Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969780 | KEH24765.1 | 99.487 | 585 | 3 | 0 | 1 | 585 | 28 | 612 | 0.0 | 1197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969780 | sp|B0F9L4|GOGC6_ARATH | 71.870 | 583 | 163 | 1 | 3 | 585 | 1 | 582 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969780 | A0A072UG57 | 99.487 | 585 | 3 | 0 | 1 | 585 | 28 | 612 | 0.0 | 1197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028340 | Msa0969780 | 0.804797 | 1.818140e-49 | -8.615850e-47 |
| Msa0035320 | Msa0969780 | 0.847070 | 1.458664e-59 | -8.615850e-47 |
| Msa0076170 | Msa0969780 | 0.805838 | 1.100051e-49 | -8.615850e-47 |
| Msa0116270 | Msa0969780 | 0.832674 | 8.263181e-56 | -8.615850e-47 |
| Msa0691340 | Msa0969780 | 0.835835 | 1.331529e-56 | -8.615850e-47 |
| Msa0705500 | Msa0969780 | 0.829794 | 4.215983e-55 | -8.615850e-47 |
| Msa0168570 | Msa0969780 | 0.815859 | 7.450654e-52 | -8.615850e-47 |
| Msa0222160 | Msa0969780 | 0.801126 | 1.042868e-48 | -8.615850e-47 |
| Msa0423840 | Msa0969780 | 0.824653 | 7.182126e-54 | -8.615850e-47 |
| Msa0428970 | Msa0969780 | 0.800528 | 1.381313e-48 | -8.615850e-47 |
| Msa0467310 | Msa0969780 | 0.832850 | 7.469649e-56 | -8.615850e-47 |
| Msa0473980 | Msa0969780 | 0.803231 | 3.847190e-49 | -8.615850e-47 |
| Msa0475450 | Msa0969780 | 0.807418 | 5.104969e-50 | -8.615850e-47 |
| Msa0263680 | Msa0969780 | 0.830613 | 2.661371e-55 | -8.615850e-47 |
| Msa0268110 | Msa0969780 | 0.807210 | 5.649892e-50 | -8.615850e-47 |
| Msa0969330 | Msa0969780 | 0.865542 | 5.477508e-65 | -8.615850e-47 |
| Msa0969780 | Msa1051960 | 0.815462 | 9.132281e-52 | -8.615850e-47 |
| Msa0969780 | Msa1095790 | 0.803968 | 2.705893e-49 | -8.615850e-47 |
| Msa0969780 | Msa1143710 | 0.824677 | 7.089491e-54 | -8.615850e-47 |
| Msa0969780 | Msa1237720 | 0.814997 | 1.158585e-51 | -8.615850e-47 |
| Msa0969780 | Msa1336030 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
| Msa0969780 | Msa1372790 | 0.806755 | 7.050480e-50 | -8.615850e-47 |
| Msa0969780 | Msa1377810 | 0.805814 | 1.113191e-49 | -8.615850e-47 |
| Msa0969780 | Msa1409500 | 0.811937 | 5.453770e-51 | -8.615850e-47 |
| Msa0969780 | Msa1464370 | 0.849431 | 3.248858e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969780 | MtrunA17_Chr6g0449281 | 99.487 | 585 | 3 | 0 | 1 | 585 | 1 | 585 | 0.0 | 1195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0969780 | AT3G27530.1 | 71.870 | 583 | 163 | 1 | 3 | 585 | 1 | 582 | 0.0 | 840 |
Find 131 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTTTAGTAGCAATTTAA+TGG | 0.167600 | 6_4:+1204709 | None:intergenic |
| GAATTGATGAAAATCGAAAT+TGG | 0.196919 | 6_4:+1208228 | None:intergenic |
| CTCATGGAATGAATGATTTA+TGG | 0.198357 | 6_4:+1203448 | None:intergenic |
| TATAATGTTGGGCGTCTTAA+AGG | 0.225470 | 6_4:-1206954 | Msa0969780:CDS |
| GCATCGAATGGTGAAATATT+TGG | 0.231055 | 6_4:-1201822 | Msa0969780:CDS |
| TTTAAGACGCCCAACATTAT+AGG | 0.236390 | 6_4:+1206956 | None:intergenic |
| ACTTCATTACTTGGTCCTTT+TGG | 0.236471 | 6_4:+1206399 | None:intergenic |
| CGACTTCTTCTTCAGGTTAC+AGG | 0.238704 | 6_4:-1206027 | Msa0969780:intron |
| CTTCAAAGACGACGATCTTT+TGG | 0.239201 | 6_4:+1205206 | None:intergenic |
| TGGATTAGACTTTCCATCTT+TGG | 0.240722 | 6_4:+1201778 | None:intergenic |
| GAGGATGTTCATATGTCTTT+TGG | 0.246476 | 6_4:-1203425 | Msa0969780:CDS |
| TGTTCTATCTCATATATTAA+AGG | 0.274403 | 6_4:-1203060 | Msa0969780:CDS |
| TGTCAGAAACAGTTTGTATA+AGG | 0.279252 | 6_4:-1201622 | Msa0969780:CDS |
| CCCTCTTCTTCTAAGTTTGT+TGG | 0.284008 | 6_4:-1206325 | Msa0969780:intron |
| CTTCTTGCTAGCAAAGTTCT+TGG | 0.288001 | 6_4:-1203825 | Msa0969780:CDS |
| TTATTCTAAGTATAGAATTC+AGG | 0.292435 | 6_4:+1203778 | None:intergenic |
| TCGGCTAATGGACATGCTTA+TGG | 0.304430 | 6_4:-1205973 | Msa0969780:CDS |
| AATGAATGATTTATGGAATA+TGG | 0.305224 | 6_4:+1203455 | None:intergenic |
| AAAGCTTTCCAGTTAGCATT+TGG | 0.317728 | 6_4:-1207080 | Msa0969780:CDS |
| ATTAGGCATTGAGATGTATT+GGG | 0.331445 | 6_4:-1203881 | Msa0969780:intron |
| TGTATTGGGGATTTAATTGC+TGG | 0.343320 | 6_4:-1203867 | Msa0969780:CDS |
| AAGCTTTCCAGTTAGCATTT+GGG | 0.347741 | 6_4:-1207079 | Msa0969780:CDS |
| GGAGGTTCTGAGGCTGATCC+TGG | 0.348630 | 6_4:-1204689 | Msa0969780:CDS |
| CTGGACAGTATGTTGATATT+AGG | 0.353105 | 6_4:-1204517 | Msa0969780:CDS |
| CATTAGGCATTGAGATGTAT+TGG | 0.357978 | 6_4:-1203882 | Msa0969780:intron |
| GAATCCGTGAGCTATGAAAA+TGG | 0.368721 | 6_4:-1208168 | Msa0969780:exon |
| AGGAAGCAGTGCACTGCATT+GGG | 0.369828 | 6_4:+1201692 | None:intergenic |
| CCATTGCCCCAAATGCTAAC+TGG | 0.371409 | 6_4:+1207072 | None:intergenic |
| CCGCGGTATAACTCGGCTAA+TGG | 0.379040 | 6_4:-1205985 | Msa0969780:CDS |
| ATGAAAATGGATTTAATGTC+TGG | 0.381784 | 6_4:-1208155 | Msa0969780:CDS |
| AATTGATGAAAATCGAAATT+GGG | 0.386866 | 6_4:+1208229 | None:intergenic |
| GTCAGAAACAGTTTGTATAA+GGG | 0.393928 | 6_4:-1201621 | Msa0969780:CDS |
| TCTGGTTGAACTTCATTACT+TGG | 0.403843 | 6_4:+1206390 | None:intergenic |
| ACCATTAAATTGCTACTAAA+GGG | 0.405073 | 6_4:-1204710 | Msa0969780:CDS |
| ACCGCACAGCGAACTGCAAC+AGG | 0.405621 | 6_4:+1204475 | None:intergenic |
| CAGTTAGCATTTGGGGCAAT+GGG | 0.411140 | 6_4:-1207071 | Msa0969780:intron |
| AAATAAGACAGCTCTGGTTC+AGG | 0.411566 | 6_4:-1204645 | Msa0969780:intron |
| CAAAAGATCGTCGTCTTTGA+AGG | 0.413562 | 6_4:-1205205 | Msa0969780:CDS |
| AACATACCCTTTCCTTGCAT+TGG | 0.414968 | 6_4:+1203030 | None:intergenic |
| ATAGCATTTCTTCTGTCATC+TGG | 0.415540 | 6_4:+1207134 | None:intergenic |
| AACCATTAAATTGCTACTAA+AGG | 0.420583 | 6_4:-1204711 | Msa0969780:CDS |
| TTCACCATTCGATGCATTAG+TGG | 0.421258 | 6_4:+1201830 | None:intergenic |
| TCGTAGCAATGTATCCAATC+AGG | 0.421858 | 6_4:-1205001 | Msa0969780:intron |
| AAATCAGTATTCATCAAATC+TGG | 0.425629 | 6_4:+1206372 | None:intergenic |
| CCAGTTAGCATTTGGGGCAA+TGG | 0.432100 | 6_4:-1207072 | Msa0969780:CDS |
| AGAATTCTTCAAATGAAGAT+AGG | 0.435746 | 6_4:-1207314 | Msa0969780:intron |
| AGAAGATATTCAGTATCATA+AGG | 0.439417 | 6_4:-1205174 | Msa0969780:CDS |
| CTATTACACGGTCTTACGTT+GGG | 0.442372 | 6_4:-1203220 | Msa0969780:CDS |
| GGATTTAATGTCTGGTTACA+AGG | 0.443940 | 6_4:-1208147 | Msa0969780:intron |
| TTACCTCAGCTTCACGGGTC+AGG | 0.443998 | 6_4:+1205341 | None:intergenic |
| ACCAACAAACTTAGAAGAAG+AGG | 0.450545 | 6_4:+1206324 | None:intergenic |
| TGCAGCTCCTAATGATTGCA+TGG | 0.452764 | 6_4:+1201856 | None:intergenic |
| GAGGCACCCATGCAATCATT+AGG | 0.454933 | 6_4:-1201863 | Msa0969780:CDS |
| TATTCTAAGTATAGAATTCA+GGG | 0.467808 | 6_4:+1203779 | None:intergenic |
| CTTGCAGGTTCGTGGTGCCT+TGG | 0.467862 | 6_4:-1206457 | Msa0969780:intron |
| TAGGAAGCAGTGCACTGCAT+TGG | 0.468081 | 6_4:+1201691 | None:intergenic |
| ATGTTGAGCGTTTGCTTGAT+CGG | 0.479787 | 6_4:-1207175 | Msa0969780:CDS |
| AGAACGTAATGATGTTGAAA+TGG | 0.482460 | 6_4:-1206930 | Msa0969780:intron |
| TCAAATTGTTCAGCAATTCA+AGG | 0.492873 | 6_4:+1205025 | None:intergenic |
| TATAGAATTCAGGGCAGGTT+CGG | 0.494250 | 6_4:+1203788 | None:intergenic |
| ATTGGGGCAATCTGCTAGCC+AGG | 0.501980 | 6_4:+1201709 | None:intergenic |
| TATCAATGAATCAAATCCTA+TGG | 0.502065 | 6_4:+1204893 | None:intergenic |
| TGATTTATGGAATATGGTTG+TGG | 0.502146 | 6_4:+1203461 | None:intergenic |
| AAAAGGTTACCTCAGCTTCA+CGG | 0.504484 | 6_4:+1205335 | None:intergenic |
| ACAGAGTCAACAAACCTGAT+TGG | 0.504863 | 6_4:+1204987 | None:intergenic |
| ATCTTTGGATTTCATTGAAG+AGG | 0.505262 | 6_4:+1201793 | None:intergenic |
| GATGGAAAGTCTAATCCATC+GGG | 0.505732 | 6_4:-1201773 | Msa0969780:CDS |
| TTAAGGTTCGAATCAGAAGA+AGG | 0.509770 | 6_4:+1208296 | None:intergenic |
| TAAGGTGTGGTCGAGCATCT+AGG | 0.509927 | 6_4:+1201672 | None:intergenic |
| AAAGGTTACCTCAGCTTCAC+GGG | 0.511591 | 6_4:+1205336 | None:intergenic |
| ATTATATCCTTGCAGGTTCG+TGG | 0.511699 | 6_4:-1206465 | Msa0969780:intron |
| ACTCCTATTAATCATCCAAA+AGG | 0.513136 | 6_4:-1206414 | Msa0969780:CDS |
| AGCTTTCCAGTTAGCATTTG+GGG | 0.514126 | 6_4:-1207078 | Msa0969780:CDS |
| AGTTCTTGGAGAGGAGCCGC+AGG | 0.523096 | 6_4:-1203811 | Msa0969780:CDS |
| TCTTCAATGAAATCCAAAGA+TGG | 0.523114 | 6_4:-1201791 | Msa0969780:CDS |
| TGTTTATTAGCATCTTTCCC+AGG | 0.524217 | 6_4:+1204671 | None:intergenic |
| TATTAGGTGTTGAAAGCCAA+TGG | 0.525069 | 6_4:-1204501 | Msa0969780:CDS |
| TCAGAAACAGTTTGTATAAG+GGG | 0.528109 | 6_4:-1201620 | Msa0969780:CDS |
| CTAGCTCAAGAAGATAAGTA+AGG | 0.530499 | 6_4:+1201654 | None:intergenic |
| GGATTTCATTGAAGAGGTGA+GGG | 0.532305 | 6_4:+1201799 | None:intergenic |
| CAATCTCCAATGCAAGGAAA+GGG | 0.537286 | 6_4:-1203036 | Msa0969780:intron |
| TTCAGGGCAGGTTCGGCCTG+CGG | 0.541652 | 6_4:+1203795 | None:intergenic |
| ATTCAGTATCATAAGGGAGG+AGG | 0.541955 | 6_4:-1205167 | Msa0969780:CDS |
| GCTATTACACGGTCTTACGT+TGG | 0.542590 | 6_4:-1203221 | Msa0969780:CDS |
| ACATATGAACATCCTCCTCA+TGG | 0.545850 | 6_4:+1203432 | None:intergenic |
| TGGATTTCATTGAAGAGGTG+AGG | 0.546280 | 6_4:+1201798 | None:intergenic |
| AGATGGTGGTGTAGTTGTGC+AGG | 0.546958 | 6_4:-1205137 | Msa0969780:intron |
| GCGTAGACGCTAGCATTGCT+TGG | 0.554715 | 6_4:+1203489 | None:intergenic |
| TGCACTAACAAGAGTTTCCA+AGG | 0.555234 | 6_4:+1206440 | None:intergenic |
| CAGGTGAGTAAGAAGCAGTA+AGG | 0.555424 | 6_4:+1205360 | None:intergenic |
| ACAATCTCCAATGCAAGGAA+AGG | 0.556110 | 6_4:-1203037 | Msa0969780:CDS |
| GAAGATATTCAGTATCATAA+GGG | 0.558030 | 6_4:-1205173 | Msa0969780:CDS |
| ATTAGGTGTTGAAAGCCAAT+GGG | 0.561629 | 6_4:-1204500 | Msa0969780:CDS |
| AGATGGAAAGTCTAATCCAT+CGG | 0.567871 | 6_4:-1201774 | Msa0969780:CDS |
| CTTCCAGGTGATAAGAAATG+AGG | 0.577509 | 6_4:-1205383 | Msa0969780:intron |
| TTAGGCATTGAGATGTATTG+GGG | 0.578774 | 6_4:-1203880 | Msa0969780:intron |
| GAGGTTCTGAGGCTGATCCT+GGG | 0.579669 | 6_4:-1204688 | Msa0969780:CDS |
| TGCTAGCAAAGTTCTTGGAG+AGG | 0.583453 | 6_4:-1203820 | Msa0969780:CDS |
| CCAACAAACTTAGAAGAAGA+GGG | 0.583467 | 6_4:+1206325 | None:intergenic |
| CTGTCGAGAATTACTGAGAA+GGG | 0.587231 | 6_4:+1206121 | None:intergenic |
| TTCAGTATCATAAGGGAGGA+GGG | 0.588314 | 6_4:-1205166 | Msa0969780:CDS |
| CTTACGTTGGGTGAAAATGA+TGG | 0.589032 | 6_4:-1203208 | Msa0969780:CDS |
| CTAAGTATAGAATTCAGGGC+AGG | 0.589390 | 6_4:+1203783 | None:intergenic |
| AAAGGACAATCTCCAATGCA+AGG | 0.590795 | 6_4:-1203042 | Msa0969780:CDS |
| GCTACTAAAGGGAGGTTCTG+AGG | 0.602501 | 6_4:-1204699 | Msa0969780:CDS |
| ACCTGTTGCAGTTCGCTGTG+CGG | 0.603328 | 6_4:-1204476 | Msa0969780:intron |
| GAGGAGGGAAATTCAGATGG+TGG | 0.604849 | 6_4:-1205151 | Msa0969780:CDS |
| ATTAAATTGCTACTAAAGGG+AGG | 0.604946 | 6_4:-1204707 | Msa0969780:CDS |
| GCAGCTCCTAATGATTGCAT+GGG | 0.605658 | 6_4:+1201857 | None:intergenic |
| ACTTTCAGCATGCTATTACA+CGG | 0.615199 | 6_4:-1203232 | Msa0969780:intron |
| TGAGCGTATGAATTTCCCGA+TGG | 0.618009 | 6_4:+1201758 | None:intergenic |
| TCACCTGACCCGTGAAGCTG+AGG | 0.618628 | 6_4:-1205344 | Msa0969780:intron |
| AAATCATTCATTCCATGAGG+AGG | 0.627668 | 6_4:-1203444 | Msa0969780:CDS |
| TGAAAATGATGGTGATCTTG+AGG | 0.627908 | 6_4:-1203197 | Msa0969780:intron |
| GAACTGCAACAGGTACCCAT+TGG | 0.628157 | 6_4:+1204485 | None:intergenic |
| TTGCTTGATCGGATAAACAA+TGG | 0.628755 | 6_4:-1207164 | Msa0969780:CDS |
| GATATTCAGTATCATAAGGG+AGG | 0.629554 | 6_4:-1205170 | Msa0969780:CDS |
| TCTGTCGAGAATTACTGAGA+AGG | 0.633163 | 6_4:+1206120 | None:intergenic |
| GGACATGCTTATGGATCGTG+AGG | 0.635290 | 6_4:-1205964 | Msa0969780:intron |
| CATTAGCCGAGTTATACCGC+GGG | 0.643962 | 6_4:+1205986 | None:intergenic |
| AGAACCACTAATGCATCGAA+TGG | 0.648345 | 6_4:-1201834 | Msa0969780:CDS |
| AGGGAGGAGGGAAATTCAGA+TGG | 0.650411 | 6_4:-1205154 | Msa0969780:CDS |
| CATAAATCATTCATTCCATG+AGG | 0.652425 | 6_4:-1203447 | Msa0969780:CDS |
| GGAAGCAGTGCACTGCATTG+GGG | 0.654074 | 6_4:+1201693 | None:intergenic |
| GTACTACTCAGAGAGACCAT+AGG | 0.657625 | 6_4:-1204909 | Msa0969780:CDS |
| TCAAGAAGATAAGTAAGGTG+TGG | 0.659005 | 6_4:+1201659 | None:intergenic |
| TTCTCAGTAATTCTCGACAG+AGG | 0.673788 | 6_4:-1206118 | Msa0969780:intron |
| AGGTTCGAATCAGAAGAAGG+AGG | 0.675654 | 6_4:+1208299 | None:intergenic |
| CCATTAGCCGAGTTATACCG+CGG | 0.727910 | 6_4:+1205985 | None:intergenic |
| ATTAGCCGAGTTATACCGCG+GGG | 0.773228 | 6_4:+1205987 | None:intergenic |
| TTAGCCGAGTTATACCGCGG+GGG | 0.827159 | 6_4:+1205988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATCTAAAAAC+TGG | - | chr6_4:1202401-1202420 | Msa0969780:intron | 10.0% |
| !! | AAAAAAGTTTAAGAAAAATA+AGG | + | chr6_4:1204670-1204689 | None:intergenic | 10.0% |
| !! | TCTTATCTAAATAAATTTAA+TGG | - | chr6_4:1204708-1204727 | Msa0969780:CDS | 10.0% |
| !! | AAAAAAAAACAAAACAAAAT+TGG | + | chr6_4:1205953-1205972 | None:intergenic | 10.0% |
| !!! | AAAAAATCACTTTTAGAAAA+AGG | - | chr6_4:1202187-1202206 | Msa0969780:intron | 15.0% |
| !!! | TTAGAATTTTTTTAGAAAAG+CGG | + | chr6_4:1202501-1202520 | None:intergenic | 15.0% |
| !!! | TTAATCTATTAATTTTTCAC+AGG | - | chr6_4:1202584-1202603 | Msa0969780:intron | 15.0% |
| !!! | TAATCTATTAATTTTTCACA+GGG | - | chr6_4:1202585-1202604 | Msa0969780:intron | 15.0% |
| !!! | TGAATTTTAAGTAATGTTTA+AGG | - | chr6_4:1204321-1204340 | Msa0969780:intron | 15.0% |
| !! | TAAATAAATTTAATGGTTAC+AGG | - | chr6_4:1204715-1204734 | Msa0969780:CDS | 15.0% |
| !!! | TTTTCTTTTTTCATTTCATT+TGG | + | chr6_4:1207193-1207212 | None:intergenic | 15.0% |
| !! | ATCAGATTAAATAAACTTAT+AGG | - | chr6_4:1207574-1207593 | Msa0969780:intron | 15.0% |
| !! | TCAGATTAAATAAACTTATA+GGG | - | chr6_4:1207575-1207594 | Msa0969780:intron | 15.0% |
| !! | ATCATTATGTATAAATGTAT+GGG | + | chr6_4:1207973-1207992 | None:intergenic | 15.0% |
| !! | TATCATTATGTATAAATGTA+TGG | + | chr6_4:1207974-1207993 | None:intergenic | 15.0% |
| !!! | GAAATTTTAAAAAATGTTTC+AGG | - | chr6_4:1208045-1208064 | Msa0969780:intron | 15.0% |
| !!! | TTTTTGTCTTAACACAAATT+AGG | - | chr6_4:1201683-1201702 | Msa0969780:CDS | 20.0% |
| !!! | TTTTGTCTTAACACAAATTA+GGG | - | chr6_4:1201684-1201703 | Msa0969780:CDS | 20.0% |
| !! | AATTGATGAAAATCGAAATT+GGG | + | chr6_4:1201722-1201741 | None:intergenic | 20.0% |
| !! | AATTATTGAAGAGAGTAATT+AGG | + | chr6_4:1201839-1201858 | None:intergenic | 20.0% |
| !! | AAAAAAACACTATAACAAAG+AGG | + | chr6_4:1202142-1202161 | None:intergenic | 20.0% |
| !!! | TTTGTTATAGTGTTTTTTTG+TGG | - | chr6_4:1202143-1202162 | Msa0969780:intron | 20.0% |
| !!! | TTTTTATAAACCGTAACAAA+TGG | - | chr6_4:1202557-1202576 | Msa0969780:intron | 20.0% |
| !!! | TTTTATAAACCGTAACAAAT+GGG | - | chr6_4:1202558-1202577 | Msa0969780:intron | 20.0% |
| !! | TGTTAATGTTATGTATCAAT+AGG | - | chr6_4:1202749-1202768 | Msa0969780:intron | 20.0% |
| !! | TAAAAATTAACTTATCGAAG+TGG | + | chr6_4:1203113-1203132 | None:intergenic | 20.0% |
| !! | ACAAAAAAGCCATATATTAA+AGG | + | chr6_4:1203260-1203279 | None:intergenic | 20.0% |
| !!! | AAATAGCAAATTTTTGTTTG+TGG | - | chr6_4:1203334-1203353 | Msa0969780:intron | 20.0% |
| !! | TATATAATGGTACACATATA+GGG | + | chr6_4:1203435-1203454 | None:intergenic | 20.0% |
| !! | TTATATAATGGTACACATAT+AGG | + | chr6_4:1203436-1203455 | None:intergenic | 20.0% |
| !!! | CAAGATGATATAACAATTTT+AGG | + | chr6_4:1203883-1203902 | None:intergenic | 20.0% |
| !! | TTAAAACGGTTAAAAGTAAT+GGG | + | chr6_4:1204249-1204268 | None:intergenic | 20.0% |
| !!! | ATTACTTTTAACCGTTTTAA+GGG | - | chr6_4:1204249-1204268 | Msa0969780:intron | 20.0% |
| !! | TTATAAAACTACCCTTAAAA+CGG | + | chr6_4:1204263-1204282 | None:intergenic | 20.0% |
| !!! | GTATTTCTTTTTGAAAAATG+TGG | - | chr6_4:1204351-1204370 | Msa0969780:intron | 20.0% |
| !!! | CTTAAACTTTTTTCATTATG+CGG | - | chr6_4:1204677-1204696 | Msa0969780:CDS | 20.0% |
| !!! | AATTTGCTTTATATAGCTTT+TGG | - | chr6_4:1204867-1204886 | Msa0969780:CDS | 20.0% |
| !!! | TTTTGGTCTAAATAATTCTT+TGG | - | chr6_4:1204884-1204903 | Msa0969780:CDS | 20.0% |
| !!! | TTATTCTTTTACTCAACAAA+AGG | - | chr6_4:1205104-1205123 | Msa0969780:intron | 20.0% |
| !! | AAGTATTCTTCTTGATAAAT+CGG | - | chr6_4:1205763-1205782 | Msa0969780:intron | 20.0% |
| !!! | TTTTTCTTTCTTTTTCTGAA+AGG | - | chr6_4:1205968-1205987 | Msa0969780:CDS | 20.0% |
| !! | TCAATTATTATGAAGTATGA+AGG | - | chr6_4:1206011-1206030 | Msa0969780:CDS | 20.0% |
| !! | CAATTATTATGAAGTATGAA+GGG | - | chr6_4:1206012-1206031 | Msa0969780:CDS | 20.0% |
| !! | AATTATTATGAAGTATGAAG+GGG | - | chr6_4:1206013-1206032 | Msa0969780:CDS | 20.0% |
| !! | TATTCTAAGTATAGAATTCA+GGG | + | chr6_4:1206172-1206191 | None:intergenic | 20.0% |
| !! | TTATTCTAAGTATAGAATTC+AGG | + | chr6_4:1206173-1206192 | None:intergenic | 20.0% |
| !!! | CTATACTTAGAATAATTTTG+AGG | - | chr6_4:1206178-1206197 | Msa0969780:intron | 20.0% |
| !! | AATTTAAGAGCTGATAAATT+TGG | - | chr6_4:1206332-1206351 | Msa0969780:CDS | 20.0% |
| !!! | AAGAAGCATAAATGAAAAAT+AGG | + | chr6_4:1206384-1206403 | None:intergenic | 20.0% |
| !! | AATGAATGATTTATGGAATA+TGG | + | chr6_4:1206496-1206515 | None:intergenic | 20.0% |
| !! | TAACTGAAATGTTATGATTT+AGG | + | chr6_4:1206655-1206674 | None:intergenic | 20.0% |
| !!! | TTTCATATTTCAGATTTGTT+TGG | - | chr6_4:1206813-1206832 | Msa0969780:intron | 20.0% |
| !! | TGTTCTATCTCATATATTAA+AGG | - | chr6_4:1206888-1206907 | Msa0969780:intron | 20.0% |
| !!! | CTTTATTTTACAACAAGTTT+TGG | - | chr6_4:1206970-1206989 | Msa0969780:intron | 20.0% |
| !! | TATAGATTTCTACTATAGAA+AGG | - | chr6_4:1207123-1207142 | Msa0969780:CDS | 20.0% |
| !!! | AAACAACAATTGTTGATTAA+AGG | - | chr6_4:1207549-1207568 | Msa0969780:intron | 20.0% |
| !! | CAGATTAAATAAACTTATAG+GGG | - | chr6_4:1207576-1207595 | Msa0969780:intron | 20.0% |
| !! | AAATAGCAAAAGTAACATTT+GGG | + | chr6_4:1207855-1207874 | None:intergenic | 20.0% |
| !! | AAAATAGCAAAAGTAACATT+TGG | + | chr6_4:1207856-1207875 | None:intergenic | 20.0% |
| !!! | TTACTTTTGCTATTTTTGTA+TGG | - | chr6_4:1207860-1207879 | Msa0969780:intron | 20.0% |
| !! | ATAAACTATTCATACTATTG+CGG | - | chr6_4:1207891-1207910 | Msa0969780:intron | 20.0% |
| !! | ATACATAATGATAGTATGAA+TGG | - | chr6_4:1207981-1208000 | Msa0969780:intron | 20.0% |
| !! | AGACAAAAATTCGTGTTTTA+AGG | + | chr6_4:1201672-1201691 | None:intergenic | 25.0% |
| ! | GAATTGATGAAAATCGAAAT+TGG | + | chr6_4:1201723-1201742 | None:intergenic | 25.0% |
| !! | ATGAAAATGGATTTAATGTC+TGG | - | chr6_4:1201793-1201812 | Msa0969780:CDS | 25.0% |
| !! | CAGTTATCAAAACTATTTTC+TGG | + | chr6_4:1202432-1202451 | None:intergenic | 25.0% |
| ! | AGAATTCTTCAAATGAAGAT+AGG | - | chr6_4:1202634-1202653 | Msa0969780:intron | 25.0% |
| !! | GTCAATTTTTGTCAAACTTT+TGG | - | chr6_4:1202680-1202699 | Msa0969780:intron | 25.0% |
| ! | CTTACATAAAGGATCAAAAA+CGG | + | chr6_4:1202708-1202727 | None:intergenic | 25.0% |
| ! | CACTAAGTATACTTACATAA+AGG | + | chr6_4:1202719-1202738 | None:intergenic | 25.0% |
| !! | ACAATTTGTTTGAGAGAAAA+GGG | + | chr6_4:1202908-1202927 | None:intergenic | 25.0% |
| !! | AACAATTTGTTTGAGAGAAA+AGG | + | chr6_4:1202909-1202928 | None:intergenic | 25.0% |
| ! | AAAATAGACGGTAAACATAA+CGG | + | chr6_4:1203059-1203078 | None:intergenic | 25.0% |
| ! | CAGCAAAAAACAAAAATAGA+CGG | + | chr6_4:1203071-1203090 | None:intergenic | 25.0% |
| ! | AATACGACAATAGATGAAAA+AGG | - | chr6_4:1203132-1203151 | Msa0969780:intron | 25.0% |
| ! | ATACGACAATAGATGAAAAA+GGG | - | chr6_4:1203133-1203152 | Msa0969780:intron | 25.0% |
| ! | GATTATTAGATTCATAACTC+AGG | - | chr6_4:1203204-1203223 | Msa0969780:CDS | 25.0% |
| ! | TTGATACAGCCTTTAATATA+TGG | - | chr6_4:1203248-1203267 | Msa0969780:intron | 25.0% |
| !! | TTTGTTTACCAATTTGGAAT+TGG | - | chr6_4:1203275-1203294 | Msa0969780:intron | 25.0% |
| ! | AAATCAGTATTCATCAAATC+TGG | + | chr6_4:1203579-1203598 | None:intergenic | 25.0% |
| ! | AATTCCATTACCAAAATCAT+GGG | - | chr6_4:1203650-1203669 | Msa0969780:intron | 25.0% |
| !!! | TTTCCTTTGTATATTTTGAC+AGG | - | chr6_4:1203756-1203775 | Msa0969780:CDS | 25.0% |
| !! | TATTAGTTTACTAGTTTCCT+AGG | - | chr6_4:1203853-1203872 | Msa0969780:CDS | 25.0% |
| !!! | TAACAATTTTAGGAATACCT+AGG | + | chr6_4:1203873-1203892 | None:intergenic | 25.0% |
| ! | AATTGTTATATCATCTTGCT+TGG | - | chr6_4:1203885-1203904 | Msa0969780:intron | 25.0% |
| ! | CTTAAAACGGTTAAAAGTAA+TGG | + | chr6_4:1204250-1204269 | None:intergenic | 25.0% |
| !!! | CATTACTTTTAACCGTTTTA+AGG | - | chr6_4:1204248-1204267 | Msa0969780:intron | 25.0% |
| ! | AATCAACAAGTAATTATGAC+TGG | + | chr6_4:1204505-1204524 | None:intergenic | 25.0% |
| ! | TAAGAAAAATAAGGTGAAGT+GGG | + | chr6_4:1204661-1204680 | None:intergenic | 25.0% |
| ! | TTAAGAAAAATAAGGTGAAG+TGG | + | chr6_4:1204662-1204681 | None:intergenic | 25.0% |
| ! | AGAAGATATTCAGTATCATA+AGG | - | chr6_4:1204774-1204793 | Msa0969780:intron | 25.0% |
| ! | GAAGATATTCAGTATCATAA+GGG | - | chr6_4:1204775-1204794 | Msa0969780:intron | 25.0% |
| ! | AGTTGAAATCAGTATTAATC+AGG | + | chr6_4:1205006-1205025 | None:intergenic | 25.0% |
| ! | TATCAATGAATCAAATCCTA+TGG | + | chr6_4:1205058-1205077 | None:intergenic | 25.0% |
| ! | ATAACAAGAGTTAGCTATAA+GGG | + | chr6_4:1205174-1205193 | None:intergenic | 25.0% |
| ! | TATAACAAGAGTTAGCTATA+AGG | + | chr6_4:1205175-1205194 | None:intergenic | 25.0% |
| ! | AACCATTAAATTGCTACTAA+AGG | - | chr6_4:1205237-1205256 | Msa0969780:intron | 25.0% |
| ! | ACCATTAAATTGCTACTAAA+GGG | - | chr6_4:1205238-1205257 | Msa0969780:intron | 25.0% |
| ! | TCACTTTGTCATTACTTAAA+AGG | + | chr6_4:1205681-1205700 | None:intergenic | 25.0% |
| !! | TCATTGAATCCAATTTTCTT+TGG | - | chr6_4:1205819-1205838 | Msa0969780:intron | 25.0% |
| ! | CATATGAAACCAAAGAAAAT+TGG | + | chr6_4:1205831-1205850 | None:intergenic | 25.0% |
| !! | TGTTTTCAAAAACTTTTGTG+AGG | - | chr6_4:1206236-1206255 | Msa0969780:intron | 25.0% |
| ! | TAGATAACGTTAATCAAGAA+AGG | + | chr6_4:1206419-1206438 | None:intergenic | 25.0% |
| ! | GAAACAAATAACGAAGTTAA+AGG | + | chr6_4:1206696-1206715 | None:intergenic | 25.0% |
| !! | TTTGGAGTAAAAGCTTAAAT+TGG | + | chr6_4:1207175-1207194 | None:intergenic | 25.0% |
| ! | TTCAGATTGAGAAATTAGTT+AGG | - | chr6_4:1207268-1207287 | Msa0969780:intron | 25.0% |
| ! | GTTCTTATGAATTTACTTGA+AGG | - | chr6_4:1207825-1207844 | Msa0969780:intron | 25.0% |
| ! | TAGTATGAATGGTAAGATTA+AGG | - | chr6_4:1207992-1208011 | Msa0969780:intron | 25.0% |
| !!! | AGCTATTATTTTGAAATTGC+TGG | - | chr6_4:1208213-1208232 | Msa0969780:five_prime_UTR | 25.0% |
| !!! | CGATTTTGTTTTCTTCTTCA+AGG | - | chr6_4:1201758-1201777 | Msa0969780:CDS | 30.0% |
| ! | AAATCCATTTTCATAGCTCA+CGG | + | chr6_4:1201787-1201806 | None:intergenic | 30.0% |
| !! | ATCACTTTTAGAAAAAGGTG+TGG | - | chr6_4:1202192-1202211 | Msa0969780:intron | 30.0% |
| TAATTGTAGATTCTGTAGTG+AGG | - | chr6_4:1202251-1202270 | Msa0969780:intron | 30.0% | |
| GTAATGCTTTGATCGAAATA+TGG | - | chr6_4:1202277-1202296 | Msa0969780:intron | 30.0% | |
| ! | GATTAAGAACCCATTTGTTA+CGG | + | chr6_4:1202570-1202589 | None:intergenic | 30.0% |
| TATGTTTGATGCATCTTTGT+AGG | - | chr6_4:1202965-1202984 | Msa0969780:intron | 30.0% | |
| ! | TGTAGGTTTTCCTATAATGT+TGG | - | chr6_4:1202982-1203001 | Msa0969780:intron | 30.0% |
| ! | GTAGGTTTTCCTATAATGTT+GGG | - | chr6_4:1202983-1203002 | Msa0969780:intron | 30.0% |
| AGAACGTAATGATGTTGAAA+TGG | - | chr6_4:1203018-1203037 | Msa0969780:intron | 30.0% | |
| AAATAGACGGTAAACATAAC+GGG | + | chr6_4:1203058-1203077 | None:intergenic | 30.0% | |
| !!! | GGCTTTTTTGTTTACCAATT+TGG | - | chr6_4:1203269-1203288 | Msa0969780:intron | 30.0% |
| !! | CAGTAGGACTTGTTATATAA+TGG | + | chr6_4:1203448-1203467 | None:intergenic | 30.0% |
| CATTATATAACAAGTCCTAC+TGG | - | chr6_4:1203446-1203465 | Msa0969780:CDS | 30.0% | |
| ATTGGAAATTATATCCTTGC+AGG | - | chr6_4:1203476-1203495 | Msa0969780:CDS | 30.0% | |
| ACTCCTATTAATCATCCAAA+AGG | - | chr6_4:1203534-1203553 | Msa0969780:intron | 30.0% | |
| GAATTCCATTACCAAAATCA+TGG | - | chr6_4:1203649-1203668 | Msa0969780:intron | 30.0% | |
| CTTCCTGTCAAAATATACAA+AGG | + | chr6_4:1203762-1203781 | None:intergenic | 30.0% | |
| !!! | TTGTATATTTTGACAGGAAG+AGG | - | chr6_4:1203762-1203781 | Msa0969780:CDS | 30.0% |
| TTATATCATCTTGCTTGGAA+AGG | - | chr6_4:1203890-1203909 | Msa0969780:intron | 30.0% | |
| ACATTTCTGTTAGAGCAAAA+AGG | + | chr6_4:1204633-1204652 | None:intergenic | 30.0% | |
| AAGAAAAATAAGGTGAAGTG+GGG | + | chr6_4:1204660-1204679 | None:intergenic | 30.0% | |
| !!! | TAATTCTTTGGTCACTTTTC+AGG | - | chr6_4:1204896-1204915 | Msa0969780:CDS | 30.0% |
| TCAAATTGTTCAGCAATTCA+AGG | + | chr6_4:1204926-1204945 | None:intergenic | 30.0% | |
| !! | ATACTGATTTCAACTATACG+TGG | - | chr6_4:1205011-1205030 | Msa0969780:CDS | 30.0% |
| !!! | ATATTGATTTTGAAGCTGAG+AGG | - | chr6_4:1205075-1205094 | Msa0969780:intron | 30.0% |
| ! | TCTTTTACTCAACAAAAGGT+TGG | - | chr6_4:1205108-1205127 | Msa0969780:intron | 30.0% |
| TCCCTTTAGTAGCAATTTAA+TGG | + | chr6_4:1205242-1205261 | None:intergenic | 30.0% | |
| ATTAAATTGCTACTAAAGGG+AGG | - | chr6_4:1205241-1205260 | Msa0969780:intron | 30.0% | |
| ! | GAACTTATACTTCTGTTTTG+TGG | - | chr6_4:1205387-1205406 | Msa0969780:intron | 30.0% |
| TTACAAATGACATCTAGACA+TGG | - | chr6_4:1205624-1205643 | Msa0969780:intron | 30.0% | |
| TATTCTTCTTGATAAATCGG+TGG | - | chr6_4:1205766-1205785 | Msa0969780:intron | 30.0% | |
| TTGATGAACTTTCTCTCATT+AGG | - | chr6_4:1206050-1206069 | Msa0969780:intron | 30.0% | |
| !! | ATTAGGCATTGAGATGTATT+GGG | - | chr6_4:1206067-1206086 | Msa0969780:intron | 30.0% |
| !! | GTTTTTGAAAACATCATCAG+CGG | + | chr6_4:1206229-1206248 | None:intergenic | 30.0% |
| ! | TTCAAAAACTTTTGTGAGGT+TGG | - | chr6_4:1206240-1206259 | Msa0969780:intron | 30.0% |
| CTAAATCAGAAAAATGCTGA+TGG | - | chr6_4:1206436-1206455 | Msa0969780:CDS | 30.0% | |
| TGATTTATGGAATATGGTTG+TGG | + | chr6_4:1206490-1206509 | None:intergenic | 30.0% | |
| CTCATGGAATGAATGATTTA+TGG | + | chr6_4:1206503-1206522 | None:intergenic | 30.0% | |
| CATAAATCATTCATTCCATG+AGG | - | chr6_4:1206501-1206520 | Msa0969780:intron | 30.0% | |
| ! | ATGTTCATATGTCTTTTGGA+AGG | - | chr6_4:1206527-1206546 | Msa0969780:intron | 30.0% |
| !!! | TTTTGGAAGGTTTGTTTTGT+TGG | - | chr6_4:1206540-1206559 | Msa0969780:intron | 30.0% |
| !! | TTTTGTTGGTTGTGCTTTAA+TGG | - | chr6_4:1206554-1206573 | Msa0969780:intron | 30.0% |
| ! | TCAGATTTGTTTGGATTATC+TGG | - | chr6_4:1206822-1206841 | Msa0969780:intron | 30.0% |
| AAGCTAAAAATGCAATGAAG+CGG | + | chr6_4:1206953-1206972 | None:intergenic | 30.0% | |
| TTTCTGTGAAAGAAGCTAAT+AGG | - | chr6_4:1207298-1207317 | Msa0969780:intron | 30.0% | |
| TCCATTCAACTACTAACAAA+GGG | + | chr6_4:1207376-1207395 | None:intergenic | 30.0% | |
| TTCCATTCAACTACTAACAA+AGG | + | chr6_4:1207377-1207396 | None:intergenic | 30.0% | |
| GTAAAACTTGCACTAACAAA+AGG | + | chr6_4:1207717-1207736 | None:intergenic | 30.0% | |
| CTAGAGCAAAATAAACCAAT+AGG | + | chr6_4:1207941-1207960 | None:intergenic | 30.0% | |
| TGAATGGTAAGATTAAGGAA+AGG | - | chr6_4:1207997-1208016 | Msa0969780:intron | 30.0% | |
| GAAAGGAAGAAGTGAAATTT+AGG | - | chr6_4:1208014-1208033 | Msa0969780:intron | 30.0% | |
| ATCTTTGGATTTCATTGAAG+AGG | + | chr6_4:1208158-1208177 | None:intergenic | 30.0% | |
| TCTTCAATGAAATCCAAAGA+TGG | - | chr6_4:1208157-1208176 | Msa0969780:CDS | 30.0% | |
| TGTCAGAAACAGTTTGTATA+AGG | - | chr6_4:1208326-1208345 | Msa0969780:five_prime_UTR | 30.0% | |
| GTCAGAAACAGTTTGTATAA+GGG | - | chr6_4:1208327-1208346 | Msa0969780:five_prime_UTR | 30.0% | |
| TCAGAAACAGTTTGTATAAG+GGG | - | chr6_4:1208328-1208347 | Msa0969780:five_prime_UTR | 30.0% | |
| TTAAGGTTCGAATCAGAAGA+AGG | + | chr6_4:1201655-1201674 | None:intergenic | 35.0% | |
| GGATTTAATGTCTGGTTACA+AGG | - | chr6_4:1201801-1201820 | Msa0969780:CDS | 35.0% | |
| ACAGTGATCATGACTAGATT+AGG | - | chr6_4:1201923-1201942 | Msa0969780:intron | 35.0% | |
| CAGTGATCATGACTAGATTA+GGG | - | chr6_4:1201924-1201943 | Msa0969780:intron | 35.0% | |
| AAGGTGTGGAAAATAAGCTT+AGG | - | chr6_4:1202206-1202225 | Msa0969780:intron | 35.0% | |
| ! | TGGTTTGCAATTGAACATTC+TGG | - | chr6_4:1202297-1202316 | Msa0969780:intron | 35.0% |
| ! | TTTTCTCACCAAGTGAAAGT+CGG | + | chr6_4:1202342-1202361 | None:intergenic | 35.0% |
| !!! | AATTTTTCACAGGGTGTTGT+TGG | - | chr6_4:1202594-1202613 | Msa0969780:intron | 35.0% |
| TTGCTTGATCGGATAAACAA+TGG | - | chr6_4:1202784-1202803 | Msa0969780:intron | 35.0% | |
| ATAGCATTTCTTCTGTCATC+TGG | + | chr6_4:1202817-1202836 | None:intergenic | 35.0% | |
| AAAGCTTTCCAGTTAGCATT+TGG | - | chr6_4:1202868-1202887 | Msa0969780:intron | 35.0% | |
| AAGCTTTCCAGTTAGCATTT+GGG | - | chr6_4:1202869-1202888 | Msa0969780:intron | 35.0% | |
| ! | TTTAAGACGCCCAACATTAT+AGG | + | chr6_4:1202995-1203014 | None:intergenic | 35.0% |
| TATAATGTTGGGCGTCTTAA+AGG | - | chr6_4:1202994-1203013 | Msa0969780:intron | 35.0% | |
| AATAGACGGTAAACATAACG+GGG | + | chr6_4:1203057-1203076 | None:intergenic | 35.0% | |
| !!! | TTGCTGTTTCTGTGTTTTCA+AGG | - | chr6_4:1203085-1203104 | Msa0969780:intron | 35.0% |
| CCACAATACCAATTCCAAAT+TGG | + | chr6_4:1203286-1203305 | None:intergenic | 35.0% | |
| ! | CCAATTTGGAATTGGTATTG+TGG | - | chr6_4:1203283-1203302 | Msa0969780:intron | 35.0% |
| AATGGTACACATATAGGGAA+AGG | + | chr6_4:1203430-1203449 | None:intergenic | 35.0% | |
| !! | TTTCCAATTAACTTGCCAGT+AGG | + | chr6_4:1203464-1203483 | None:intergenic | 35.0% |
| ! | GGTCCTTTTGGATGATTAAT+AGG | + | chr6_4:1203540-1203559 | None:intergenic | 35.0% |
| ! | ACTTCATTACTTGGTCCTTT+TGG | + | chr6_4:1203552-1203571 | None:intergenic | 35.0% |
| TCTGGTTGAACTTCATTACT+TGG | + | chr6_4:1203561-1203580 | None:intergenic | 35.0% | |
| CCAACAAACTTAGAAGAAGA+GGG | + | chr6_4:1203626-1203645 | None:intergenic | 35.0% | |
| ACCAACAAACTTAGAAGAAG+AGG | + | chr6_4:1203627-1203646 | None:intergenic | 35.0% | |
| !! | ACATCCCATGATTTTGGTAA+TGG | + | chr6_4:1203657-1203676 | None:intergenic | 35.0% |
| ! | GAGAATACATCCCATGATTT+TGG | + | chr6_4:1203663-1203682 | None:intergenic | 35.0% |
| !!! | TGAAAGTGTCCTGTACTTTT+AGG | - | chr6_4:1203694-1203713 | Msa0969780:intron | 35.0% |
| AGAAAAATAAGGTGAAGTGG+GGG | + | chr6_4:1204659-1204678 | None:intergenic | 35.0% | |
| GATATTCAGTATCATAAGGG+AGG | - | chr6_4:1204778-1204797 | Msa0969780:intron | 35.0% | |
| ATTTCAACTATACGTGGTTC+AGG | - | chr6_4:1205017-1205036 | Msa0969780:CDS | 35.0% | |
| TGAGTAGATTGATTGTCTAC+TGG | + | chr6_4:1205207-1205226 | None:intergenic | 35.0% | |
| TGTTTATTAGCATCTTTCCC+AGG | + | chr6_4:1205280-1205299 | None:intergenic | 35.0% | |
| ACAGAAAAATAAGACAGCTC+TGG | - | chr6_4:1205297-1205316 | Msa0969780:intron | 35.0% | |
| ! | TGATGATGATTGCATAGATG+AGG | - | chr6_4:1205350-1205369 | Msa0969780:CDS | 35.0% |
| GTGGAATTGCATGTAGAAAA+AGG | - | chr6_4:1205406-1205425 | Msa0969780:intron | 35.0% | |
| ! | TTGCATGTAGAAAAAGGTAC+TGG | - | chr6_4:1205412-1205431 | Msa0969780:intron | 35.0% |
| CTGGACAGTATGTTGATATT+AGG | - | chr6_4:1205431-1205450 | Msa0969780:intron | 35.0% | |
| !! | TATTAGGTGTTGAAAGCCAA+TGG | - | chr6_4:1205447-1205466 | Msa0969780:intron | 35.0% |
| !! | ATTAGGTGTTGAAAGCCAAT+GGG | - | chr6_4:1205448-1205467 | Msa0969780:intron | 35.0% |
| ATAGAACAGAAACTGGGAAA+GGG | + | chr6_4:1205921-1205940 | None:intergenic | 35.0% | |
| !! | CATTAGGCATTGAGATGTAT+TGG | - | chr6_4:1206066-1206085 | Msa0969780:intron | 35.0% |
| !! | TTAGGCATTGAGATGTATTG+GGG | - | chr6_4:1206068-1206087 | Msa0969780:intron | 35.0% |
| TGTATTGGGGATTTAATTGC+TGG | - | chr6_4:1206081-1206100 | Msa0969780:intron | 35.0% | |
| AAATCATTCATTCCATGAGG+AGG | - | chr6_4:1206504-1206523 | Msa0969780:intron | 35.0% | |
| ! | GAGGATGTTCATATGTCTTT+TGG | - | chr6_4:1206523-1206542 | Msa0969780:intron | 35.0% |
| ACTTTCAGCATGCTATTACA+CGG | - | chr6_4:1206716-1206735 | Msa0969780:intron | 35.0% | |
| ! | TGAAAATGATGGTGATCTTG+AGG | - | chr6_4:1206751-1206770 | Msa0969780:intron | 35.0% |
| AGCTAAAAATGCAATGAAGC+GGG | + | chr6_4:1206952-1206971 | None:intergenic | 35.0% | |
| ! | GTCTCGACTCTCTAATTTTA+AGG | - | chr6_4:1207215-1207234 | Msa0969780:intron | 35.0% |
| TCCCTTTGTTAGTAGTTGAA+TGG | - | chr6_4:1207372-1207391 | Msa0969780:intron | 35.0% | |
| ! | GGAAATTTTGTGACACCATT+TGG | - | chr6_4:1207393-1207412 | Msa0969780:intron | 35.0% |
| ! | TTTTGCGTACTGTATCTTGT+TGG | - | chr6_4:1207459-1207478 | Msa0969780:intron | 35.0% |
| TTTGCGTACTGTATCTTGTT+GGG | - | chr6_4:1207460-1207479 | Msa0969780:intron | 35.0% | |
| !!! | GTCAATGCACTTATTTTTGC+TGG | - | chr6_4:1207496-1207515 | Msa0969780:intron | 35.0% |
| GCATCAATAAATACTCTCAC+CGG | - | chr6_4:1207678-1207697 | Msa0969780:intron | 35.0% | |
| ! | GAGAAAGATGAAAAGCATGA+TGG | + | chr6_4:1207765-1207784 | None:intergenic | 35.0% |
| GCATCGAATGGTGAAATATT+TGG | - | chr6_4:1208126-1208145 | Msa0969780:intron | 35.0% | |
| ! | TGGATTAGACTTTCCATCTT+TGG | + | chr6_4:1208173-1208192 | None:intergenic | 35.0% |
| AGATGGAAAGTCTAATCCAT+CGG | - | chr6_4:1208174-1208193 | Msa0969780:exon | 35.0% | |
| !!! | TTTTGAAATTGCTGGTTACC+TGG | - | chr6_4:1208221-1208240 | Msa0969780:five_prime_UTR | 35.0% |
| TCAAGAAGATAAGTAAGGTG+TGG | + | chr6_4:1208292-1208311 | None:intergenic | 35.0% | |
| CTAGCTCAAGAAGATAAGTA+AGG | + | chr6_4:1208297-1208316 | None:intergenic | 35.0% | |
| GAATCCGTGAGCTATGAAAA+TGG | - | chr6_4:1201780-1201799 | Msa0969780:CDS | 40.0% | |
| GTGTGGAAAATAAGCTTAGG+TGG | - | chr6_4:1202209-1202228 | Msa0969780:intron | 40.0% | |
| ! | TCACTTGGTGAGAAAAGACT+TGG | - | chr6_4:1202346-1202365 | Msa0969780:intron | 40.0% |
| !!! | GGTGTTGTTGGACTTGTTTT+TGG | - | chr6_4:1202606-1202625 | Msa0969780:intron | 40.0% |
| ATGTTGAGCGTTTGCTTGAT+CGG | - | chr6_4:1202773-1202792 | Msa0969780:intron | 40.0% | |
| AGCTTTCCAGTTAGCATTTG+GGG | - | chr6_4:1202870-1202889 | Msa0969780:intron | 40.0% | |
| ! | TTGATAGAGAGTGTAGAACG+AGG | + | chr6_4:1203403-1203422 | None:intergenic | 40.0% |
| GTACACATATAGGGAAAGGA+TGG | + | chr6_4:1203426-1203445 | None:intergenic | 40.0% | |
| AGTCCTACTGGCAAGTTAAT+TGG | - | chr6_4:1203458-1203477 | Msa0969780:CDS | 40.0% | |
| ATTATATCCTTGCAGGTTCG+TGG | - | chr6_4:1203483-1203502 | Msa0969780:CDS | 40.0% | |
| TGCACTAACAAGAGTTTCCA+AGG | + | chr6_4:1203511-1203530 | None:intergenic | 40.0% | |
| CCCTCTTCTTCTAAGTTTGT+TGG | - | chr6_4:1203623-1203642 | Msa0969780:intron | 40.0% | |
| ! | ATGCACAAGCCTAAAAGTAC+AGG | + | chr6_4:1203706-1203725 | None:intergenic | 40.0% |
| CTGTCGAGAATTACTGAGAA+GGG | + | chr6_4:1203830-1203849 | None:intergenic | 40.0% | |
| TCTGTCGAGAATTACTGAGA+AGG | + | chr6_4:1203831-1203850 | None:intergenic | 40.0% | |
| TTCTCAGTAATTCTCGACAG+AGG | - | chr6_4:1203830-1203849 | Msa0969780:CDS | 40.0% | |
| CTGTAACCTGAAGAAGAAGT+CGG | + | chr6_4:1203923-1203942 | None:intergenic | 40.0% | |
| GGAAATCTCTGTTGTCAAAG+CGG | + | chr6_4:1204484-1204503 | None:intergenic | 40.0% | |
| ATGATCACTGTTTACCTTCC+AGG | - | chr6_4:1204550-1204569 | Msa0969780:intron | 40.0% | |
| CTCATTTCTTATCACCTGGA+AGG | + | chr6_4:1204567-1204586 | None:intergenic | 40.0% | |
| CTTCCAGGTGATAAGAAATG+AGG | - | chr6_4:1204565-1204584 | Msa0969780:intron | 40.0% | |
| AAAAGGTTACCTCAGCTTCA+CGG | + | chr6_4:1204616-1204635 | None:intergenic | 40.0% | |
| ! | CTTCAAAGACGACGATCTTT+TGG | + | chr6_4:1204745-1204764 | None:intergenic | 40.0% |
| CAAAAGATCGTCGTCTTTGA+AGG | - | chr6_4:1204743-1204762 | Msa0969780:intron | 40.0% | |
| ATTCAGTATCATAAGGGAGG+AGG | - | chr6_4:1204781-1204800 | Msa0969780:intron | 40.0% | |
| TTCAGTATCATAAGGGAGGA+GGG | - | chr6_4:1204782-1204801 | Msa0969780:intron | 40.0% | |
| TCGTAGCAATGTATCCAATC+AGG | - | chr6_4:1204947-1204966 | Msa0969780:intron | 40.0% | |
| ACAGAGTCAACAAACCTGAT+TGG | + | chr6_4:1204964-1204983 | None:intergenic | 40.0% | |
| AGATTGATTGTCTACTGGCA+TGG | + | chr6_4:1205202-1205221 | None:intergenic | 40.0% | |
| ! | AAATAAGACAGCTCTGGTTC+AGG | - | chr6_4:1205303-1205322 | Msa0969780:intron | 40.0% |
| ATAGATGAGGAATCTGCTTC+TGG | - | chr6_4:1205363-1205382 | Msa0969780:CDS | 40.0% | |
| ACGTGTCTATACATTGTGAG+AGG | + | chr6_4:1205510-1205529 | None:intergenic | 40.0% | |
| CTCACAATGTATAGACACGT+CGG | - | chr6_4:1205510-1205529 | Msa0969780:intron | 40.0% | |
| AAGCTACTATCACTCATGCA+TGG | + | chr6_4:1205707-1205726 | None:intergenic | 40.0% | |
| CTTGATAAATCGGTGGAACT+TGG | - | chr6_4:1205773-1205792 | Msa0969780:intron | 40.0% | |
| CATAGAACAGAAACTGGGAA+AGG | + | chr6_4:1205922-1205941 | None:intergenic | 40.0% | |
| CTTTCCCAGTTTCTGTTCTA+TGG | - | chr6_4:1205920-1205939 | Msa0969780:intron | 40.0% | |
| GATGCCATAGAACAGAAACT+GGG | + | chr6_4:1205927-1205946 | None:intergenic | 40.0% | |
| TGATGCCATAGAACAGAAAC+TGG | + | chr6_4:1205928-1205947 | None:intergenic | 40.0% | |
| CTTCTTGCTAGCAAAGTTCT+TGG | - | chr6_4:1206123-1206142 | Msa0969780:CDS | 40.0% | |
| TATAGAATTCAGGGCAGGTT+CGG | + | chr6_4:1206163-1206182 | None:intergenic | 40.0% | |
| CTAAGTATAGAATTCAGGGC+AGG | + | chr6_4:1206168-1206187 | None:intergenic | 40.0% | |
| ACATATGAACATCCTCCTCA+TGG | + | chr6_4:1206519-1206538 | None:intergenic | 40.0% | |
| CTATTACACGGTCTTACGTT+GGG | - | chr6_4:1206728-1206747 | Msa0969780:intron | 40.0% | |
| CTTACGTTGGGTGAAAATGA+TGG | - | chr6_4:1206740-1206759 | Msa0969780:intron | 40.0% | |
| AAAGGACAATCTCCAATGCA+AGG | - | chr6_4:1206906-1206925 | Msa0969780:intron | 40.0% | |
| ACAATCTCCAATGCAAGGAA+AGG | - | chr6_4:1206911-1206930 | Msa0969780:intron | 40.0% | |
| CAATCTCCAATGCAAGGAAA+GGG | - | chr6_4:1206912-1206931 | Msa0969780:intron | 40.0% | |
| AACATACCCTTTCCTTGCAT+TGG | + | chr6_4:1206921-1206940 | None:intergenic | 40.0% | |
| GCTAAAAATGCAATGAAGCG+GGG | + | chr6_4:1206951-1206970 | None:intergenic | 40.0% | |
| GGGAGACACAATTTACCAAA+TGG | + | chr6_4:1207411-1207430 | None:intergenic | 40.0% | |
| AACTTGCACTAACAAAAGGC+AGG | + | chr6_4:1207713-1207732 | None:intergenic | 40.0% | |
| CCAATAGGTAAACACTGATG+TGG | + | chr6_4:1207926-1207945 | None:intergenic | 40.0% | |
| CCACATCAGTGTTTACCTAT+TGG | - | chr6_4:1207923-1207942 | Msa0969780:intron | 40.0% | |
| ! | GGTTTTGCGAATTGAAATCG+AGG | - | chr6_4:1208066-1208085 | Msa0969780:intron | 40.0% |
| AGAACCACTAATGCATCGAA+TGG | - | chr6_4:1208114-1208133 | Msa0969780:intron | 40.0% | |
| TTCACCATTCGATGCATTAG+TGG | + | chr6_4:1208121-1208140 | None:intergenic | 40.0% | |
| GGATTTCATTGAAGAGGTGA+GGG | + | chr6_4:1208152-1208171 | None:intergenic | 40.0% | |
| TGGATTTCATTGAAGAGGTG+AGG | + | chr6_4:1208153-1208172 | None:intergenic | 40.0% | |
| GATGGAAAGTCTAATCCATC+GGG | - | chr6_4:1208175-1208194 | Msa0969780:exon | 40.0% | |
| AGGTTCGAATCAGAAGAAGG+AGG | + | chr6_4:1201652-1201671 | None:intergenic | 45.0% | |
| CCAAGTGAAAGTCGGCTAAA+TGG | + | chr6_4:1202334-1202353 | None:intergenic | 45.0% | |
| ! | CCATTTAGCCGACTTTCACT+TGG | - | chr6_4:1202331-1202350 | Msa0969780:intron | 45.0% |
| ! | CAGTTAGCATTTGGGGCAAT+GGG | - | chr6_4:1202877-1202896 | Msa0969780:intron | 45.0% |
| ! | AGAGAGTGTAGAACGAGGAA+TGG | + | chr6_4:1203398-1203417 | None:intergenic | 45.0% |
| CCTGAAGAAGAAGTCGGTAA+GGG | + | chr6_4:1203917-1203936 | None:intergenic | 45.0% | |
| ACCTGAAGAAGAAGTCGGTA+AGG | + | chr6_4:1203918-1203937 | None:intergenic | 45.0% | |
| ! | CGACTTCTTCTTCAGGTTAC+AGG | - | chr6_4:1203921-1203940 | Msa0969780:intron | 45.0% |
| ! | ACTATATTGACTATCCCCCG+CGG | - | chr6_4:1203946-1203965 | Msa0969780:intron | 45.0% |
| ! | TCGGCTAATGGACATGCTTA+TGG | - | chr6_4:1203975-1203994 | Msa0969780:intron | 45.0% |
| TCCAGCTCTGTTGTCAATAG+CGG | - | chr6_4:1204074-1204093 | Msa0969780:intron | 45.0% | |
| !!! | TTTTTTCCGCTCCGCTATAG+CGG | + | chr6_4:1204109-1204128 | None:intergenic | 45.0% |
| ! | CTAGCCGTGATGGAAAAAAG+CGG | - | chr6_4:1204143-1204162 | Msa0969780:intron | 45.0% |
| AGGCCTCATTTCTTATCACC+TGG | + | chr6_4:1204571-1204590 | None:intergenic | 45.0% | |
| CAGGTGAGTAAGAAGCAGTA+AGG | + | chr6_4:1204591-1204610 | None:intergenic | 45.0% | |
| AAAGGTTACCTCAGCTTCAC+GGG | + | chr6_4:1204615-1204634 | None:intergenic | 45.0% | |
| GTACTACTCAGAGAGACCAT+AGG | - | chr6_4:1205039-1205058 | Msa0969780:intron | 45.0% | |
| GTGGAACTTGGAGTCTACTT+GGG | - | chr6_4:1205785-1205804 | Msa0969780:intron | 45.0% | |
| ACAGAAACTGGGAAAGGGAA+AGG | + | chr6_4:1205916-1205935 | None:intergenic | 45.0% | |
| TGCTAGCAAAGTTCTTGGAG+AGG | - | chr6_4:1206128-1206147 | Msa0969780:CDS | 45.0% | |
| GCTATTACACGGTCTTACGT+TGG | - | chr6_4:1206727-1206746 | Msa0969780:intron | 45.0% | |
| ! | TACCGACACAGGAAAAGCAT+GGG | + | chr6_4:1207431-1207450 | None:intergenic | 45.0% |
| !! | CTTTTCCTGTGTCGGTAGTT+GGG | - | chr6_4:1207434-1207453 | Msa0969780:intron | 45.0% |
| GGGGAAGTAATACACTAGTG+AGG | - | chr6_4:1207595-1207614 | Msa0969780:intron | 45.0% | |
| AAAAGGCAGGACTAGATCTC+CGG | + | chr6_4:1207700-1207719 | None:intergenic | 45.0% | |
| AGGTAAACACTGATGTGGCA+TGG | + | chr6_4:1207921-1207940 | None:intergenic | 45.0% | |
| GCAGCTCCTAATGATTGCAT+GGG | + | chr6_4:1208094-1208113 | None:intergenic | 45.0% | |
| TGCAGCTCCTAATGATTGCA+TGG | + | chr6_4:1208095-1208114 | None:intergenic | 45.0% | |
| TGAGCGTATGAATTTCCCGA+TGG | + | chr6_4:1208193-1208212 | None:intergenic | 45.0% | |
| ! | GGTTTTGCAGCAGTTGTGTT+GGG | - | chr6_4:1208349-1208368 | Msa0969780:five_prime_UTR | 45.0% |
| CCATTGCCCCAAATGCTAAC+TGG | + | chr6_4:1202879-1202898 | None:intergenic | 50.0% | |
| ! | CCAGTTAGCATTTGGGGCAA+TGG | - | chr6_4:1202876-1202895 | Msa0969780:intron | 50.0% |
| !! | CCCTTACCGACTTCTTCTTC+AGG | - | chr6_4:1203914-1203933 | Msa0969780:intron | 50.0% |
| ATTAGCCGAGTTATACCGCG+GGG | + | chr6_4:1203964-1203983 | None:intergenic | 50.0% | |
| CATTAGCCGAGTTATACCGC+GGG | + | chr6_4:1203965-1203984 | None:intergenic | 50.0% | |
| CCATTAGCCGAGTTATACCG+CGG | + | chr6_4:1203966-1203985 | None:intergenic | 50.0% | |
| GGACATGCTTATGGATCGTG+AGG | - | chr6_4:1203984-1204003 | Msa0969780:intron | 50.0% | |
| ! | TTTTTCCGCTCCGCTATAGC+GGG | + | chr6_4:1204108-1204127 | None:intergenic | 50.0% |
| ! | TTTTCCATCACGGCTAGGAG+CGG | + | chr6_4:1204140-1204159 | None:intergenic | 50.0% |
| !!! | CGCTTTTTTCCATCACGGCT+AGG | + | chr6_4:1204145-1204164 | None:intergenic | 50.0% |
| AAAAAAGCGGCCCGCTATTC+AGG | - | chr6_4:1204156-1204175 | Msa0969780:intron | 50.0% | |
| ACACGCACCATGCAGAAAGA+CGG | - | chr6_4:1204218-1204237 | Msa0969780:intron | 50.0% | |
| GGCAAAACCGTCTTTCTGCA+TGG | + | chr6_4:1204228-1204247 | None:intergenic | 50.0% | |
| !!! | GTGTAGCGGGTGCTATTTTG+TGG | + | chr6_4:1204408-1204427 | None:intergenic | 50.0% |
| GTCAAAGCGGAAATGCAACG+CGG | + | chr6_4:1204471-1204490 | None:intergenic | 50.0% | |
| AGGGAGGAGGGAAATTCAGA+TGG | - | chr6_4:1204794-1204813 | Msa0969780:intron | 50.0% | |
| GAGGAGGGAAATTCAGATGG+TGG | - | chr6_4:1204797-1204816 | Msa0969780:intron | 50.0% | |
| ! | AGATGGTGGTGTAGTTGTGC+AGG | - | chr6_4:1204811-1204830 | Msa0969780:intron | 50.0% |
| GCTACTAAAGGGAGGTTCTG+AGG | - | chr6_4:1205249-1205268 | Msa0969780:intron | 50.0% | |
| GAACTGCAACAGGTACCCAT+TGG | + | chr6_4:1205466-1205485 | None:intergenic | 50.0% | |
| GGTGGAACTTGGAGTCTACT+TGG | - | chr6_4:1205784-1205803 | Msa0969780:intron | 50.0% | |
| ! | CTCCCATGCTTTTCCTGTGT+CGG | - | chr6_4:1207426-1207445 | Msa0969780:intron | 50.0% |
| CTACCGACACAGGAAAAGCA+TGG | + | chr6_4:1207432-1207451 | None:intergenic | 50.0% | |
| !! | GCTTTTCCTGTGTCGGTAGT+TGG | - | chr6_4:1207433-1207452 | Msa0969780:intron | 50.0% |
| AAAAGCCCAACTACCGACAC+AGG | + | chr6_4:1207442-1207461 | None:intergenic | 50.0% | |
| ! | GAGGCACCCATGCAATCATT+AGG | - | chr6_4:1208085-1208104 | Msa0969780:intron | 50.0% |
| AGGAAGCAGTGCACTGCATT+GGG | + | chr6_4:1208259-1208278 | None:intergenic | 50.0% | |
| TAGGAAGCAGTGCACTGCAT+TGG | + | chr6_4:1208260-1208279 | None:intergenic | 50.0% | |
| TAAGGTGTGGTCGAGCATCT+AGG | + | chr6_4:1208279-1208298 | None:intergenic | 50.0% | |
| ! | GGGTTTTGCAGCAGTTGTGT+TGG | - | chr6_4:1208348-1208367 | Msa0969780:five_prime_UTR | 50.0% |
| CTATCCCCCGCGGTATAACT+CGG | - | chr6_4:1203956-1203975 | Msa0969780:intron | 55.0% | |
| TTAGCCGAGTTATACCGCGG+GGG | + | chr6_4:1203963-1203982 | None:intergenic | 55.0% | |
| CCGCGGTATAACTCGGCTAA+TGG | - | chr6_4:1203963-1203982 | Msa0969780:intron | 55.0% | |
| GCCGCTATTGACAACAGAGC+TGG | + | chr6_4:1204078-1204097 | None:intergenic | 55.0% | |
| !!! | CGGGCCGCTTTTTTCCATCA+CGG | + | chr6_4:1204150-1204169 | None:intergenic | 55.0% |
| TCTGCATGGTGCGTGTGTAG+CGG | + | chr6_4:1204214-1204233 | None:intergenic | 55.0% | |
| ! | TCCCGCACCGCACCAATTTT+TGG | - | chr6_4:1204435-1204454 | Msa0969780:intron | 55.0% |
| CCCAAAAATTGGTGCGGTGC+GGG | + | chr6_4:1204439-1204458 | None:intergenic | 55.0% | |
| ! | CCCGCACCGCACCAATTTTT+GGG | - | chr6_4:1204436-1204455 | Msa0969780:intron | 55.0% |
| CCCCAAAAATTGGTGCGGTG+CGG | + | chr6_4:1204440-1204459 | None:intergenic | 55.0% | |
| ! | CCGCACCGCACCAATTTTTG+GGG | - | chr6_4:1204437-1204456 | Msa0969780:intron | 55.0% |
| !! | CACCGCACCAATTTTTGGGG+TGG | - | chr6_4:1204440-1204459 | Msa0969780:intron | 55.0% |
| GGCCACCCCAAAAATTGGTG+CGG | + | chr6_4:1204445-1204464 | None:intergenic | 55.0% | |
| TTACCTCAGCTTCACGGGTC+AGG | + | chr6_4:1204610-1204629 | None:intergenic | 55.0% | |
| GTGGTGTAGTTGTGCAGGTG+AGG | - | chr6_4:1204816-1204835 | Msa0969780:intron | 55.0% | |
| GTAGTTGTGCAGGTGAGGCA+TGG | - | chr6_4:1204821-1204840 | Msa0969780:intron | 55.0% | |
| !! | GAGGTTCTGAGGCTGATCCT+GGG | - | chr6_4:1205260-1205279 | Msa0969780:intron | 55.0% |
| ACCTGTTGCAGTTCGCTGTG+CGG | - | chr6_4:1205472-1205491 | Msa0969780:intron | 55.0% | |
| GCGTAGACGCTAGCATTGCT+TGG | + | chr6_4:1206462-1206481 | None:intergenic | 55.0% | |
| ATTGGGGCAATCTGCTAGCC+AGG | + | chr6_4:1208242-1208261 | None:intergenic | 55.0% | |
| GGAAGCAGTGCACTGCATTG+GGG | + | chr6_4:1208258-1208277 | None:intergenic | 55.0% | |
| ! | CAAGGCACCACGAACCTGCA+AGG | + | chr6_4:1203493-1203512 | None:intergenic | 60.0% |
| CTTGCAGGTTCGTGGTGCCT+TGG | - | chr6_4:1203491-1203510 | Msa0969780:CDS | 60.0% | |
| TGCGTGTGTAGCGGCTGCTT+TGG | + | chr6_4:1204205-1204224 | None:intergenic | 60.0% | |
| !!! | GCGGGTGCTATTTTGTGGCG+CGG | + | chr6_4:1204403-1204422 | None:intergenic | 60.0% |
| AAATTGGTGCGGTGCGGGAG+CGG | + | chr6_4:1204434-1204453 | None:intergenic | 60.0% | |
| TCACCTGACCCGTGAAGCTG+AGG | - | chr6_4:1204604-1204623 | Msa0969780:intron | 60.0% | |
| !! | GGAGGTTCTGAGGCTGATCC+TGG | - | chr6_4:1205259-1205278 | Msa0969780:intron | 60.0% |
| ACCGCACAGCGAACTGCAAC+AGG | + | chr6_4:1205476-1205495 | None:intergenic | 60.0% | |
| AGTTCTTGGAGAGGAGCCGC+AGG | - | chr6_4:1206137-1206156 | Msa0969780:CDS | 60.0% | |
| ! | TTCCGCTCCGCTATAGCGGG+CGG | + | chr6_4:1204105-1204124 | None:intergenic | 65.0% |
| CCATCACGGCTAGGAGCGGT+GGG | + | chr6_4:1204136-1204155 | None:intergenic | 65.0% | |
| TCCATCACGGCTAGGAGCGG+TGG | + | chr6_4:1204137-1204156 | None:intergenic | 65.0% | |
| CGGCCCGCTATTCAGGAGTG+CGG | - | chr6_4:1204163-1204182 | Msa0969780:intron | 65.0% | |
| ! | GGCCCGCTATTCAGGAGTGC+GGG | - | chr6_4:1204164-1204183 | Msa0969780:intron | 65.0% |
| ! | GCCCGCTATTCAGGAGTGCG+GGG | - | chr6_4:1204165-1204184 | Msa0969780:intron | 65.0% |
| CCCCCGCACTCCTGAATAGC+GGG | + | chr6_4:1204169-1204188 | None:intergenic | 65.0% | |
| ! | CCCGCTATTCAGGAGTGCGG+GGG | - | chr6_4:1204166-1204185 | Msa0969780:intron | 65.0% |
| CCCCCCGCACTCCTGAATAG+CGG | + | chr6_4:1204170-1204189 | None:intergenic | 65.0% | |
| ! | CCGCTATTCAGGAGTGCGGG+GGG | - | chr6_4:1204167-1204186 | Msa0969780:intron | 65.0% |
| AATTGGTGCGGTGCGGGAGC+GGG | + | chr6_4:1204433-1204452 | None:intergenic | 65.0% | |
| GGCGCGGCCACCCCAAAAAT+TGG | + | chr6_4:1204450-1204469 | None:intergenic | 65.0% | |
| AGCGGAAATGCAACGCGGCG+CGG | + | chr6_4:1204466-1204485 | None:intergenic | 65.0% | |
| TTCAGGGCAGGTTCGGCCTG+CGG | + | chr6_4:1206156-1206175 | None:intergenic | 65.0% | |
| CCCACCGCTCCTAGCCGTGA+TGG | - | chr6_4:1204133-1204152 | Msa0969780:intron | 70.0% | |
| TGCGGGAGCGGGGTGTGTAG+CGG | + | chr6_4:1204422-1204441 | None:intergenic | 70.0% | |
| ATTGGTGCGGTGCGGGAGCG+GGG | + | chr6_4:1204432-1204451 | None:intergenic | 70.0% | |
| !! | CTCCGCTATAGCGGGCGGCG+CGG | + | chr6_4:1204100-1204119 | None:intergenic | 75.0% |
| ! | CGCCGCCCGCTATAGCGGAG+CGG | - | chr6_4:1204100-1204119 | Msa0969780:intron | 75.0% |
| GCGGGAGCGGGGTGTGTAGC+GGG | + | chr6_4:1204421-1204440 | None:intergenic | 75.0% | |
| ! | GGCCGCGCCGCCCGCTATAG+CGG | - | chr6_4:1204095-1204114 | Msa0969780:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 1201580 | 1208390 | 1201580 | ID=Msa0969780;Name=Msa0969780 |
| chr6_4 | mRNA | 1201580 | 1208390 | 1201580 | ID=Msa0969780-mRNA-1;Parent=Msa0969780;Name=Msa0969780-mRNA-1;_AED=0.09;_eAED=0.09;_QI=213|1|0.94|1|1|1|18|0|585 |
| chr6_4 | exon | 1201580 | 1201903 | 1201580 | ID=Msa0969780-mRNA-1:exon:703;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1203037 | 1203102 | 1203037 | ID=Msa0969780-mRNA-1:exon:702;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1203198 | 1203246 | 1203198 | ID=Msa0969780-mRNA-1:exon:701;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1203422 | 1203525 | 1203422 | ID=Msa0969780-mRNA-1:exon:700;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1203713 | 1203898 | 1203713 | ID=Msa0969780-mRNA-1:exon:699;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1204477 | 1204548 | 1204477 | ID=Msa0969780-mRNA-1:exon:698;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1204646 | 1204759 | 1204646 | ID=Msa0969780-mRNA-1:exon:697;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1204845 | 1204931 | 1204845 | ID=Msa0969780-mRNA-1:exon:696;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1205002 | 1205052 | 1205002 | ID=Msa0969780-mRNA-1:exon:695;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1205138 | 1205233 | 1205138 | ID=Msa0969780-mRNA-1:exon:694;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1205345 | 1205398 | 1205345 | ID=Msa0969780-mRNA-1:exon:693;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1205965 | 1206034 | 1205965 | ID=Msa0969780-mRNA-1:exon:692;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1206119 | 1206192 | 1206119 | ID=Msa0969780-mRNA-1:exon:691;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1206326 | 1206472 | 1206326 | ID=Msa0969780-mRNA-1:exon:690;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1206931 | 1206983 | 1206931 | ID=Msa0969780-mRNA-1:exon:689;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1207072 | 1207199 | 1207072 | ID=Msa0969780-mRNA-1:exon:688;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1207315 | 1207364 | 1207315 | ID=Msa0969780-mRNA-1:exon:687;Parent=Msa0969780-mRNA-1 |
| chr6_4 | exon | 1208148 | 1208390 | 1208148 | ID=Msa0969780-mRNA-1:exon:686;Parent=Msa0969780-mRNA-1 |
| chr6_4 | five_prime_UTR | 1208178 | 1208390 | 1208178 | ID=Msa0969780-mRNA-1:five_prime_utr;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1208148 | 1208177 | 1208148 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1207315 | 1207364 | 1207315 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1207072 | 1207199 | 1207072 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1206931 | 1206983 | 1206931 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1206326 | 1206472 | 1206326 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1206119 | 1206192 | 1206119 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1205965 | 1206034 | 1205965 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1205345 | 1205398 | 1205345 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1205138 | 1205233 | 1205138 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1205002 | 1205052 | 1205002 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1204845 | 1204931 | 1204845 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1204646 | 1204759 | 1204646 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1204477 | 1204548 | 1204477 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1203713 | 1203898 | 1203713 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1203422 | 1203525 | 1203422 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1203198 | 1203246 | 1203198 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1203037 | 1203102 | 1203037 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| chr6_4 | CDS | 1201580 | 1201903 | 1201580 | ID=Msa0969780-mRNA-1:cds;Parent=Msa0969780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
