1342560:five_prime_UTR	20.0%
!	TTTATCTTGTTCCACAAATT+TGG	-	tig0005911:1882-1901	Msa1342560:three_prime_UTR	25.0%
!	TGTGTTTACTATAAAAACCA+TGG	+	tig0005911:1951-1970	None:intergenic	25.0%
!	AAAATATGGGAAAGAAAGAA+GGG	+	tig0005911:2118-2137	None:intergenic	25.0%
!	AAAAATATGGGAAAGAAAGA+AGG	+	tig0005911:2119-2138	None:intergenic	25.0%
!	GATTGTGTCTATGAAAAATA+TGG	+	tig0005911:2132-2151	None:intergenic	25.0%
!	AAGAAAACACTAACAAAATG+AGG	-	tig0005911:3744-3763	Msa1342560:five_prime_UTR	25.0%
!	TTTATCTTGTTCCACAAATT+TGG	-	tig0005911:1882-1901	Msa1342560:three_prime_UTR	25.0%
!	TGTGTTTACTATAAAAACCA+TGG	+	tig0005911:1951-1970	None:intergenic	25.0%
!	AAAATATGGGAAAGAAAGAA+GGG	+	tig0005911:2118-2137	None:intergenic	25.0%
!	AAAAATATGGGAAAGAAAGA+AGG	+	tig0005911:2119-2138	None:intergenic	25.0%
!	GATTGTGTCTATGAAAAATA+TGG	+	tig0005911:2132-2151	None:intergenic	25.0%
	GAAGTAAACAACCAAATTTG+TGG	+	tig0005911:1896-1915	None:intergenic	30.0%
!!!	ATTTTCAGGTACTAGATTGT+GGG	+	tig0005911:2046-2065	None:intergenic	30.0%
!	CTTTTGATCCATTGTAAACA+AGG	+	tig0005911:2301-2320	None:intergenic	30.0%
	TTAGTGCATGTTTAGATTGA+CGG	-	tig0005911:2459-2478	Msa1342560:CDS	30.0%
	GTATTGCATGTTTGGATAAA+CGG	+	tig0005911:2526-2545	None:intergenic	30.0%
	ATCTCTCTATGAGAAAAAGT+TGG	-	tig0005911:2550-2569	Msa1342560:CDS	30.0%
!	TTTTCCTCTTCTTGTATCTT+CGG	+	tig0005911:2997-3016	None:intergenic	30.0%
!	GATCTTATTTAGAGATGAAC+CGG	-	tig0005911:3194-3213	Msa1342560:intron	30.0%
	ACTTTCTCATCTACATAGTT+TGG	+	tig0005911:3617-3636	None:intergenic	30.0%
!	TGTAGATGAGAAAGTACATT+CGG	-	tig0005911:3622-3641	Msa1342560:five_prime_UTR	30.0%
	TGTAAGTTGTAACAACTTGA+TGG	+	tig0005911:3657-3676	None:intergenic	30.0%
!	TCAAGTTGTTACAACTTACA+AGG	-	tig0005911:3657-3676	Msa1342560:five_prime_UTR	30.0%
	CAAGTTGTTACAACTTACAA+GGG	-	tig0005911:3658-3677	Msa1342560:five_prime_UTR	30.0%
	GAAGTAAACAACCAAATTTG+TGG	+	tig0005911:1896-1915	None:intergenic	30.0%
!!!	ATTTTCAGGTACTAGATTGT+GGG	+	tig0005911:2046-2065	None:intergenic	30.0%
!	CTTTTGATCCATTGTAAACA+AGG	+	tig0005911:2301-2320	None:intergenic	30.0%
	TTAGTGCATGTTTAGATTGA+CGG	-	tig0005911:2459-2478	Msa1342560:CDS	30.0%
	GTATTGCATGTTTGGATAAA+CGG	+	tig0005911:2526-2545	None:intergenic	30.0%
	ATCTCTCTATGAGAAAAAGT+TGG	-	tig0005911:2550-2569	Msa1342560:CDS	30.0%
!	TTTTCCTCTTCTTGTATCTT+CGG	+	tig0005911:2997-3016	None:intergenic	30.0%
!	GATCTTATTTAGAGATGAAC+CGG	-	tig0005911:3194-3213	Msa1342560:intron	30.0%
	ACTTTCTCATCTACATAGTT+TGG	+	tig0005911:3617-3636	None:intergenic	30.0%
!	TGTAGATGAGAAAGTACATT+CGG	-	tig0005911:3622-3641	Msa1342560:five_prime_UTR	30.0%
	TGTAAGTTGTAACAACTTGA+TGG	+	tig0005911:3657-3676	None:intergenic	30.0%
!	TCAAGTTGTTACAACTTACA+AGG	-	tig0005911:3657-3676	Msa1342560:five_prime_UTR	30.0%
	CAAGTTGTTACAACTTACAA+GGG	-	tig0005911:3658-3677	Msa1342560:five_prime_UTR	30.0%
!!!	TTTTCAGGTACTAGATTGTG+GGG	+	tig0005911:2045-2064	None:intergenic	35.0%
!!!	GATTTTCAGGTACTAGATTG+TGG	+	tig0005911:2047-2066	None:intergenic	35.0%
	TCTAGTACCTGAAAATCCAT+TGG	-	tig0005911:2050-2069	Msa1342560:three_prime_UTR	35.0%
	AAAGAGAAAGAGAAAGCCAA+TGG	+	tig0005911:2069-2088	None:intergenic	35.0%
	AAAATGCGGATGAGTTGTAA+CGG	-	tig0005911:2229-2248	Msa1342560:exon	35.0%
!	GGTTGTAGAGTACTAAGAAA+AGG	-	tig0005911:2250-2269	Msa1342560:CDS	35.0%
!	GCATAAGACCTTGTTTACAA+TGG	-	tig0005911:2290-2309	Msa1342560:CDS	35.0%
	AGATGTGTGTATTGCATGTT+TGG	+	tig0005911:2534-2553	None:intergenic	35.0%
	CGAATAGTGAACCCAATTTA+CGG	-	tig0005911:2733-2752	Msa1342560:CDS	35.0%
	GTTTATTATGGTCTGGAAGT+TGG	-	tig0005911:2764-2783	Msa1342560:CDS	35.0%
	GACTCTTTGTTGAGTTAACT+CGG	+	tig0005911:2938-2957	None:intergenic	35.0%
	AAAGAGTAGTAACGAGAACA+AGG	-	tig0005911:3014-3033	Msa1342560:intron	35.0%
	AAGAGTAGTAACGAGAACAA+GGG	-	tig0005911:3015-3034	Msa1342560:intron	35.0%
	GAAAAGAAGGGTTGTATTGA+AGG	-	tig0005911:3338-3357	Msa1342560:CDS	35.0%
!!!	TGGTTCAGTTTTGACTTAAG+CGG	-	tig0005911:3438-3457	Msa1342560:five_prime_UTR	35.0%
!	TGCATATGATGATGCATCAA+TGG	+	tig0005911:3685-3704	None:intergenic	35.0%
!!!	TTTTCAGGTACTAGATTGTG+GGG	+	tig0005911:2045-2064	None:intergenic	35.0%
!!!	GATTTTCAGGTACTAGATTG+TGG	+	tig0005911:2047-2066	None:intergenic	35.0%
	TCTAGTACCTGAAAATCCAT+TGG	-	tig0005911:2050-2069	Msa1342560:three_prime_UTR	35.0%
	AAAGAGAAAGAGAAAGCCAA+TGG	+	tig0005911:2069-2088	None:intergenic	35.0%
	AAAATGCGGATGAGTTGTAA+CGG	-	tig0005911:2229-2248	Msa1342560:exon	35.0%
!	GGTTGTAGAGTACTAAGAAA+AGG	-	tig0005911:2250-2269	Msa1342560:CDS	35.0%
!	GCATAAGACCTTGTTTACAA+TGG	-	tig0005911:2290-2309	Msa1342560:CDS	35.0%
	AGATGTGTGTATTGCATGTT+TGG	+	tig0005911:2534-2553	None:intergenic	35.0%
	CGAATAGTGAACCCAATTTA+CGG	-	tig0005911:2733-2752	Msa1342560:CDS	35.0%
	GTTTATTATGGTCTGGAAGT+TGG	-	tig0005911:2764-2783	Msa1342560:CDS	35.0%
	GACTCTTTGTTGAGTTAACT+CGG	+	tig0005911:2938-2957	None:intergenic	35.0%
	AAAGAGTAGTAACGAGAACA+AGG	-	tig0005911:3014-3033	Msa1342560:intron	35.0%
	AAGAGTAGTAACGAGAACAA+GGG	-	tig0005911:3015-3034	Msa1342560:intron	35.0%
	GAAAAGAAGGGTTGTATTGA+AGG	-	tig0005911:3338-3357	Msa1342560:CDS	35.0%
!!!	TGGTTCAGTTTTGACTTAAG+CGG	-	tig0005911:3438-3457	Msa1342560:five_prime_UTR	35.0%
!	TGCATATGATGATGCATCAA+TGG	+	tig0005911:3685-3704	None:intergenic	35.0%
!	CCATGGTTTTTCCACATTCA+GGG	+	tig0005911:1934-1953	None:intergenic	40.0%
!	ACCATGGTTTTTCCACATTC+AGG	+	tig0005911:1935-1954	None:intergenic	40.0%
!!	GAGAAAGCCAATGGATTTTC+AGG	+	tig0005911:2060-2079	None:intergenic	40.0%
!!	TGGCATTAGCTTGTGATTCA+GGG	+	tig0005911:2324-2343	None:intergenic	40.0%
	GTAGAATTTGGCGAGAAACA+CGG	+	tig0005911:2347-2366	None:intergenic	40.0%
	GTGTTTCTCGCCAAATTCTA+CGG	-	tig0005911:2346-2365	Msa1342560:CDS	40.0%
!!!	GTGTCACTTTTTACGAACCT+GGG	+	tig0005911:2420-2439	None:intergenic	40.0%
!!!	AGTGTCACTTTTTACGAACC+TGG	+	tig0005911:2421-2440	None:intergenic	40.0%
	AACCCAATTTACGGTTCAGT+CGG	-	tig0005911:2742-2761	Msa1342560:CDS	40.0%
	AACCGACTGAACCGTAAATT+GGG	+	tig0005911:2747-2766	None:intergenic	40.0%
	AAACCGACTGAACCGTAAAT+TGG	+	tig0005911:2748-2767	None:intergenic	40.0%
!	ACGGTTCAGTCGGTTTATTA+TGG	-	tig0005911:2752-2771	Msa1342560:CDS	40.0%
!	TCAGTCGGTTTATTATGGTC+TGG	-	tig0005911:2757-2776	Msa1342560:CDS	40.0%
	TTTCAAAACAGCTTCCACTG+CGG	+	tig0005911:2803-2822	None:intergenic	40.0%
	TTTCCTCCTTTGACACATGA+CGG	+	tig0005911:2900-2919	None:intergenic	40.0%
	TGTGTCAAAGGAGGAAAACT+CGG	-	tig0005911:2903-2922	Msa1342560:CDS	40.0%
	CTCAACAAAGAGTCAAGACT+CGG	-	tig0005911:2944-2963	Msa1342560:intron	40.0%
	GAGAACAAGGGATTTGAATC+CGG	-	tig0005911:3027-3046	Msa1342560:intron	40.0%
	ATTTAGAGATGAACCGGAGT+TGG	-	tig0005911:3200-3219	Msa1342560:intron	40.0%
	TGGTTCCTGTGAAGAAAAGA+AGG	-	tig0005911:3325-3344	Msa1342560:CDS	40.0%
	GGTTCCTGTGAAGAAAAGAA+GGG	-	tig0005911:3326-3345	Msa1342560:CDS	40.0%
!	ACAACCCTTCTTTTCTTCAC+AGG	+	tig0005911:3333-3352	None:intergenic	40.0%
	AGGGTTGTATTGAAGGATTG+TGG	-	tig0005911:3345-3364	Msa1342560:CDS	40.0%
	GTATTGAAGGATTGTGGTGT+TGG	-	tig0005911:3351-3370	Msa1342560:CDS	40.0%
!	CCATGGTTTTTCCACATTCA+GGG	+	tig0005911:1934-1953	None:intergenic	40.0%
!	ACCATGGTTTTTCCACATTC+AGG	+	tig0005911:1935-1954	None:intergenic	40.0%
!!	GAGAAAGCCAATGGATTTTC+AGG	+	tig0005911:2060-2079	None:intergenic	40.0%
!!	TGGCATTAGCTTGTGATTCA+GGG	+	tig0005911:2324-2343	None:intergenic	40.0%
	GTAGAATTTGGCGAGAAACA+CGG	+	tig0005911:2347-2366	None:intergenic	40.0%
	GTGTTTCTCGCCAAATTCTA+CGG	-	tig0005911:2346-2365	Msa1342560:CDS	40.0%
!!!	GTGTCACTTTTTACGAACCT+GGG	+	tig0005911:2420-2439	None:intergenic	40.0%
!!!	AGTGTCACTTTTTACGAACC+TGG	+	tig0005911:2421-2440	None:intergenic	40.0%
	AACCCAATTTACGGTTCAGT+CGG	-	tig0005911:2742-2761	Msa1342560:CDS	40.0%
	AACCGACTGAACCGTAAATT+GGG	+	tig0005911:2747-2766	None:intergenic	40.0%
	AAACCGACTGAACCGTAAAT+TGG	+	tig0005911:2748-2767	None:intergenic	40.0%
!	ACGGTTCAGTCGGTTTATTA+TGG	-	tig0005911:2752-2771	Msa1342560:CDS	40.0%
!	TCAGTCGGTTTATTATGGTC+TGG	-	tig0005911:2757-2776	Msa1342560:CDS	40.0%
	TTTCAAAACAGCTTCCACTG+CGG	+	tig0005911:2803-2822	None:intergenic	40.0%
	TTTCCTCCTTTGACACATGA+CGG	+	tig0005911:2900-2919	None:intergenic	40.0%
	TGTGTCAAAGGAGGAAAACT+CGG	-	tig0005911:2903-2922	Msa1342560:CDS	40.0%
	CTCAACAAAGAGTCAAGACT+CGG	-	tig0005911:2944-2963	Msa1342560:intron	40.0%
	GAGAACAAGGGATTTGAATC+CGG	-	tig0005911:3027-3046	Msa1342560:intron	40.0%
	ATTTAGAGATGAACCGGAGT+TGG	-	tig0005911:3200-3219	Msa1342560:intron	40.0%
	TGGTTCCTGTGAAGAAAAGA+AGG	-	tig0005911:3325-3344	Msa1342560:CDS	40.0%
	GGTTCCTGTGAAGAAAAGAA+GGG	-	tig0005911:3326-3345	Msa1342560:CDS	40.0%
!	ACAACCCTTCTTTTCTTCAC+AGG	+	tig0005911:3333-3352	None:intergenic	40.0%
	AGGGTTGTATTGAAGGATTG+TGG	-	tig0005911:3345-3364	Msa1342560:CDS	40.0%
	GTATTGAAGGATTGTGGTGT+TGG	-	tig0005911:3351-3370	Msa1342560:CDS	40.0%
	TTTCCACATTCAGGGAGGTT+GGG	+	tig0005911:1926-1945	None:intergenic	45.0%
!	TTTTCCACATTCAGGGAGGT+TGG	+	tig0005911:1927-1946	None:intergenic	45.0%
!	TGGTTTTTCCACATTCAGGG+AGG	+	tig0005911:1931-1950	None:intergenic	45.0%
	CCCTGAATGTGGAAAAACCA+TGG	-	tig0005911:1931-1950	Msa1342560:three_prime_UTR	45.0%
!!	GTGGCATTAGCTTGTGATTC+AGG	+	tig0005911:2325-2344	None:intergenic	45.0%
	CTCATGAACCTTGTTAACGC+CGG	-	tig0005911:2379-2398	Msa1342560:CDS	45.0%
	TCGTTGTTGTACGAAGCATG+TGG	-	tig0005911:2709-2728	Msa1342560:CDS	45.0%
!!	GCAGTGGAAGCTGTTTTGAA+AGG	-	tig0005911:2802-2821	Msa1342560:CDS	45.0%
!!	TGTCATAGGCTTTGAGTGGT+GGG	+	tig0005911:2876-2895	None:intergenic	45.0%
!!	ATGTCATAGGCTTTGAGTGG+TGG	+	tig0005911:2877-2896	None:intergenic	45.0%
!!	TGACACATGACGGATGTCAT+AGG	+	tig0005911:2890-2909	None:intergenic	45.0%
	TGACATCCGTCATGTGTCAA+AGG	-	tig0005911:2891-2910	Msa1342560:CDS	45.0%
	CTCTTCTTGTATCTTCGGCT+TGG	+	tig0005911:2992-3011	None:intergenic	45.0%
	CAAGCCGAAGATACAAGAAG+AGG	-	tig0005911:2990-3009	Msa1342560:intron	45.0%
!	TTCATTTTCCGGTCCAACTC+CGG	+	tig0005911:3216-3235	None:intergenic	45.0%
!	TGGAGAGGAAAAGGTTGGTT+TGG	-	tig0005911:3260-3279	Msa1342560:CDS	45.0%
!!	TTGGTTTGGAGCTGACTCTT+GGG	-	tig0005911:3274-3293	Msa1342560:CDS	45.0%
	ACGTGATAAACGCGTGAAAC+CGG	+	tig0005911:3306-3325	None:intergenic	45.0%
	CTTCAATATCCGGCTTAGAC+CGG	-	tig0005911:3396-3415	Msa1342560:exon	45.0%
	TTCAATATCCGGCTTAGACC+GGG	-	tig0005911:3397-3416	Msa1342560:exon	45.0%
	TTTCCACATTCAGGGAGGTT+GGG	+	tig0005911:1926-1945	None:intergenic	45.0%
!	TTTTCCACATTCAGGGAGGT+TGG	+	tig0005911:1927-1946	None:intergenic	45.0%
!	TGGTTTTTCCACATTCAGGG+AGG	+	tig0005911:1931-1950	None:intergenic	45.0%
	CCCTGAATGTGGAAAAACCA+TGG	-	tig0005911:1931-1950	Msa1342560:three_prime_UTR	45.0%
!!	GTGGCATTAGCTTGTGATTC+AGG	+	tig0005911:2325-2344	None:intergenic	45.0%
	CTCATGAACCTTGTTAACGC+CGG	-	tig0005911:2379-2398	Msa1342560:CDS	45.0%
	TCGTTGTTGTACGAAGCATG+TGG	-	tig0005911:2709-2728	Msa1342560:CDS	45.0%
!!	GCAGTGGAAGCTGTTTTGAA+AGG	-	tig0005911:2802-2821	Msa1342560:CDS	45.0%
!!	TGTCATAGGCTTTGAGTGGT+GGG	+	tig0005911:2876-2895	None:intergenic	45.0%
!!	ATGTCATAGGCTTTGAGTGG+TGG	+	tig0005911:2877-2896	None:intergenic	45.0%
!!	TGACACATGACGGATGTCAT+AGG	+	tig0005911:2890-2909	None:intergenic	45.0%
	TGACATCCGTCATGTGTCAA+AGG	-	tig0005911:2891-2910	Msa1342560:CDS	45.0%
	CTCTTCTTGTATCTTCGGCT+TGG	+	tig0005911:2992-3011	None:intergenic	45.0%
	CAAGCCGAAGATACAAGAAG+AGG	-	tig0005911:2990-3009	Msa1342560:intron	45.0%
!	TTCATTTTCCGGTCCAACTC+CGG	+	tig0005911:3216-3235	None:intergenic	45.0%
!	TGGAGAGGAAAAGGTTGGTT+TGG	-	tig0005911:3260-3279	Msa1342560:CDS	45.0%
!!	TTGGTTTGGAGCTGACTCTT+GGG	-	tig0005911:3274-3293	Msa1342560:CDS	45.0%
	ACGTGATAAACGCGTGAAAC+CGG	+	tig0005911:3306-3325	None:intergenic	45.0%
	CTTCAATATCCGGCTTAGAC+CGG	-	tig0005911:3396-3415	Msa1342560:exon	45.0%
	TTCAATATCCGGCTTAGACC+GGG	-	tig0005911:3397-3416	Msa1342560:exon	45.0%
	TTCCACATTCAGGGAGGTTG+GGG	+	tig0005911:1925-1944	None:intergenic	50.0%
	GAATTTGGCGAGAAACACGG+TGG	+	tig0005911:2344-2363	None:intergenic	50.0%
	ACCAGCACGACCGTAGAATT+TGG	+	tig0005911:2359-2378	None:intergenic	50.0%
	ACCGATCACGCCGATAACTT+CGG	-	tig0005911:2828-2847	Msa1342560:CDS	50.0%
	TCCGAAGTTATCGGCGTGAT+CGG	+	tig0005911:2832-2851	None:intergenic	50.0%
	GCAGCTGCTTCCGAAGTTAT+CGG	+	tig0005911:2841-2860	None:intergenic	50.0%
	ACTTCGGAAGCAGCTGCTAA+CGG	-	tig0005911:2844-2863	Msa1342560:CDS	50.0%
!!	CGGATGTCATAGGCTTTGAG+TGG	+	tig0005911:2880-2899	None:intergenic	50.0%
	CATCCGTCATGTGTCAAAGG+AGG	-	tig0005911:2894-2913	Msa1342560:CDS	50.0%
!	ACGACTCATGACTAGCTGAC+CGG	+	tig0005911:3101-3120	None:intergenic	50.0%
	GTTGGACCGGAAAATGAAGC+CGG	-	tig0005911:3218-3237	Msa1342560:intron	50.0%
!!	GGTCAACCGGCTTCATTTTC+CGG	+	tig0005911:3227-3246	None:intergenic	50.0%
!	CTTTTCCTCTCCACTCTCAC+TGG	+	tig0005911:3253-3272	None:intergenic	50.0%
	CAGTGAGAGTGGAGAGGAAA+AGG	-	tig0005911:3251-3270	Msa1342560:CDS	50.0%
	GAGAGTGGAGAGGAAAAGGT+TGG	-	tig0005911:3255-3274	Msa1342560:CDS	50.0%
!!	GTTGGTTTGGAGCTGACTCT+TGG	-	tig0005911:3273-3292	Msa1342560:CDS	50.0%
	GGTTTCACGCGTTTATCACG+TGG	-	tig0005911:3305-3324	Msa1342560:CDS	50.0%
!!	AGGATTGTGGTGTTGGCTCA+TGG	-	tig0005911:3358-3377	Msa1342560:CDS	50.0%
!!	TGGTGTTGGCTCATGGAATG+TGG	-	tig0005911:3365-3384	Msa1342560:CDS	50.0%
	TGGCTCATGGAATGTGGAGT+TGG	-	tig0005911:3371-3390	Msa1342560:CDS	50.0%
	GGCTCATGGAATGTGGAGTT+GGG	-	tig0005911:3372-3391	Msa1342560:CDS	50.0%
	GCTCATGGAATGTGGAGTTG+GGG	-	tig0005911:3373-3392	Msa1342560:CDS	50.0%
	GGAGTTGGGGCTTCAATATC+CGG	-	tig0005911:3386-3405	Msa1342560:CDS	50.0%
	AAACCGAACCAAGCCAAACC+CGG	+	tig0005911:3418-3437	None:intergenic	50.0%
!!!	GGTTTGGCTTGGTTCGGTTT+TGG	-	tig0005911:3418-3437	Msa1342560:five_prime_UTR	50.0%
	TTCCACATTCAGGGAGGTTG+GGG	+	tig0005911:1925-1944	None:intergenic	50.0%
	GAATTTGGCGAGAAACACGG+TGG	+	tig0005911:2344-2363	None:intergenic	50.0%
	ACCAGCACGACCGTAGAATT+TGG	+	tig0005911:2359-2378	None:intergenic	50.0%
	ACCGATCACGCCGATAACTT+CGG	-	tig0005911:2828-2847	Msa1342560:CDS	50.0%
	TCCGAAGTTATCGGCGTGAT+CGG	+	tig0005911:2832-2851	None:intergenic	50.0%
	GCAGCTGCTTCCGAAGTTAT+CGG	+	tig0005911:2841-2860	None:intergenic	50.0%
	ACTTCGGAAGCAGCTGCTAA+CGG	-	tig0005911:2844-2863	Msa1342560:CDS	50.0%
!!	CGGATGTCATAGGCTTTGAG+TGG	+	tig0005911:2880-2899	None:intergenic	50.0%
	CATCCGTCATGTGTCAAAGG+AGG	-	tig0005911:2894-2913	Msa1342560:CDS	50.0%
!	ACGACTCATGACTAGCTGAC+CGG	+	tig0005911:3101-3120	None:intergenic	50.0%
	GTTGGACCGGAAAATGAAGC+CGG	-	tig0005911:3218-3237	Msa1342560:intron	50.0%
!!	GGTCAACCGGCTTCATTTTC+CGG	+	tig0005911:3227-3246	None:intergenic	50.0%
!	CTTTTCCTCTCCACTCTCAC+TGG	+	tig0005911:3253-3272	None:intergenic	50.0%
	CAGTGAGAGTGGAGAGGAAA+AGG	-	tig0005911:3251-3270	Msa1342560:CDS	50.0%
	GAGAGTGGAGAGGAAAAGGT+TGG	-	tig0005911:3255-3274	Msa1342560:CDS	50.0%
!!	GTTGGTTTGGAGCTGACTCT+TGG	-	tig0005911:3273-3292	Msa1342560:CDS	50.0%
	GGTTTCACGCGTTTATCACG+TGG	-	tig0005911:3305-3324	Msa1342560:CDS	50.0%
!!	AGGATTGTGGTGTTGGCTCA+TGG	-	tig0005911:3358-3377	Msa1342560:CDS	50.0%
!!	TGGTGTTGGCTCATGGAATG+TGG	-	tig0005911:3365-3384	Msa1342560:CDS	50.0%
	TGGCTCATGGAATGTGGAGT+TGG	-	tig0005911:3371-3390	Msa1342560:CDS	50.0%
	GGCTCATGGAATGTGGAGTT+GGG	-	tig0005911:3372-3391	Msa1342560:CDS	50.0%
	GCTCATGGAATGTGGAGTTG+GGG	-	tig0005911:3373-3392	Msa1342560:CDS	50.0%
	GGAGTTGGGGCTTCAATATC+CGG	-	tig0005911:3386-3405	Msa1342560:CDS	50.0%
	AAACCGAACCAAGCCAAACC+CGG	+	tig0005911:3418-3437	None:intergenic	50.0%
!!!	GGTTTGGCTTGGTTCGGTTT+TGG	-	tig0005911:3418-3437	Msa1342560:five_prime_UTR	50.0%
	AACCCCAACCTCCCTGAATG+TGG	-	tig0005911:1920-1939	Msa1342560:three_prime_UTR	55.0%
	GCCAAATTCTACGGTCGTGC+TGG	-	tig0005911:2355-2374	Msa1342560:CDS	55.0%
	AACCTGGGCGAAGATGTTCG+GGG	+	tig0005911:2405-2424	None:intergenic	55.0%
	GAACCTGGGCGAAGATGTTC+GGG	+	tig0005911:2406-2425	None:intergenic	55.0%
	CGAACCTGGGCGAAGATGTT+CGG	+	tig0005911:2407-2426	None:intergenic	55.0%
	CTTCGGAAGCAGCTGCTAAC+GGG	-	tig0005911:2845-2864	Msa1342560:CDS	55.0%
!	TCAAGACTCGGTCGCGTAAG+CGG	-	tig0005911:2956-2975	Msa1342560:intron	55.0%
	TTCAACTGAGCCGACCGGTT+CGG	-	tig0005911:3050-3069	Msa1342560:intron	55.0%
!	CTCAACCGGTTCAACCGAAC+CGG	+	tig0005911:3067-3086	None:intergenic	55.0%
	TTCGGTTGAACCGGTTGAGG+AGG	-	tig0005911:3068-3087	Msa1342560:intron	55.0%
	CGGTTCATCACCTCCTCAAC+CGG	+	tig0005911:3081-3100	None:intergenic	55.0%
	CGGTTGAGGAGGTGATGAAC+CGG	-	tig0005911:3079-3098	Msa1342560:intron	55.0%
!	GTCGATTAGCCACCAGTCTG+AGG	-	tig0005911:3119-3138	Msa1342560:intron	55.0%
!	GATTAGCCACCAGTCTGAGG+CGG	-	tig0005911:3122-3141	Msa1342560:intron	55.0%
	GAGATGAACCGGAGTTGGAC+CGG	-	tig0005911:3205-3224	Msa1342560:intron	55.0%
!!	CTCTCACTGGTTCGGTCAAC+CGG	+	tig0005911:3240-3259	None:intergenic	55.0%
	GTTGACCGAACCAGTGAGAG+TGG	-	tig0005911:3240-3259	Msa1342560:CDS	55.0%
!	CCTCTCCACTCTCACTGGTT+CGG	+	tig0005911:3248-3267	None:intergenic	55.0%
!	GCTGACTCTTGGGCTTGAAC+CGG	-	tig0005911:3284-3303	Msa1342560:CDS	55.0%
	TATCCGGCTTAGACCGGGTT+TGG	-	tig0005911:3402-3421	Msa1342560:exon	55.0%
	AAGCCAAACCCGGTCTAAGC+CGG	+	tig0005911:3408-3427	None:intergenic	55.0%
!!	AGACCGGGTTTGGCTTGGTT+CGG	-	tig0005911:3412-3431	Msa1342560:exon	55.0%
	AACCCCAACCTCCCTGAATG+TGG	-	tig0005911:1920-1939	Msa1342560:three_prime_UTR	55.0%
	GCCAAATTCTACGGTCGTGC+TGG	-	tig0005911:2355-2374	Msa1342560:CDS	55.0%
	AACCTGGGCGAAGATGTTCG+GGG	+	tig0005911:2405-2424	None:intergenic	55.0%
	GAACCTGGGCGAAGATGTTC+GGG	+	tig0005911:2406-2425	None:intergenic	55.0%
	CGAACCTGGGCGAAGATGTT+CGG	+	tig0005911:2407-2426	None:intergenic	55.0%
	CTTCGGAAGCAGCTGCTAAC+GGG	-	tig0005911:2845-2864	Msa1342560:CDS	55.0%
!	TCAAGACTCGGTCGCGTAAG+CGG	-	tig0005911:2956-2975	Msa1342560:intron	55.0%
	TTCAACTGAGCCGACCGGTT+CGG	-	tig0005911:3050-3069	Msa1342560:intron	55.0%
!	CTCAACCGGTTCAACCGAAC+CGG	+	tig0005911:3067-3086	None:intergenic	55.0%
	TTCGGTTGAACCGGTTGAGG+AGG	-	tig0005911:3068-3087	Msa1342560:intron	55.0%
	CGGTTCATCACCTCCTCAAC+CGG	+	tig0005911:3081-3100	None:intergenic	55.0%
	CGGTTGAGGAGGTGATGAAC+CGG	-	tig0005911:3079-3098	Msa1342560:intron	55.0%
!	GTCGATTAGCCACCAGTCTG+AGG	-	tig0005911:3119-3138	Msa1342560:intron	55.0%
!	GATTAGCCACCAGTCTGAGG+CGG	-	tig0005911:3122-3141	Msa1342560:intron	55.0%
	GAGATGAACCGGAGTTGGAC+CGG	-	tig0005911:3205-3224	Msa1342560:intron	55.0%
!!	CTCTCACTGGTTCGGTCAAC+CGG	+	tig0005911:3240-3259	None:intergenic	55.0%
	GTTGACCGAACCAGTGAGAG+TGG	-	tig0005911:3240-3259	Msa1342560:CDS	55.0%
!	CCTCTCCACTCTCACTGGTT+CGG	+	tig0005911:3248-3267	None:intergenic	55.0%
!	GCTGACTCTTGGGCTTGAAC+CGG	-	tig0005911:3284-3303	Msa1342560:CDS	55.0%
	TATCCGGCTTAGACCGGGTT+TGG	-	tig0005911:3402-3421	Msa1342560:exon	55.0%
	AAGCCAAACCCGGTCTAAGC+CGG	+	tig0005911:3408-3427	None:intergenic	55.0%
!!	AGACCGGGTTTGGCTTGGTT+CGG	-	tig0005911:3412-3431	Msa1342560:exon	55.0%
	GCAGCTATGTCAAGCCGCAG+TGG	-	tig0005911:2786-2805	Msa1342560:CDS	60.0%
	GGAAGCAGCTGCTAACGGGA+GGG	-	tig0005911:2849-2868	Msa1342560:CDS	60.0%
	GAAGCAGCTGCTAACGGGAG+GGG	-	tig0005911:2850-2869	Msa1342560:CDS	60.0%
	TCCGGTTCAACTGAGCCGAC+CGG	-	tig0005911:3045-3064	Msa1342560:intron	60.0%
!	ACCGGTCGGCTCAGTTGAAC+CGG	+	tig0005911:3049-3068	None:intergenic	60.0%
!	ACCGGTTCAACCGAACCGGT+CGG	+	tig0005911:3063-3082	None:intergenic	60.0%
!!	CGGTTCGGTTGAACCGGTTG+AGG	-	tig0005911:3065-3084	Msa1342560:intron	60.0%
	CCGAACCAGTGAGAGTGGAG+AGG	-	tig0005911:3245-3264	Msa1342560:CDS	60.0%
	GGCTTAGACCGGGTTTGGCT+TGG	-	tig0005911:3407-3426	Msa1342560:exon	60.0%
	GCAGCTATGTCAAGCCGCAG+TGG	-	tig0005911:2786-2805	Msa1342560:CDS	60.0%
	GGAAGCAGCTGCTAACGGGA+GGG	-	tig0005911:2849-2868	Msa1342560:CDS	60.0%
	GAAGCAGCTGCTAACGGGAG+GGG	-	tig0005911:2850-2869	Msa1342560:CDS	60.0%
	TCCGGTTCAACTGAGCCGAC+CGG	-	tig0005911:3045-3064	Msa1342560:intron	60.0%
!	ACCGGTCGGCTCAGTTGAAC+CGG	+	tig0005911:3049-3068	None:intergenic	60.0%
!	ACCGGTTCAACCGAACCGGT+CGG	+	tig0005911:3063-3082	None:intergenic	60.0%
!!	CGGTTCGGTTGAACCGGTTG+AGG	-	tig0005911:3065-3084	Msa1342560:intron	60.0%
	CCGAACCAGTGAGAGTGGAG+AGG	-	tig0005911:3245-3264	Msa1342560:CDS	60.0%
	GGCTTAGACCGGGTTTGGCT+TGG	-	tig0005911:3407-3426	Msa1342560:exon	60.0%
	GTTCGGGGCCGGCGTTAACA+AGG	+	tig0005911:2390-2409	None:intergenic	65.0%
	TGGGCGAAGATGTTCGGGGC+CGG	+	tig0005911:2401-2420	None:intergenic	65.0%
	CGGAAGCAGCTGCTAACGGG+AGG	-	tig0005911:2848-2867	Msa1342560:CDS	65.0%
!!	GCCGACCGGTTCGGTTGAAC+CGG	-	tig0005911:3059-3078	Msa1342560:intron	65.0%
	ACGCAACCGCCTCAGACTGG+TGG	+	tig0005911:3131-3150	None:intergenic	65.0%
	CCAACGCAACCGCCTCAGAC+TGG	+	tig0005911:3134-3153	None:intergenic	65.0%
!	CCAGTCTGAGGCGGTTGCGT+TGG	-	tig0005911:3131-3150	Msa1342560:intron	65.0%
!	GTCTGAGGCGGTTGCGTTGG+TGG	-	tig0005911:3134-3153	Msa1342560:intron	65.0%
!	GAGGCGGTTGCGTTGGTGGA+TGG	-	tig0005911:3138-3157	Msa1342560:intron	65.0%
	GTTCGGGGCCGGCGTTAACA+AGG	+	tig0005911:2390-2409	None:intergenic	65.0%
	TGGGCGAAGATGTTCGGGGC+CGG	+	tig0005911:2401-2420	None:intergenic	65.0%
	CGGAAGCAGCTGCTAACGGG+AGG	-	tig0005911:2848-2867	Msa1342560:CDS	65.0%
!!	GCCGACCGGTTCGGTTGAAC+CGG	-	tig0005911:3059-3078	Msa1342560:intron	65.0%
	ACGCAACCGCCTCAGACTGG+TGG	+	tig0005911:3131-3150	None:intergenic	65.0%
	CCAACGCAACCGCCTCAGAC+TGG	+	tig0005911:3134-3153	None:intergenic	65.0%
!	CCAGTCTGAGGCGGTTGCGT+TGG	-	tig0005911:3131-3150	Msa1342560:intron	65.0%
!	GTCTGAGGCGGTTGCGTTGG+TGG	-	tig0005911:3134-3153	Msa1342560:intron	65.0%
!	GAGGCGGTTGCGTTGGTGGA+TGG	-	tig0005911:3138-3157	Msa1342560:intron	65.0%
	GGCCCCGAACATCTTCGCCC+AGG	-	tig0005911:2400-2419	Msa1342560:CDS	70.0%
	GGCCCCGAACATCTTCGCCC+AGG	-	tig0005911:2400-2419	Msa1342560:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
tig0005911	gene	1881	3765	1881	ID=Msa1342560;Name=Msa1342560
tig0005911	mRNA	1881	3765	1881	ID=Msa1342560-mRNA-1;Parent=Msa1342560;Name=Msa1342560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=351\|1\|1\|1\|1\|1\|2\|352\|301
tig0005911	exon	1881	2948	1881	ID=Msa1342560-mRNA-1:exon:3637;Parent=Msa1342560-mRNA-1
tig0005911	exon	3225	3765	3225	ID=Msa1342560-mRNA-1:exon:3636;Parent=Msa1342560-mRNA-1
tig0005911	five_prime_UTR	3415	3765	3415	ID=Msa1342560-mRNA-1:five_prime_utr;Parent=Msa1342560-mRNA-1
tig0005911	CDS	3225	3414	3225	ID=Msa1342560-mRNA-1:cds;Parent=Msa1342560-mRNA-1
tig0005911	CDS	2233	2948	2233	ID=Msa1342560-mRNA-1:cds;Parent=Msa1342560-mRNA-1
tig0005911	three_prime_UTR	1881	2232	1881	ID=Msa1342560-mRNA-1:three_prime_utr;Parent=Msa1342560-mRNA-1

Gene Sequence

>Msa1342560

ATGCGGATGAGTTGTAACGGTTGTAGAGTACTAAGAAAAGGTTGCAGTGAAAACTGTAGCATAAGACCTTGTTTACAATGGATCAAAAGCCCTGAATCACAAGCTAATGCCACCGTGTTTCTCGCCAAATTCTACGGTCGTGCTGGTCTCATGAACCTTGTTAACGCCGGCCCCGAACATCTTCGCCCAGCAATTTTTCGTTCGTTGTTGTACGAAGCATGTGGTCGAATAGTGAACCCAATTTACGGTTCAGTCGGTTTATTATGGTCTGGAAGTTGGCAGCTATGTCAAGCCGCAGTGGAAGCTGTTTTGAAAGGCGCACCGATCACGCCGATAACTTCGGAAGCAGCTGCTAACGGGAGGGGCCCACCACTCAAAGCCTATGACATCCGTCATGTGTCAAAGGAGGAAAACTCGGCTGCATCGACCGAGTTAACTCAACAAAGAGTCAAGACTCGGTCGCGTAAGCGGTCGAGTTTAGCCAAGCCGAAGATACAAGAAGAGGAAAAGAGTAGTAACGAGAACAAGGGATTTGAATCCGGTTCAACTGAGCCGACCGGTTCGGTTGAACCGGTTGAGGAGGTGATGAACCGGTCAGCTAGTCATGAGTCGTCGATTAGCCACCAGTCTGAGGCGGTTGCGTTGGTGGATGGAGAGAGTAAAGATAGTGAGAGTGAAACTTCGATGATCTTATTTAGAGATGAACCGGAGTTGGACCGGAAAATGAAGCCGGTTGACCGAACCAGTGAGAGTGGAGAGGAAAAGGTTGGTTTGGAGCTGACTCTTGGGCTTGAACCGGTTTCACGCGTTTATCACGTGGTTCCTGTGAAGAAAAGAAGGGTTGTATTGAAGGATTGTGGTGTTGGCTCATGGAATGTGGAGTTGGGGCTTCAATATCCGGCTTAG

Protein sequence

>Msa1342560

MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKEENSAASTELTQQRVKTRSRKRSSLAKPKIQEEEKSSNENKGFESGSTEPTGSVEPVEEVMNRSASHESSISHQSEAVALVDGESKDSESETSMILFRDEPELDRKMKPVDRTSESGEEKVGLELTLGLEPVSRVYHVVPVKKRRVVLKDCGVGSWNVELGLQYPA*