Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077610 | MCI03748.1 | 88.587 | 184 | 21 | 0 | 98 | 281 | 40 | 223 | 1.64e-111 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077610 | sp|Q03194|PMA4_NICPL | 82.065 | 184 | 33 | 0 | 98 | 281 | 183 | 366 | 1.53e-100 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077610 | A0A392NV98 | 88.587 | 184 | 21 | 0 | 98 | 281 | 40 | 223 | 7.85e-112 | 333 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0719080 | Msa1077610 | 0.874717 | 5.429007e-68 | -8.615850e-47 |
| Msa0719090 | Msa1077610 | 0.880202 | 6.664393e-70 | -8.615850e-47 |
| Msa0719390 | Msa1077610 | 0.869362 | 3.276822e-66 | -8.615850e-47 |
| Msa0789640 | Msa1077610 | 0.868439 | 6.526201e-66 | -8.615850e-47 |
| Msa1077610 | Msa1077620 | 0.926801 | 2.842929e-91 | -8.615850e-47 |
| Msa1077610 | Msa1138460 | 0.806283 | 8.868499e-50 | -8.615850e-47 |
| Msa1077610 | Msa1305900 | 0.867789 | 1.055843e-65 | -8.615850e-47 |
| Msa1077610 | Msa1338620 | 0.800022 | 1.751576e-48 | -8.615850e-47 |
| Msa0500520 | Msa1077610 | 0.833433 | 5.349420e-56 | -8.615850e-47 |
| Msa0500530 | Msa1077610 | 0.829755 | 4.309803e-55 | -8.615850e-47 |
| Msa0500540 | Msa1077610 | 0.823019 | 1.734998e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077610 | MtrunA17_Chr1g0148031 | 89.130 | 184 | 20 | 0 | 98 | 281 | 182 | 365 | 1.81e-108 | 335 |
| Msa1077610 | MtrunA17_Chr3g0138931 | 84.783 | 184 | 28 | 0 | 98 | 281 | 182 | 365 | 1.33e-104 | 325 |
| Msa1077610 | MtrunA17_Chr4g0072131 | 82.065 | 184 | 33 | 0 | 98 | 281 | 185 | 368 | 2.43e-101 | 317 |
| Msa1077610 | MtrunA17_Chr8g0365021 | 82.609 | 184 | 32 | 0 | 98 | 281 | 252 | 435 | 1.04e-99 | 314 |
| Msa1077610 | MtrunA17_Chr1g0147981 | 80.978 | 184 | 35 | 0 | 98 | 281 | 199 | 382 | 4.35e-99 | 311 |
| Msa1077610 | MtrunA17_Chr2g0298031 | 79.459 | 185 | 38 | 0 | 97 | 281 | 186 | 370 | 3.34e-97 | 305 |
| Msa1077610 | MtrunA17_Chr2g0333721 | 76.087 | 184 | 44 | 0 | 98 | 281 | 180 | 363 | 2.77e-94 | 298 |
| Msa1077610 | MtrunA17_Chr4g0059961 | 77.717 | 184 | 41 | 0 | 98 | 281 | 186 | 369 | 3.65e-94 | 298 |
| Msa1077610 | MtrunA17_Chr6g0452721 | 76.630 | 184 | 43 | 0 | 98 | 281 | 184 | 367 | 3.84e-94 | 297 |
| Msa1077610 | MtrunA17_Chr4g0065481 | 77.717 | 184 | 41 | 0 | 98 | 281 | 183 | 366 | 7.12e-94 | 296 |
| Msa1077610 | MtrunA17_Chr2g0304941 | 75.543 | 184 | 45 | 0 | 98 | 281 | 183 | 366 | 3.97e-92 | 291 |
| Msa1077610 | MtrunA17_Chr8g0335291 | 69.565 | 184 | 56 | 0 | 98 | 281 | 190 | 373 | 8.72e-85 | 273 |
| Msa1077610 | MtrunA17_Chr7g0276551 | 72.222 | 126 | 35 | 0 | 156 | 281 | 6 | 131 | 8.73e-60 | 201 |
| Msa1077610 | MtrunA17_Chr8g0382711 | 87.179 | 78 | 8 | 1 | 27 | 102 | 111 | 188 | 8.57e-41 | 140 |
| Msa1077610 | MtrunA17_Chr7g0276541 | 69.565 | 69 | 21 | 0 | 89 | 157 | 192 | 260 | 5.27e-22 | 93.2 |
| Msa1077610 | MtrunA17_Chr4g0052911 | 53.247 | 77 | 34 | 1 | 27 | 101 | 144 | 220 | 1.62e-20 | 87.8 |
| Msa1077610 | MtrunA17_Chr8g0339171 | 42.667 | 75 | 35 | 2 | 22 | 94 | 48 | 116 | 1.76e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077610 | AT2G18960.3 | 79.348 | 184 | 38 | 0 | 98 | 281 | 116 | 299 | 1.51e-98 | 308 |
| Msa1077610 | AT2G18960.2 | 79.348 | 184 | 38 | 0 | 98 | 281 | 116 | 299 | 1.51e-98 | 308 |
| Msa1077610 | AT2G18960.1 | 79.348 | 184 | 38 | 0 | 98 | 281 | 180 | 363 | 8.11e-98 | 307 |
| Msa1077610 | AT4G30190.1 | 79.348 | 184 | 38 | 0 | 98 | 281 | 180 | 363 | 2.14e-97 | 306 |
| Msa1077610 | AT4G30190.2 | 79.348 | 184 | 38 | 0 | 98 | 281 | 180 | 363 | 5.44e-97 | 306 |
| Msa1077610 | AT2G24520.3 | 78.142 | 183 | 40 | 0 | 99 | 281 | 163 | 345 | 1.72e-96 | 303 |
| Msa1077610 | AT2G24520.1 | 78.142 | 183 | 40 | 0 | 99 | 281 | 163 | 345 | 1.72e-96 | 303 |
| Msa1077610 | AT2G07560.1 | 77.717 | 184 | 41 | 0 | 98 | 281 | 183 | 366 | 2.56e-96 | 303 |
| Msa1077610 | AT2G24520.2 | 78.142 | 183 | 40 | 0 | 99 | 281 | 226 | 408 | 5.28e-96 | 303 |
| Msa1077610 | AT5G57350.4 | 78.261 | 184 | 40 | 0 | 98 | 281 | 181 | 364 | 3.65e-95 | 300 |
| Msa1077610 | AT5G57350.2 | 78.261 | 184 | 40 | 0 | 98 | 281 | 181 | 364 | 3.65e-95 | 300 |
| Msa1077610 | AT5G57350.1 | 78.261 | 184 | 40 | 0 | 98 | 281 | 181 | 364 | 3.65e-95 | 300 |
| Msa1077610 | AT3G47950.1 | 77.174 | 184 | 42 | 0 | 98 | 281 | 188 | 371 | 2.37e-94 | 298 |
| Msa1077610 | AT3G47950.2 | 77.174 | 184 | 42 | 0 | 98 | 281 | 188 | 371 | 2.37e-94 | 298 |
| Msa1077610 | AT3G42640.1 | 75.543 | 184 | 45 | 0 | 98 | 281 | 183 | 366 | 2.65e-92 | 293 |
| Msa1077610 | AT5G62670.1 | 75.000 | 184 | 46 | 0 | 98 | 281 | 184 | 367 | 2.55e-91 | 290 |
| Msa1077610 | AT1G80660.2 | 73.370 | 184 | 49 | 0 | 98 | 281 | 56 | 239 | 5.58e-91 | 287 |
| Msa1077610 | AT1G80660.4 | 73.370 | 184 | 49 | 0 | 98 | 281 | 185 | 368 | 1.72e-90 | 288 |
| Msa1077610 | AT1G80660.3 | 73.370 | 184 | 49 | 0 | 98 | 281 | 185 | 368 | 1.77e-90 | 288 |
| Msa1077610 | AT1G80660.1 | 73.370 | 184 | 49 | 0 | 98 | 281 | 185 | 368 | 4.75e-90 | 287 |
| Msa1077610 | AT3G60330.4 | 72.826 | 184 | 50 | 0 | 98 | 281 | 183 | 366 | 5.34e-87 | 279 |
| Msa1077610 | AT3G60330.3 | 72.826 | 184 | 50 | 0 | 98 | 281 | 183 | 366 | 5.34e-87 | 279 |
| Msa1077610 | AT3G60330.2 | 72.432 | 185 | 51 | 0 | 97 | 281 | 182 | 366 | 5.74e-87 | 279 |
| Msa1077610 | AT3G60330.1 | 72.432 | 185 | 51 | 0 | 97 | 281 | 182 | 366 | 5.74e-87 | 279 |
| Msa1077610 | AT1G17260.1 | 68.681 | 182 | 57 | 0 | 99 | 280 | 189 | 370 | 3.06e-81 | 263 |
| Msa1077610 | AT4G11730.1 | 61.749 | 183 | 69 | 1 | 100 | 281 | 183 | 365 | 1.06e-69 | 230 |
| Msa1077610 | AT2G24520.4 | 80.392 | 102 | 20 | 0 | 180 | 281 | 1 | 102 | 1.66e-49 | 174 |
| Msa1077610 | AT5G57350.3 | 79.412 | 102 | 21 | 0 | 180 | 281 | 1 | 102 | 1.61e-48 | 171 |
| Msa1077610 | AT4G39710.1 | 83.333 | 78 | 11 | 1 | 27 | 102 | 115 | 192 | 1.42e-38 | 135 |
| Msa1077610 | AT4G39710.3 | 83.333 | 78 | 11 | 1 | 27 | 102 | 115 | 192 | 1.42e-38 | 135 |
| Msa1077610 | AT5G45680.1 | 58.750 | 80 | 31 | 1 | 27 | 104 | 112 | 191 | 5.95e-23 | 94.0 |
| Msa1077610 | AT4G39710.2 | 82.692 | 52 | 7 | 1 | 27 | 76 | 115 | 166 | 4.73e-21 | 88.2 |
Find 56 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGGGTGATGGGGATTTC+AGG | 0.221177 | 7_2:+76354231 | Msa1077610:CDS |
| TTCAATCGCTGTTGGAATAT+TGG | 0.237984 | 7_2:+76355546 | Msa1077610:CDS |
| TCTGATGAACTCTTTGTTAC+AGG | 0.258261 | 7_2:-76355358 | None:intergenic |
| ATGAGCTGCTTTACAGAAAA+AGG | 0.270076 | 7_2:-76355452 | None:intergenic |
| ACACCAATACTCATAGTTAA+AGG | 0.293539 | 7_2:-76354475 | None:intergenic |
| CAGAAAGTGCTTACAGCAAT+TGG | 0.311428 | 7_2:+76355508 | Msa1077610:CDS |
| CCATCTTAAAAGTCATTTAC+AGG | 0.331529 | 7_2:+76354266 | Msa1077610:CDS |
| AGATGGAATCGACTATCTTT+TGG | 0.334197 | 7_2:+76355612 | Msa1077610:CDS |
| TTTCTGTAAAGCAGCTCATT+TGG | 0.343413 | 7_2:+76355456 | Msa1077610:CDS |
| GAACCTGCAGGCTGTTTCTC+AGG | 0.359789 | 7_2:+76354775 | Msa1077610:CDS |
| GAGAAACAGCCTGCAGGTTC+AGG | 0.368306 | 7_2:-76354772 | None:intergenic |
| GTTCTTTGCAGTGATAAAAC+TGG | 0.371607 | 7_2:+76355772 | Msa1077610:CDS |
| ATCACCCTCATCAAACTCTT+TGG | 0.386936 | 7_2:-76354219 | None:intergenic |
| TGCATTTGTTCAATCGCTGT+TGG | 0.401651 | 7_2:+76355538 | Msa1077610:CDS |
| TTTCAGGTAATAAGGGGATT+GGG | 0.405894 | 7_2:+76354584 | Msa1077610:intron |
| TTGTCCGTCACTATGGCTAC+TGG | 0.434639 | 7_2:+76355676 | Msa1077610:CDS |
| TTCAGGTTCAACGGTTAAGA+AGG | 0.444834 | 7_2:+76355390 | Msa1077610:CDS |
| GAAGTAGTTGTTATTGCTAC+TGG | 0.451315 | 7_2:+76355421 | Msa1077610:CDS |
| TAACTATGAGTATTGGTGTT+GGG | 0.456250 | 7_2:+76354479 | Msa1077610:CDS |
| AATGACAGGTGTTGAGGAAA+TGG | 0.465881 | 7_2:+76355738 | Msa1077610:CDS |
| AAGAGTTTGATGAGGGTGAT+GGG | 0.470728 | 7_2:+76354222 | Msa1077610:CDS |
| AAAATAGTTGGCATTGCAAT+GGG | 0.473718 | 7_2:-76355655 | None:intergenic |
| CTATGGCTACTGGTTCTCAT+AGG | 0.479574 | 7_2:+76355686 | Msa1077610:CDS |
| TTAATACCTGTCCGCATTGG+AGG | 0.500058 | 7_2:-76354629 | None:intergenic |
| ATGTTCCTTCTCAATTCCCT+TGG | 0.508555 | 7_2:-76355848 | None:intergenic |
| AATTTAATACCTGTCCGCAT+TGG | 0.509560 | 7_2:-76354632 | None:intergenic |
| AGGCCTTTAACTATGAGTAT+TGG | 0.511932 | 7_2:+76354472 | Msa1077610:CDS |
| ATTCCTCCATTGTTAGCGTA+TGG | 0.515896 | 7_2:+76354748 | Msa1077610:CDS |
| CTTGATTGAAGTGTTTGCCA+AGG | 0.524726 | 7_2:+76355831 | Msa1077610:CDS |
| CAAAATAGTTGGCATTGCAA+TGG | 0.526567 | 7_2:-76355656 | None:intergenic |
| GTTGATAGTGCTAACCAAGT+TGG | 0.526599 | 7_2:+76355478 | Msa1077610:CDS |
| CTTTCTGTAAGTGTCCAACT+TGG | 0.531388 | 7_2:-76355492 | None:intergenic |
| TTAACTATGAGTATTGGTGT+TGG | 0.533936 | 7_2:+76354478 | Msa1077610:CDS |
| AAAGAGTTTGATGAGGGTGA+TGG | 0.538821 | 7_2:+76354221 | Msa1077610:CDS |
| TGTTGAGGAAATGGCTGGAA+TGG | 0.552451 | 7_2:+76355747 | Msa1077610:CDS |
| TTGATTGAAGTGTTTGCCAA+GGG | 0.556551 | 7_2:+76355832 | Msa1077610:CDS |
| GGAGTACCTCCAATGCGGAC+AGG | 0.556804 | 7_2:+76354623 | Msa1077610:CDS |
| ATAGTAGTTATAAACGTGCT+AGG | 0.557937 | 7_2:+76354452 | Msa1077610:CDS |
| AAACCTGAGAAACAGCCTGC+AGG | 0.559779 | 7_2:-76354778 | None:intergenic |
| GCGTATGGTCCTGAACCTGC+AGG | 0.559980 | 7_2:+76354763 | Msa1077610:CDS |
| CAACACCGCAAGTATAGAGA+TGG | 0.563303 | 7_2:+76355595 | Msa1077610:CDS |
| ATAGTGACGGACAAAATAGT+TGG | 0.564137 | 7_2:-76355667 | None:intergenic |
| TATACAGCTAAATTCGCTGA+TGG | 0.576589 | 7_2:+76354418 | Msa1077610:CDS |
| TCAGGTTCAACGGTTAAGAA+GGG | 0.578347 | 7_2:+76355391 | Msa1077610:CDS |
| GTTTGCCAAGGGAATTGAGA+AGG | 0.579595 | 7_2:+76355843 | Msa1077610:CDS |
| TATGAGTATTGGTGTTGGGA+AGG | 0.580116 | 7_2:+76354483 | Msa1077610:CDS |
| ACAGGTGTTGAGGAAATGGC+TGG | 0.581654 | 7_2:+76355742 | Msa1077610:CDS |
| CGATTCCATCTCTATACTTG+CGG | 0.581855 | 7_2:-76355600 | None:intergenic |
| TCTCATAGGCTTTCACAGCA+AGG | 0.590142 | 7_2:+76355700 | Msa1077610:CDS |
| AGAGTTTGATGAGGGTGATG+GGG | 0.605791 | 7_2:+76354223 | Msa1077610:CDS |
| AACACCAAAGAGTTTGATGA+GGG | 0.637512 | 7_2:+76354215 | Msa1077610:CDS |
| CAACACCAAAGAGTTTGATG+AGG | 0.646969 | 7_2:+76354214 | Msa1077610:CDS |
| TCAGGACCATACGCTAACAA+TGG | 0.656714 | 7_2:-76354754 | None:intergenic |
| GGACCATACGCTAACAATGG+AGG | 0.666829 | 7_2:-76354751 | None:intergenic |
| GTGGAGGAGTACCTCCAATG+CGG | 0.673121 | 7_2:+76354618 | Msa1077610:CDS |
| AGAACCAGTAGCCATAGTGA+CGG | 0.689992 | 7_2:-76355680 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAAATTTTAATTTTTTGT+GGG | + | chr7_2:76352249-76352268 | Msa1077610:intron | 10.0% |
| !! | AAAAAATCATAAATAACAAA+TGG | - | chr7_2:76352521-76352540 | None:intergenic | 10.0% |
| !!! | CTGAAAATTTTAATTTTTTG+TGG | + | chr7_2:76352248-76352267 | Msa1077610:intron | 15.0% |
| !!! | AAAACAATTTTTACTAAACA+GGG | - | chr7_2:76353198-76353217 | None:intergenic | 15.0% |
| !!! | AAAAACAATTTTTACTAAAC+AGG | - | chr7_2:76353199-76353218 | None:intergenic | 15.0% |
| !!! | TTTAGTAAAAATTGTTTTTC+AGG | + | chr7_2:76353200-76353219 | Msa1077610:intron | 15.0% |
| !! | GTGAATTTATTATAGAAAAA+GGG | + | chr7_2:76353420-76353439 | Msa1077610:intron | 15.0% |
| !! | TAAAAGTAAACTAATATGTT+TGG | - | chr7_2:76353603-76353622 | None:intergenic | 15.0% |
| !!! | GAGTTTACATTAATTTTATA+TGG | - | chr7_2:76353657-76353676 | None:intergenic | 15.0% |
| !! | ATTGAATGTAAATTAAATGT+TGG | + | chr7_2:76353765-76353784 | Msa1077610:intron | 15.0% |
| !! | CTAATTAAACTTGATTAAAA+GGG | - | chr7_2:76354353-76354372 | None:intergenic | 15.0% |
| !! | ACTAATTAAACTTGATTAAA+AGG | - | chr7_2:76354354-76354373 | None:intergenic | 15.0% |
| !! | TTTAATTAGTCAATTAATGA+GGG | + | chr7_2:76354364-76354383 | Msa1077610:intron | 15.0% |
| !!! | TTTATTTACTATTTTTACGT+AGG | + | chr7_2:76354706-76354725 | Msa1077610:intron | 15.0% |
| !! | ATTAGTAGAAAATATACTTT+GGG | - | chr7_2:76354961-76354980 | None:intergenic | 15.0% |
| !! | TAATAAATGAAGATAAATAG+AGG | - | chr7_2:76355131-76355150 | None:intergenic | 15.0% |
| !! | AGAATAAACTTTCTTAATTT+AGG | + | chr7_2:76355175-76355194 | Msa1077610:intron | 15.0% |
| !! | ACGAAAAATCAAAATTTCAA+CGG | - | chr7_2:76352122-76352141 | None:intergenic | 20.0% |
| !! | ATTCAAATTCAACAATTCAA+CGG | - | chr7_2:76352172-76352191 | None:intergenic | 20.0% |
| !! | GTTGAATTTGAATAAAAAAG+AGG | + | chr7_2:76352179-76352198 | Msa1077610:intron | 20.0% |
| !!! | TTTTGGGTCTTTTAAAAAAA+TGG | + | chr7_2:76352343-76352362 | Msa1077610:intron | 20.0% |
| !! | CAAAAACACATTATTATCAA+AGG | - | chr7_2:76352392-76352411 | None:intergenic | 20.0% |
| !!! | ATTCATCATCTATTTTTTGT+AGG | + | chr7_2:76352820-76352839 | Msa1077610:intron | 20.0% |
| !!! | CTTTCATTTGTAATTTTCAA+AGG | + | chr7_2:76352898-76352917 | Msa1077610:intron | 20.0% |
| !! | AAAAAAGAAACTATTCTTCA+AGG | + | chr7_2:76353141-76353160 | Msa1077610:intron | 20.0% |
| !!! | GATTATTTGATAGTTATGTA+AGG | + | chr7_2:76353300-76353319 | Msa1077610:intron | 20.0% |
| !! | TATCTCCATTATGATTAATT+TGG | + | chr7_2:76353330-76353349 | Msa1077610:intron | 20.0% |
| !! | AAACTCCAAATTAATCATAA+TGG | - | chr7_2:76353338-76353357 | None:intergenic | 20.0% |
| !!! | GATTAATTTGGAGTTTATAT+TGG | + | chr7_2:76353342-76353361 | Msa1077610:intron | 20.0% |
| !! | TTCTATAATAAATTCACCAA+TGG | - | chr7_2:76353417-76353436 | None:intergenic | 20.0% |
| !! | GGTGAATTTATTATAGAAAA+AGG | + | chr7_2:76353419-76353438 | Msa1077610:intron | 20.0% |
| !! | AATTTATTATAGAAAAAGGG+TGG | + | chr7_2:76353423-76353442 | Msa1077610:intron | 20.0% |
| !!! | TGAAGCTTACTAATAAATTT+TGG | - | chr7_2:76353485-76353504 | None:intergenic | 20.0% |
| !! | AATTGATAAATGAATTGCAT+AGG | + | chr7_2:76353572-76353591 | Msa1077610:intron | 20.0% |
| !!! | TGATTTTTGCTTTTGTTATT+TGG | + | chr7_2:76353814-76353833 | Msa1077610:intron | 20.0% |
| !! | GTTTAATTAGTCAATTAATG+AGG | + | chr7_2:76354363-76354382 | Msa1077610:intron | 20.0% |
| !!! | TTGTTACGGTTAAATTTTTT+TGG | + | chr7_2:76354517-76354536 | Msa1077610:intron | 20.0% |
| !! | TGATGAGTTTGTAATTATAA+AGG | + | chr7_2:76354551-76354570 | Msa1077610:intron | 20.0% |
| !! | TTTGTAATTATAAAGGTGAA+TGG | + | chr7_2:76354558-76354577 | Msa1077610:intron | 20.0% |
| !! | TTGTAATTATAAAGGTGAAT+GGG | + | chr7_2:76354559-76354578 | Msa1077610:intron | 20.0% |
| !!! | CTACTACATTTTTTAGTTTT+AGG | - | chr7_2:76354871-76354890 | None:intergenic | 20.0% |
| !! | TTAGTAGAAAATATACTTTG+GGG | - | chr7_2:76354960-76354979 | None:intergenic | 20.0% |
| !! | CATTAGTAGAAAATATACTT+TGG | - | chr7_2:76354962-76354981 | None:intergenic | 20.0% |
| ! | AATTCAATAACATTGATGGA+GGG | - | chr7_2:76352096-76352115 | None:intergenic | 25.0% |
| ! | AAATTCAATAACATTGATGG+AGG | - | chr7_2:76352097-76352116 | None:intergenic | 25.0% |
| ! | GTGAAATTCAATAACATTGA+TGG | - | chr7_2:76352100-76352119 | None:intergenic | 25.0% |
| !!! | AAAATGGAATTTTGTTGTCT+TGG | + | chr7_2:76352359-76352378 | Msa1077610:intron | 25.0% |
| !!! | TAATGTGTTTTTGCTGATAT+TGG | + | chr7_2:76352399-76352418 | Msa1077610:intron | 25.0% |
| !!! | ATTGGTAATGTTATGTGATT+TGG | + | chr7_2:76352417-76352436 | Msa1077610:intron | 25.0% |
| ! | TGGTTATGTTTATGATTGAT+AGG | + | chr7_2:76352437-76352456 | Msa1077610:intron | 25.0% |
| ! | TATGTTTATGATTGATAGGT+TGG | + | chr7_2:76352441-76352460 | Msa1077610:intron | 25.0% |
| !! | CTACTTCTAGATACAAATTT+TGG | + | chr7_2:76352580-76352599 | Msa1077610:intron | 25.0% |
| !!! | TACAAATTTTGGCATGATTA+TGG | + | chr7_2:76352591-76352610 | Msa1077610:intron | 25.0% |
| ! | TATAGTGAAGTCATTCTTAA+AGG | + | chr7_2:76352678-76352697 | Msa1077610:intron | 25.0% |
| ! | ACTTAATTTCCAAATTCCAA+AGG | - | chr7_2:76352874-76352893 | None:intergenic | 25.0% |
| !! | TGTTTGAGATTAAGTACATT+TGG | + | chr7_2:76353015-76353034 | Msa1077610:intron | 25.0% |
| ! | AGTACATTTGGATATGTTTA+TGG | + | chr7_2:76353027-76353046 | Msa1077610:intron | 25.0% |
| !! | AATTTTTACTAAACAGGGTT+AGG | - | chr7_2:76353193-76353212 | None:intergenic | 25.0% |
| ! | AAATAATCCTTACTGCTAAA+CGG | - | chr7_2:76353288-76353307 | None:intergenic | 25.0% |
| !!! | CTTTTGTTATTTGGTGATTT+CGG | + | chr7_2:76353823-76353842 | Msa1077610:intron | 25.0% |
| !!! | TTTTGTTATTTGGTGATTTC+GGG | + | chr7_2:76353824-76353843 | Msa1077610:intron | 25.0% |
| ! | ACTGATGCAATTAATCAATT+TGG | + | chr7_2:76354082-76354101 | Msa1077610:intron | 25.0% |
| !! | TTTTTCATACTATGCATATG+TGG | + | chr7_2:76354185-76354204 | Msa1077610:intron | 25.0% |
| !!! | TTACATCAGAAAGCATATTT+TGG | - | chr7_2:76354319-76354338 | None:intergenic | 25.0% |
| !! | AGGTAGATAAGTTTTTGTTA+CGG | + | chr7_2:76354503-76354522 | Msa1077610:intron | 25.0% |
| ! | TGTAATTATAAAGGTGAATG+GGG | + | chr7_2:76354560-76354579 | Msa1077610:intron | 25.0% |
| !! | TGTTTAAGTTTCATTGTTCA+TGG | + | chr7_2:76354665-76354684 | Msa1077610:intron | 25.0% |
| !!! | ATTTACTATTTTTACGTAGG+TGG | + | chr7_2:76354709-76354728 | Msa1077610:intron | 25.0% |
| !!! | TTTACTATTTTTACGTAGGT+GGG | + | chr7_2:76354710-76354729 | Msa1077610:intron | 25.0% |
| !!! | ATGTAATTTGCTACTAAACA+TGG | + | chr7_2:76354827-76354846 | Msa1077610:intron | 25.0% |
| ! | TAAAAAATGTAGTAGACACT+TGG | + | chr7_2:76354876-76354895 | Msa1077610:intron | 25.0% |
| ! | TAGTAGAAAATATACTTTGG+GGG | - | chr7_2:76354959-76354978 | None:intergenic | 25.0% |
| ! | ACAATTACAAAAAGAATGAC+AGG | + | chr7_2:76355724-76355743 | Msa1077610:CDS | 25.0% |
| ! | AGAATTGTTTGCTAAACACT+TGG | - | chr7_2:76352070-76352089 | None:intergenic | 30.0% |
| AACGGTGAAACACAAAATTA+GGG | - | chr7_2:76352154-76352173 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGAGATTTGAGAA+TGG | + | chr7_2:76352273-76352292 | Msa1077610:intron | 30.0% |
| !!! | TGTTGTTGTTTTCTGAACTA+AGG | + | chr7_2:76352310-76352329 | Msa1077610:intron | 30.0% |
| ! | ACTAAGGTATGCTTGAATTT+TGG | + | chr7_2:76352326-76352345 | Msa1077610:intron | 30.0% |
| ! | CTAAGGTATGCTTGAATTTT+GGG | + | chr7_2:76352327-76352346 | Msa1077610:intron | 30.0% |
| !! | GAATTTTGTTGTCTTGGTTA+AGG | + | chr7_2:76352365-76352384 | Msa1077610:intron | 30.0% |
| ! | GACATTTTGTATCTAAGAGA+AGG | + | chr7_2:76352493-76352512 | Msa1077610:intron | 30.0% |
| TGAAGTCATTCTTAAAGGTT+TGG | + | chr7_2:76352683-76352702 | Msa1077610:intron | 30.0% | |
| TCCAAATTCCAAAGGAAAAT+GGG | - | chr7_2:76352866-76352885 | None:intergenic | 30.0% | |
| TTCCAAATTCCAAAGGAAAA+TGG | - | chr7_2:76352867-76352886 | None:intergenic | 30.0% | |
| CAAAGGATCTTAACAAAATG+TGG | + | chr7_2:76352915-76352934 | Msa1077610:intron | 30.0% | |
| ! | TATGTTTATGGTACCTGTTT+TGG | + | chr7_2:76353039-76353058 | Msa1077610:intron | 30.0% |
| ! | TGTTTCTTCAAGTTATCTTC+AGG | + | chr7_2:76353371-76353390 | Msa1077610:intron | 30.0% |
| TAATCTGCTGTATAATCCAT+TGG | + | chr7_2:76353398-76353417 | Msa1077610:intron | 30.0% | |
| ! | CTTTTAAACACATATCTCCT+TGG | + | chr7_2:76353617-76353636 | Msa1077610:intron | 30.0% |
| CATAATCTAGCTACAGAATA+TGG | - | chr7_2:76353706-76353725 | None:intergenic | 30.0% | |
| TCTGTAGCTAGATTATGAAT+TGG | + | chr7_2:76353709-76353728 | Msa1077610:intron | 30.0% | |
| !!! | ATTGGTTTGTTTTGTGATTC+TGG | + | chr7_2:76353850-76353869 | Msa1077610:intron | 30.0% |
| !!! | TTGGTTTGTTTTGTGATTCT+GGG | + | chr7_2:76353851-76353870 | Msa1077610:intron | 30.0% |
| TAATTGCATCAGTGAATCTT+TGG | - | chr7_2:76354075-76354094 | None:intergenic | 30.0% | |
| GATGCAATTAATCAATTTGG+AGG | + | chr7_2:76354085-76354104 | Msa1077610:intron | 30.0% | |
| !! | CCTGTAAATGACTTTTAAGA+TGG | - | chr7_2:76354269-76354288 | None:intergenic | 30.0% |
| CCATCTTAAAAGTCATTTAC+AGG | + | chr7_2:76354266-76354285 | Msa1077610:CDS | 30.0% | |
| ATAGTAGTTATAAACGTGCT+AGG | + | chr7_2:76354452-76354471 | Msa1077610:CDS | 30.0% | |
| ACACCAATACTCATAGTTAA+AGG | - | chr7_2:76354478-76354497 | None:intergenic | 30.0% | |
| !! | TTAACTATGAGTATTGGTGT+TGG | + | chr7_2:76354478-76354497 | Msa1077610:CDS | 30.0% |
| !! | TAACTATGAGTATTGGTGTT+GGG | + | chr7_2:76354479-76354498 | Msa1077610:CDS | 30.0% |
| TGAATCATTAATCGTGCATT+TGG | + | chr7_2:76354908-76354927 | Msa1077610:intron | 30.0% | |
| AGTAGAAAATATACTTTGGG+GGG | - | chr7_2:76354958-76354977 | None:intergenic | 30.0% | |
| AAAAAACAGTTACAGTGCTA+CGG | + | chr7_2:76354985-76355004 | Msa1077610:intron | 30.0% | |
| TTAAAATGATGTCTCAAGAG+TGG | - | chr7_2:76355032-76355051 | None:intergenic | 30.0% | |
| AAAATAGTTGGCATTGCAAT+GGG | - | chr7_2:76355658-76355677 | None:intergenic | 30.0% | |
| CAACGGTGAAACACAAAATT+AGG | - | chr7_2:76352155-76352174 | None:intergenic | 35.0% | |
| GCTAATCTTTGATTGCAGTT+TGG | + | chr7_2:76352208-76352227 | Msa1077610:intron | 35.0% | |
| TCTTTGATTGCAGTTTGGAT+TGG | + | chr7_2:76352213-76352232 | Msa1077610:intron | 35.0% | |
| ATTTGAGAATGGTGATTGAC+TGG | + | chr7_2:76352284-76352303 | Msa1077610:intron | 35.0% | |
| TTTGAGAATGGTGATTGACT+GGG | + | chr7_2:76352285-76352304 | Msa1077610:intron | 35.0% | |
| ! | TTATGATTGATAGGTTGGAG+TGG | + | chr7_2:76352446-76352465 | Msa1077610:intron | 35.0% |
| TGGACAAATGATTGATAGGT+TGG | + | chr7_2:76352466-76352485 | Msa1077610:intron | 35.0% | |
| ! | AAATGATTGATAGGTTGGAG+TGG | + | chr7_2:76352471-76352490 | Msa1077610:intron | 35.0% |
| ! | TGAGAGAGCAAGCATATTTT+TGG | - | chr7_2:76352651-76352670 | None:intergenic | 35.0% |
| CCAAATTCCAAAGGAAAATG+GGG | - | chr7_2:76352865-76352884 | None:intergenic | 35.0% | |
| GTGGTTTGATACATTAAGCT+TGG | + | chr7_2:76352934-76352953 | Msa1077610:intron | 35.0% | |
| ATACATTAAGCTTGGTACCT+TGG | + | chr7_2:76352942-76352961 | Msa1077610:intron | 35.0% | |
| !!! | TTTATGGTACCTGTTTTGGT+GGG | + | chr7_2:76353043-76353062 | Msa1077610:intron | 35.0% |
| !! | TTGTGTAAAGCTTTGGGTAT+TGG | + | chr7_2:76353070-76353089 | Msa1077610:intron | 35.0% |
| !! | TGTTTTTATCACTCATCGCT+TGG | + | chr7_2:76353167-76353186 | Msa1077610:intron | 35.0% |
| TGTCTTCTTTCTGTATTTGC+AGG | + | chr7_2:76353446-76353465 | Msa1077610:intron | 35.0% | |
| AAACTGTAGCTTCAAAGTGT+TGG | - | chr7_2:76353512-76353531 | None:intergenic | 35.0% | |
| !! | TGGTAGATCTTTAAAGTCCA+AGG | - | chr7_2:76353637-76353656 | None:intergenic | 35.0% |
| ! | TTGGTTGATTTCATCATGTG+TGG | + | chr7_2:76353784-76353803 | Msa1077610:intron | 35.0% |
| ! | TTCTGGGTGCAAAATTTTGA+AGG | + | chr7_2:76353867-76353886 | Msa1077610:intron | 35.0% |
| GAGCAGAAAAACAACACAAA+AGG | - | chr7_2:76353929-76353948 | None:intergenic | 35.0% | |
| CTAAAACTGATGTGCTGAAA+TGG | + | chr7_2:76354035-76354054 | Msa1077610:intron | 35.0% | |
| AACACCAAAGAGTTTGATGA+GGG | + | chr7_2:76354215-76354234 | Msa1077610:CDS | 35.0% | |
| TATACAGCTAAATTCGCTGA+TGG | + | chr7_2:76354418-76354437 | Msa1077610:CDS | 35.0% | |
| AGGCCTTTAACTATGAGTAT+TGG | + | chr7_2:76354472-76354491 | Msa1077610:CDS | 35.0% | |
| !!! | AATGGGGTTTTCAGGTAATA+AGG | + | chr7_2:76354576-76354595 | Msa1077610:intron | 35.0% |
| !!! | ATGGGGTTTTCAGGTAATAA+GGG | + | chr7_2:76354577-76354596 | Msa1077610:intron | 35.0% |
| !!! | TTTTCAGGTAATAAGGGGAT+TGG | + | chr7_2:76354583-76354602 | Msa1077610:intron | 35.0% |
| ! | TTTCAGGTAATAAGGGGATT+GGG | + | chr7_2:76354584-76354603 | Msa1077610:intron | 35.0% |
| ! | ATAAGGGGATTGGGAATTTT+AGG | + | chr7_2:76354593-76354612 | Msa1077610:CDS | 35.0% |
| ! | TAAGGGGATTGGGAATTTTA+GGG | + | chr7_2:76354594-76354613 | Msa1077610:CDS | 35.0% |
| AATTTAATACCTGTCCGCAT+TGG | - | chr7_2:76354635-76354654 | None:intergenic | 35.0% | |
| ! | TAGAAAATATACTTTGGGGG+GGG | - | chr7_2:76354956-76354975 | None:intergenic | 35.0% |
| ! | GTAGAAAATATACTTTGGGG+GGG | - | chr7_2:76354957-76354976 | None:intergenic | 35.0% |
| AAAAACAGTTACAGTGCTAC+GGG | + | chr7_2:76354986-76355005 | Msa1077610:intron | 35.0% | |
| ATGTCTCAAGAGTGGAATAT+TGG | - | chr7_2:76355024-76355043 | None:intergenic | 35.0% | |
| GACATAATCAGTACCAAGTT+AGG | + | chr7_2:76355251-76355270 | Msa1077610:intron | 35.0% | |
| TTCTCCTGTTAAATTGCAGA+CGG | - | chr7_2:76355332-76355351 | None:intergenic | 35.0% | |
| TCTGATGAACTCTTTGTTAC+AGG | - | chr7_2:76355361-76355380 | None:intergenic | 35.0% | |
| ! | GAAGTAGTTGTTATTGCTAC+TGG | + | chr7_2:76355421-76355440 | Msa1077610:CDS | 35.0% |
| ! | ATGAGCTGCTTTACAGAAAA+AGG | - | chr7_2:76355455-76355474 | None:intergenic | 35.0% |
| TTTCTGTAAAGCAGCTCATT+TGG | + | chr7_2:76355456-76355475 | Msa1077610:CDS | 35.0% | |
| TTCAATCGCTGTTGGAATAT+TGG | + | chr7_2:76355546-76355565 | Msa1077610:CDS | 35.0% | |
| ! | AGATGGAATCGACTATCTTT+TGG | + | chr7_2:76355612-76355631 | Msa1077610:CDS | 35.0% |
| !!! | TATCTTTTGGTGCTTTTGCT+TGG | + | chr7_2:76355625-76355644 | Msa1077610:CDS | 35.0% |
| CAAAATAGTTGGCATTGCAA+TGG | - | chr7_2:76355659-76355678 | None:intergenic | 35.0% | |
| !! | ATAGTGACGGACAAAATAGT+TGG | - | chr7_2:76355670-76355689 | None:intergenic | 35.0% |
| ! | AACTATTTTGTCCGTCACTA+TGG | + | chr7_2:76355669-76355688 | Msa1077610:CDS | 35.0% |
| ! | AAAAAGAATGACAGGTGTTG+AGG | + | chr7_2:76355732-76355751 | Msa1077610:CDS | 35.0% |
| GTTCTTTGCAGTGATAAAAC+TGG | + | chr7_2:76355772-76355791 | Msa1077610:CDS | 35.0% | |
| ! | TTGATTGAAGTGTTTGCCAA+GGG | + | chr7_2:76355832-76355851 | Msa1077610:CDS | 35.0% |
| GGAGTGGACAAATGATTGAT+AGG | + | chr7_2:76352462-76352481 | Msa1077610:intron | 40.0% | |
| AAAGGAAAATGGGGAGGTTA+AGG | - | chr7_2:76352856-76352875 | None:intergenic | 40.0% | |
| ! | TTAACCTCCCCATTTTCCTT+TGG | + | chr7_2:76352855-76352874 | Msa1077610:intron | 40.0% |
| AATTCCAAAGGAAAATGGGG+AGG | - | chr7_2:76352862-76352881 | None:intergenic | 40.0% | |
| !!! | CCCCATTTTCCTTTGGAATT+TGG | + | chr7_2:76352862-76352881 | Msa1077610:intron | 40.0% |
| ATTAAGCTTGGTACCTTGGA+TGG | + | chr7_2:76352946-76352965 | Msa1077610:intron | 40.0% | |
| !! | GTTTATGGTACCTGTTTTGG+TGG | + | chr7_2:76353042-76353061 | Msa1077610:intron | 40.0% |
| GGTGTGTTGTGTAAAGCTTT+GGG | + | chr7_2:76353064-76353083 | Msa1077610:intron | 40.0% | |
| GCTAAGATGCTTGTAACAGA+AGG | - | chr7_2:76353226-76353245 | None:intergenic | 40.0% | |
| ! | TTTGGTGATTTCGGGTGAAT+TGG | + | chr7_2:76353832-76353851 | Msa1077610:intron | 40.0% |
| TGCTCTTGCAATTGAGCTTT+GGG | + | chr7_2:76353944-76353963 | Msa1077610:intron | 40.0% | |
| ATACTATGCATATGTGGCAG+AGG | + | chr7_2:76354191-76354210 | Msa1077610:intron | 40.0% | |
| CAACACCAAAGAGTTTGATG+AGG | + | chr7_2:76354214-76354233 | Msa1077610:CDS | 40.0% | |
| ATCACCCTCATCAAACTCTT+TGG | - | chr7_2:76354222-76354241 | None:intergenic | 40.0% | |
| AAAGAGTTTGATGAGGGTGA+TGG | + | chr7_2:76354221-76354240 | Msa1077610:CDS | 40.0% | |
| AAGAGTTTGATGAGGGTGAT+GGG | + | chr7_2:76354222-76354241 | Msa1077610:CDS | 40.0% | |
| !! | GCATATTTTGGATTCAGCGT+AGG | - | chr7_2:76354307-76354326 | None:intergenic | 40.0% |
| !! | TATGAGTATTGGTGTTGGGA+AGG | + | chr7_2:76354483-76354502 | Msa1077610:CDS | 40.0% |
| ! | TAAAGGTGAATGGGGTTTTC+AGG | + | chr7_2:76354568-76354587 | Msa1077610:intron | 40.0% |
| !!! | TGGGGTTTTCAGGTAATAAG+GGG | + | chr7_2:76354578-76354597 | Msa1077610:intron | 40.0% |
| ! | AAGGGGATTGGGAATTTTAG+GGG | + | chr7_2:76354595-76354614 | Msa1077610:CDS | 40.0% |
| ATTCCTCCATTGTTAGCGTA+TGG | + | chr7_2:76354748-76354767 | Msa1077610:CDS | 40.0% | |
| ! | AGAAAATATACTTTGGGGGG+GGG | - | chr7_2:76354955-76354974 | None:intergenic | 40.0% |
| !! | TAAATAGAGGCGTTGCTACA+TGG | - | chr7_2:76355118-76355137 | None:intergenic | 40.0% |
| !! | AGGTACTGAGAGATAGTAGA+TGG | + | chr7_2:76355195-76355214 | Msa1077610:intron | 40.0% |
| !! | TTGGTACTGATTATGTCTCC+TGG | - | chr7_2:76355248-76355267 | None:intergenic | 40.0% |
| TGGAACGATATCTCCTAACT+TGG | - | chr7_2:76355267-76355286 | None:intergenic | 40.0% | |
| TTACCCGTCTGCAATTTAAC+AGG | + | chr7_2:76355325-76355344 | Msa1077610:intron | 40.0% | |
| TCTCCTGTTAAATTGCAGAC+GGG | - | chr7_2:76355331-76355350 | None:intergenic | 40.0% | |
| !! | TCATCAGACGAAGTGTTTTC+AGG | + | chr7_2:76355373-76355392 | Msa1077610:CDS | 40.0% |
| !!! | CGAAGTGTTTTCAGGTTCAA+CGG | + | chr7_2:76355381-76355400 | Msa1077610:CDS | 40.0% |
| ! | TTCAGGTTCAACGGTTAAGA+AGG | + | chr7_2:76355390-76355409 | Msa1077610:CDS | 40.0% |
| TCAGGTTCAACGGTTAAGAA+GGG | + | chr7_2:76355391-76355410 | Msa1077610:CDS | 40.0% | |
| !! | GTTGATAGTGCTAACCAAGT+TGG | + | chr7_2:76355478-76355497 | Msa1077610:CDS | 40.0% |
| CTTTCTGTAAGTGTCCAACT+TGG | - | chr7_2:76355495-76355514 | None:intergenic | 40.0% | |
| !! | CAGAAAGTGCTTACAGCAAT+TGG | + | chr7_2:76355508-76355527 | Msa1077610:CDS | 40.0% |
| TGCATTTGTTCAATCGCTGT+TGG | + | chr7_2:76355538-76355557 | Msa1077610:CDS | 40.0% | |
| CGATTCCATCTCTATACTTG+CGG | - | chr7_2:76355603-76355622 | None:intergenic | 40.0% | |
| !! | AATGACAGGTGTTGAGGAAA+TGG | + | chr7_2:76355738-76355757 | Msa1077610:CDS | 40.0% |
| ! | CTTGATTGAAGTGTTTGCCA+AGG | + | chr7_2:76355831-76355850 | Msa1077610:CDS | 40.0% |
| ATGTTCCTTCTCAATTCCCT+TGG | - | chr7_2:76355851-76355870 | None:intergenic | 40.0% | |
| GTACCTTGGATGGTTACAAC+TGG | + | chr7_2:76352956-76352975 | Msa1077610:intron | 45.0% | |
| CTACCAGTTGTAACCATCCA+AGG | - | chr7_2:76352962-76352981 | None:intergenic | 45.0% | |
| GGGTGTGTTGTGTAAAGCTT+TGG | + | chr7_2:76353063-76353082 | Msa1077610:intron | 45.0% | |
| ! | TGTCTTGCCGTTTAGCAGTA+AGG | + | chr7_2:76353278-76353297 | Msa1077610:intron | 45.0% |
| CTGCTCTTGCAATTGAGCTT+TGG | + | chr7_2:76353943-76353962 | Msa1077610:intron | 45.0% | |
| AGAGTTTGATGAGGGTGATG+GGG | + | chr7_2:76354223-76354242 | Msa1077610:CDS | 45.0% | |
| ! | AGGGGATTGGGAATTTTAGG+GGG | + | chr7_2:76354596-76354615 | Msa1077610:CDS | 45.0% |
| TTAATACCTGTCCGCATTGG+AGG | - | chr7_2:76354632-76354651 | None:intergenic | 45.0% | |
| TCAGGACCATACGCTAACAA+TGG | - | chr7_2:76354757-76354776 | None:intergenic | 45.0% | |
| ! | AAAATATACTTTGGGGGGGG+GGG | - | chr7_2:76354953-76354972 | None:intergenic | 45.0% |
| ! | GAAAATATACTTTGGGGGGG+GGG | - | chr7_2:76354954-76354973 | None:intergenic | 45.0% |
| !! | GATGCTGCAGTTTTAGTACC+AGG | + | chr7_2:76355227-76355246 | Msa1077610:intron | 45.0% |
| CAACACCGCAAGTATAGAGA+TGG | + | chr7_2:76355595-76355614 | Msa1077610:CDS | 45.0% | |
| !!! | CTTTTGGTGCTTTTGCTTGG+TGG | + | chr7_2:76355628-76355647 | Msa1077610:CDS | 45.0% |
| AGAACCAGTAGCCATAGTGA+CGG | - | chr7_2:76355683-76355702 | None:intergenic | 45.0% | |
| !! | CTATGGCTACTGGTTCTCAT+AGG | + | chr7_2:76355686-76355705 | Msa1077610:CDS | 45.0% |
| TCTCATAGGCTTTCACAGCA+AGG | + | chr7_2:76355700-76355719 | Msa1077610:CDS | 45.0% | |
| TGTTGAGGAAATGGCTGGAA+TGG | + | chr7_2:76355747-76355766 | Msa1077610:CDS | 45.0% | |
| GTTTGCCAAGGGAATTGAGA+AGG | + | chr7_2:76355843-76355862 | Msa1077610:CDS | 45.0% | |
| AATGGGGAGGTTAAGGAGCA+AGG | - | chr7_2:76352849-76352868 | None:intergenic | 50.0% | |
| CACAACACACCCACCAAAAC+AGG | - | chr7_2:76353055-76353074 | None:intergenic | 50.0% | |
| !! | ATGAGGGTGATGGGGATTTC+AGG | + | chr7_2:76354231-76354250 | Msa1077610:CDS | 50.0% |
| !! | GGATTGGGAATTTTAGGGGG+TGG | + | chr7_2:76354599-76354618 | Msa1077610:CDS | 50.0% |
| !! | TTGGGAATTTTAGGGGGTGG+AGG | + | chr7_2:76354602-76354621 | Msa1077610:CDS | 50.0% |
| GGACCATACGCTAACAATGG+AGG | - | chr7_2:76354754-76354773 | None:intergenic | 50.0% | |
| AAACCTGAGAAACAGCCTGC+AGG | - | chr7_2:76354781-76354800 | None:intergenic | 50.0% | |
| ! | AAATATACTTTGGGGGGGGG+GGG | - | chr7_2:76354952-76354971 | None:intergenic | 50.0% |
| GCAGACGGGTAAATGCTCAA+AGG | - | chr7_2:76355317-76355336 | None:intergenic | 50.0% | |
| TTGTCCGTCACTATGGCTAC+TGG | + | chr7_2:76355676-76355695 | Msa1077610:CDS | 50.0% | |
| !! | ACAGGTGTTGAGGAAATGGC+TGG | + | chr7_2:76355742-76355761 | Msa1077610:CDS | 50.0% |
| !! | GTGGAGGAGTACCTCCAATG+CGG | + | chr7_2:76354618-76354637 | Msa1077610:CDS | 55.0% |
| GAGAAACAGCCTGCAGGTTC+AGG | - | chr7_2:76354775-76354794 | None:intergenic | 55.0% | |
| !! | GAACCTGCAGGCTGTTTCTC+AGG | + | chr7_2:76354775-76354794 | Msa1077610:CDS | 55.0% |
| ! | AATATACTTTGGGGGGGGGG+GGG | - | chr7_2:76354951-76354970 | None:intergenic | 55.0% |
| TCAAGAAGACGCGCATCAGC+TGG | - | chr7_2:76355287-76355306 | None:intergenic | 55.0% | |
| AGCTGATGCGCGTCTTCTTG+AGG | + | chr7_2:76355286-76355305 | Msa1077610:intron | 55.0% | |
| GCTGATGCGCGTCTTCTTGA+GGG | + | chr7_2:76355287-76355306 | Msa1077610:intron | 55.0% | |
| ! | GGAGTACCTCCAATGCGGAC+AGG | + | chr7_2:76354623-76354642 | Msa1077610:CDS | 60.0% |
| GCGTATGGTCCTGAACCTGC+AGG | + | chr7_2:76354763-76354782 | Msa1077610:CDS | 60.0% | |
| ! | ATATACTTTGGGGGGGGGGG+GGG | - | chr7_2:76354950-76354969 | None:intergenic | 60.0% |
| ! | TATACTTTGGGGGGGGGGGG+GGG | - | chr7_2:76354949-76354968 | None:intergenic | 65.0% |
| ! | ATACTTTGGGGGGGGGGGGG+GGG | - | chr7_2:76354948-76354967 | None:intergenic | 70.0% |
| ! | TACTTTGGGGGGGGGGGGGG+GGG | - | chr7_2:76354947-76354966 | None:intergenic | 75.0% |
| !! | ACTTTGGGGGGGGGGGGGGG+GGG | - | chr7_2:76354946-76354965 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 76352064 | 76355891 | 76352064 | ID=Msa1077610;Name=Msa1077610 |
| chr7_2 | mRNA | 76352064 | 76355891 | 76352064 | ID=Msa1077610-mRNA-1;Parent=Msa1077610;Name=Msa1077610-mRNA-1;_AED=0.41;_eAED=0.80;_QI=0|0.6|0.66|1|0.8|0.83|6|0|281 |
| chr7_2 | exon | 76352064 | 76352070 | 76352064 | ID=Msa1077610-mRNA-1:exon:18397;Parent=Msa1077610-mRNA-1 |
| chr7_2 | exon | 76354211 | 76354287 | 76354211 | ID=Msa1077610-mRNA-1:exon:18398;Parent=Msa1077610-mRNA-1 |
| chr7_2 | exon | 76354412 | 76354504 | 76354412 | ID=Msa1077610-mRNA-1:exon:18399;Parent=Msa1077610-mRNA-1 |
| chr7_2 | exon | 76354590 | 76354644 | 76354590 | ID=Msa1077610-mRNA-1:exon:18400;Parent=Msa1077610-mRNA-1 |
| chr7_2 | exon | 76354728 | 76354796 | 76354728 | ID=Msa1077610-mRNA-1:exon:18401;Parent=Msa1077610-mRNA-1 |
| chr7_2 | exon | 76355347 | 76355891 | 76355347 | ID=Msa1077610-mRNA-1:exon:18402;Parent=Msa1077610-mRNA-1 |
| chr7_2 | CDS | 76352064 | 76352070 | 76352064 | ID=Msa1077610-mRNA-1:cds;Parent=Msa1077610-mRNA-1 |
| chr7_2 | CDS | 76354211 | 76354287 | 76354211 | ID=Msa1077610-mRNA-1:cds;Parent=Msa1077610-mRNA-1 |
| chr7_2 | CDS | 76354412 | 76354504 | 76354412 | ID=Msa1077610-mRNA-1:cds;Parent=Msa1077610-mRNA-1 |
| chr7_2 | CDS | 76354590 | 76354644 | 76354590 | ID=Msa1077610-mRNA-1:cds;Parent=Msa1077610-mRNA-1 |
| chr7_2 | CDS | 76354728 | 76354796 | 76354728 | ID=Msa1077610-mRNA-1:cds;Parent=Msa1077610-mRNA-1 |
| chr7_2 | CDS | 76355347 | 76355891 | 76355347 | ID=Msa1077610-mRNA-1:cds;Parent=Msa1077610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
