Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051960 | XP_003621644.2 | 87.979 | 574 | 47 | 5 | 1 | 563 | 1 | 563 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051960 | sp|Q8LL04|CPL3_ARATH | 36.731 | 569 | 277 | 19 | 12 | 538 | 9 | 536 | 2.77e-59 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051960 | G7KSX8 | 87.979 | 574 | 47 | 5 | 1 | 563 | 1 | 563 | 0.0 | 907 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035320 | Msa1051960 | 0.806463 | 8.126458e-50 | -8.615850e-47 |
| Msa0116270 | Msa1051960 | 0.811129 | 8.168376e-51 | -8.615850e-47 |
| Msa0705500 | Msa1051960 | 0.837376 | 5.390177e-57 | -8.615850e-47 |
| Msa0741200 | Msa1051960 | 0.817121 | 3.887054e-52 | -8.615850e-47 |
| Msa0222160 | Msa1051960 | 0.809828 | 1.560183e-50 | -8.615850e-47 |
| Msa0423840 | Msa1051960 | 0.804953 | 1.686523e-49 | -8.615850e-47 |
| Msa0983770 | Msa1051960 | 0.821687 | 3.535962e-53 | -8.615850e-47 |
| Msa1051960 | Msa1143710 | 0.826862 | 2.148493e-54 | -8.615850e-47 |
| Msa1051960 | Msa1217670 | 0.813000 | 3.194491e-51 | -8.615850e-47 |
| Msa1051960 | Msa1237720 | 0.817498 | 3.196512e-52 | -8.615850e-47 |
| Msa1051960 | Msa1464370 | 0.804200 | 2.421618e-49 | -8.615850e-47 |
| Msa0263680 | Msa1051960 | 0.819266 | 1.270895e-52 | -8.615850e-47 |
| Msa0338960 | Msa1051960 | 0.807816 | 4.202294e-50 | -8.615850e-47 |
| Msa0969780 | Msa1051960 | 0.815462 | 9.132281e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051960 | MtrunA17_Chr7g0221561 | 87.979 | 574 | 47 | 5 | 1 | 563 | 1 | 563 | 0.0 | 907 |
| Msa1051960 | MtrunA17_Chr4g0066831 | 51.927 | 545 | 144 | 16 | 1 | 530 | 1 | 442 | 6.62e-136 | 422 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051960 | AT2G33540.1 | 36.731 | 569 | 277 | 19 | 12 | 538 | 9 | 536 | 2.82e-60 | 218 |
| Msa1051960 | AT2G33540.2 | 35.811 | 296 | 158 | 9 | 258 | 538 | 1 | 279 | 3.06e-31 | 130 |
Find 136 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTTAATAATTAATAAATT+AGG | 0.129799 | 7_2:-19933498 | None:intergenic |
| AGAATTGATGCAACAGGTTC+TGG | 0.196592 | 7_2:+19935564 | Msa1051960:CDS |
| GAGGTGGTGGTGGTGATTCT+AGG | 0.222806 | 7_2:+19933832 | Msa1051960:CDS |
| TTCGAAGAATTTGATTGAAA+TGG | 0.243333 | 7_2:+19933653 | Msa1051960:CDS |
| TTCTAGGGTTTGGGCTGTTC+AGG | 0.246411 | 7_2:+19933848 | Msa1051960:CDS |
| GAACGAACATTTATTTACTA+TGG | 0.270366 | 7_2:+19934769 | Msa1051960:CDS |
| TACTGAAGAGGATTTCAAAA+AGG | 0.276599 | 7_2:+19933737 | Msa1051960:CDS |
| GCGGTGGTGGATCGAGTTTC+CGG | 0.280145 | 7_2:-19933405 | None:intergenic |
| TTCCCTGTGGTAGATAGATT+TGG | 0.292697 | 7_2:+19935216 | Msa1051960:CDS |
| GGTTAATAATTAATAAATTA+GGG | 0.294115 | 7_2:-19933497 | None:intergenic |
| GGTGGATAAAAGTGATAATA+AGG | 0.304346 | 7_2:+19933794 | Msa1051960:CDS |
| ACTTCACATTGCTAAATTAG+AGG | 0.309168 | 7_2:+19936276 | Msa1051960:CDS |
| TTTGCAAAAGGAAGAGAATA+AGG | 0.313923 | 7_2:+19934614 | Msa1051960:CDS |
| GCTGATGAGTATATTTCTTC+TGG | 0.322767 | 7_2:+19935036 | Msa1051960:CDS |
| GATTTCTGATTCTGCTTCAT+TGG | 0.324447 | 7_2:+19933707 | Msa1051960:CDS |
| TACTATGGAGCATATGAAAA+AGG | 0.329294 | 7_2:+19934784 | Msa1051960:CDS |
| GTTGTGTGGTTAATTATTCA+TGG | 0.333143 | 7_2:+19933602 | Msa1051960:exon |
| TCGAAGAATTTGATTGAAAT+GGG | 0.333564 | 7_2:+19933654 | Msa1051960:CDS |
| TGGTGGTGATTCTAGGGTTT+GGG | 0.333758 | 7_2:+19933839 | Msa1051960:CDS |
| TCTTCCTTTAGAACCATTAT+CGG | 0.341309 | 7_2:-19936422 | None:intergenic |
| TATGGACAGAGCAATGTTAA+AGG | 0.344585 | 7_2:+19935105 | Msa1051960:CDS |
| GCATCGGAAGCCTTGCAATA+TGG | 0.346531 | 7_2:+19935087 | Msa1051960:CDS |
| GTGGTGGTGATTCTAGGGTT+TGG | 0.348164 | 7_2:+19933838 | Msa1051960:CDS |
| TTGGGTTGCCTCCTGCTGTT+AGG | 0.354376 | 7_2:+19935235 | Msa1051960:CDS |
| TTTCCAAGTCCAACTCCTTC+AGG | 0.358524 | 7_2:+19935387 | Msa1051960:CDS |
| AATTGATTCTGTATATGCTT+TGG | 0.359844 | 7_2:+19934939 | Msa1051960:CDS |
| AAAACTGGTGGTGGAGGTGG+TGG | 0.366330 | 7_2:+19933819 | Msa1051960:CDS |
| ATTGTAGGTGTTCTGCTCTA+TGG | 0.366459 | 7_2:+19934587 | Msa1051960:intron |
| AGTGATAATAAGGTTAAAAC+TGG | 0.366636 | 7_2:+19933804 | Msa1051960:CDS |
| ATTGATTCTGTATATGCTTT+GGG | 0.370196 | 7_2:+19934940 | Msa1051960:CDS |
| AACACGACTGATCAAATTCC+TGG | 0.372318 | 7_2:+19935006 | Msa1051960:CDS |
| TTGAATCCGAAACCGATTAA+CGG | 0.372814 | 7_2:+19933538 | Msa1051960:five_prime_UTR |
| GATGATGATTGTGTTATTGT+TGG | 0.381049 | 7_2:+19934134 | Msa1051960:CDS |
| CGGGATTGTATAATCTTGCT+TGG | 0.382514 | 7_2:+19933913 | Msa1051960:CDS |
| GAATTTGATCAGTCGTGTTA+AGG | 0.385004 | 7_2:-19935002 | None:intergenic |
| ATTATAGACCAATCCGATAA+TGG | 0.386935 | 7_2:+19936409 | Msa1051960:CDS |
| ACTGGTGGTGGAGGTGGTGG+TGG | 0.400336 | 7_2:+19933822 | Msa1051960:CDS |
| TGGATCGAGTTTCCGGTGAT+TGG | 0.416059 | 7_2:-19933398 | None:intergenic |
| TCCCTGTGGTAGATAGATTT+GGG | 0.416784 | 7_2:+19935217 | Msa1051960:CDS |
| AATTTGATCAGTCGTGTTAA+GGG | 0.417114 | 7_2:-19935001 | None:intergenic |
| CGTTTGCTGAAACTTGTAGT+AGG | 0.420625 | 7_2:+19934351 | Msa1051960:CDS |
| AGGTGGTGGTGGTGATTCTA+GGG | 0.425836 | 7_2:+19933833 | Msa1051960:CDS |
| GCTGTTAGAAATGTTCTTGA+GGG | 0.438447 | 7_2:+19934188 | Msa1051960:CDS |
| AGATCTAAAGTACGTGCATC+AGG | 0.440445 | 7_2:-19935645 | None:intergenic |
| TTGGAGGAGGGTGAGATTGA+TGG | 0.442257 | 7_2:+19934104 | Msa1051960:CDS |
| GTTAAAACTGGTGGTGGAGG+TGG | 0.442387 | 7_2:+19933816 | Msa1051960:CDS |
| CTTTAGAACCATTATCGGAT+TGG | 0.443771 | 7_2:-19936417 | None:intergenic |
| AAAAGAGGAAGGGGAATTGG+AGG | 0.445116 | 7_2:+19934088 | Msa1051960:CDS |
| AAATCCGTTATTCGCGGTGG+TGG | 0.451185 | 7_2:-19933418 | None:intergenic |
| GATTCTAGAATTGATGCAAC+AGG | 0.451747 | 7_2:+19935558 | Msa1051960:CDS |
| TCGAGGGAAGTAGAAGAAAC+AGG | 0.452956 | 7_2:-19935510 | None:intergenic |
| AGAGGAAGGGGAATTGGAGG+AGG | 0.457569 | 7_2:+19934091 | Msa1051960:CDS |
| CTCTATGGACAATTTGCAAA+AGG | 0.458086 | 7_2:+19934602 | Msa1051960:CDS |
| ATGCATATGTTGAGTTATCA+TGG | 0.461142 | 7_2:-19935068 | None:intergenic |
| CGATCCACCACCGCGAATAA+CGG | 0.462507 | 7_2:+19933414 | Msa1051960:five_prime_UTR |
| CAATCCGATAATGGTTCTAA+AGG | 0.470907 | 7_2:+19936418 | Msa1051960:CDS |
| GAATTGATGCAACAGGTTCT+GGG | 0.478138 | 7_2:+19935565 | Msa1051960:CDS |
| CAATAATGAGGTTGTCGGTA+AGG | 0.481079 | 7_2:+19934963 | Msa1051960:CDS |
| GAAACTTGTAGTAGGATTCA+AGG | 0.482748 | 7_2:+19934359 | Msa1051960:CDS |
| AATGGTAATAGTAACAATAG+TGG | 0.485072 | 7_2:+19933999 | Msa1051960:CDS |
| GGTGAATAATAGTGATGTAA+AGG | 0.486635 | 7_2:+19933773 | Msa1051960:CDS |
| TTTCTTCTACTTCCCTCGAT+AGG | 0.490164 | 7_2:+19935514 | Msa1051960:CDS |
| CAGAGCAATGTTAAAGGAAG+AGG | 0.492187 | 7_2:+19935111 | Msa1051960:CDS |
| ATATGTCGTGGTTATGCGTC+GGG | 0.492964 | 7_2:+19933894 | Msa1051960:CDS |
| CTCGATAGGTCCAGCATGCA+TGG | 0.495756 | 7_2:+19935528 | Msa1051960:CDS |
| AGAGGCTGAGAAGATGGAAC+TGG | 0.497638 | 7_2:+19935260 | Msa1051960:CDS |
| GGGATTGTATAATCTTGCTT+GGG | 0.498081 | 7_2:+19933914 | Msa1051960:CDS |
| TAGGACAGAGGCTGAGAAGA+TGG | 0.500214 | 7_2:+19935254 | Msa1051960:CDS |
| CTAAATCATGGTCCTTATGT+AGG | 0.501720 | 7_2:-19935155 | None:intergenic |
| AACAATAGTGGGAATAAAGA+TGG | 0.503645 | 7_2:+19934011 | Msa1051960:CDS |
| TGCTGTTAGAAATGTTCTTG+AGG | 0.504409 | 7_2:+19934187 | Msa1051960:CDS |
| CAGCGAAGAGTAGAGATCCT+AGG | 0.506981 | 7_2:+19935607 | Msa1051960:CDS |
| CCCTCTGTTTGACCTACATA+AGG | 0.509616 | 7_2:+19935143 | Msa1051960:CDS |
| ATGGTAATAGTAACAATAGT+GGG | 0.517892 | 7_2:+19934000 | Msa1051960:CDS |
| AAGGTTAAAACTGGTGGTGG+AGG | 0.520180 | 7_2:+19933813 | Msa1051960:CDS |
| TTGGGCAATAATGAGGTTGT+CGG | 0.521902 | 7_2:+19934958 | Msa1051960:CDS |
| ATCAACTAATCCATGCATGC+TGG | 0.523002 | 7_2:-19935538 | None:intergenic |
| AATAAGGTTAAAACTGGTGG+TGG | 0.525836 | 7_2:+19933810 | Msa1051960:CDS |
| AGATCTAGAAGAATCCAAAT+CGG | 0.526441 | 7_2:+19933456 | Msa1051960:five_prime_UTR |
| TCAGCCTCTGTCCTAACAGC+AGG | 0.526592 | 7_2:-19935246 | None:intergenic |
| GAAGTTGAGGATGTTGAAGA+AGG | 0.526745 | 7_2:+19933681 | Msa1051960:CDS |
| ATTGGAAGAGATTACTGAAG+AGG | 0.530379 | 7_2:+19933725 | Msa1051960:CDS |
| GGAAACAGCTTTCAAAGCAT+CGG | 0.537333 | 7_2:-19935316 | None:intergenic |
| GAGGAAGGGGAATTGGAGGA+GGG | 0.538233 | 7_2:+19934092 | Msa1051960:CDS |
| TCACCTGAAGGAGTTGGACT+TGG | 0.541752 | 7_2:-19935390 | None:intergenic |
| GGAGCTTCTCGTGTGGGTGA+CGG | 0.548518 | 7_2:-19935186 | None:intergenic |
| AGAATAAGGATAATATATCC+AGG | 0.549339 | 7_2:+19934628 | Msa1051960:CDS |
| TCACAGTCACCTGAAGGAGT+TGG | 0.555464 | 7_2:-19935396 | None:intergenic |
| AACCCAAATCTATCTACCAC+AGG | 0.561411 | 7_2:-19935219 | None:intergenic |
| ACGGTAAACTGTCTAAATCA+TGG | 0.562966 | 7_2:-19935167 | None:intergenic |
| CACGATGGAGCTTCTCGTGT+GGG | 0.564877 | 7_2:-19935192 | None:intergenic |
| CTGAGAAGATGGAACTGGAT+GGG | 0.565800 | 7_2:+19935265 | Msa1051960:CDS |
| TTTGTGCAAGATTATGAAAG+GGG | 0.572891 | 7_2:+19936454 | Msa1051960:CDS |
| GTCGAAGGAGATTGTTGTAG+TGG | 0.573360 | 7_2:+19934049 | Msa1051960:CDS |
| CATGCATGCTGGACCTATCG+AGG | 0.574396 | 7_2:-19935527 | None:intergenic |
| GAATAATAGTGATGTAAAGG+TGG | 0.577737 | 7_2:+19933776 | Msa1051960:CDS |
| GCTGAGAAGATGGAACTGGA+TGG | 0.581305 | 7_2:+19935264 | Msa1051960:CDS |
| GAAACAGGAATCTGATCCAA+GGG | 0.589305 | 7_2:-19935495 | None:intergenic |
| ACACGATGGAGCTTCTCGTG+TGG | 0.589477 | 7_2:-19935193 | None:intergenic |
| AGAAACAGGAATCTGATCCA+AGG | 0.593311 | 7_2:-19935496 | None:intergenic |
| ATATGCTTTGGGCAATAATG+AGG | 0.593696 | 7_2:+19934951 | Msa1051960:CDS |
| ATTGCTCTGTCCATATTGCA+AGG | 0.597094 | 7_2:-19935097 | None:intergenic |
| GCCTCTGTCCTAACAGCAGG+AGG | 0.598478 | 7_2:-19935243 | None:intergenic |
| GGATTAATGAAACGAAGCCT+AGG | 0.600180 | 7_2:-19935624 | None:intergenic |
| GATAATAAGGTTAAAACTGG+TGG | 0.602040 | 7_2:+19933807 | Msa1051960:CDS |
| TATATGTCGTGGTTATGCGT+CGG | 0.602047 | 7_2:+19933893 | Msa1051960:CDS |
| TCTCCCTCACAGTCACCTGA+AGG | 0.602364 | 7_2:-19935402 | None:intergenic |
| TGATAACTCAACATATGCAT+CGG | 0.603113 | 7_2:+19935071 | Msa1051960:CDS |
| GGGTGTTACTGTTGCGAGTG+TGG | 0.604454 | 7_2:+19934208 | Msa1051960:CDS |
| ATGTTTGATTTCAAATCACA+AGG | 0.604876 | 7_2:-19936247 | None:intergenic |
| AACTCCTTCAGGTGACTGTG+AGG | 0.606072 | 7_2:+19935398 | Msa1051960:CDS |
| ACTCCTTCAGGTGACTGTGA+GGG | 0.608964 | 7_2:+19935399 | Msa1051960:CDS |
| GCCTCCTGCTGTTAGGACAG+AGG | 0.613975 | 7_2:+19935242 | Msa1051960:CDS |
| GATCTGAAAATTCCAATCAC+CGG | 0.615108 | 7_2:+19933386 | Msa1051960:five_prime_UTR |
| CAAGAACATTTCTAACAGCA+AGG | 0.622815 | 7_2:-19934184 | None:intergenic |
| TTGTGCAAGATTATGAAAGG+GGG | 0.625169 | 7_2:+19936455 | Msa1051960:CDS |
| AGAGCAATGTTAAAGGAAGA+GGG | 0.625657 | 7_2:+19935112 | Msa1051960:CDS |
| AGCTGTAGACACTAATGATG+AGG | 0.636188 | 7_2:+19935425 | Msa1051960:CDS |
| GAACTTAAGATGAGAAGACA+CGG | 0.637373 | 7_2:+19936502 | Msa1051960:CDS |
| ACAACAAAATCCGTTATTCG+CGG | 0.638974 | 7_2:-19933424 | None:intergenic |
| TGAAATGGGAAAAGAAGTTG+AGG | 0.639472 | 7_2:+19933668 | Msa1051960:CDS |
| TGAGTTGAATAAGTCGTCGA+AGG | 0.653035 | 7_2:+19934034 | Msa1051960:CDS |
| TTTGATTTCAAATCACAAGG+AGG | 0.660498 | 7_2:-19936244 | None:intergenic |
| AGCTCCATCGTGTTTCCCTG+TGG | 0.661651 | 7_2:+19935203 | Msa1051960:CDS |
| AAGTATCCGACTATATGTCG+TGG | 0.663879 | 7_2:+19933882 | Msa1051960:CDS |
| ATGCATGCTGGACCTATCGA+GGG | 0.667261 | 7_2:-19935526 | None:intergenic |
| GCATAACCACGACATATAGT+CGG | 0.676070 | 7_2:-19933888 | None:intergenic |
| ACAGGAATCTGATCCAAGGG+GGG | 0.676207 | 7_2:-19935492 | None:intergenic |
| TCTACCACAGGGAAACACGA+TGG | 0.684572 | 7_2:-19935207 | None:intergenic |
| CCTTATGTAGGTCAAACAGA+GGG | 0.689539 | 7_2:-19935143 | None:intergenic |
| ACAAAATCCGTTATTCGCGG+TGG | 0.691909 | 7_2:-19933421 | None:intergenic |
| ACCCAAATCTATCTACCACA+GGG | 0.692077 | 7_2:-19935218 | None:intergenic |
| TCCTTATGTAGGTCAAACAG+AGG | 0.692136 | 7_2:-19935144 | None:intergenic |
| AACTTAAGATGAGAAGACAC+GGG | 0.694065 | 7_2:+19936503 | Msa1051960:CDS |
| AACAGGAATCTGATCCAAGG+GGG | 0.704891 | 7_2:-19935493 | None:intergenic |
| AAACAGGAATCTGATCCAAG+GGG | 0.729415 | 7_2:-19935494 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGTTAATAATTAATAAATTA+GGG | - | chr7_2:19933500-19933519 | None:intergenic | 10.0% |
| !! | AGGTTAATAATTAATAAATT+AGG | - | chr7_2:19933501-19933520 | None:intergenic | 10.0% |
| !!! | AATTATTAACCTAATTTTTT+TGG | + | chr7_2:19933509-19933528 | Msa1051960:five_prime_UTR | 10.0% |
| !!! | AAATTTTCATTTTATAAACT+GGG | - | chr7_2:19934863-19934882 | None:intergenic | 10.0% |
| !!! | TAAATTTTCATTTTATAAAC+TGG | - | chr7_2:19934864-19934883 | None:intergenic | 10.0% |
| !! | AGTTTATAAAATGAAAATTT+AGG | + | chr7_2:19934863-19934882 | Msa1051960:intron | 10.0% |
| !! | TGATATATGTATATATATAT+TGG | - | chr7_2:19935837-19935856 | None:intergenic | 10.0% |
| !! | AATATATATATACATATATC+AGG | + | chr7_2:19935836-19935855 | Msa1051960:intron | 10.0% |
| !! | ATAACAAAAATATCATTCAA+AGG | - | chr7_2:19933960-19933979 | None:intergenic | 15.0% |
| !!! | TTTGAATGATATTTTTGTTA+TGG | + | chr7_2:19933959-19933978 | Msa1051960:CDS | 15.0% |
| !! | AAAAATAGTTTAGAGATATA+TGG | - | chr7_2:19934709-19934728 | None:intergenic | 15.0% |
| !!! | ATATCTCTAAACTATTTTTT+TGG | + | chr7_2:19934710-19934729 | Msa1051960:intron | 15.0% |
| !! | AAACGTAAATAAAAATATGA+TGG | - | chr7_2:19936012-19936031 | None:intergenic | 15.0% |
| !!! | AAATTTTTCAATTTCCGATT+TGG | - | chr7_2:19933473-19933492 | None:intergenic | 20.0% |
| !! | CAAAATTGACCAAAAAAATT+AGG | - | chr7_2:19933521-19933540 | None:intergenic | 20.0% |
| !! | AAACAAAAAAAACCGTTAAT+CGG | - | chr7_2:19933553-19933572 | None:intergenic | 20.0% |
| !! | AGTAAGTGAAAATTGTTTAT+GGG | + | chr7_2:19934234-19934253 | Msa1051960:intron | 20.0% |
| !!! | AATTGACTTGTGTTTTTATT+GGG | + | chr7_2:19934308-19934327 | Msa1051960:intron | 20.0% |
| !!! | TTTTTAATGCTAACTTGTTT+AGG | + | chr7_2:19934810-19934829 | Msa1051960:intron | 20.0% |
| !!! | TCAAATTTTTTGACGAAATT+TGG | + | chr7_2:19935915-19935934 | Msa1051960:intron | 20.0% |
| !!! | CAAATTTTTTGACGAAATTT+GGG | + | chr7_2:19935916-19935935 | Msa1051960:intron | 20.0% |
| !! | ATCATGTATGAATTAAAGAA+TGG | - | chr7_2:19935952-19935971 | None:intergenic | 20.0% |
| !!! | TGATTGGTAGTTTTTTTTTT+AGG | + | chr7_2:19936079-19936098 | Msa1051960:intron | 20.0% |
| !!! | GATTGGTAGTTTTTTTTTTA+GGG | + | chr7_2:19936080-19936099 | Msa1051960:intron | 20.0% |
| !! | TAACTACAAATACATCATAA+AGG | - | chr7_2:19936216-19936235 | None:intergenic | 20.0% |
| !! | TTATGATGTATTTGTAGTTA+TGG | + | chr7_2:19936216-19936235 | Msa1051960:intron | 20.0% |
| !! | GGTTAATTATTCATGGTTTT+TGG | + | chr7_2:19933609-19933628 | Msa1051960:exon | 25.0% |
| ! | TTCGAAGAATTTGATTGAAA+TGG | + | chr7_2:19933653-19933672 | Msa1051960:CDS | 25.0% |
| ! | TCGAAGAATTTGATTGAAAT+GGG | + | chr7_2:19933654-19933673 | Msa1051960:CDS | 25.0% |
| ! | AGTGATAATAAGGTTAAAAC+TGG | + | chr7_2:19933804-19933823 | Msa1051960:CDS | 25.0% |
| ! | GAACTTGATAAAAATGCTAA+TGG | + | chr7_2:19933981-19934000 | Msa1051960:CDS | 25.0% |
| ! | AATGGTAATAGTAACAATAG+TGG | + | chr7_2:19933999-19934018 | Msa1051960:CDS | 25.0% |
| ! | ATGGTAATAGTAACAATAGT+GGG | + | chr7_2:19934000-19934019 | Msa1051960:CDS | 25.0% |
| !!! | TGAGAATTTTTCAAATTCTG+AGG | + | chr7_2:19934160-19934179 | Msa1051960:CDS | 25.0% |
| ! | GAGTAAGTGAAAATTGTTTA+TGG | + | chr7_2:19934233-19934252 | Msa1051960:intron | 25.0% |
| !!! | GAATTGACTTGTGTTTTTAT+TGG | + | chr7_2:19934307-19934326 | Msa1051960:intron | 25.0% |
| ! | AACAAATAATGATCTCTTAG+GGG | - | chr7_2:19934503-19934522 | None:intergenic | 25.0% |
| ! | CAACAAATAATGATCTCTTA+GGG | - | chr7_2:19934504-19934523 | None:intergenic | 25.0% |
| !!! | CACTTTTTGATGTATCATTT+TGG | + | chr7_2:19934524-19934543 | Msa1051960:intron | 25.0% |
| ! | AGAATAAGGATAATATATCC+AGG | + | chr7_2:19934628-19934647 | Msa1051960:CDS | 25.0% |
| !!! | GAACTAATGTTTTTAAAACC+TGG | - | chr7_2:19934649-19934668 | None:intergenic | 25.0% |
| !! | TAGTTTGTAATTCTTTCTAG+TGG | + | chr7_2:19934678-19934697 | Msa1051960:intron | 25.0% |
| ! | GAACGAACATTTATTTACTA+TGG | + | chr7_2:19934769-19934788 | Msa1051960:CDS | 25.0% |
| !! | AATTGATTCTGTATATGCTT+TGG | + | chr7_2:19934939-19934958 | Msa1051960:CDS | 25.0% |
| !! | ATTGATTCTGTATATGCTTT+GGG | + | chr7_2:19934940-19934959 | Msa1051960:CDS | 25.0% |
| ! | TTAGATCTTAACCAATCTTT+AGG | + | chr7_2:19935660-19935679 | Msa1051960:intron | 25.0% |
| ! | TAGATCTTAACCAATCTTTA+GGG | + | chr7_2:19935661-19935680 | Msa1051960:intron | 25.0% |
| ! | NNNNNTTTGTCCCTAAAGAT+TGG | - | chr7_2:19935674-19935693 | None:intergenic | 25.0% |
| ! | TCGTCAAAAAATTTGAACTT+CGG | - | chr7_2:19935911-19935930 | None:intergenic | 25.0% |
| ! | GTTAGCATATAATATGTGAT+TGG | + | chr7_2:19936063-19936082 | Msa1051960:intron | 25.0% |
| !!! | TTTTTTTAGGGAAATGTGAT+TGG | + | chr7_2:19936092-19936111 | Msa1051960:intron | 25.0% |
| ! | TTCTTGCATTTCCTATTATA+TGG | + | chr7_2:19936160-19936179 | Msa1051960:intron | 25.0% |
| ! | CCTAAATACTTCCATATAAT+AGG | - | chr7_2:19936174-19936193 | None:intergenic | 25.0% |
| !!! | CCTATTATATGGAAGTATTT+AGG | + | chr7_2:19936171-19936190 | Msa1051960:intron | 25.0% |
| !! | ATGTTTGATTTCAAATCACA+AGG | - | chr7_2:19936250-19936269 | None:intergenic | 25.0% |
| ! | TCATAATCTTGCACAAAAAA+TGG | - | chr7_2:19936451-19936470 | None:intergenic | 25.0% |
| !! | TTTTTGTGCAAGATTATGAA+AGG | + | chr7_2:19936452-19936471 | Msa1051960:CDS | 25.0% |
| !! | TTTTGTGCAAGATTATGAAA+GGG | + | chr7_2:19936453-19936472 | Msa1051960:CDS | 25.0% |
| !!! | ACGTTCGCAATTTTTTTCAT+CGG | + | chr7_2:19933364-19933383 | Msa1051960:five_prime_UTR | 30.0% |
| AGATCTAGAAGAATCCAAAT+CGG | + | chr7_2:19933456-19933475 | Msa1051960:five_prime_UTR | 30.0% | |
| ! | AAAAAACCGTTAATCGGTTT+CGG | - | chr7_2:19933547-19933566 | None:intergenic | 30.0% |
| !!! | GATTTGTTTTTTTCGTTGTG+TGG | + | chr7_2:19933588-19933607 | Msa1051960:five_prime_UTR | 30.0% |
| GTTGTGTGGTTAATTATTCA+TGG | + | chr7_2:19933602-19933621 | Msa1051960:exon | 30.0% | |
| TACTGAAGAGGATTTCAAAA+AGG | + | chr7_2:19933737-19933756 | Msa1051960:CDS | 30.0% | |
| ACTGAAGAGGATTTCAAAAA+GGG | + | chr7_2:19933738-19933757 | Msa1051960:CDS | 30.0% | |
| GGTGAATAATAGTGATGTAA+AGG | + | chr7_2:19933773-19933792 | Msa1051960:CDS | 30.0% | |
| GAATAATAGTGATGTAAAGG+TGG | + | chr7_2:19933776-19933795 | Msa1051960:CDS | 30.0% | |
| GGTGGATAAAAGTGATAATA+AGG | + | chr7_2:19933794-19933813 | Msa1051960:CDS | 30.0% | |
| GATAATAAGGTTAAAACTGG+TGG | + | chr7_2:19933807-19933826 | Msa1051960:CDS | 30.0% | |
| ! | AACAATAGTGGGAATAAAGA+TGG | + | chr7_2:19934011-19934030 | Msa1051960:CDS | 30.0% |
| ! | TGATGATGATGATGAAAAAG+AGG | + | chr7_2:19934073-19934092 | Msa1051960:CDS | 30.0% |
| ! | ATGATGATGAAAAAGAGGAA+GGG | + | chr7_2:19934078-19934097 | Msa1051960:CDS | 30.0% |
| ! | GATGATGATTGTGTTATTGT+TGG | + | chr7_2:19934134-19934153 | Msa1051960:CDS | 30.0% |
| !! | CAGAGCAAAGTGTTTTTATT+GGG | + | chr7_2:19934389-19934408 | Msa1051960:CDS | 30.0% |
| GCAACAAATAATGATCTCTT+AGG | - | chr7_2:19934505-19934524 | None:intergenic | 30.0% | |
| ! | TTTATTCTGTGTGTCATTGT+AGG | + | chr7_2:19934572-19934591 | Msa1051960:intron | 30.0% |
| TTTGCAAAAGGAAGAGAATA+AGG | + | chr7_2:19934614-19934633 | Msa1051960:CDS | 30.0% | |
| TACTATGGAGCATATGAAAA+AGG | + | chr7_2:19934784-19934803 | Msa1051960:CDS | 30.0% | |
| ATAAACTGGGCATTAAATGA+AGG | - | chr7_2:19934850-19934869 | None:intergenic | 30.0% | |
| !!! | ATGCTTTTTTGTACAGATTC+AGG | + | chr7_2:19934903-19934922 | Msa1051960:intron | 30.0% |
| AATTTGATCAGTCGTGTTAA+GGG | - | chr7_2:19935004-19935023 | None:intergenic | 30.0% | |
| ATGCATATGTTGAGTTATCA+TGG | - | chr7_2:19935071-19935090 | None:intergenic | 30.0% | |
| TGATAACTCAACATATGCAT+CGG | + | chr7_2:19935071-19935090 | Msa1051960:CDS | 30.0% | |
| ! | ACTGAACTTTTGTTGATATG+TGG | - | chr7_2:19935340-19935359 | None:intergenic | 30.0% |
| TATATATATATTGGACCGAC+TGG | - | chr7_2:19935828-19935847 | None:intergenic | 30.0% | |
| CAAAAAATTTGAACTTCGGA+AGG | - | chr7_2:19935907-19935926 | None:intergenic | 30.0% | |
| ! | TTTGATTTCAAATCACAAGG+AGG | - | chr7_2:19936247-19936266 | None:intergenic | 30.0% |
| ACTTCACATTGCTAAATTAG+AGG | + | chr7_2:19936276-19936295 | Msa1051960:CDS | 30.0% | |
| TGTGTTTGTATGACATATCA+AGG | + | chr7_2:19936372-19936391 | Msa1051960:intron | 30.0% | |
| TTTGTATGACATATCAAGGT+AGG | + | chr7_2:19936376-19936395 | Msa1051960:intron | 30.0% | |
| ATTATAGACCAATCCGATAA+TGG | + | chr7_2:19936409-19936428 | Msa1051960:CDS | 30.0% | |
| !! | TCTTCCTTTAGAACCATTAT+CGG | - | chr7_2:19936425-19936444 | None:intergenic | 30.0% |
| TTTGTGCAAGATTATGAAAG+GGG | + | chr7_2:19936454-19936473 | Msa1051960:CDS | 30.0% | |
| GATCTGAAAATTCCAATCAC+CGG | + | chr7_2:19933386-19933405 | Msa1051960:five_prime_UTR | 35.0% | |
| ACAACAAAATCCGTTATTCG+CGG | - | chr7_2:19933427-19933446 | None:intergenic | 35.0% | |
| TTGAATCCGAAACCGATTAA+CGG | + | chr7_2:19933538-19933557 | Msa1051960:five_prime_UTR | 35.0% | |
| !! | CATGGTTTTTGGATCGTTAT+TGG | + | chr7_2:19933620-19933639 | Msa1051960:exon | 35.0% |
| TGAAATGGGAAAAGAAGTTG+AGG | + | chr7_2:19933668-19933687 | Msa1051960:CDS | 35.0% | |
| GATTTCTGATTCTGCTTCAT+TGG | + | chr7_2:19933707-19933726 | Msa1051960:CDS | 35.0% | |
| ATTGGAAGAGATTACTGAAG+AGG | + | chr7_2:19933725-19933744 | Msa1051960:CDS | 35.0% | |
| ! | CAAAAAGGGTGATGATGTTA+AGG | + | chr7_2:19933752-19933771 | Msa1051960:CDS | 35.0% |
| AATAAGGTTAAAACTGGTGG+TGG | + | chr7_2:19933810-19933829 | Msa1051960:CDS | 35.0% | |
| GGGATTGTATAATCTTGCTT+GGG | + | chr7_2:19933914-19933933 | Msa1051960:CDS | 35.0% | |
| ! | GATGATGATGAAAAAGAGGA+AGG | + | chr7_2:19934077-19934096 | Msa1051960:CDS | 35.0% |
| ! | TGATGATGAAAAAGAGGAAG+GGG | + | chr7_2:19934079-19934098 | Msa1051960:CDS | 35.0% |
| CAAGAACATTTCTAACAGCA+AGG | - | chr7_2:19934187-19934206 | None:intergenic | 35.0% | |
| TGCTGTTAGAAATGTTCTTG+AGG | + | chr7_2:19934187-19934206 | Msa1051960:CDS | 35.0% | |
| GCTGTTAGAAATGTTCTTGA+GGG | + | chr7_2:19934188-19934207 | Msa1051960:CDS | 35.0% | |
| GAAACTTGTAGTAGGATTCA+AGG | + | chr7_2:19934359-19934378 | Msa1051960:CDS | 35.0% | |
| TAAAAACACTTTGCTCTGCA+AGG | - | chr7_2:19934387-19934406 | None:intergenic | 35.0% | |
| !! | GCAGAGCAAAGTGTTTTTAT+TGG | + | chr7_2:19934388-19934407 | Msa1051960:CDS | 35.0% |
| CTCTATGGACAATTTGCAAA+AGG | + | chr7_2:19934602-19934621 | Msa1051960:CDS | 35.0% | |
| TGGGCATTAAATGAAGGAAT+GGG | - | chr7_2:19934844-19934863 | None:intergenic | 35.0% | |
| ! | ATATGCTTTGGGCAATAATG+AGG | + | chr7_2:19934951-19934970 | Msa1051960:CDS | 35.0% |
| GAATTTGATCAGTCGTGTTA+AGG | - | chr7_2:19935005-19935024 | None:intergenic | 35.0% | |
| ! | TACTCATCAGCTTTTAAACC+AGG | - | chr7_2:19935027-19935046 | None:intergenic | 35.0% |
| GCTGATGAGTATATTTCTTC+TGG | + | chr7_2:19935036-19935055 | Msa1051960:CDS | 35.0% | |
| TATGGACAGAGCAATGTTAA+AGG | + | chr7_2:19935105-19935124 | Msa1051960:CDS | 35.0% | |
| AGAGCAATGTTAAAGGAAGA+GGG | + | chr7_2:19935112-19935131 | Msa1051960:CDS | 35.0% | |
| CTAAATCATGGTCCTTATGT+AGG | - | chr7_2:19935158-19935177 | None:intergenic | 35.0% | |
| ACGGTAAACTGTCTAAATCA+TGG | - | chr7_2:19935170-19935189 | None:intergenic | 35.0% | |
| !! | GATTCTAGAATTGATGCAAC+AGG | + | chr7_2:19935558-19935577 | Msa1051960:CDS | 35.0% |
| !! | CTTTAGAACCATTATCGGAT+TGG | - | chr7_2:19936420-19936439 | None:intergenic | 35.0% |
| !! | CAATCCGATAATGGTTCTAA+AGG | + | chr7_2:19936418-19936437 | Msa1051960:CDS | 35.0% |
| TTGTGCAAGATTATGAAAGG+GGG | + | chr7_2:19936455-19936474 | Msa1051960:CDS | 35.0% | |
| GAACTTAAGATGAGAAGACA+CGG | + | chr7_2:19936502-19936521 | Msa1051960:CDS | 35.0% | |
| AACTTAAGATGAGAAGACAC+GGG | + | chr7_2:19936503-19936522 | Msa1051960:CDS | 35.0% | |
| GAAGTTGAGGATGTTGAAGA+AGG | + | chr7_2:19933681-19933700 | Msa1051960:CDS | 40.0% | |
| AAGTATCCGACTATATGTCG+TGG | + | chr7_2:19933882-19933901 | Msa1051960:CDS | 40.0% | |
| GCATAACCACGACATATAGT+CGG | - | chr7_2:19933891-19933910 | None:intergenic | 40.0% | |
| TATATGTCGTGGTTATGCGT+CGG | + | chr7_2:19933893-19933912 | Msa1051960:CDS | 40.0% | |
| CGGGATTGTATAATCTTGCT+TGG | + | chr7_2:19933913-19933932 | Msa1051960:CDS | 40.0% | |
| ! | TGAGTTGAATAAGTCGTCGA+AGG | + | chr7_2:19934034-19934053 | Msa1051960:CDS | 40.0% |
| TGAAAAAGAGGAAGGGGAAT+TGG | + | chr7_2:19934085-19934104 | Msa1051960:CDS | 40.0% | |
| ! | TTTTGTTGAACTGCTGACGT+TGG | + | chr7_2:19934259-19934278 | Msa1051960:intron | 40.0% |
| ! | CGTTTGCTGAAACTTGTAGT+AGG | + | chr7_2:19934351-19934370 | Msa1051960:CDS | 40.0% |
| ATTGTAGGTGTTCTGCTCTA+TGG | + | chr7_2:19934587-19934606 | Msa1051960:intron | 40.0% | |
| GGGCATTAAATGAAGGAATG+GGG | - | chr7_2:19934843-19934862 | None:intergenic | 40.0% | |
| CTGGGCATTAAATGAAGGAA+TGG | - | chr7_2:19934845-19934864 | None:intergenic | 40.0% | |
| TTGGGCAATAATGAGGTTGT+CGG | + | chr7_2:19934958-19934977 | Msa1051960:CDS | 40.0% | |
| CAATAATGAGGTTGTCGGTA+AGG | + | chr7_2:19934963-19934982 | Msa1051960:CDS | 40.0% | |
| TGTCGGTAAGGAAGAAAAAG+TGG | + | chr7_2:19934975-19934994 | Msa1051960:CDS | 40.0% | |
| AACACGACTGATCAAATTCC+TGG | + | chr7_2:19935006-19935025 | Msa1051960:CDS | 40.0% | |
| ATTGCTCTGTCCATATTGCA+AGG | - | chr7_2:19935100-19935119 | None:intergenic | 40.0% | |
| CAGAGCAATGTTAAAGGAAG+AGG | + | chr7_2:19935111-19935130 | Msa1051960:CDS | 40.0% | |
| CCTTATGTAGGTCAAACAGA+GGG | - | chr7_2:19935146-19935165 | None:intergenic | 40.0% | |
| TCCTTATGTAGGTCAAACAG+AGG | - | chr7_2:19935147-19935166 | None:intergenic | 40.0% | |
| TTCCCTGTGGTAGATAGATT+TGG | + | chr7_2:19935216-19935235 | Msa1051960:CDS | 40.0% | |
| TCCCTGTGGTAGATAGATTT+GGG | + | chr7_2:19935217-19935236 | Msa1051960:CDS | 40.0% | |
| ACCCAAATCTATCTACCACA+GGG | - | chr7_2:19935221-19935240 | None:intergenic | 40.0% | |
| AACCCAAATCTATCTACCAC+AGG | - | chr7_2:19935222-19935241 | None:intergenic | 40.0% | |
| GGAAACAGCTTTCAAAGCAT+CGG | - | chr7_2:19935319-19935338 | None:intergenic | 40.0% | |
| AGCTGTAGACACTAATGATG+AGG | + | chr7_2:19935425-19935444 | Msa1051960:CDS | 40.0% | |
| AAACAGGAATCTGATCCAAG+GGG | - | chr7_2:19935497-19935516 | None:intergenic | 40.0% | |
| GAAACAGGAATCTGATCCAA+GGG | - | chr7_2:19935498-19935517 | None:intergenic | 40.0% | |
| AGAAACAGGAATCTGATCCA+AGG | - | chr7_2:19935499-19935518 | None:intergenic | 40.0% | |
| TTTCTTCTACTTCCCTCGAT+AGG | + | chr7_2:19935514-19935533 | Msa1051960:CDS | 40.0% | |
| ATCAACTAATCCATGCATGC+TGG | - | chr7_2:19935541-19935560 | None:intergenic | 40.0% | |
| AGAATTGATGCAACAGGTTC+TGG | + | chr7_2:19935564-19935583 | Msa1051960:CDS | 40.0% | |
| GAATTGATGCAACAGGTTCT+GGG | + | chr7_2:19935565-19935584 | Msa1051960:CDS | 40.0% | |
| ! | TCTTCGCTGAACTTTTCACT+GGG | - | chr7_2:19935596-19935615 | None:intergenic | 40.0% |
| GGATTAATGAAACGAAGCCT+AGG | - | chr7_2:19935627-19935646 | None:intergenic | 40.0% | |
| ! | AGATCTAAAGTACGTGCATC+AGG | - | chr7_2:19935648-19935667 | None:intergenic | 40.0% |
| ATCAGAAGTTACGTTCCAGT+CGG | + | chr7_2:19935810-19935829 | Msa1051960:intron | 40.0% | |
| ACAAAATCCGTTATTCGCGG+TGG | - | chr7_2:19933424-19933443 | None:intergenic | 45.0% | |
| !! | AAGGTTAAAACTGGTGGTGG+AGG | + | chr7_2:19933813-19933832 | Msa1051960:CDS | 45.0% |
| !! | TGGTGGTGATTCTAGGGTTT+GGG | + | chr7_2:19933839-19933858 | Msa1051960:CDS | 45.0% |
| ATATGTCGTGGTTATGCGTC+GGG | + | chr7_2:19933894-19933913 | Msa1051960:CDS | 45.0% | |
| GTCGAAGGAGATTGTTGTAG+TGG | + | chr7_2:19934049-19934068 | Msa1051960:CDS | 45.0% | |
| AAAAGAGGAAGGGGAATTGG+AGG | + | chr7_2:19934088-19934107 | Msa1051960:CDS | 45.0% | |
| CGGTAAGGAAGAAAAAGTGG+AGG | + | chr7_2:19934978-19934997 | Msa1051960:CDS | 45.0% | |
| CCCTCTGTTTGACCTACATA+AGG | + | chr7_2:19935143-19935162 | Msa1051960:CDS | 45.0% | |
| CTGAGAAGATGGAACTGGAT+GGG | + | chr7_2:19935265-19935284 | Msa1051960:CDS | 45.0% | |
| TTTCCAAGTCCAACTCCTTC+AGG | + | chr7_2:19935387-19935406 | Msa1051960:CDS | 45.0% | |
| AACAGGAATCTGATCCAAGG+GGG | - | chr7_2:19935496-19935515 | None:intergenic | 45.0% | |
| TCGAGGGAAGTAGAAGAAAC+AGG | - | chr7_2:19935513-19935532 | None:intergenic | 45.0% | |
| ! | CTCTTCGCTGAACTTTTCAC+TGG | - | chr7_2:19935597-19935616 | None:intergenic | 45.0% |
| TGCAAGATTATGAAAGGGGG+TGG | + | chr7_2:19936458-19936477 | Msa1051960:CDS | 45.0% | |
| TGGATCGAGTTTCCGGTGAT+TGG | - | chr7_2:19933401-19933420 | None:intergenic | 50.0% | |
| AAATCCGTTATTCGCGGTGG+TGG | - | chr7_2:19933421-19933440 | None:intergenic | 50.0% | |
| !! | GTTAAAACTGGTGGTGGAGG+TGG | + | chr7_2:19933816-19933835 | Msa1051960:CDS | 50.0% |
| !! | AGGTGGTGGTGGTGATTCTA+GGG | + | chr7_2:19933833-19933852 | Msa1051960:CDS | 50.0% |
| !! | GTGGTGGTGATTCTAGGGTT+TGG | + | chr7_2:19933838-19933857 | Msa1051960:CDS | 50.0% |
| !! | TTCTAGGGTTTGGGCTGTTC+AGG | + | chr7_2:19933848-19933867 | Msa1051960:CDS | 50.0% |
| TTGGAGGAGGGTGAGATTGA+TGG | + | chr7_2:19934104-19934123 | Msa1051960:CDS | 50.0% | |
| GCATCGGAAGCCTTGCAATA+TGG | + | chr7_2:19935087-19935106 | Msa1051960:CDS | 50.0% | |
| TCTACCACAGGGAAACACGA+TGG | - | chr7_2:19935210-19935229 | None:intergenic | 50.0% | |
| TAGGACAGAGGCTGAGAAGA+TGG | + | chr7_2:19935254-19935273 | Msa1051960:CDS | 50.0% | |
| AGAGGCTGAGAAGATGGAAC+TGG | + | chr7_2:19935260-19935279 | Msa1051960:CDS | 50.0% | |
| GCTGAGAAGATGGAACTGGA+TGG | + | chr7_2:19935264-19935283 | Msa1051960:CDS | 50.0% | |
| TCACCTGAAGGAGTTGGACT+TGG | - | chr7_2:19935393-19935412 | None:intergenic | 50.0% | |
| TCACAGTCACCTGAAGGAGT+TGG | - | chr7_2:19935399-19935418 | None:intergenic | 50.0% | |
| AACTCCTTCAGGTGACTGTG+AGG | + | chr7_2:19935398-19935417 | Msa1051960:CDS | 50.0% | |
| ACTCCTTCAGGTGACTGTGA+GGG | + | chr7_2:19935399-19935418 | Msa1051960:CDS | 50.0% | |
| ACAGGAATCTGATCCAAGGG+GGG | - | chr7_2:19935495-19935514 | None:intergenic | 50.0% | |
| ATGCATGCTGGACCTATCGA+GGG | - | chr7_2:19935529-19935548 | None:intergenic | 50.0% | |
| CAGCGAAGAGTAGAGATCCT+AGG | + | chr7_2:19935607-19935626 | Msa1051960:CDS | 50.0% | |
| CGATCCACCACCGCGAATAA+CGG | + | chr7_2:19933414-19933433 | Msa1051960:five_prime_UTR | 55.0% | |
| !! | AAAACTGGTGGTGGAGGTGG+TGG | + | chr7_2:19933819-19933838 | Msa1051960:CDS | 55.0% |
| !! | GAGGTGGTGGTGGTGATTCT+AGG | + | chr7_2:19933832-19933851 | Msa1051960:CDS | 55.0% |
| AGAGGAAGGGGAATTGGAGG+AGG | + | chr7_2:19934091-19934110 | Msa1051960:CDS | 55.0% | |
| GAGGAAGGGGAATTGGAGGA+GGG | + | chr7_2:19934092-19934111 | Msa1051960:CDS | 55.0% | |
| !! | GGGTGTTACTGTTGCGAGTG+TGG | + | chr7_2:19934208-19934227 | Msa1051960:CDS | 55.0% |
| CACGATGGAGCTTCTCGTGT+GGG | - | chr7_2:19935195-19935214 | None:intergenic | 55.0% | |
| ACACGATGGAGCTTCTCGTG+TGG | - | chr7_2:19935196-19935215 | None:intergenic | 55.0% | |
| AGCTCCATCGTGTTTCCCTG+TGG | + | chr7_2:19935203-19935222 | Msa1051960:CDS | 55.0% | |
| ! | TTGGGTTGCCTCCTGCTGTT+AGG | + | chr7_2:19935235-19935254 | Msa1051960:CDS | 55.0% |
| TCAGCCTCTGTCCTAACAGC+AGG | - | chr7_2:19935249-19935268 | None:intergenic | 55.0% | |
| TCTCCCTCACAGTCACCTGA+AGG | - | chr7_2:19935405-19935424 | None:intergenic | 55.0% | |
| !! | AAGCTTTAAGCCACCCCCCT+TGG | + | chr7_2:19935479-19935498 | Msa1051960:CDS | 55.0% |
| CATGCATGCTGGACCTATCG+AGG | - | chr7_2:19935530-19935549 | None:intergenic | 55.0% | |
| CTCGATAGGTCCAGCATGCA+TGG | + | chr7_2:19935528-19935547 | Msa1051960:CDS | 55.0% | |
| !! | GCGGTGGTGGATCGAGTTTC+CGG | - | chr7_2:19933408-19933427 | None:intergenic | 60.0% |
| GGAGCTTCTCGTGTGGGTGA+CGG | - | chr7_2:19935189-19935208 | None:intergenic | 60.0% | |
| GCCTCCTGCTGTTAGGACAG+AGG | + | chr7_2:19935242-19935261 | Msa1051960:CDS | 60.0% | |
| GCCTCTGTCCTAACAGCAGG+AGG | - | chr7_2:19935246-19935265 | None:intergenic | 60.0% | |
| GGAATCTGATCCAAGGGGGG+TGG | - | chr7_2:19935492-19935511 | None:intergenic | 60.0% | |
| !! | ACTGGTGGTGGAGGTGGTGG+TGG | + | chr7_2:19933822-19933841 | Msa1051960:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 19933316 | 19936531 | 19933316 | ID=Msa1051960;Name=Msa1051960 |
| chr7_2 | mRNA | 19933316 | 19936531 | 19933316 | ID=Msa1051960-mRNA-1;Parent=Msa1051960;Name=Msa1051960-mRNA-1;_AED=0.08;_eAED=0.08;_QI=305|0.66|0.57|0.71|1|1|7|0|602 |
| chr7_2 | exon | 19933316 | 19934234 | 19933316 | ID=Msa1051960-mRNA-1:exon:4357;Parent=Msa1051960-mRNA-1 |
| chr7_2 | exon | 19934349 | 19934493 | 19934349 | ID=Msa1051960-mRNA-1:exon:4358;Parent=Msa1051960-mRNA-1 |
| chr7_2 | exon | 19934594 | 19934649 | 19934594 | ID=Msa1051960-mRNA-1:exon:4359;Parent=Msa1051960-mRNA-1 |
| chr7_2 | exon | 19934751 | 19934805 | 19934751 | ID=Msa1051960-mRNA-1:exon:4360;Parent=Msa1051960-mRNA-1 |
| chr7_2 | exon | 19934919 | 19935654 | 19934919 | ID=Msa1051960-mRNA-1:exon:4361;Parent=Msa1051960-mRNA-1 |
| chr7_2 | exon | 19936233 | 19936297 | 19936233 | ID=Msa1051960-mRNA-1:exon:4362;Parent=Msa1051960-mRNA-1 |
| chr7_2 | exon | 19936394 | 19936531 | 19936394 | ID=Msa1051960-mRNA-1:exon:4363;Parent=Msa1051960-mRNA-1 |
| chr7_2 | five_prime_UTR | 19933316 | 19933620 | 19933316 | ID=Msa1051960-mRNA-1:five_prime_utr;Parent=Msa1051960-mRNA-1 |
| chr7_2 | CDS | 19933621 | 19934234 | 19933621 | ID=Msa1051960-mRNA-1:cds;Parent=Msa1051960-mRNA-1 |
| chr7_2 | CDS | 19934349 | 19934493 | 19934349 | ID=Msa1051960-mRNA-1:cds;Parent=Msa1051960-mRNA-1 |
| chr7_2 | CDS | 19934594 | 19934649 | 19934594 | ID=Msa1051960-mRNA-1:cds;Parent=Msa1051960-mRNA-1 |
| chr7_2 | CDS | 19934751 | 19934805 | 19934751 | ID=Msa1051960-mRNA-1:cds;Parent=Msa1051960-mRNA-1 |
| chr7_2 | CDS | 19934919 | 19935654 | 19934919 | ID=Msa1051960-mRNA-1:cds;Parent=Msa1051960-mRNA-1 |
| chr7_2 | CDS | 19936233 | 19936297 | 19936233 | ID=Msa1051960-mRNA-1:cds;Parent=Msa1051960-mRNA-1 |
| chr7_2 | CDS | 19936394 | 19936531 | 19936394 | ID=Msa1051960-mRNA-1:cds;Parent=Msa1051960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
