Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146540 | sp|C0Z2L5|BZP44_ARATH | 52.727 | 165 | 68 | 6 | 2 | 158 | 9 | 171 | 7.54e-47 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146540 | A0A072VF03 | 98.125 | 160 | 3 | 0 | 1 | 160 | 1 | 160 | 9.86e-112 | 323 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0146540 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0146540 | 0.815179 | 1.055653e-51 | -8.615850e-47 |
| Msa0002710 | Msa0146540 | 0.823698 | 1.203875e-53 | -8.615850e-47 |
| Msa0003400 | Msa0146540 | 0.974834 | 7.381286e-139 | -8.615850e-47 |
| Msa0005270 | Msa0146540 | 0.821791 | 3.345959e-53 | -8.615850e-47 |
| Msa0006110 | Msa0146540 | 0.816578 | 5.145557e-52 | -8.615850e-47 |
| Msa0007990 | Msa0146540 | 0.804272 | 2.339757e-49 | -8.615850e-47 |
| Msa0022550 | Msa0146540 | 0.822979 | 1.772530e-53 | -8.615850e-47 |
| Msa0030160 | Msa0146540 | 0.809326 | 2.000008e-50 | -8.615850e-47 |
| Msa0031180 | Msa0146540 | 0.802269 | 6.077855e-49 | -8.615850e-47 |
| Msa0037160 | Msa0146540 | 0.830287 | 3.196965e-55 | -8.615850e-47 |
| Msa0042550 | Msa0146540 | 0.826810 | 2.211364e-54 | -8.615850e-47 |
| Msa0043500 | Msa0146540 | 0.809894 | 1.509567e-50 | -8.615850e-47 |
| Msa0050820 | Msa0146540 | 0.984650 | 3.515292e-161 | -8.615850e-47 |
| Msa0054820 | Msa0146540 | 0.859369 | 4.339625e-63 | -8.615850e-47 |
| Msa0056450 | Msa0146540 | 0.828044 | 1.118663e-54 | -8.615850e-47 |
| Msa0059890 | Msa0146540 | 0.811337 | 7.364825e-51 | -8.615850e-47 |
| Msa0079110 | Msa0146540 | 0.814152 | 1.781863e-51 | -8.615850e-47 |
| Msa0080830 | Msa0146540 | 0.835293 | 1.825523e-56 | -8.615850e-47 |
| Msa0081650 | Msa0146540 | 0.805293 | 1.431609e-49 | -8.615850e-47 |
| Msa0092410 | Msa0146540 | 0.802594 | 5.209426e-49 | -8.615850e-47 |
| Msa0096580 | Msa0146540 | 0.803655 | 3.143067e-49 | -8.615850e-47 |
| Msa0100160 | Msa0146540 | 0.857795 | 1.279138e-62 | -8.615850e-47 |
| Msa0103250 | Msa0146540 | 0.811060 | 8.454560e-51 | -8.615850e-47 |
| Msa0104800 | Msa0146540 | 0.820865 | 5.471389e-53 | -8.615850e-47 |
| Msa0106620 | Msa0146540 | 0.825869 | 3.704643e-54 | -8.615850e-47 |
| Msa0106710 | Msa0146540 | 0.821138 | 4.736019e-53 | -8.615850e-47 |
| Msa0108390 | Msa0146540 | 0.821488 | 3.930767e-53 | -8.615850e-47 |
| Msa0108410 | Msa0146540 | 0.812795 | 3.542377e-51 | -8.615850e-47 |
| Msa0116790 | Msa0146540 | 0.812198 | 4.782250e-51 | -8.615850e-47 |
| Msa0125650 | Msa0146540 | 0.805401 | 1.359133e-49 | -8.615850e-47 |
| Msa0138020 | Msa0146540 | 0.806394 | 8.402753e-50 | -8.615850e-47 |
| Msa0141400 | Msa0146540 | 0.804043 | 2.610577e-49 | -8.615850e-47 |
| Msa0143850 | Msa0146540 | 0.812974 | 3.236185e-51 | -8.615850e-47 |
| Msa0146540 | Msa0149300 | 0.808637 | 2.809030e-50 | -8.615850e-47 |
| Msa0146540 | Msa0151180 | 0.803433 | 3.493527e-49 | -8.615850e-47 |
| Msa0146540 | Msa0154440 | 0.806575 | 7.697570e-50 | -8.615850e-47 |
| Msa0146540 | Msa0164080 | 0.808671 | 2.761717e-50 | -8.615850e-47 |
| Msa0146540 | Msa0168870 | 0.812387 | 4.349543e-51 | -8.615850e-47 |
| Msa0146540 | Msa0173390 | 0.832761 | 7.860098e-56 | -8.615850e-47 |
| Msa0146540 | Msa0176050 | 0.800393 | 1.471898e-48 | -8.615850e-47 |
| Msa0146540 | Msa0177210 | 0.800999 | 1.107034e-48 | -8.615850e-47 |
| Msa0146540 | Msa0178510 | 0.831264 | 1.842062e-55 | -8.615850e-47 |
| Msa0146540 | Msa0187030 | 0.844380 | 7.838003e-59 | -8.615850e-47 |
| Msa0146540 | Msa0187830 | 0.828794 | 7.375141e-55 | -8.615850e-47 |
| Msa0146540 | Msa0205010 | 0.845959 | 2.932565e-59 | -8.615850e-47 |
| Msa0146540 | Msa0212040 | 0.814309 | 1.644929e-51 | -8.615850e-47 |
| Msa0146540 | Msa0217700 | 0.807788 | 4.259516e-50 | -8.615850e-47 |
| Msa0146540 | Msa0218810 | 0.809423 | 1.906591e-50 | -8.615850e-47 |
| Msa0146540 | Msa0225110 | 0.804942 | 1.695807e-49 | -8.615850e-47 |
| Msa0146540 | Msa0225220 | 0.836889 | 7.182840e-57 | -8.615850e-47 |
| Msa0146540 | Msa0225640 | 0.804382 | 2.218508e-49 | -8.615850e-47 |
| Msa0146540 | Msa0232020 | 0.804545 | 2.052372e-49 | -8.615850e-47 |
| Msa0146540 | Msa0237210 | 0.815890 | 7.331702e-52 | -8.615850e-47 |
| Msa0146540 | Msa0240270 | 0.800444 | 1.437287e-48 | -8.615850e-47 |
| Msa0146540 | Msa0241140 | 0.825344 | 4.933870e-54 | -8.615850e-47 |
| Msa0146540 | Msa0243250 | 0.804384 | 2.217183e-49 | -8.615850e-47 |
| Msa0146540 | Msa0258310 | 0.809408 | 1.920763e-50 | -8.615850e-47 |
| Msa0146540 | Msa0266350 | 0.812342 | 4.450063e-51 | -8.615850e-47 |
| Msa0146540 | Msa0269560 | 0.804138 | 2.494861e-49 | -8.615850e-47 |
| Msa0146540 | Msa0315690 | 0.817279 | 3.580050e-52 | -8.615850e-47 |
| Msa0146540 | Msa0317730 | 0.801350 | 9.386777e-49 | -8.615850e-47 |
| Msa0146540 | Msa0318720 | 0.801699 | 7.961606e-49 | -8.615850e-47 |
| Msa0146540 | Msa0322900 | 0.800649 | 1.305543e-48 | -8.615850e-47 |
| Msa0146540 | Msa0335800 | 0.803987 | 2.681630e-49 | -8.615850e-47 |
| Msa0146540 | Msa0339910 | 0.801163 | 1.025049e-48 | -8.615850e-47 |
| Msa0146540 | Msa0341690 | 0.809231 | 2.095555e-50 | -8.615850e-47 |
| Msa0146540 | Msa0342010 | 0.851182 | 1.048641e-60 | -8.615850e-47 |
| Msa0146540 | Msa0344930 | 0.801898 | 7.245194e-49 | -8.615850e-47 |
| Msa0146540 | Msa0346700 | 0.806026 | 1.004382e-49 | -8.615850e-47 |
| Msa0146540 | Msa0348530 | 0.804550 | 2.046607e-49 | -8.615850e-47 |
| Msa0146540 | Msa0358890 | 0.819555 | 1.092449e-52 | -8.615850e-47 |
| Msa0146540 | Msa0360210 | 0.819914 | 9.042529e-53 | -8.615850e-47 |
| Msa0146540 | Msa0363790 | 0.818809 | 1.614756e-52 | -8.615850e-47 |
| Msa0146540 | Msa0363810 | 0.802109 | 6.557369e-49 | -8.615850e-47 |
| Msa0146540 | Msa0365100 | 0.803935 | 2.748636e-49 | -8.615850e-47 |
| Msa0146540 | Msa0367870 | 0.814977 | 1.170476e-51 | -8.615850e-47 |
| Msa0146540 | Msa0378970 | 0.849257 | 3.631862e-60 | -8.615850e-47 |
| Msa0146540 | Msa0389910 | 0.856099 | 4.044077e-62 | -8.615850e-47 |
| Msa0146540 | Msa0397820 | 0.801828 | 7.489163e-49 | -8.615850e-47 |
| Msa0146540 | Msa0403640 | 0.815634 | 8.359676e-52 | -8.615850e-47 |
| Msa0146540 | Msa0403660 | 0.818768 | 1.649763e-52 | -8.615850e-47 |
| Msa0146540 | Msa0406770 | 0.818757 | 1.659589e-52 | -8.615850e-47 |
| Msa0146540 | Msa0411410 | 0.817656 | 2.944617e-52 | -8.615850e-47 |
| Msa0146540 | Msa0427120 | 0.801960 | 7.035134e-49 | -8.615850e-47 |
| Msa0146540 | Msa0428050 | 0.805484 | 1.305856e-49 | -8.615850e-47 |
| Msa0146540 | Msa0428580 | 0.828832 | 7.221197e-55 | -8.615850e-47 |
| Msa0146540 | Msa0430640 | 0.806408 | 8.347313e-50 | -8.615850e-47 |
| Msa0146540 | Msa0443000 | 0.811404 | 7.119945e-51 | -8.615850e-47 |
| Msa0146540 | Msa0468410 | 0.818677 | 1.729996e-52 | -8.615850e-47 |
| Msa0146540 | Msa0468800 | 0.814779 | 1.294623e-51 | -8.615850e-47 |
| Msa0146540 | Msa0471420 | 0.822013 | 2.971884e-53 | -8.615850e-47 |
| Msa0146540 | Msa0473330 | 0.815250 | 1.018121e-51 | -8.615850e-47 |
| Msa0146540 | Msa0474940 | 0.839307 | 1.713800e-57 | -8.615850e-47 |
| Msa0146540 | Msa0479200 | 0.812416 | 4.286499e-51 | -8.615850e-47 |
| Msa0146540 | Msa0480780 | 0.824874 | 6.371825e-54 | -8.615850e-47 |
| Msa0146540 | Msa0488790 | 0.825659 | 4.154589e-54 | -8.615850e-47 |
| Msa0146540 | Msa0506830 | 0.802611 | 5.167064e-49 | -8.615850e-47 |
| Msa0146540 | Msa0517640 | 0.805467 | 1.316360e-49 | -8.615850e-47 |
| Msa0146540 | Msa0518030 | 0.801613 | 8.290717e-49 | -8.615850e-47 |
| Msa0146540 | Msa0518440 | 0.819102 | 1.384846e-52 | -8.615850e-47 |
| Msa0146540 | Msa0526070 | -0.812963 | 3.253754e-51 | -8.615850e-47 |
| Msa0146540 | Msa0532960 | 0.813044 | 3.123689e-51 | -8.615850e-47 |
| Msa0146540 | Msa0532970 | 0.809343 | 1.983191e-50 | -8.615850e-47 |
| Msa0146540 | Msa0532980 | 0.823433 | 1.388646e-53 | -8.615850e-47 |
| Msa0146540 | Msa0544660 | 0.833302 | 5.765210e-56 | -8.615850e-47 |
| Msa0146540 | Msa0545850 | 0.805800 | 1.120552e-49 | -8.615850e-47 |
| Msa0146540 | Msa0553240 | 0.801323 | 9.506503e-49 | -8.615850e-47 |
| Msa0146540 | Msa0559500 | 0.813338 | 2.692029e-51 | -8.615850e-47 |
| Msa0146540 | Msa0562570 | 0.822418 | 2.394454e-53 | -8.615850e-47 |
| Msa0146540 | Msa0574390 | 0.844013 | 9.831770e-59 | -8.615850e-47 |
| Msa0146540 | Msa0576680 | 0.837012 | 6.681494e-57 | -8.615850e-47 |
| Msa0146540 | Msa0579660 | 0.834619 | 2.699025e-56 | -8.615850e-47 |
| Msa0146540 | Msa0588090 | 0.821437 | 4.040406e-53 | -8.615850e-47 |
| Msa0146540 | Msa0598160 | 0.820099 | 8.203213e-53 | -8.615850e-47 |
| Msa0146540 | Msa0601950 | 0.838433 | 2.884861e-57 | -8.615850e-47 |
| Msa0146540 | Msa0613710 | 0.809248 | 2.078653e-50 | -8.615850e-47 |
| Msa0146540 | Msa0620910 | 0.810316 | 1.224796e-50 | -8.615850e-47 |
| Msa0146540 | Msa0622170 | -0.808245 | 3.404950e-50 | -8.615850e-47 |
| Msa0146540 | Msa0636020 | 0.806860 | 6.698460e-50 | -8.615850e-47 |
| Msa0146540 | Msa0637900 | 0.822353 | 2.479066e-53 | -8.615850e-47 |
| Msa0146540 | Msa0652690 | 0.827011 | 1.979606e-54 | -8.615850e-47 |
| Msa0146540 | Msa0656000 | 0.805435 | 1.336720e-49 | -8.615850e-47 |
| Msa0146540 | Msa0658590 | 0.805134 | 1.545961e-49 | -8.615850e-47 |
| Msa0146540 | Msa0661320 | 0.833617 | 4.810463e-56 | -8.615850e-47 |
| Msa0146540 | Msa0667770 | 0.818252 | 2.159238e-52 | -8.615850e-47 |
| Msa0146540 | Msa0667780 | 0.809118 | 2.216482e-50 | -8.615850e-47 |
| Msa0146540 | Msa0667790 | 0.822748 | 2.006562e-53 | -8.615850e-47 |
| Msa0146540 | Msa0667800 | 0.811392 | 7.162403e-51 | -8.615850e-47 |
| Msa0146540 | Msa0680660 | 0.825110 | 5.604130e-54 | -8.615850e-47 |
| Msa0146540 | Msa0698290 | 0.815614 | 8.446447e-52 | -8.615850e-47 |
| Msa0146540 | Msa0698640 | 0.803093 | 4.108660e-49 | -8.615850e-47 |
| Msa0146540 | Msa0704920 | 0.809717 | 1.648133e-50 | -8.615850e-47 |
| Msa0146540 | Msa0710270 | 0.820228 | 7.663272e-53 | -8.615850e-47 |
| Msa0146540 | Msa0711430 | 0.812846 | 3.451900e-51 | -8.615850e-47 |
| Msa0146540 | Msa0711830 | 0.809132 | 2.200894e-50 | -8.615850e-47 |
| Msa0146540 | Msa0712560 | 0.812995 | 3.201328e-51 | -8.615850e-47 |
| Msa0146540 | Msa0721280 | 0.834546 | 2.815285e-56 | -8.615850e-47 |
| Msa0146540 | Msa0729510 | 0.803277 | 3.764782e-49 | -8.615850e-47 |
| Msa0146540 | Msa0738030 | 0.800701 | 1.273778e-48 | -8.615850e-47 |
| Msa0146540 | Msa0750240 | 0.806596 | 7.618735e-50 | -8.615850e-47 |
| Msa0146540 | Msa0751260 | 0.823610 | 1.262845e-53 | -8.615850e-47 |
| Msa0146540 | Msa0756530 | 0.810425 | 1.160335e-50 | -8.615850e-47 |
| Msa0146540 | Msa0760180 | 0.802017 | 6.847758e-49 | -8.615850e-47 |
| Msa0146540 | Msa0762970 | 0.817978 | 2.491566e-52 | -8.615850e-47 |
| Msa0146540 | Msa0763890 | 0.807020 | 6.197402e-50 | -8.615850e-47 |
| Msa0146540 | Msa0763920 | 0.806333 | 8.656128e-50 | -8.615850e-47 |
| Msa0146540 | Msa0784480 | 0.803607 | 3.215413e-49 | -8.615850e-47 |
| Msa0146540 | Msa0795070 | 0.842983 | 1.853195e-58 | -8.615850e-47 |
| Msa0146540 | Msa0795360 | 0.805795 | 1.123497e-49 | -8.615850e-47 |
| Msa0146540 | Msa0797770 | 0.806281 | 8.878916e-50 | -8.615850e-47 |
| Msa0146540 | Msa0800700 | 0.813746 | 2.190162e-51 | -8.615850e-47 |
| Msa0146540 | Msa0811040 | 0.802677 | 5.009082e-49 | -8.615850e-47 |
| Msa0146540 | Msa0814710 | 0.830207 | 3.344835e-55 | -8.615850e-47 |
| Msa0146540 | Msa0817460 | 0.825108 | 5.609996e-54 | -8.615850e-47 |
| Msa0146540 | Msa0821780 | 0.810806 | 9.596063e-51 | -8.615850e-47 |
| Msa0146540 | Msa0830510 | 0.820431 | 6.883748e-53 | -8.615850e-47 |
| Msa0146540 | Msa0832120 | 0.803382 | 3.580816e-49 | -8.615850e-47 |
| Msa0146540 | Msa0832600 | 0.807492 | 4.922081e-50 | -8.615850e-47 |
| Msa0146540 | Msa0835230 | 0.800913 | 1.152986e-48 | -8.615850e-47 |
| Msa0146540 | Msa0866520 | 0.811074 | 8.395657e-51 | -8.615850e-47 |
| Msa0146540 | Msa0868160 | 0.833209 | 6.081385e-56 | -8.615850e-47 |
| Msa0146540 | Msa0873860 | 0.819959 | 8.831668e-53 | -8.615850e-47 |
| Msa0146540 | Msa0894710 | 0.800476 | 1.415549e-48 | -8.615850e-47 |
| Msa0146540 | Msa0898750 | 0.821616 | 3.673208e-53 | -8.615850e-47 |
| Msa0146540 | Msa0900620 | 0.820033 | 8.494746e-53 | -8.615850e-47 |
| Msa0146540 | Msa0906690 | 0.801644 | 8.170532e-49 | -8.615850e-47 |
| Msa0146540 | Msa0926470 | 0.838262 | 3.192722e-57 | -8.615850e-47 |
| Msa0146540 | Msa0928130 | 0.826098 | 3.267615e-54 | -8.615850e-47 |
| Msa0146540 | Msa0932350 | 0.802258 | 6.108838e-49 | -8.615850e-47 |
| Msa0146540 | Msa0936390 | 0.820283 | 7.443446e-53 | -8.615850e-47 |
| Msa0146540 | Msa0939000 | 0.806137 | 9.520485e-50 | -8.615850e-47 |
| Msa0146540 | Msa0945240 | 0.826582 | 2.506116e-54 | -8.615850e-47 |
| Msa0146540 | Msa0964310 | 0.806030 | 1.002503e-49 | -8.615850e-47 |
| Msa0146540 | Msa0965290 | 0.801081 | 1.065421e-48 | -8.615850e-47 |
| Msa0146540 | Msa0975940 | 0.812099 | 5.027809e-51 | -8.615850e-47 |
| Msa0146540 | Msa0980880 | 0.812144 | 4.915881e-51 | -8.615850e-47 |
| Msa0146540 | Msa0986510 | 0.816833 | 4.509205e-52 | -8.615850e-47 |
| Msa0146540 | Msa0990580 | 0.800903 | 1.158641e-48 | -8.615850e-47 |
| Msa0146540 | Msa1001390 | 0.822573 | 2.203533e-53 | -8.615850e-47 |
| Msa0146540 | Msa1010070 | 0.801445 | 8.972947e-49 | -8.615850e-47 |
| Msa0146540 | Msa1022820 | 0.811756 | 5.969433e-51 | -8.615850e-47 |
| Msa0146540 | Msa1031930 | 0.837213 | 5.933805e-57 | -8.615850e-47 |
| Msa0146540 | Msa1034500 | 0.852191 | 5.426906e-61 | -8.615850e-47 |
| Msa0146540 | Msa1036610 | 0.802489 | 5.475011e-49 | -8.615850e-47 |
| Msa0146540 | Msa1038080 | 0.821747 | 3.425155e-53 | -8.615850e-47 |
| Msa0146540 | Msa1039710 | -0.820420 | 6.924277e-53 | -8.615850e-47 |
| Msa0146540 | Msa1053200 | 0.806006 | 1.014372e-49 | -8.615850e-47 |
| Msa0146540 | Msa1063420 | 0.812316 | 4.508459e-51 | -8.615850e-47 |
| Msa0146540 | Msa1071770 | 0.821385 | 4.153130e-53 | -8.615850e-47 |
| Msa0146540 | Msa1080490 | 0.802657 | 5.056516e-49 | -8.615850e-47 |
| Msa0146540 | Msa1080640 | 0.800808 | 1.211196e-48 | -8.615850e-47 |
| Msa0146540 | Msa1081200 | 0.806577 | 7.687410e-50 | -8.615850e-47 |
| Msa0146540 | Msa1088410 | 0.816774 | 4.650752e-52 | -8.615850e-47 |
| Msa0146540 | Msa1094190 | 0.811733 | 6.039788e-51 | -8.615850e-47 |
| Msa0146540 | Msa1098270 | 0.800439 | 1.440338e-48 | -8.615850e-47 |
| Msa0146540 | Msa1126240 | 0.810866 | 9.313543e-51 | -8.615850e-47 |
| Msa0146540 | Msa1126450 | 0.808421 | 3.122647e-50 | -8.615850e-47 |
| Msa0146540 | Msa1130530 | 0.807819 | 4.195411e-50 | -8.615850e-47 |
| Msa0146540 | Msa1139890 | 0.813075 | 3.075358e-51 | -8.615850e-47 |
| Msa0146540 | Msa1143020 | 0.800654 | 1.302065e-48 | -8.615850e-47 |
| Msa0146540 | Msa1145810 | 0.832646 | 8.396106e-56 | -8.615850e-47 |
| Msa0146540 | Msa1158830 | 0.827041 | 1.947819e-54 | -8.615850e-47 |
| Msa0146540 | Msa1207310 | 0.804881 | 1.745975e-49 | -8.615850e-47 |
| Msa0146540 | Msa1225860 | -0.801376 | 9.272955e-49 | -8.615850e-47 |
| Msa0146540 | Msa1226470 | 0.802396 | 5.722411e-49 | -8.615850e-47 |
| Msa0146540 | Msa1227150 | 0.984804 | 1.225009e-161 | -8.615850e-47 |
| Msa0146540 | Msa1243870 | 0.820790 | 5.692861e-53 | -8.615850e-47 |
| Msa0146540 | Msa1250290 | 0.804996 | 1.651573e-49 | -8.615850e-47 |
| Msa0146540 | Msa1279420 | 0.809082 | 2.255571e-50 | -8.615850e-47 |
| Msa0146540 | Msa1284900 | 0.817549 | 3.113162e-52 | -8.615850e-47 |
| Msa0146540 | Msa1297290 | 0.810808 | 9.589927e-51 | -8.615850e-47 |
| Msa0146540 | Msa1307560 | 0.802621 | 5.142726e-49 | -8.615850e-47 |
| Msa0146540 | Msa1320820 | 0.813654 | 2.294141e-51 | -8.615850e-47 |
| Msa0146540 | Msa1328640 | 0.816975 | 4.191809e-52 | -8.615850e-47 |
| Msa0146540 | Msa1341490 | 0.804769 | 1.842347e-49 | -8.615850e-47 |
| Msa0146540 | Msa1345810 | 0.830107 | 3.538075e-55 | -8.615850e-47 |
| Msa0146540 | Msa1349520 | 0.818695 | 1.714111e-52 | -8.615850e-47 |
| Msa0146540 | Msa1353470 | 0.808880 | 2.492236e-50 | -8.615850e-47 |
| Msa0146540 | Msa1357080 | 0.823913 | 1.072380e-53 | -8.615850e-47 |
| Msa0146540 | Msa1357890 | 0.831286 | 1.819292e-55 | -8.615850e-47 |
| Msa0146540 | Msa1358070 | 0.806969 | 6.355263e-50 | -8.615850e-47 |
| Msa0146540 | Msa1358240 | 0.800516 | 1.389339e-48 | -8.615850e-47 |
| Msa0146540 | Msa1359560 | 0.852980 | 3.232724e-61 | -8.615850e-47 |
| Msa0146540 | Msa1360980 | 0.813934 | 1.990865e-51 | -8.615850e-47 |
| Msa0146540 | Msa1368360 | 0.801815 | 7.534017e-49 | -8.615850e-47 |
| Msa0146540 | Msa1368430 | 0.832414 | 9.582521e-56 | -8.615850e-47 |
| Msa0146540 | Msa1372150 | 0.826020 | 3.411182e-54 | -8.615850e-47 |
| Msa0146540 | Msa1376130 | 0.803657 | 3.139278e-49 | -8.615850e-47 |
| Msa0146540 | Msa1377570 | 0.805944 | 1.045084e-49 | -8.615850e-47 |
| Msa0146540 | Msa1383230 | 0.840620 | 7.791555e-58 | -8.615850e-47 |
| Msa0146540 | Msa1384870 | 0.801789 | 7.629232e-49 | -8.615850e-47 |
| Msa0146540 | Msa1385000 | 0.812342 | 4.450063e-51 | -8.615850e-47 |
| Msa0146540 | Msa1393840 | -0.802971 | 4.353924e-49 | -8.615850e-47 |
| Msa0146540 | Msa1394380 | 0.811953 | 5.410058e-51 | -8.615850e-47 |
| Msa0146540 | Msa1398090 | 0.833514 | 5.105420e-56 | -8.615850e-47 |
| Msa0146540 | Msa1407190 | 0.836209 | 1.070013e-56 | -8.615850e-47 |
| Msa0146540 | Msa1410420 | 0.820845 | 5.529499e-53 | -8.615850e-47 |
| Msa0146540 | Msa1412130 | 0.814674 | 1.365842e-51 | -8.615850e-47 |
| Msa0146540 | Msa1413610 | 0.812145 | 4.912844e-51 | -8.615850e-47 |
| Msa0146540 | Msa1424630 | 0.812040 | 5.178129e-51 | -8.615850e-47 |
| Msa0146540 | Msa1425260 | 0.813634 | 2.317649e-51 | -8.615850e-47 |
| Msa0146540 | Msa1426570 | 0.810823 | 9.514844e-51 | -8.615850e-47 |
| Msa0146540 | Msa1430550 | 0.823357 | 1.446896e-53 | -8.615850e-47 |
| Msa0146540 | Msa1432130 | 0.839006 | 2.051105e-57 | -8.615850e-47 |
| Msa0146540 | Msa1440740 | 0.801267 | 9.759781e-49 | -8.615850e-47 |
| Msa0146540 | Msa1446780 | 0.821620 | 3.665670e-53 | -8.615850e-47 |
| Msa0146540 | Msa1448560 | 0.809375 | 1.951842e-50 | -8.615850e-47 |
| Msa0146540 | Msa1454530 | 0.828908 | 6.919945e-55 | -8.615850e-47 |
| Msa0146540 | Msa1463900 | 0.833580 | 4.914540e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146540 | MtrunA17_Chr1g0155551 | 98.125 | 160 | 3 | 0 | 1 | 160 | 1 | 160 | 1.90e-115 | 323 |
| Msa0146540 | MtrunA17_Chr4g0035414 | 60.544 | 147 | 52 | 4 | 15 | 160 | 15 | 156 | 8.05e-55 | 170 |
| Msa0146540 | MtrunA17_Chr3g0144941 | 62.676 | 142 | 46 | 4 | 18 | 159 | 18 | 152 | 3.57e-48 | 153 |
| Msa0146540 | MtrunA17_Chr8g0378901 | 50.000 | 166 | 71 | 6 | 1 | 160 | 1 | 160 | 1.01e-42 | 139 |
| Msa0146540 | MtrunA17_Chr3g0141881 | 62.500 | 88 | 30 | 1 | 18 | 105 | 54 | 138 | 3.16e-32 | 112 |
| Msa0146540 | MtrunA17_Chr1g0194681 | 38.411 | 151 | 85 | 4 | 9 | 159 | 7 | 149 | 5.80e-24 | 91.3 |
| Msa0146540 | MtrunA17_Chr7g0225661 | 41.237 | 97 | 56 | 1 | 5 | 100 | 58 | 154 | 5.84e-17 | 74.3 |
| Msa0146540 | MtrunA17_Chr6g0456061 | 42.045 | 88 | 50 | 1 | 18 | 105 | 79 | 165 | 3.41e-16 | 72.4 |
| Msa0146540 | MtrunA17_Chr8g0341311 | 40.426 | 94 | 55 | 1 | 8 | 100 | 51 | 144 | 1.77e-15 | 70.1 |
| Msa0146540 | MtrunA17_Chr3g0139301 | 33.898 | 118 | 78 | 0 | 2 | 119 | 98 | 215 | 2.23e-15 | 71.6 |
| Msa0146540 | MtrunA17_Chr4g0054291 | 37.931 | 116 | 58 | 1 | 8 | 109 | 39 | 154 | 3.41e-15 | 68.9 |
| Msa0146540 | MtrunA17_Chr7g0220571 | 46.988 | 83 | 43 | 1 | 18 | 100 | 76 | 157 | 6.00e-15 | 68.9 |
| Msa0146540 | MtrunA17_Chr5g0400901 | 38.095 | 105 | 61 | 1 | 1 | 105 | 36 | 136 | 7.15e-13 | 62.8 |
| Msa0146540 | MtrunA17_Chr8g0369161 | 40.789 | 76 | 45 | 0 | 23 | 98 | 302 | 377 | 5.93e-12 | 62.4 |
| Msa0146540 | MtrunA17_Chr1g0152241 | 41.860 | 86 | 47 | 1 | 29 | 114 | 59 | 141 | 3.67e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146540 | AT1G75390.1 | 52.727 | 165 | 68 | 6 | 2 | 158 | 9 | 171 | 7.66e-48 | 153 |
| Msa0146540 | AT4G34590.1 | 56.618 | 136 | 57 | 1 | 27 | 160 | 24 | 159 | 5.45e-46 | 148 |
| Msa0146540 | AT2G18160.1 | 47.917 | 144 | 62 | 3 | 22 | 153 | 23 | 165 | 1.27e-35 | 122 |
| Msa0146540 | AT1G75390.2 | 62.887 | 97 | 32 | 3 | 2 | 94 | 9 | 105 | 2.48e-32 | 112 |
| Msa0146540 | AT3G62420.1 | 42.857 | 133 | 63 | 3 | 28 | 158 | 23 | 144 | 3.19e-25 | 94.7 |
| Msa0146540 | AT5G49450.1 | 38.519 | 135 | 71 | 5 | 27 | 154 | 13 | 142 | 6.27e-16 | 70.9 |
| Msa0146540 | AT5G38800.1 | 44.444 | 90 | 50 | 0 | 11 | 100 | 53 | 142 | 4.66e-15 | 68.9 |
| Msa0146540 | AT3G30530.1 | 45.946 | 74 | 40 | 0 | 27 | 100 | 78 | 151 | 1.15e-14 | 68.2 |
| Msa0146540 | AT2G04038.1 | 51.515 | 66 | 26 | 1 | 27 | 92 | 71 | 130 | 1.72e-14 | 67.4 |
| Msa0146540 | AT5G15830.1 | 34.545 | 110 | 72 | 0 | 27 | 136 | 71 | 180 | 2.40e-14 | 67.4 |
| Msa0146540 | AT1G13600.1 | 44.048 | 84 | 45 | 1 | 19 | 100 | 73 | 156 | 2.23e-13 | 65.1 |
| Msa0146540 | AT4G37730.1 | 43.750 | 80 | 37 | 2 | 17 | 88 | 176 | 255 | 1.44e-11 | 61.6 |
| Msa0146540 | AT1G68880.1 | 46.269 | 67 | 36 | 0 | 28 | 94 | 45 | 111 | 1.83e-11 | 58.9 |
| Msa0146540 | AT2G22850.1 | 47.561 | 82 | 32 | 2 | 28 | 109 | 127 | 197 | 4.88e-11 | 59.3 |
| Msa0146540 | AT2G22850.2 | 47.561 | 82 | 32 | 2 | 28 | 109 | 127 | 197 | 4.88e-11 | 59.3 |
| Msa0146540 | AT1G32150.1 | 44.304 | 79 | 40 | 2 | 18 | 92 | 281 | 359 | 6.43e-11 | 59.7 |
Find 23 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTAATCAACAACCAATTA+TGG | 0.294562 | 1_4:+6244992 | Msa0146540:CDS |
| AGGCAGAGAATTGTGTTCTA+AGG | 0.304006 | 1_4:+6244811 | Msa0146540:CDS |
| AACACCACAACAACTACTAA+TGG | 0.383416 | 1_4:+6244894 | Msa0146540:CDS |
| ATGTCTGCAGAGGCCATAAT+TGG | 0.394626 | 1_4:-6245005 | None:intergenic |
| GGAAGATTTGCAGCTTCAAA+TGG | 0.446632 | 1_4:+6244617 | Msa0146540:CDS |
| AAAGCAATCGAATCGCGAAT+CGG | 0.496834 | 1_4:+6244659 | Msa0146540:CDS |
| TATCCTATGGCCACATCTAG+TGG | 0.505899 | 1_4:+6244552 | None:intergenic |
| AACTCCATTAGTAGTTGTTG+TGG | 0.516849 | 1_4:-6244898 | None:intergenic |
| TCAACAAAATCTCAAAGCTA+TGG | 0.521179 | 1_4:+6244588 | Msa0146540:CDS |
| GGCAGAGAATTGTGTTCTAA+GGG | 0.540590 | 1_4:+6244812 | Msa0146540:CDS |
| TTCAAATGGATCAAAGAAAG+AGG | 0.542675 | 1_4:+6244631 | Msa0146540:CDS |
| TAGTTGTTGTGGTGTTGATG+AGG | 0.546016 | 1_4:-6244887 | None:intergenic |
| GCGAATCGGCAAGAAGATCA+AGG | 0.559935 | 1_4:+6244673 | Msa0146540:CDS |
| ACAACACTATCTTAAAATTG+AGG | 0.562515 | 1_4:+6244791 | Msa0146540:CDS |
| CGGCAAGAAGATCAAGGATG+AGG | 0.573196 | 1_4:+6244679 | Msa0146540:CDS |
| AAATGTGTGAACTTAATCAA+AGG | 0.582994 | 1_4:+6244838 | Msa0146540:CDS |
| ATCTCAAAGCTATGGCTCTG+AGG | 0.614327 | 1_4:+6244596 | Msa0146540:CDS |
| TTTCCACTAGATGTGGCCAT+AGG | 0.620229 | 1_4:-6244555 | None:intergenic |
| GATGAGGAAGCAGAAGCACA+TGG | 0.623986 | 1_4:+6244695 | Msa0146540:CDS |
| CCTCTGCAGACATGTTTATG+TGG | 0.636770 | 1_4:+6245015 | Msa0146540:CDS |
| ACTAGAGTTTCCACTAGATG+TGG | 0.653981 | 1_4:-6244562 | None:intergenic |
| CCACATAAACATGTCTGCAG+AGG | 0.669420 | 1_4:-6245015 | None:intergenic |
| AAAACAGTGAAATACTCACA+AGG | 0.723410 | 1_4:+6244754 | Msa0146540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACAACACTATCTTAAAATTG+AGG | + | chr1_4:6244791-6244810 | Msa0146540:CDS | 25.0% |
| ! | AAATGTGTGAACTTAATCAA+AGG | + | chr1_4:6244838-6244857 | Msa0146540:CDS | 25.0% |
| ! | TCTTAATCAACAACCAATTA+TGG | + | chr1_4:6244992-6245011 | Msa0146540:CDS | 25.0% |
| TCAACAAAATCTCAAAGCTA+TGG | + | chr1_4:6244588-6244607 | Msa0146540:CDS | 30.0% | |
| TTCAAATGGATCAAAGAAAG+AGG | + | chr1_4:6244631-6244650 | Msa0146540:CDS | 30.0% | |
| AAAACAGTGAAATACTCACA+AGG | + | chr1_4:6244754-6244773 | Msa0146540:CDS | 30.0% | |
| AACACCACAACAACTACTAA+TGG | + | chr1_4:6244894-6244913 | Msa0146540:CDS | 35.0% | |
| AACTCCATTAGTAGTTGTTG+TGG | - | chr1_4:6244901-6244920 | None:intergenic | 35.0% | |
| ACTAGAGTTTCCACTAGATG+TGG | - | chr1_4:6244565-6244584 | None:intergenic | 40.0% | |
| GGAAGATTTGCAGCTTCAAA+TGG | + | chr1_4:6244617-6244636 | Msa0146540:CDS | 40.0% | |
| AAAGCAATCGAATCGCGAAT+CGG | + | chr1_4:6244659-6244678 | Msa0146540:CDS | 40.0% | |
| AGGCAGAGAATTGTGTTCTA+AGG | + | chr1_4:6244811-6244830 | Msa0146540:CDS | 40.0% | |
| GGCAGAGAATTGTGTTCTAA+GGG | + | chr1_4:6244812-6244831 | Msa0146540:CDS | 40.0% | |
| !! | TAGTTGTTGTGGTGTTGATG+AGG | - | chr1_4:6244890-6244909 | None:intergenic | 40.0% |
| ! | ATCTCAAAGCTATGGCTCTG+AGG | + | chr1_4:6244596-6244615 | Msa0146540:CDS | 45.0% |
| ATGTCTGCAGAGGCCATAAT+TGG | - | chr1_4:6245008-6245027 | None:intergenic | 45.0% | |
| CCACATAAACATGTCTGCAG+AGG | - | chr1_4:6245018-6245037 | None:intergenic | 45.0% | |
| CCTCTGCAGACATGTTTATG+TGG | + | chr1_4:6245015-6245034 | Msa0146540:CDS | 45.0% | |
| GCGAATCGGCAAGAAGATCA+AGG | + | chr1_4:6244673-6244692 | Msa0146540:CDS | 50.0% | |
| CGGCAAGAAGATCAAGGATG+AGG | + | chr1_4:6244679-6244698 | Msa0146540:CDS | 50.0% | |
| ! | GATGAGGAAGCAGAAGCACA+TGG | + | chr1_4:6244695-6244714 | Msa0146540:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 6244558 | 6245040 | 6244558 | ID=Msa0146540;Name=Msa0146540 |
| chr1_4 | mRNA | 6244558 | 6245040 | 6244558 | ID=Msa0146540-mRNA-1;Parent=Msa0146540;Name=Msa0146540-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|160 |
| chr1_4 | exon | 6244558 | 6245040 | 6244558 | ID=Msa0146540-mRNA-1:exon:2697;Parent=Msa0146540-mRNA-1 |
| chr1_4 | CDS | 6244558 | 6245040 | 6244558 | ID=Msa0146540-mRNA-1:cds;Parent=Msa0146540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
