Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217670 | XP_013458250.1 | 46.094 | 128 | 69 | 0 | 253 | 380 | 81 | 208 | 7.43e-25 | 118 |
| Msa1217670 | XP_013458250.1 | 86.731 | 309 | 23 | 5 | 1 | 300 | 1 | 300 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217670 | sp|Q5ZC88|CUL1_ORYSJ | 82.540 | 252 | 44 | 0 | 1 | 252 | 1 | 252 | 4.65e-152 | 449 |
| Msa1217670 | sp|Q5ZC88|CUL1_ORYSJ | 44.186 | 129 | 72 | 0 | 253 | 381 | 81 | 209 | 1.57e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa1217670 | 0.821082 | 4.878859e-53 | -8.615850e-47 |
| Msa0014600 | Msa1217670 | 0.802458 | 5.557220e-49 | -8.615850e-47 |
| Msa0014890 | Msa1217670 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa0034180 | Msa1217670 | 0.806479 | 8.062097e-50 | -8.615850e-47 |
| Msa0047640 | Msa1217670 | 0.819947 | 8.887752e-53 | -8.615850e-47 |
| Msa0054820 | Msa1217670 | 0.813728 | 2.210347e-51 | -8.615850e-47 |
| Msa0064920 | Msa1217670 | 0.863210 | 2.928044e-64 | -8.615850e-47 |
| Msa0080250 | Msa1217670 | 0.800750 | 1.244757e-48 | -8.615850e-47 |
| Msa0084340 | Msa1217670 | 0.819898 | 9.120636e-53 | -8.615850e-47 |
| Msa0091780 | Msa1217670 | 0.814149 | 1.784182e-51 | -8.615850e-47 |
| Msa0092440 | Msa1217670 | 0.810864 | 9.326120e-51 | -8.615850e-47 |
| Msa0116270 | Msa1217670 | 0.833884 | 4.126507e-56 | -8.615850e-47 |
| Msa0608270 | Msa1217670 | 0.802799 | 4.725551e-49 | -8.615850e-47 |
| Msa0615060 | Msa1217670 | 0.801229 | 9.937627e-49 | -8.615850e-47 |
| Msa0646330 | Msa1217670 | 0.812793 | 3.545322e-51 | -8.615850e-47 |
| Msa0646400 | Msa1217670 | 0.806027 | 1.003903e-49 | -8.615850e-47 |
| Msa0648830 | Msa1217670 | 0.807900 | 4.032213e-50 | -8.615850e-47 |
| Msa0687450 | Msa1217670 | 0.833696 | 4.597251e-56 | -8.615850e-47 |
| Msa0689760 | Msa1217670 | 0.853385 | 2.474172e-61 | -8.615850e-47 |
| Msa0691340 | Msa1217670 | 0.873964 | 9.776432e-68 | -8.615850e-47 |
| Msa0716860 | Msa1217670 | 0.845048 | 5.178361e-59 | -8.615850e-47 |
| Msa0749400 | Msa1217670 | 0.828075 | 1.099853e-54 | -8.615850e-47 |
| Msa0757800 | Msa1217670 | 0.804127 | 2.507885e-49 | -8.615850e-47 |
| Msa0760770 | Msa1217670 | 0.850187 | 1.997404e-60 | -8.615850e-47 |
| Msa0780280 | Msa1217670 | 0.850938 | 1.228142e-60 | -8.615850e-47 |
| Msa0789560 | Msa1217670 | 0.823493 | 1.344658e-53 | -8.615850e-47 |
| Msa0800700 | Msa1217670 | 0.806204 | 9.216779e-50 | -8.615850e-47 |
| Msa0821800 | Msa1217670 | 0.824516 | 7.737147e-54 | -8.615850e-47 |
| Msa0126230 | Msa1217670 | 0.841333 | 5.062727e-58 | -8.615850e-47 |
| Msa0128180 | Msa1217670 | 0.815589 | 8.555851e-52 | -8.615850e-47 |
| Msa0137540 | Msa1217670 | 0.844363 | 7.921185e-59 | -8.615850e-47 |
| Msa0138210 | Msa1217670 | 0.848808 | 4.838849e-60 | -8.615850e-47 |
| Msa0143850 | Msa1217670 | 0.802073 | 6.670989e-49 | -8.615850e-47 |
| Msa0174360 | Msa1217670 | 0.843494 | 1.354103e-58 | -8.615850e-47 |
| Msa0177170 | Msa1217670 | 0.821656 | 3.595732e-53 | -8.615850e-47 |
| Msa0183420 | Msa1217670 | 0.802327 | 5.913437e-49 | -8.615850e-47 |
| Msa0194860 | Msa1217670 | 0.815230 | 1.028274e-51 | -8.615850e-47 |
| Msa0377440 | Msa1217670 | 0.802996 | 4.303892e-49 | -8.615850e-47 |
| Msa0379610 | Msa1217670 | 0.821565 | 3.773504e-53 | -8.615850e-47 |
| Msa0395980 | Msa1217670 | 0.809918 | 1.492291e-50 | -8.615850e-47 |
| Msa0417650 | Msa1217670 | 0.818649 | 1.755516e-52 | -8.615850e-47 |
| Msa0417730 | Msa1217670 | 0.807297 | 5.415356e-50 | -8.615850e-47 |
| Msa0423840 | Msa1217670 | 0.862518 | 4.789665e-64 | -8.615850e-47 |
| Msa0450360 | Msa1217670 | 0.804085 | 2.558005e-49 | -8.615850e-47 |
| Msa0983770 | Msa1217670 | 0.830925 | 2.230845e-55 | -8.615850e-47 |
| Msa0996020 | Msa1217670 | 0.831657 | 1.474100e-55 | -8.615850e-47 |
| Msa1020940 | Msa1217670 | 0.807332 | 5.322829e-50 | -8.615850e-47 |
| Msa1036740 | Msa1217670 | 0.812332 | 4.471437e-51 | -8.615850e-47 |
| Msa1051960 | Msa1217670 | 0.813000 | 3.194491e-51 | -8.615850e-47 |
| Msa1067140 | Msa1217670 | 0.835871 | 1.303444e-56 | -8.615850e-47 |
| Msa1072600 | Msa1217670 | 0.820782 | 5.718756e-53 | -8.615850e-47 |
| Msa1095790 | Msa1217670 | 0.890916 | 6.389620e-74 | -8.615850e-47 |
| Msa0240650 | Msa1217670 | 0.842376 | 2.684847e-58 | -8.615850e-47 |
| Msa0263680 | Msa1217670 | 0.823043 | 1.713015e-53 | -8.615850e-47 |
| Msa0269520 | Msa1217670 | 0.814775 | 1.297170e-51 | -8.615850e-47 |
| Msa0279390 | Msa1217670 | 0.841303 | 5.155670e-58 | -8.615850e-47 |
| Msa0280150 | Msa1217670 | 0.849780 | 2.596425e-60 | -8.615850e-47 |
| Msa0302890 | Msa1217670 | 0.822436 | 2.371840e-53 | -8.615850e-47 |
| Msa0304100 | Msa1217670 | 0.859462 | 4.067305e-63 | -8.615850e-47 |
| Msa0305330 | Msa1217670 | 0.850028 | 2.212648e-60 | -8.615850e-47 |
| Msa0318880 | Msa1217670 | 0.830519 | 2.806295e-55 | -8.615850e-47 |
| Msa0338960 | Msa1217670 | 0.804037 | 2.617630e-49 | -8.615850e-47 |
| Msa0347990 | Msa1217670 | 0.806047 | 9.941506e-50 | -8.615850e-47 |
| Msa0362890 | Msa1217670 | 0.802688 | 4.981152e-49 | -8.615850e-47 |
| Msa1195060 | Msa1217670 | 0.810768 | 9.781673e-51 | -8.615850e-47 |
| Msa1201640 | Msa1217670 | 0.823371 | 1.435770e-53 | -8.615850e-47 |
| Msa1211340 | Msa1217670 | 0.812539 | 4.030122e-51 | -8.615850e-47 |
| Msa1215070 | Msa1217670 | 0.833467 | 5.245323e-56 | -8.615850e-47 |
| Msa1217670 | Msa1254620 | 0.840248 | 9.748686e-58 | -8.615850e-47 |
| Msa1217670 | Msa1259640 | 0.812882 | 3.388995e-51 | -8.615850e-47 |
| Msa1217670 | Msa1268680 | 0.823158 | 1.610024e-53 | -8.615850e-47 |
| Msa1217670 | Msa1329790 | 0.808730 | 2.682778e-50 | -8.615850e-47 |
| Msa1217670 | Msa1338250 | 0.833276 | 5.853477e-56 | -8.615850e-47 |
| Msa1217670 | Msa1366550 | 0.804963 | 1.678363e-49 | -8.615850e-47 |
| Msa1217670 | Msa1372790 | 0.841887 | 3.618462e-58 | -8.615850e-47 |
| Msa1217670 | Msa1401460 | 0.808491 | 3.017821e-50 | -8.615850e-47 |
| Msa1217670 | Msa1409500 | 0.804583 | 2.015213e-49 | -8.615850e-47 |
| Msa1217670 | Msa1420250 | 0.853800 | 1.880859e-61 | -8.615850e-47 |
| Msa1217670 | Msa1422430 | 0.806269 | 8.928629e-50 | -8.615850e-47 |
| Msa1217670 | Msa1426910 | 0.856557 | 2.969044e-62 | -8.615850e-47 |
| Msa1217670 | Msa1431170 | 0.803671 | 3.118831e-49 | -8.615850e-47 |
| Msa1217670 | Msa1435260 | 0.854396 | 1.265491e-61 | -8.615850e-47 |
| Msa1217670 | Msa1446780 | 0.800630 | 1.316720e-48 | -8.615850e-47 |
| Msa1217670 | Msa1460580 | 0.809158 | 2.172436e-50 | -8.615850e-47 |
| Msa1217670 | Msa1464370 | 0.854118 | 1.522433e-61 | -8.615850e-47 |
| Msa1217670 | Msa1466590 | 0.802515 | 5.409197e-49 | -8.615850e-47 |
| Msa1217670 | Msa1467000 | 0.823399 | 1.414118e-53 | -8.615850e-47 |
| Msa0483740 | Msa1217670 | 0.815887 | 7.344398e-52 | -8.615850e-47 |
| Msa0510290 | Msa1217670 | 0.810093 | 1.368214e-50 | -8.615850e-47 |
| Msa0511150 | Msa1217670 | 0.802452 | 5.573850e-49 | -8.615850e-47 |
| Msa0517650 | Msa1217670 | 0.803295 | 3.731174e-49 | -8.615850e-47 |
| Msa0544730 | Msa1217670 | 0.808676 | 2.755230e-50 | -8.615850e-47 |
| Msa0547680 | Msa1217670 | 0.843705 | 1.188738e-58 | -8.615850e-47 |
| Msa0594200 | Msa1217670 | 0.805256 | 1.457712e-49 | -8.615850e-47 |
| Msa0861830 | Msa1217670 | 0.823738 | 1.178527e-53 | -8.615850e-47 |
| Msa0969330 | Msa1217670 | 0.824849 | 6.460018e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217670 | MtrunA17_Chr4g0067011 | 86.731 | 309 | 23 | 5 | 1 | 300 | 1 | 300 | 0.0 | 536 |
| Msa1217670 | MtrunA17_Chr4g0067011 | 46.094 | 128 | 69 | 0 | 253 | 380 | 81 | 208 | 6.83e-29 | 118 |
| Msa1217670 | MtrunA17_Chr2g0296381 | 92.800 | 250 | 18 | 0 | 3 | 252 | 1 | 250 | 8.30e-173 | 499 |
| Msa1217670 | MtrunA17_Chr2g0296381 | 45.038 | 131 | 72 | 0 | 250 | 380 | 76 | 206 | 2.60e-28 | 116 |
| Msa1217670 | MtrunA17_Chr7g0268891 | 66.221 | 299 | 82 | 4 | 5 | 292 | 2 | 292 | 6.07e-138 | 397 |
| Msa1217670 | MtrunA17_Chr7g0268891 | 38.583 | 127 | 78 | 0 | 253 | 379 | 78 | 204 | 1.06e-22 | 97.8 |
| Msa1217670 | MtrunA17_Chr4g0067381 | 82.581 | 155 | 20 | 1 | 227 | 381 | 59 | 206 | 8.84e-76 | 233 |
| Msa1217670 | MtrunA17_Chr4g0067381 | 53.365 | 208 | 94 | 1 | 1 | 208 | 1 | 205 | 3.89e-66 | 208 |
| Msa1217670 | MtrunA17_Chr4g0067071 | 56.000 | 200 | 88 | 0 | 9 | 208 | 5 | 204 | 5.29e-75 | 231 |
| Msa1217670 | MtrunA17_Chr4g0067071 | 76.744 | 129 | 30 | 0 | 253 | 381 | 77 | 205 | 1.47e-52 | 174 |
| Msa1217670 | MtrunA17_Chr4g0067051 | 55.392 | 204 | 87 | 2 | 7 | 208 | 3 | 204 | 1.28e-72 | 225 |
| Msa1217670 | MtrunA17_Chr4g0067051 | 70.543 | 129 | 38 | 0 | 253 | 381 | 77 | 205 | 1.10e-57 | 187 |
| Msa1217670 | MtrunA17_Chr4g0067031 | 51.528 | 229 | 102 | 4 | 2 | 224 | 3 | 228 | 2.23e-66 | 215 |
| Msa1217670 | MtrunA17_Chr4g0067031 | 70.130 | 154 | 38 | 2 | 227 | 379 | 61 | 207 | 5.00e-58 | 193 |
| Msa1217670 | MtrunA17_Chr4g0074661 | 60.674 | 89 | 34 | 1 | 3 | 91 | 1 | 88 | 1.14e-29 | 110 |
| Msa1217670 | MtrunA17_Chr6g0453081 | 28.163 | 245 | 159 | 6 | 12 | 254 | 23 | 252 | 9.94e-27 | 112 |
| Msa1217670 | MtrunA17_Chr4g0068101 | 61.765 | 102 | 38 | 1 | 237 | 338 | 3 | 103 | 1.31e-24 | 97.1 |
| Msa1217670 | MtrunA17_Chr4g0068101 | 50.000 | 92 | 46 | 0 | 77 | 168 | 14 | 105 | 6.25e-17 | 75.9 |
| Msa1217670 | MtrunA17_Chr6g0453061 | 29.717 | 212 | 139 | 4 | 45 | 254 | 49 | 252 | 9.01e-23 | 100 |
| Msa1217670 | MtrunA17_Chr8g0361901 | 27.570 | 214 | 145 | 4 | 45 | 256 | 51 | 256 | 7.44e-22 | 97.4 |
| Msa1217670 | MtrunA17_Chr5g0416731 | 26.066 | 211 | 146 | 5 | 46 | 254 | 25 | 227 | 3.03e-20 | 92.0 |
| Msa1217670 | MtrunA17_Chr7g0231721 | 26.087 | 207 | 143 | 5 | 50 | 254 | 29 | 227 | 4.21e-20 | 90.5 |
| Msa1217670 | MtrunA17_Chr7g0231571 | 27.746 | 173 | 119 | 4 | 84 | 254 | 28 | 196 | 1.11e-17 | 82.0 |
| Msa1217670 | MtrunA17_Chr5g0416911 | 27.746 | 173 | 119 | 4 | 84 | 254 | 36 | 204 | 1.13e-17 | 82.0 |
| Msa1217670 | MtrunA17_Chr7g0231751 | 24.681 | 235 | 155 | 5 | 34 | 250 | 21 | 251 | 5.84e-17 | 80.9 |
| Msa1217670 | MtrunA17_Chr7g0231581 | 26.590 | 173 | 121 | 4 | 84 | 254 | 28 | 196 | 6.01e-17 | 80.9 |
| Msa1217670 | MtrunA17_Chr5g0416901 | 25.097 | 259 | 172 | 9 | 61 | 306 | 23 | 272 | 1.03e-16 | 80.5 |
| Msa1217670 | MtrunA17_Chr5g0416711 | 24.895 | 237 | 152 | 7 | 34 | 250 | 21 | 251 | 1.05e-14 | 75.9 |
| Msa1217670 | MtrunA17_Chr1g0166131 | 25.153 | 163 | 117 | 3 | 94 | 254 | 102 | 261 | 1.49e-14 | 75.5 |
| Msa1217670 | MtrunA17_Chr2g0285881 | 26.147 | 218 | 142 | 7 | 41 | 251 | 115 | 320 | 1.82e-14 | 75.1 |
| Msa1217670 | MtrunA17_Chr1g0166181 | 25.767 | 163 | 116 | 3 | 94 | 254 | 101 | 260 | 6.54e-14 | 73.6 |
| Msa1217670 | MtrunA17_Chr7g0231801 | 26.380 | 163 | 114 | 2 | 91 | 250 | 36 | 195 | 3.32e-12 | 66.2 |
| Msa1217670 | MtrunA17_Chr5g0416681 | 26.380 | 163 | 114 | 2 | 91 | 250 | 36 | 195 | 3.45e-12 | 66.2 |
| Msa1217670 | MtrunA17_Chr1g0166151 | 23.121 | 173 | 127 | 4 | 84 | 254 | 4 | 172 | 1.65e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1217670 | AT4G02570.4 | 81.452 | 248 | 46 | 0 | 5 | 252 | 2 | 249 | 1.44e-150 | 443 |
| Msa1217670 | AT4G02570.4 | 44.531 | 128 | 71 | 0 | 253 | 380 | 78 | 205 | 6.69e-29 | 119 |
| Msa1217670 | AT4G02570.2 | 81.452 | 248 | 46 | 0 | 5 | 252 | 2 | 249 | 1.44e-150 | 443 |
| Msa1217670 | AT4G02570.2 | 44.531 | 128 | 71 | 0 | 253 | 380 | 78 | 205 | 6.69e-29 | 119 |
| Msa1217670 | AT4G02570.1 | 81.452 | 248 | 46 | 0 | 5 | 252 | 2 | 249 | 1.44e-150 | 443 |
| Msa1217670 | AT4G02570.1 | 44.531 | 128 | 71 | 0 | 253 | 380 | 78 | 205 | 6.69e-29 | 119 |
| Msa1217670 | AT4G02570.3 | 81.452 | 248 | 46 | 0 | 5 | 252 | 2 | 249 | 1.44e-150 | 443 |
| Msa1217670 | AT4G02570.3 | 44.531 | 128 | 71 | 0 | 253 | 380 | 78 | 205 | 6.69e-29 | 119 |
| Msa1217670 | AT1G43140.1 | 61.134 | 247 | 96 | 0 | 6 | 252 | 12 | 258 | 4.27e-109 | 336 |
| Msa1217670 | AT1G43140.1 | 39.062 | 128 | 78 | 0 | 253 | 380 | 87 | 214 | 6.97e-24 | 103 |
| Msa1217670 | AT1G59790.2 | 55.556 | 297 | 113 | 5 | 3 | 288 | 6 | 294 | 1.10e-108 | 323 |
| Msa1217670 | AT1G59790.2 | 42.748 | 131 | 71 | 2 | 253 | 380 | 82 | 211 | 1.25e-23 | 101 |
| Msa1217670 | AT1G59790.1 | 55.556 | 297 | 113 | 5 | 3 | 288 | 6 | 294 | 1.68e-108 | 323 |
| Msa1217670 | AT1G59790.1 | 42.748 | 131 | 71 | 2 | 253 | 380 | 82 | 211 | 1.15e-23 | 101 |
| Msa1217670 | AT1G02980.1 | 59.200 | 250 | 100 | 2 | 3 | 251 | 1 | 249 | 3.68e-103 | 321 |
| Msa1217670 | AT1G02980.1 | 35.938 | 128 | 82 | 0 | 253 | 380 | 79 | 206 | 3.13e-20 | 93.2 |
| Msa1217670 | AT1G02980.2 | 59.200 | 250 | 100 | 2 | 3 | 251 | 1 | 249 | 3.68e-103 | 321 |
| Msa1217670 | AT1G02980.2 | 35.938 | 128 | 82 | 0 | 253 | 380 | 79 | 206 | 3.13e-20 | 93.2 |
| Msa1217670 | AT1G59800.1 | 55.102 | 245 | 106 | 1 | 9 | 253 | 7 | 247 | 8.38e-94 | 281 |
| Msa1217670 | AT1G59800.1 | 42.969 | 128 | 73 | 0 | 253 | 380 | 75 | 202 | 1.31e-24 | 101 |
| Msa1217670 | AT1G26830.1 | 28.175 | 252 | 150 | 6 | 12 | 254 | 26 | 255 | 8.24e-24 | 103 |
| Msa1217670 | AT1G69670.1 | 28.302 | 212 | 142 | 5 | 45 | 254 | 52 | 255 | 7.55e-21 | 95.1 |
| Msa1217670 | AT1G69670.2 | 28.302 | 212 | 142 | 5 | 45 | 254 | 52 | 255 | 7.55e-21 | 95.1 |
Find 82 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCGTTTCTTTCACTATT+TGG | 0.127323 | 8_1:-80157804 | Msa1217670:CDS |
| TTAGATATATTTGTTGAAAT+TGG | 0.149900 | 8_1:-80157341 | Msa1217670:CDS |
| ATAAATACCATATCCATAAA+AGG | 0.209954 | 8_1:-80155979 | Msa1217670:CDS |
| CTTCTTATCCTTCTATTACT+TGG | 0.263297 | 8_1:-80155930 | Msa1217670:intron |
| TGAAATTGGAATGGGGAAAA+TGG | 0.276258 | 8_1:-80157327 | Msa1217670:CDS |
| ATCTTTAATTGCAGATTTCT+AGG | 0.285740 | 8_1:-80160152 | Msa1217670:intron |
| TAAAATCCCATCCTTGTTCT+AGG | 0.294855 | 8_1:+80160077 | None:intergenic |
| TTAACCAATATTTGATCAAT+AGG | 0.295799 | 8_1:+80155366 | None:intergenic |
| CTTTCTTCTCTTGAAGAAAC+TGG | 0.301267 | 8_1:-80155953 | Msa1217670:CDS |
| ATTCTCGAAAGGCTTCAAAT+TGG | 0.308428 | 8_1:-80157250 | Msa1217670:CDS |
| AATCAGGACAAGAATCTTCT+AGG | 0.335743 | 8_1:+80157225 | None:intergenic |
| TAGTGAGCCAAAGTTATTAG+AGG | 0.338740 | 8_1:-80157049 | Msa1217670:intron |
| ATTGTTTCTGCAAAGTGTTT+TGG | 0.346534 | 8_1:+80155291 | None:intergenic |
| GCTTAAGACGGGAGAAAGAT+AGG | 0.347462 | 8_1:-80157095 | Msa1217670:CDS |
| AGAGCCTATTGATCAAATAT+TGG | 0.354126 | 8_1:-80155370 | Msa1217670:CDS |
| CTCGCGATTCAACTCATTCA+AGG | 0.365680 | 8_1:-80160328 | Msa1217670:intron |
| TACAGCATCATGTAATCTTC+AGG | 0.394192 | 8_1:+80159992 | None:intergenic |
| GTTGGCTTGCTTCCGTGATT+TGG | 0.395108 | 8_1:-80157732 | Msa1217670:intron |
| TCTTTCTCCTTCTTCAACCT+AGG | 0.395593 | 8_1:-80160363 | Msa1217670:five_prime_UTR |
| TTGGCTTTCTACTCCGAGAT+TGG | 0.395713 | 8_1:-80155336 | Msa1217670:CDS |
| CTTCCACCTCTTAATGAAGT+TGG | 0.401442 | 8_1:-80157755 | Msa1217670:CDS |
| TTCCACCTCTTAATGAAGTT+GGG | 0.402385 | 8_1:-80157754 | Msa1217670:CDS |
| ATATTTGTTGAAATTGGAAT+GGG | 0.416286 | 8_1:-80157335 | Msa1217670:CDS |
| TCTTGTGCTTTCTCCAATCT+CGG | 0.416545 | 8_1:+80155323 | None:intergenic |
| CTTTCTCCTTCTTCAACCTA+GGG | 0.419164 | 8_1:-80160362 | Msa1217670:five_prime_UTR |
| TAAATACCATATCCATAAAA+GGG | 0.428557 | 8_1:-80155978 | Msa1217670:CDS |
| ACCTCTTAATGAAGTTGGGT+TGG | 0.429517 | 8_1:-80157750 | Msa1217670:CDS |
| AAGCTCAAGAACATTCTTGA+AGG | 0.438292 | 8_1:-80160037 | Msa1217670:CDS |
| CAGGTTTACAAGGAACTACA+TGG | 0.439895 | 8_1:-80157530 | Msa1217670:CDS |
| ATCACCAACCAAGTAATAGA+AGG | 0.445723 | 8_1:+80155922 | None:intergenic |
| GAACAAACCTCTAATAACTT+TGG | 0.461535 | 8_1:+80157042 | None:intergenic |
| GCCAACCCAACTTCATTAAG+AGG | 0.469591 | 8_1:+80157749 | None:intergenic |
| TATATTTGTTGAAATTGGAA+TGG | 0.470308 | 8_1:-80157336 | Msa1217670:CDS |
| AATATTGGTTAATAATGCAT+TGG | 0.474154 | 8_1:-80155355 | Msa1217670:CDS |
| CATACCTTGAGCATATAATC+AGG | 0.483000 | 8_1:+80157209 | None:intergenic |
| TAAGAGGTGGAAGTGACCTC+CGG | 0.485058 | 8_1:+80157765 | None:intergenic |
| TCAGGACTGAATTGAGGCTC+AGG | 0.498314 | 8_1:+80160010 | None:intergenic |
| TTATTATTTACAGGTTTACA+AGG | 0.507125 | 8_1:-80157540 | Msa1217670:intron |
| AGCGGCTGAGAATAGTCATT+AGG | 0.516656 | 8_1:+80159817 | None:intergenic |
| TACGAGAACTTGTAAAGAGA+TGG | 0.518043 | 8_1:-80157856 | Msa1217670:CDS |
| TTCTGCTTATTATTCTCGAA+AGG | 0.520286 | 8_1:-80157261 | Msa1217670:CDS |
| TGGACCGCTACTTCATTGCC+CGG | 0.528357 | 8_1:-80157784 | Msa1217670:CDS |
| AGTTGAATCGCGAGAATGAA+GGG | 0.536510 | 8_1:+80160337 | None:intergenic |
| AATGGATGCAATATTAGCTA+TGG | 0.538365 | 8_1:-80155762 | Msa1217670:intron |
| TTGTCCTGATTATATGCTCA+AGG | 0.542877 | 8_1:-80157213 | Msa1217670:intron |
| TGAGAGAACTACTTGAAAGA+TGG | 0.542909 | 8_1:-80156054 | Msa1217670:CDS |
| GGCTGAGGAGTGCTTAAGAC+GGG | 0.543587 | 8_1:-80157106 | Msa1217670:CDS |
| CTATAGACCTAGAACAAGGA+TGG | 0.545135 | 8_1:-80160084 | Msa1217670:CDS |
| GCAACATGTCAATGAGTGAA+AGG | 0.550034 | 8_1:-80160111 | Msa1217670:exon |
| AATGTAACACGAGCATTGAT+CGG | 0.555523 | 8_1:+80160387 | None:intergenic |
| CAGATCGATCGGAAACATGC+AGG | 0.556359 | 8_1:-80155393 | Msa1217670:CDS |
| TTTCCGATATCCAGATCGAT+CGG | 0.567141 | 8_1:-80155404 | Msa1217670:intron |
| GAGTTGAATCGCGAGAATGA+AGG | 0.569485 | 8_1:+80160336 | None:intergenic |
| TGAGATGCATAGACACGTAA+TGG | 0.569940 | 8_1:-80155780 | Msa1217670:CDS |
| TGAAGAGTACATCGTGTCAA+CGG | 0.578165 | 8_1:-80159770 | Msa1217670:intron |
| AGGGAACCCTAGGTTGAAGA+AGG | 0.578685 | 8_1:+80160356 | None:intergenic |
| ACGAGAACTTGTAAAGAGAT+GGG | 0.578748 | 8_1:-80157855 | Msa1217670:CDS |
| AAGAGGTGGAAGTGACCTCC+GGG | 0.579880 | 8_1:+80157766 | None:intergenic |
| TAATCTTCAGGACTGAATTG+AGG | 0.582140 | 8_1:+80160004 | None:intergenic |
| CTTCAAAATCATTCTCATAG+TGG | 0.584709 | 8_1:+80157303 | None:intergenic |
| CTTAAGACGGGAGAAAGATA+GGG | 0.586296 | 8_1:-80157094 | Msa1217670:CDS |
| TATTTGTTGAAATTGGAATG+GGG | 0.591338 | 8_1:-80157334 | Msa1217670:CDS |
| ATGGGCGAACCATAAAATCA+TGG | 0.592502 | 8_1:-80157837 | Msa1217670:CDS |
| CAACATTCTATACTATGTAG+AGG | 0.595212 | 8_1:-80155254 | None:intergenic |
| TTGGCTCACTACTAGAGTGC+AGG | 0.595754 | 8_1:+80157061 | None:intergenic |
| TATAGACCTAGAACAAGGAT+GGG | 0.601596 | 8_1:-80160083 | Msa1217670:CDS |
| AAAGATTGATCAAGAACGCG+AGG | 0.608317 | 8_1:-80157399 | Msa1217670:intron |
| GCGAGAATGAAGGGAACCCT+AGG | 0.609584 | 8_1:+80160346 | None:intergenic |
| GGCTGAGAATAGTCATTAGG+AGG | 0.613345 | 8_1:+80159820 | None:intergenic |
| AGGCTGAGGAGTGCTTAAGA+CGG | 0.615169 | 8_1:-80157107 | Msa1217670:CDS |
| ACCATAAAATCATGGTGAGG+TGG | 0.616474 | 8_1:-80157829 | Msa1217670:CDS |
| AAATACCATATCCATAAAAG+GGG | 0.616969 | 8_1:-80155977 | Msa1217670:CDS |
| ACTGTAACATTACCAAATCA+CGG | 0.617141 | 8_1:+80157720 | None:intergenic |
| TCCTTGTACTTGTCATACAG+CGG | 0.620605 | 8_1:+80159799 | None:intergenic |
| GCCGCTGTATGACAAGTACA+AGG | 0.634517 | 8_1:-80159800 | Msa1217670:CDS |
| ACCTCCGGGCAATGAAGTAG+CGG | 0.640019 | 8_1:+80157780 | None:intergenic |
| AACCCAACTTCATTAAGAGG+TGG | 0.641652 | 8_1:+80157752 | None:intergenic |
| AAGATTGATCAAGAACGCGA+GGG | 0.661144 | 8_1:-80157398 | Msa1217670:CDS |
| AGGTTTACAAGGAACTACAT+GGG | 0.683050 | 8_1:-80157529 | Msa1217670:CDS |
| ACCGCTACTTCATTGCCCGG+AGG | 0.702395 | 8_1:-80157781 | Msa1217670:CDS |
| AAAACTATAGACCTAGAACA+AGG | 0.706435 | 8_1:-80160088 | Msa1217670:CDS |
| CGAACCATAAAATCATGGTG+AGG | 0.707704 | 8_1:-80157832 | Msa1217670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATTAATTAA+TGG | - | chr8_1:80159428-80159447 | Msa1217670:intron | 0.0% |
| !! | GAAAAAAATGTAATATAATT+AGG | + | chr8_1:80157407-80157426 | None:intergenic | 10.0% |
| !! | GTATTTATTACTTAATTTAT+TGG | + | chr8_1:80157433-80157452 | None:intergenic | 10.0% |
| !!! | AATCTTTTTGAATAAAAAAA+AGG | + | chr8_1:80158254-80158273 | None:intergenic | 10.0% |
| !! | AATTAGAAAGAAATTGAATT+GGG | + | chr8_1:80155440-80155459 | None:intergenic | 15.0% |
| !! | ATAACAAAGAATTAATGAAA+AGG | + | chr8_1:80155479-80155498 | None:intergenic | 15.0% |
| !!! | TTTTTTCAAATTTTTACCAA+CGG | + | chr8_1:80156027-80156046 | None:intergenic | 15.0% |
| !! | CCAATAATAATTTGATAAAA+TGG | + | chr8_1:80156793-80156812 | None:intergenic | 15.0% |
| !!! | CCATTTTATCAAATTATTAT+TGG | - | chr8_1:80156790-80156809 | Msa1217670:intron | 15.0% |
| !! | ATTAAAAAACTACTTGTTTA+AGG | - | chr8_1:80157015-80157034 | Msa1217670:intron | 15.0% |
| !! | TTAAAAAACTACTTGTTTAA+GGG | - | chr8_1:80157016-80157035 | Msa1217670:intron | 15.0% |
| !! | TAATATAATTAGGGATATTT+CGG | + | chr8_1:80157397-80157416 | None:intergenic | 15.0% |
| !! | TTGTTTATTGCATTTAATAT+AGG | - | chr8_1:80158012-80158031 | Msa1217670:intron | 15.0% |
| !! | TTCATTATAGAATATATTGA+CGG | - | chr8_1:80158100-80158119 | Msa1217670:intron | 15.0% |
| !!! | TATGTTTGTCTTTTTTAATA+TGG | - | chr8_1:80158188-80158207 | Msa1217670:intron | 15.0% |
| !!! | TTAGATATATTTGTTGAAAT+TGG | - | chr8_1:80158325-80158344 | Msa1217670:intron | 15.0% |
| !! | AGTATTAAAATATATGTATG+TGG | - | chr8_1:80158850-80158869 | Msa1217670:intron | 15.0% |
| !! | GAATTAGAAAGAAATTGAAT+TGG | + | chr8_1:80155441-80155460 | None:intergenic | 20.0% |
| !!! | TCTTTGTTATCTATCTAATT+TGG | - | chr8_1:80155489-80155508 | Msa1217670:intron | 20.0% |
| !!! | TAGTATTGTATTGGTATTAT+TGG | - | chr8_1:80156173-80156192 | Msa1217670:intron | 20.0% |
| !! | ATTTCAAAACATGATTGAAT+GGG | + | chr8_1:80156407-80156426 | None:intergenic | 20.0% |
| !! | TAAAAAACTACTTGTTTAAG+GGG | - | chr8_1:80157017-80157036 | Msa1217670:intron | 20.0% |
| !!! | TACAGTGGAATTTTTTAAAA+GGG | + | chr8_1:80157325-80157344 | None:intergenic | 20.0% |
| !!! | ATACAGTGGAATTTTTTAAA+AGG | + | chr8_1:80157326-80157345 | None:intergenic | 20.0% |
| !! | TAAGTAATAAATACTGTGAA+TGG | - | chr8_1:80157439-80157458 | Msa1217670:intron | 20.0% |
| !! | TCATTATAGAATATATTGAC+GGG | - | chr8_1:80158101-80158120 | Msa1217670:intron | 20.0% |
| !! | TTATTATTTACAGGTTTACA+AGG | - | chr8_1:80158126-80158145 | Msa1217670:intron | 20.0% |
| !!! | TTTGTCTTTTTTAATATGGT+AGG | - | chr8_1:80158192-80158211 | Msa1217670:intron | 20.0% |
| !!! | TTTTGAATAAAAAAAAGGCT+TGG | + | chr8_1:80158249-80158268 | None:intergenic | 20.0% |
| !!! | TATATTTGTTGAAATTGGAA+TGG | - | chr8_1:80158330-80158349 | Msa1217670:intron | 20.0% |
| !!! | ATATTTGTTGAAATTGGAAT+GGG | - | chr8_1:80158331-80158350 | Msa1217670:intron | 20.0% |
| !!! | TGCATTGATTTATTATTTGT+TGG | + | chr8_1:80158808-80158827 | None:intergenic | 20.0% |
| !! | TGTACAAAATCAAATATTGT+TGG | + | chr8_1:80158924-80158943 | None:intergenic | 20.0% |
| !!! | AACATTAATTTGAATCAGTT+TGG | - | chr8_1:80158944-80158963 | Msa1217670:intron | 20.0% |
| !! | TTTATAAACATGAGATTGAT+TGG | - | chr8_1:80159355-80159374 | Msa1217670:intron | 20.0% |
| !! | ATAAATACCATATCCATAAA+AGG | - | chr8_1:80159687-80159706 | Msa1217670:intron | 20.0% |
| !! | TAAATACCATATCCATAAAA+GGG | - | chr8_1:80159688-80159707 | Msa1217670:intron | 20.0% |
| !! | TTAGGAAAAAAAATAATCAG+CGG | + | chr8_1:80159792-80159811 | None:intergenic | 20.0% |
| !! | GTTTATAAATAACATAGAGA+TGG | + | chr8_1:80159943-80159962 | None:intergenic | 20.0% |
| !! | ACACTTTAATTGGAAAAAAA+AGG | - | chr8_1:80160057-80160076 | Msa1217670:CDS | 20.0% |
| !! | TTAACCAATATTTGATCAAT+AGG | + | chr8_1:80160303-80160322 | None:intergenic | 20.0% |
| !!! | AATATTGGTTAATAATGCAT+TGG | - | chr8_1:80160311-80160330 | Msa1217670:intron | 20.0% |
| ! | ATCTTTAATTGCAGATTTCT+AGG | - | chr8_1:80155514-80155533 | Msa1217670:intron | 25.0% |
| !!! | TAGGTTATTTTTGCTTAGTT+TGG | - | chr8_1:80155533-80155552 | Msa1217670:intron | 25.0% |
| ! | TTGACTCTATAGTATTGTAT+TGG | - | chr8_1:80156164-80156183 | Msa1217670:intron | 25.0% |
| ! | ATAGCAAACAAATCAAGTAT+GGG | + | chr8_1:80156213-80156232 | None:intergenic | 25.0% |
| ! | AATAGCAAACAAATCAAGTA+TGG | + | chr8_1:80156214-80156233 | None:intergenic | 25.0% |
| ! | TATTATGTAGCTTTCATACA+AGG | - | chr8_1:80156306-80156325 | Msa1217670:intron | 25.0% |
| ! | TCAAAACAAGTACAGAAATA+TGG | - | chr8_1:80156348-80156367 | Msa1217670:intron | 25.0% |
| ! | CATTTCAAAACATGATTGAA+TGG | + | chr8_1:80156408-80156427 | None:intergenic | 25.0% |
| !!! | TGGTTGACAAATACTTTTTT+GGG | - | chr8_1:80156494-80156513 | Msa1217670:intron | 25.0% |
| !! | ATGTTTTCATTCATTTCTCT+AGG | + | chr8_1:80156924-80156943 | None:intergenic | 25.0% |
| ! | ATTGTCAAAGACTCAAAATT+TGG | + | chr8_1:80156995-80157014 | None:intergenic | 25.0% |
| ! | TAATGCAGTTGAAAATTTGA+AGG | + | chr8_1:80157362-80157381 | None:intergenic | 25.0% |
| ! | ATCGCAAAAATTAAGAAACA+TGG | + | chr8_1:80157508-80157527 | None:intergenic | 25.0% |
| !! | ATTTTTGCGATTTAGTCAAT+AGG | - | chr8_1:80157517-80157536 | Msa1217670:CDS | 25.0% |
| ! | GAAGAAAAAAGTAAACCAAA+AGG | + | chr8_1:80157735-80157754 | None:intergenic | 25.0% |
| ! | TTGAATGCAATGACAATAAT+AGG | + | chr8_1:80158074-80158093 | None:intergenic | 25.0% |
| !! | TATTTGTTGAAATTGGAATG+GGG | - | chr8_1:80158332-80158351 | Msa1217670:intron | 25.0% |
| !! | GAAAAAGCATGATCAAATAA+AGG | + | chr8_1:80158533-80158552 | None:intergenic | 25.0% |
| !! | GTACTTTTCATACAATTGTT+CGG | + | chr8_1:80159087-80159106 | None:intergenic | 25.0% |
| !! | ACAATTGTATGAAAAGTACA+AGG | - | chr8_1:80159088-80159107 | Msa1217670:intron | 25.0% |
| !! | TATCCTGATTTTGCTAAATA+TGG | - | chr8_1:80159494-80159513 | Msa1217670:intron | 25.0% |
| !! | AATGTGATTTTCTTATCACT+AGG | - | chr8_1:80159550-80159569 | Msa1217670:intron | 25.0% |
| ! | AAATACCATATCCATAAAAG+GGG | - | chr8_1:80159689-80159708 | Msa1217670:intron | 25.0% |
| ! | GAGGAAAGCAAAATAAAATT+AGG | + | chr8_1:80159810-80159829 | None:intergenic | 25.0% |
| !! | TACTTCACTTTATTTATCTC+AGG | - | chr8_1:80159856-80159875 | Msa1217670:intron | 25.0% |
| ! | ATTTCTCAGTTCATTAATGA+TGG | - | chr8_1:80159968-80159987 | Msa1217670:intron | 25.0% |
| ! | AAGCATCATTAAAGAAATCA+AGG | + | chr8_1:80160093-80160112 | None:intergenic | 25.0% |
| ATAGAAGAAGAAGAAGATGA+AGG | + | chr8_1:80155397-80155416 | None:intergenic | 30.0% | |
| AAAACTATAGACCTAGAACA+AGG | - | chr8_1:80155578-80155597 | Msa1217670:intron | 30.0% | |
| ACGAAAAGAGGTAAAAAAGT+AGG | + | chr8_1:80155728-80155747 | None:intergenic | 30.0% | |
| AATCTCAAGAAAACGAAAAG+AGG | + | chr8_1:80155740-80155759 | None:intergenic | 30.0% | |
| !! | TTGACGTTTGTTTTCTTTAC+AGG | - | chr8_1:80155796-80155815 | Msa1217670:intron | 30.0% |
| TTGAATGTAATCACATGTGT+TGG | - | chr8_1:80156056-80156075 | Msa1217670:CDS | 30.0% | |
| ! | TTTGTTGTAAATAACCTCTG+TGG | + | chr8_1:80156134-80156153 | None:intergenic | 30.0% |
| !! | ACTTCTTTGTTTCTTTTTCG+TGG | - | chr8_1:80156275-80156294 | Msa1217670:intron | 30.0% |
| !! | CTTCTTTGTTTCTTTTTCGT+GGG | - | chr8_1:80156276-80156295 | Msa1217670:intron | 30.0% |
| !! | TTCTTTGTTTCTTTTTCGTG+GGG | - | chr8_1:80156277-80156296 | Msa1217670:intron | 30.0% |
| AAACATGATTGAATGGGTAA+AGG | + | chr8_1:80156401-80156420 | None:intergenic | 30.0% | |
| AGCAAATAGTGAATAATGCA+TGG | - | chr8_1:80156470-80156489 | Msa1217670:intron | 30.0% | |
| !!! | CTGGTTGACAAATACTTTTT+TGG | - | chr8_1:80156493-80156512 | Msa1217670:intron | 30.0% |
| TAGCAATCACTCACTATTTA+AGG | - | chr8_1:80156702-80156721 | Msa1217670:intron | 30.0% | |
| AGCAATCACTCACTATTTAA+GGG | - | chr8_1:80156703-80156722 | Msa1217670:intron | 30.0% | |
| ! | AATTTTGTGTATACCCACTA+CGG | + | chr8_1:80156882-80156901 | None:intergenic | 30.0% |
| TGGAAACAGAATTAAAGAAG+TGG | - | chr8_1:80156961-80156980 | Msa1217670:intron | 30.0% | |
| ! | TGTAAGAAGTTTTACAGACA+TGG | - | chr8_1:80157063-80157082 | Msa1217670:CDS | 30.0% |
| ! | GTAAGAAGTTTTACAGACAT+GGG | - | chr8_1:80157064-80157083 | Msa1217670:CDS | 30.0% |
| AGGAATCAGATAAATTAGTG+AGG | - | chr8_1:80157098-80157117 | Msa1217670:CDS | 30.0% | |
| GGAATCAGATAAATTAGTGA+GGG | - | chr8_1:80157099-80157118 | Msa1217670:CDS | 30.0% | |
| TAAGGGTAAGATCATGTTAA+AGG | + | chr8_1:80157208-80157227 | None:intergenic | 30.0% | |
| TACCTTTGTCTCTAAATAGA+AGG | - | chr8_1:80157299-80157318 | Msa1217670:CDS | 30.0% | |
| TCAATAGGATCCTATATTCA+GGG | - | chr8_1:80157532-80157551 | Msa1217670:intron | 30.0% | |
| GATGGCATTTATTAGCATAA+GGG | + | chr8_1:80157703-80157722 | None:intergenic | 30.0% | |
| AGATGGCATTTATTAGCATA+AGG | + | chr8_1:80157704-80157723 | None:intergenic | 30.0% | |
| ACCAAAAGGAAAACAAAAGA+TGG | + | chr8_1:80157721-80157740 | None:intergenic | 30.0% | |
| ! | TCATGTTTTTCTCTCAAAGA+AGG | + | chr8_1:80157779-80157798 | None:intergenic | 30.0% |
| TTCTCGTTTCTTTCACTATT+TGG | - | chr8_1:80157862-80157881 | Msa1217670:CDS | 30.0% | |
| ACTGTAACATTACCAAATCA+CGG | + | chr8_1:80157949-80157968 | None:intergenic | 30.0% | |
| !!! | TGACGGGTTTTATTATTTAC+AGG | - | chr8_1:80158117-80158136 | Msa1217670:intron | 30.0% |
| ! | CTTGGTTAGTTGATATGAAT+TGG | + | chr8_1:80158231-80158250 | None:intergenic | 30.0% |
| CTTCAAAATCATTCTCATAG+TGG | + | chr8_1:80158366-80158385 | None:intergenic | 30.0% | |
| TTCTGCTTATTATTCTCGAA+AGG | - | chr8_1:80158405-80158424 | Msa1217670:intron | 30.0% | |
| GAACAAACCTCTAATAACTT+TGG | + | chr8_1:80158627-80158646 | None:intergenic | 30.0% | |
| TTTGTGAAAACCGATTGAAT+CGG | + | chr8_1:80158885-80158904 | None:intergenic | 30.0% | |
| ! | ACACTATTCAGTATTCCTTT+TGG | - | chr8_1:80158984-80159003 | Msa1217670:intron | 30.0% |
| TTGAGTACACATAGTGTAAA+TGG | + | chr8_1:80159045-80159064 | None:intergenic | 30.0% | |
| TTTACACTATGTGTACTCAA+AGG | - | chr8_1:80159045-80159064 | Msa1217670:intron | 30.0% | |
| AATTGTTCGGAATATTCATG+AGG | + | chr8_1:80159074-80159093 | None:intergenic | 30.0% | |
| AAGTACAAGGAAACATTTGA+CGG | - | chr8_1:80159101-80159120 | Msa1217670:intron | 30.0% | |
| !! | AGCTATTTTCTACATGAATC+AGG | + | chr8_1:80159238-80159257 | None:intergenic | 30.0% |
| AACATGAGATTGATTGGAAA+TGG | - | chr8_1:80159361-80159380 | Msa1217670:intron | 30.0% | |
| CTTCCATATTTAGCAAAATC+AGG | + | chr8_1:80159500-80159519 | None:intergenic | 30.0% | |
| ! | CTGATTTTGCTAAATATGGA+AGG | - | chr8_1:80159498-80159517 | Msa1217670:intron | 30.0% |
| GATAACGAAAAATTCTTGAG+AGG | + | chr8_1:80159664-80159683 | None:intergenic | 30.0% | |
| CTTCTTATCCTTCTATTACT+TGG | - | chr8_1:80159736-80159755 | Msa1217670:intron | 30.0% | |
| TTATCCTTCTATTACTTGGT+TGG | - | chr8_1:80159740-80159759 | Msa1217670:intron | 30.0% | |
| AATGGATGCAATATTAGCTA+TGG | - | chr8_1:80159904-80159923 | Msa1217670:intron | 30.0% | |
| ATAACATAGAGATGGAAAAC+AGG | + | chr8_1:80159935-80159954 | None:intergenic | 30.0% | |
| ! | TGATGGAAACTTGTTTGAAT+TGG | - | chr8_1:80159985-80160004 | Msa1217670:intron | 30.0% |
| ATTCAACCAAATGACTGTTA+TGG | + | chr8_1:80160195-80160214 | None:intergenic | 30.0% | |
| AGAGCCTATTGATCAAATAT+TGG | - | chr8_1:80160296-80160315 | Msa1217670:intron | 30.0% | |
| !!! | ATTGTTTCTGCAAAGTGTTT+TGG | + | chr8_1:80160378-80160397 | None:intergenic | 30.0% |
| !! | AATGTAACACGAGCATTGAT+CGG | + | chr8_1:80155282-80155301 | None:intergenic | 35.0% |
| AAGAAGAAGAAGATGAAGGA+AGG | + | chr8_1:80155393-80155412 | None:intergenic | 35.0% | |
| TATAGACCTAGAACAAGGAT+GGG | - | chr8_1:80155583-80155602 | Msa1217670:intron | 35.0% | |
| TAAAATCCCATCCTTGTTCT+AGG | + | chr8_1:80155592-80155611 | None:intergenic | 35.0% | |
| ! | AAGGATGGGATTTTATGCAT+AGG | - | chr8_1:80155597-80155616 | Msa1217670:intron | 35.0% |
| ! | AGGATGGGATTTTATGCATA+GGG | - | chr8_1:80155598-80155617 | Msa1217670:intron | 35.0% |
| AAGCTCAAGAACATTCTTGA+AGG | - | chr8_1:80155629-80155648 | Msa1217670:intron | 35.0% | |
| TAATCTTCAGGACTGAATTG+AGG | + | chr8_1:80155665-80155684 | None:intergenic | 35.0% | |
| TACAGCATCATGTAATCTTC+AGG | + | chr8_1:80155677-80155696 | None:intergenic | 35.0% | |
| GCTAACATAAACACAAACAC+CGG | - | chr8_1:80155979-80155998 | Msa1217670:CDS | 35.0% | |
| CTAACATAAACACAAACACC+GGG | - | chr8_1:80155980-80155999 | Msa1217670:CDS | 35.0% | |
| CTTTGTAAACTATGCTTAGC+TGG | + | chr8_1:80156448-80156467 | None:intergenic | 35.0% | |
| AATAGTGAATAATGCATGGC+TGG | - | chr8_1:80156474-80156493 | Msa1217670:intron | 35.0% | |
| !!! | TACTTTTTTGGGAACATCAG+AGG | - | chr8_1:80156505-80156524 | Msa1217670:intron | 35.0% |
| !!! | ACTTTTTTGGGAACATCAGA+GGG | - | chr8_1:80156506-80156525 | Msa1217670:intron | 35.0% |
| ATCAGAGGGAAATAAACTGA+GGG | - | chr8_1:80156520-80156539 | Msa1217670:intron | 35.0% | |
| ! | GTAATGTGCTTGATAACATG+CGG | - | chr8_1:80156576-80156595 | Msa1217670:intron | 35.0% |
| ACTCACTATTTAAGGGTGAA+AGG | - | chr8_1:80156710-80156729 | Msa1217670:intron | 35.0% | |
| CTCACTATTTAAGGGTGAAA+GGG | - | chr8_1:80156711-80156730 | Msa1217670:intron | 35.0% | |
| TATGTTAGTGCTTCATATGC+AGG | - | chr8_1:80156842-80156861 | Msa1217670:intron | 35.0% | |
| CATCATCAAGAAGAACTAGA+TGG | - | chr8_1:80156941-80156960 | Msa1217670:intron | 35.0% | |
| TACAATAGCCTGAGTGTAAA+AGG | + | chr8_1:80157047-80157066 | None:intergenic | 35.0% | |
| TTTACAGACATGGGATTGAA+TGG | - | chr8_1:80157073-80157092 | Msa1217670:CDS | 35.0% | |
| TCAGATAAATTAGTGAGGGA+AGG | - | chr8_1:80157103-80157122 | Msa1217670:CDS | 35.0% | |
| CAGATAAATTAGTGAGGGAA+GGG | - | chr8_1:80157104-80157123 | Msa1217670:CDS | 35.0% | |
| AGAATCGTTGTTCTCATGTT+TGG | - | chr8_1:80157139-80157158 | Msa1217670:intron | 35.0% | |
| GTTGGAGTCTAATTGGATAA+GGG | + | chr8_1:80157225-80157244 | None:intergenic | 35.0% | |
| AATTTGAAGGTCCTGTGAAA+AGG | + | chr8_1:80157349-80157368 | None:intergenic | 35.0% | |
| GTCAATAGGATCCTATATTC+AGG | - | chr8_1:80157531-80157550 | Msa1217670:intron | 35.0% | |
| !!! | GCCATCTTTTGTTTTCCTTT+TGG | - | chr8_1:80157717-80157736 | Msa1217670:intron | 35.0% |
| TTTCTTCCCTTTATGAGTTC+AGG | - | chr8_1:80157748-80157767 | Msa1217670:CDS | 35.0% | |
| GTAAGACCTGAACTCATAAA+GGG | + | chr8_1:80157757-80157776 | None:intergenic | 35.0% | |
| TACGAGAACTTGTAAAGAGA+TGG | - | chr8_1:80157810-80157829 | Msa1217670:CDS | 35.0% | |
| ACGAGAACTTGTAAAGAGAT+GGG | - | chr8_1:80157811-80157830 | Msa1217670:CDS | 35.0% | |
| TTCCACCTCTTAATGAAGTT+GGG | - | chr8_1:80157912-80157931 | Msa1217670:intron | 35.0% | |
| AGGTTTACAAGGAACTACAT+GGG | - | chr8_1:80158137-80158156 | Msa1217670:intron | 35.0% | |
| TGAAATTGGAATGGGGAAAA+TGG | - | chr8_1:80158339-80158358 | Msa1217670:intron | 35.0% | |
| ATTCTCGAAAGGCTTCAAAT+TGG | - | chr8_1:80158416-80158435 | Msa1217670:intron | 35.0% | |
| AATCAGGACAAGAATCTTCT+AGG | + | chr8_1:80158444-80158463 | None:intergenic | 35.0% | |
| TTGTCCTGATTATATGCTCA+AGG | - | chr8_1:80158453-80158472 | Msa1217670:intron | 35.0% | |
| CATACCTTGAGCATATAATC+AGG | + | chr8_1:80158460-80158479 | None:intergenic | 35.0% | |
| !!! | GATCATGCTTTTTCTACTAC+AGG | - | chr8_1:80158539-80158558 | Msa1217670:intron | 35.0% |
| TAGTGAGCCAAAGTTATTAG+AGG | - | chr8_1:80158617-80158636 | Msa1217670:intron | 35.0% | |
| GTTCAAAACTCCGATTCAAT+CGG | - | chr8_1:80158872-80158891 | Msa1217670:intron | 35.0% | |
| AAGGAAAAACAGTGACCAAA+AGG | + | chr8_1:80159002-80159021 | None:intergenic | 35.0% | |
| CCTGCATTACAATTTAAGGA+AGG | + | chr8_1:80159021-80159040 | None:intergenic | 35.0% | |
| CCTTCCTTAAATTGTAATGC+AGG | - | chr8_1:80159018-80159037 | Msa1217670:intron | 35.0% | |
| TGGTCCTGCATTACAATTTA+AGG | + | chr8_1:80159025-80159044 | None:intergenic | 35.0% | |
| AGTACAAGGAAACATTTGAC+GGG | - | chr8_1:80159102-80159121 | Msa1217670:intron | 35.0% | |
| TGAGATTGATTGGAAATGGA+CGG | - | chr8_1:80159365-80159384 | Msa1217670:intron | 35.0% | |
| TGGAAATGGACGGAATAAAT+TGG | - | chr8_1:80159375-80159394 | Msa1217670:intron | 35.0% | |
| ! | TCTTTCTTTTCTCGCAAAGA+TGG | + | chr8_1:80159581-80159600 | None:intergenic | 35.0% |
| TGAGAGAACTACTTGAAAGA+TGG | - | chr8_1:80159612-80159631 | Msa1217670:intron | 35.0% | |
| AAAAATTCTTGAGAGGAGCT+TGG | + | chr8_1:80159657-80159676 | None:intergenic | 35.0% | |
| ! | AAAGTCCCCTTTTATGGATA+TGG | + | chr8_1:80159697-80159716 | None:intergenic | 35.0% |
| CTTTCTTCTCTTGAAGAAAC+TGG | - | chr8_1:80159713-80159732 | Msa1217670:intron | 35.0% | |
| ATCACCAACCAAGTAATAGA+AGG | + | chr8_1:80159747-80159766 | None:intergenic | 35.0% | |
| AGTTAAAGAAGGGGAAAAAG+AGG | + | chr8_1:80159829-80159848 | None:intergenic | 35.0% | |
| ! | TTTTTCCCCTTCTTTAACTC+TGG | - | chr8_1:80159830-80159849 | Msa1217670:CDS | 35.0% |
| ! | TTTTCCCCTTCTTTAACTCT+GGG | - | chr8_1:80159831-80159850 | Msa1217670:CDS | 35.0% |
| TAATCCCAGAGTTAAAGAAG+GGG | + | chr8_1:80159838-80159857 | None:intergenic | 35.0% | |
| GTAATCCCAGAGTTAAAGAA+GGG | + | chr8_1:80159839-80159858 | None:intergenic | 35.0% | |
| AGTAATCCCAGAGTTAAAGA+AGG | + | chr8_1:80159840-80159859 | None:intergenic | 35.0% | |
| CTTTGTCAACTATCTAATCC+AGG | - | chr8_1:80160030-80160049 | Msa1217670:CDS | 35.0% | |
| ! | TCCAGGTGTTACACTTTAAT+TGG | - | chr8_1:80160047-80160066 | Msa1217670:CDS | 35.0% |
| TCCAATTAAAGTGTAACACC+TGG | + | chr8_1:80160051-80160070 | None:intergenic | 35.0% | |
| TGACTGTTATGGACTCAATA+AGG | + | chr8_1:80160184-80160203 | None:intergenic | 35.0% | |
| TTGAGTCCATAACAGTCATT+TGG | - | chr8_1:80160186-80160205 | Msa1217670:intron | 35.0% | |
| TCTTTCTCCTTCTTCAACCT+AGG | - | chr8_1:80155303-80155322 | Msa1217670:CDS | 40.0% | |
| CTTTCTCCTTCTTCAACCTA+GGG | - | chr8_1:80155304-80155323 | Msa1217670:CDS | 40.0% | |
| AGTTGAATCGCGAGAATGAA+GGG | + | chr8_1:80155332-80155351 | None:intergenic | 40.0% | |
| AAGATGAAGGAAGGAAGGAA+GGG | + | chr8_1:80155384-80155403 | None:intergenic | 40.0% | |
| AGAAGAAGATGAAGGAAGGA+AGG | + | chr8_1:80155389-80155408 | None:intergenic | 40.0% | |
| GCAACATGTCAATGAGTGAA+AGG | - | chr8_1:80155555-80155574 | Msa1217670:intron | 40.0% | |
| CTATAGACCTAGAACAAGGA+TGG | - | chr8_1:80155582-80155601 | Msa1217670:intron | 40.0% | |
| ! | GGATGGGATTTTATGCATAG+GGG | - | chr8_1:80155599-80155618 | Msa1217670:intron | 40.0% |
| TCCTTGTACTTGTCATACAG+CGG | + | chr8_1:80155870-80155889 | None:intergenic | 40.0% | |
| ! | TGAAGAGTACATCGTGTCAA+CGG | - | chr8_1:80155896-80155915 | Msa1217670:intron | 40.0% |
| CGGTGAGTTACACTTTCATT+TGG | - | chr8_1:80155916-80155935 | Msa1217670:intron | 40.0% | |
| GTTATCACTCGTGTGACAAT+CGG | - | chr8_1:80156238-80156257 | Msa1217670:intron | 40.0% | |
| ! | TGACAATCGGATTTGGAGTT+TGG | - | chr8_1:80156251-80156270 | Msa1217670:intron | 40.0% |
| CATCAGAGGGAAATAAACTG+AGG | - | chr8_1:80156519-80156538 | Msa1217670:intron | 40.0% | |
| GGAAATAAACTGAGGGCAAA+TGG | - | chr8_1:80156527-80156546 | Msa1217670:intron | 40.0% | |
| AAGCACATTACCTCAGCAAA+TGG | + | chr8_1:80156567-80156586 | None:intergenic | 40.0% | |
| CACTCTCAACCTTAAAGAGT+GGG | + | chr8_1:80156615-80156634 | None:intergenic | 40.0% | |
| TCACTCTCAACCTTAAAGAG+TGG | + | chr8_1:80156616-80156635 | None:intergenic | 40.0% | |
| TGTGCTTGATTACATGCACT+AGG | - | chr8_1:80156679-80156698 | Msa1217670:intron | 40.0% | |
| AGACATGGGATTGAATGGAA+AGG | - | chr8_1:80157078-80157097 | Msa1217670:CDS | 40.0% | |
| CTCTTTCTTGCCATATTGAC+CGG | + | chr8_1:80157165-80157184 | None:intergenic | 40.0% | |
| CGTTGGAGTCTAATTGGATA+AGG | + | chr8_1:80157226-80157245 | None:intergenic | 40.0% | |
| ACGTAACGTTGGAGTCTAAT+TGG | + | chr8_1:80157232-80157251 | None:intergenic | 40.0% | |
| AATTAGACTCCAACGTTACG+TGG | - | chr8_1:80157231-80157250 | Msa1217670:CDS | 40.0% | |
| ATTAGACTCCAACGTTACGT+GGG | - | chr8_1:80157232-80157251 | Msa1217670:CDS | 40.0% | |
| GGCCTTCTATTTAGAGACAA+AGG | + | chr8_1:80157304-80157323 | None:intergenic | 40.0% | |
| ! | TTCCACTGTATCCTTTTCAC+AGG | - | chr8_1:80157335-80157354 | Msa1217670:CDS | 40.0% |
| !! | CCACTTTTGTCCCTGAATAT+AGG | + | chr8_1:80157545-80157564 | None:intergenic | 40.0% |
| CCTATATTCAGGGACAAAAG+TGG | - | chr8_1:80157542-80157561 | Msa1217670:intron | 40.0% | |
| GGTAAGACCTGAACTCATAA+AGG | + | chr8_1:80157758-80157777 | None:intergenic | 40.0% | |
| ATGGGCGAACCATAAAATCA+TGG | - | chr8_1:80157829-80157848 | Msa1217670:CDS | 40.0% | |
| CGAACCATAAAATCATGGTG+AGG | - | chr8_1:80157834-80157853 | Msa1217670:CDS | 40.0% | |
| ACCATAAAATCATGGTGAGG+TGG | - | chr8_1:80157837-80157856 | Msa1217670:CDS | 40.0% | |
| CTTCCACCTCTTAATGAAGT+TGG | - | chr8_1:80157911-80157930 | Msa1217670:intron | 40.0% | |
| AACCCAACTTCATTAAGAGG+TGG | + | chr8_1:80157917-80157936 | None:intergenic | 40.0% | |
| ACCTCTTAATGAAGTTGGGT+TGG | - | chr8_1:80157916-80157935 | Msa1217670:intron | 40.0% | |
| CAGGTTTACAAGGAACTACA+TGG | - | chr8_1:80158136-80158155 | Msa1217670:intron | 40.0% | |
| AAAGATTGATCAAGAACGCG+AGG | - | chr8_1:80158267-80158286 | Msa1217670:intron | 40.0% | |
| AAGATTGATCAAGAACGCGA+GGG | - | chr8_1:80158268-80158287 | Msa1217670:intron | 40.0% | |
| CTTAAGACGGGAGAAAGATA+GGG | - | chr8_1:80158572-80158591 | Msa1217670:intron | 40.0% | |
| TGTTCGGAATATTCATGAGG+AGG | + | chr8_1:80159071-80159090 | None:intergenic | 40.0% | |
| ATGGACGGAATAAATTGGAG+AGG | - | chr8_1:80159380-80159399 | Msa1217670:intron | 40.0% | |
| TGGACGGAATAAATTGGAGA+GGG | - | chr8_1:80159381-80159400 | Msa1217670:intron | 40.0% | |
| GGAATAAATTGGAGAGGGAA+AGG | - | chr8_1:80159386-80159405 | Msa1217670:intron | 40.0% | |
| AGGTCAAGACTCGATAATAC+AGG | - | chr8_1:80159518-80159537 | Msa1217670:intron | 40.0% | |
| ! | GAGAAGAAAGTCCCCTTTTA+TGG | + | chr8_1:80159703-80159722 | None:intergenic | 40.0% |
| TCAGCGGTGCAATATTTCAA+AGG | + | chr8_1:80159776-80159795 | None:intergenic | 40.0% | |
| TGAGATGCATAGACACGTAA+TGG | - | chr8_1:80159886-80159905 | Msa1217670:intron | 40.0% | |
| TTTCCGATATCCAGATCGAT+CGG | - | chr8_1:80160262-80160281 | Msa1217670:intron | 40.0% | |
| TTTCCGATCGATCTGGATAT+CGG | + | chr8_1:80160268-80160287 | None:intergenic | 40.0% | |
| TCTTGTGCTTTCTCCAATCT+CGG | + | chr8_1:80160346-80160365 | None:intergenic | 40.0% | |
| GAGTTGAATCGCGAGAATGA+AGG | + | chr8_1:80155333-80155352 | None:intergenic | 45.0% | |
| CTCGCGATTCAACTCATTCA+AGG | - | chr8_1:80155338-80155357 | Msa1217670:CDS | 45.0% | |
| GAAGATGAAGGAAGGAAGGA+AGG | + | chr8_1:80155385-80155404 | None:intergenic | 45.0% | |
| GGCTGAGAATAGTCATTAGG+AGG | + | chr8_1:80155849-80155868 | None:intergenic | 45.0% | |
| AGCGGCTGAGAATAGTCATT+AGG | + | chr8_1:80155852-80155871 | None:intergenic | 45.0% | |
| ACTCGTGTGACAATCGGATT+TGG | - | chr8_1:80156244-80156263 | Msa1217670:intron | 45.0% | |
| ATGCTTAGCTGGTTGCACTT+GGG | + | chr8_1:80156437-80156456 | None:intergenic | 45.0% | |
| TATGCTTAGCTGGTTGCACT+TGG | + | chr8_1:80156438-80156457 | None:intergenic | 45.0% | |
| CTCAGCAAATGGCACTTGAA+TGG | + | chr8_1:80156556-80156575 | None:intergenic | 45.0% | |
| !! | CATTCAAGTGCCATTTGCTG+AGG | - | chr8_1:80156554-80156573 | Msa1217670:intron | 45.0% |
| ! | TGTGCTTGATAACATGCGGT+AGG | - | chr8_1:80156580-80156599 | Msa1217670:intron | 45.0% |
| TAGCAACCACCCACTCTTTA+AGG | - | chr8_1:80156603-80156622 | Msa1217670:intron | 45.0% | |
| TCTCAACCTTAAAGAGTGGG+TGG | + | chr8_1:80156612-80156631 | None:intergenic | 45.0% | |
| AGTGCTTCATATGCAGGTAG+TGG | - | chr8_1:80156848-80156867 | Msa1217670:intron | 45.0% | |
| GTGCTTCATATGCAGGTAGT+GGG | - | chr8_1:80156849-80156868 | Msa1217670:intron | 45.0% | |
| TGCTTCATATGCAGGTAGTG+GGG | - | chr8_1:80156850-80156869 | Msa1217670:intron | 45.0% | |
| ! | GGGGAATTCCTTTTACACTC+AGG | - | chr8_1:80157036-80157055 | Msa1217670:intron | 45.0% |
| TAGTGAGGGAAGGGATACAA+TGG | - | chr8_1:80157113-80157132 | Msa1217670:intron | 45.0% | |
| TCGTTGTTCTCATGTTTGGC+CGG | - | chr8_1:80157143-80157162 | Msa1217670:intron | 45.0% | |
| TCATGTTTGGCCGGTCAATA+TGG | - | chr8_1:80157152-80157171 | Msa1217670:intron | 45.0% | |
| CGGTCAATATGGCAAGAAAG+AGG | - | chr8_1:80157163-80157182 | Msa1217670:intron | 45.0% | |
| GTCCTGTGAAAAGGATACAG+TGG | + | chr8_1:80157340-80157359 | None:intergenic | 45.0% | |
| ! | GCCACCTCACCATGATTTTA+TGG | + | chr8_1:80157841-80157860 | None:intergenic | 45.0% |
| GCCAACCCAACTTCATTAAG+AGG | + | chr8_1:80157920-80157939 | None:intergenic | 45.0% | |
| !! | GCTTTTTCTACTACAGGCTG+AGG | - | chr8_1:80158545-80158564 | Msa1217670:intron | 45.0% |
| GCTTAAGACGGGAGAAAGAT+AGG | - | chr8_1:80158571-80158590 | Msa1217670:intron | 45.0% | |
| TAGCAATTTCTCGTGCAGTG+AGG | - | chr8_1:80159316-80159335 | Msa1217670:intron | 45.0% | |
| GTGCAGTGAGGTTGTGTTAT+AGG | - | chr8_1:80159328-80159347 | Msa1217670:intron | 45.0% | |
| ! | TTGGCTTTCTACTCCGAGAT+TGG | - | chr8_1:80160330-80160349 | Msa1217670:five_prime_UTR | 45.0% |
| !! | AAAAAAATGTAATATAATTA+GGG | + | chr8_1:80157406-80157425 | None:intergenic | 5.0% |
| ! | AGGGAACCCTAGGTTGAAGA+AGG | + | chr8_1:80155313-80155332 | None:intergenic | 50.0% |
| GAAGGAAGGAAGGAAGGGTT+GGG | + | chr8_1:80155379-80155398 | None:intergenic | 50.0% | |
| TGAAGGAAGGAAGGAAGGGT+TGG | + | chr8_1:80155380-80155399 | None:intergenic | 50.0% | |
| TCAGGACTGAATTGAGGCTC+AGG | + | chr8_1:80155659-80155678 | None:intergenic | 50.0% | |
| GCCGCTGTATGACAAGTACA+AGG | - | chr8_1:80155866-80155885 | Msa1217670:intron | 50.0% | |
| CACAAACACCGGGTATGACA+CGG | - | chr8_1:80155990-80156009 | Msa1217670:CDS | 50.0% | |
| ! | GTTGGTGTCCGAACATGTGT+CGG | - | chr8_1:80156074-80156093 | Msa1217670:CDS | 50.0% |
| TCTGGTGTCCGACACATGTT+CGG | + | chr8_1:80156085-80156104 | None:intergenic | 50.0% | |
| ACACCAGACACTCCTTCCAT+AGG | - | chr8_1:80156097-80156116 | Msa1217670:CDS | 50.0% | |
| !! | CTTCCTATGGAAGGAGTGTC+TGG | + | chr8_1:80156103-80156122 | None:intergenic | 50.0% |
| ! | GCACTGACACTTCCTATGGA+AGG | + | chr8_1:80156112-80156131 | None:intergenic | 50.0% |
| !! | TGTGGCACTGACACTTCCTA+TGG | + | chr8_1:80156116-80156135 | None:intergenic | 50.0% |
| TTGTACAACCCTGACAGCTG+AGG | - | chr8_1:80156653-80156672 | Msa1217670:intron | 50.0% | |
| GCACAATTCCTCAGCTGTCA+GGG | + | chr8_1:80156664-80156683 | None:intergenic | 50.0% | |
| AGCACAATTCCTCAGCTGTC+AGG | + | chr8_1:80156665-80156684 | None:intergenic | 50.0% | |
| ! | GCTTCATATGCAGGTAGTGG+GGG | - | chr8_1:80156851-80156870 | Msa1217670:intron | 50.0% |
| TCATCGAACCCACGTAACGT+TGG | + | chr8_1:80157243-80157262 | None:intergenic | 50.0% | |
| TAAGAGGTGGAAGTGACCTC+CGG | + | chr8_1:80157904-80157923 | None:intergenic | 50.0% | |
| !! | GTTGGCTTGCTTCCGTGATT+TGG | - | chr8_1:80157934-80157953 | Msa1217670:intron | 50.0% |
| !! | AGGCTGAGGAGTGCTTAAGA+CGG | - | chr8_1:80158559-80158578 | Msa1217670:intron | 50.0% |
| TTGGCTCACTACTAGAGTGC+AGG | + | chr8_1:80158608-80158627 | None:intergenic | 50.0% | |
| CTGCATGTTTCCGATCGATC+TGG | + | chr8_1:80160275-80160294 | None:intergenic | 50.0% | |
| CAGATCGATCGGAAACATGC+AGG | - | chr8_1:80160273-80160292 | Msa1217670:intron | 50.0% | |
| GCGAGAATGAAGGGAACCCT+AGG | + | chr8_1:80155323-80155342 | None:intergenic | 55.0% | |
| CGATGTGTCCGTGTCATACC+CGG | + | chr8_1:80156001-80156020 | None:intergenic | 55.0% | |
| !! | AGGAAGTGTCAGTGCCACAG+AGG | - | chr8_1:80156117-80156136 | Msa1217670:intron | 55.0% |
| TGGACCGCTACTTCATTGCC+CGG | - | chr8_1:80157882-80157901 | Msa1217670:CDS | 55.0% | |
| ACCTCCGGGCAATGAAGTAG+CGG | + | chr8_1:80157889-80157908 | None:intergenic | 55.0% | |
| AAGAGGTGGAAGTGACCTCC+GGG | + | chr8_1:80157903-80157922 | None:intergenic | 55.0% | |
| !! | GGCTGAGGAGTGCTTAAGAC+GGG | - | chr8_1:80158560-80158579 | Msa1217670:intron | 55.0% |
| !! | TAGTGGGGGAAGTGCCGTAG+TGG | - | chr8_1:80156865-80156884 | Msa1217670:intron | 60.0% |
| !! | AGTGGGGGAAGTGCCGTAGT+GGG | - | chr8_1:80156866-80156885 | Msa1217670:intron | 60.0% |
| ACCGCTACTTCATTGCCCGG+AGG | - | chr8_1:80157885-80157904 | Msa1217670:CDS | 60.0% | |
| CACGGACACATCGACGCCGT+TGG | - | chr8_1:80156008-80156027 | Msa1217670:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 80155257 | 80160431 | 80155257 | ID=Msa1217670;Name=Msa1217670 |
| chr8_1 | mRNA | 80155257 | 80160431 | 80155257 | ID=Msa1217670-mRNA-1;Parent=Msa1217670;Name=Msa1217670-mRNA-1;_AED=0.31;_eAED=0.31;_QI=135|0.88|0.8|1|0.88|0.8|10|0|381 |
| chr8_1 | exon | 80155257 | 80155412 | 80155257 | ID=Msa1217670-mRNA-1:exon:28028;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80155763 | 80155810 | 80155763 | ID=Msa1217670-mRNA-1:exon:28027;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80155931 | 80156116 | 80155931 | ID=Msa1217670-mRNA-1:exon:28026;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80157050 | 80157127 | 80157050 | ID=Msa1217670-mRNA-1:exon:28025;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80157214 | 80157417 | 80157214 | ID=Msa1217670-mRNA-1:exon:28024;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80157502 | 80157549 | 80157502 | ID=Msa1217670-mRNA-1:exon:28023;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80157733 | 80157918 | 80157733 | ID=Msa1217670-mRNA-1:exon:28022;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80159771 | 80159870 | 80159771 | ID=Msa1217670-mRNA-1:exon:28021;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80159989 | 80160160 | 80159989 | ID=Msa1217670-mRNA-1:exon:28020;Parent=Msa1217670-mRNA-1 |
| chr8_1 | exon | 80160329 | 80160431 | 80160329 | ID=Msa1217670-mRNA-1:exon:28019;Parent=Msa1217670-mRNA-1 |
| chr8_1 | five_prime_UTR | 80160329 | 80160431 | 80160329 | ID=Msa1217670-mRNA-1:five_prime_utr;Parent=Msa1217670-mRNA-1 |
| chr8_1 | five_prime_UTR | 80160129 | 80160160 | 80160129 | ID=Msa1217670-mRNA-1:five_prime_utr;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80159989 | 80160128 | 80159989 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80159771 | 80159870 | 80159771 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80157733 | 80157918 | 80157733 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80157502 | 80157549 | 80157502 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80157214 | 80157417 | 80157214 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80157050 | 80157127 | 80157050 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80155931 | 80156116 | 80155931 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80155763 | 80155810 | 80155763 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| chr8_1 | CDS | 80155257 | 80155412 | 80155257 | ID=Msa1217670-mRNA-1:cds;Parent=Msa1217670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
