Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234910 | XP_013444474.1 | 94.836 | 213 | 11 | 0 | 198 | 410 | 23 | 235 | 2.67e-142 | 415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234910 | sp|A0A072TLV8|NGR_MEDTR | 88.559 | 236 | 22 | 2 | 1 | 234 | 1 | 233 | 5.44e-135 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234910 | I3T425 | 94.836 | 213 | 11 | 0 | 198 | 410 | 23 | 235 | 1.27e-142 | 415 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1234910 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0667780 | Msa1234910 | 0.808553 | 2.927326e-50 | -8.615850e-47 |
| Msa0667800 | Msa1234910 | 0.809345 | 1.981092e-50 | -8.615850e-47 |
| Msa0758250 | Msa1234910 | 0.812191 | 4.799928e-51 | -8.615850e-47 |
| Msa0814710 | Msa1234910 | 0.804460 | 2.136966e-49 | -8.615850e-47 |
| Msa0837870 | Msa1234910 | 0.808107 | 3.644063e-50 | -8.615850e-47 |
| Msa0234590 | Msa1234910 | 0.807495 | 4.916684e-50 | -8.615850e-47 |
| Msa1234910 | Msa1276810 | 0.909063 | 8.616000e-82 | -8.615850e-47 |
| Msa1234910 | Msa1307210 | 0.801558 | 8.506880e-49 | -8.615850e-47 |
| Msa1234910 | Msa1314960 | 0.902393 | 1.014670e-78 | -8.615850e-47 |
| Msa1234910 | Msa1321050 | 0.831149 | 1.965900e-55 | -8.615850e-47 |
| Msa1234910 | Msa1379700 | 0.802644 | 5.086566e-49 | -8.615850e-47 |
| Msa0388670 | Msa1234910 | 0.804872 | 1.753551e-49 | -8.615850e-47 |
| Msa0429090 | Msa1234910 | 0.802292 | 6.013136e-49 | -8.615850e-47 |
| Msa1034700 | Msa1234910 | 0.824657 | 7.167421e-54 | -8.615850e-47 |
| Msa1081200 | Msa1234910 | 0.828709 | 7.733320e-55 | -8.615850e-47 |
| Msa1162060 | Msa1234910 | 0.821462 | 3.986564e-53 | -8.615850e-47 |
| Msa1174800 | Msa1234910 | 0.882554 | 9.448210e-71 | -8.615850e-47 |
| Msa0532970 | Msa1234910 | 0.806104 | 9.671400e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234910 | MtrunA17_Chr8g0344481 | 94.836 | 213 | 11 | 0 | 198 | 410 | 23 | 235 | 2.45e-146 | 415 |
| Msa1234910 | MtrunA17_Chr8g0344431 | 88.559 | 236 | 22 | 2 | 1 | 234 | 1 | 233 | 4.01e-136 | 390 |
| Msa1234910 | MtrunA17_Chr2g0301131 | 30.045 | 223 | 117 | 7 | 195 | 385 | 21 | 236 | 6.05e-17 | 80.1 |
| Msa1234910 | MtrunA17_Chr5g0399881 | 33.071 | 127 | 70 | 4 | 260 | 383 | 24 | 138 | 2.47e-13 | 67.8 |
| Msa1234910 | MtrunA17_Chr5g0399861 | 31.538 | 130 | 68 | 3 | 260 | 383 | 24 | 138 | 2.91e-12 | 64.7 |
| Msa1234910 | MtrunA17_Chr5g0399851 | 30.508 | 118 | 79 | 1 | 266 | 383 | 7 | 121 | 1.59e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234910 | AT1G72490.2 | 54.393 | 239 | 68 | 7 | 1 | 206 | 1 | 231 | 3.63e-74 | 233 |
| Msa1234910 | AT1G72490.1 | 54.393 | 239 | 68 | 7 | 1 | 206 | 1 | 231 | 3.63e-74 | 233 |
| Msa1234910 | AT1G17400.3 | 54.310 | 232 | 74 | 9 | 1 | 202 | 1 | 230 | 2.99e-68 | 216 |
| Msa1234910 | AT1G17400.1 | 53.498 | 243 | 78 | 10 | 1 | 213 | 1 | 238 | 3.82e-68 | 218 |
| Msa1234910 | AT1G17400.2 | 53.498 | 243 | 78 | 10 | 1 | 213 | 1 | 238 | 3.82e-68 | 218 |
| Msa1234910 | AT1G72490.3 | 53.881 | 219 | 62 | 7 | 27 | 213 | 25 | 236 | 3.75e-63 | 205 |
| Msa1234910 | AT1G72450.1 | 32.093 | 215 | 116 | 7 | 195 | 387 | 8 | 214 | 4.82e-17 | 81.3 |
| Msa1234910 | AT1G17380.1 | 31.776 | 214 | 111 | 8 | 195 | 387 | 14 | 213 | 6.81e-15 | 75.1 |
| Msa1234910 | AT1G19180.1 | 30.180 | 222 | 123 | 7 | 189 | 384 | 13 | 228 | 5.07e-13 | 68.9 |
| Msa1234910 | AT1G19180.3 | 30.180 | 222 | 123 | 7 | 189 | 384 | 13 | 228 | 5.07e-13 | 68.9 |
| Msa1234910 | AT1G74950.1 | 28.634 | 227 | 134 | 8 | 199 | 398 | 18 | 243 | 5.70e-13 | 68.9 |
| Msa1234910 | AT1G17380.2 | 34.194 | 155 | 77 | 5 | 274 | 405 | 63 | 215 | 1.64e-12 | 67.4 |
| Msa1234910 | AT1G19180.2 | 35.345 | 116 | 71 | 3 | 271 | 384 | 49 | 162 | 6.45e-12 | 64.7 |
| Msa1234910 | AT1G72450.2 | 30.049 | 203 | 112 | 6 | 195 | 375 | 8 | 202 | 1.30e-11 | 63.9 |
Find 92 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGCTTTCTTTGGGAAAA+TGG | 0.109042 | 8_2:-12651362 | Msa1234910:CDS |
| TTGAAGGAAAAGAGAATTTC+TGG | 0.175716 | 8_2:-12651394 | Msa1234910:CDS |
| GATCCTCTTGTTGTGTATTT+TGG | 0.179146 | 8_2:+12652197 | None:intergenic |
| AAGGCCACAACAATCTTCTT+AGG | 0.212839 | 8_2:+12649187 | None:intergenic |
| GATTCTACACCTGCTTTCTT+TGG | 0.212849 | 8_2:-12651370 | Msa1234910:CDS |
| TTTAGTTCATCTTGAACTTT+AGG | 0.228550 | 8_2:-12649253 | Msa1234910:three_prime_UTR |
| TTAAGAAGTGAAGCTCTTCT+TGG | 0.236604 | 8_2:+12649520 | None:intergenic |
| CAATTGACGATATTCTATTC+TGG | 0.252458 | 8_2:-12649885 | Msa1234910:CDS |
| GTGTTTGTTTGAGGAATTTC+GGG | 0.278263 | 8_2:+12649723 | None:intergenic |
| AACTAATTTACCTGAACATT+TGG | 0.278582 | 8_2:+12649668 | None:intergenic |
| TCCTTGTTCGGTTGTTTCTA+AGG | 0.284638 | 8_2:+12649698 | None:intergenic |
| GACTTCACTCCTGAAGAAAT+TGG | 0.292016 | 8_2:-12652151 | Msa1234910:CDS |
| TTACTAGCAATTGGAACATT+TGG | 0.292649 | 8_2:-12652253 | Msa1234910:CDS |
| AGTGTTTGTTTGAGGAATTT+CGG | 0.311669 | 8_2:+12649722 | None:intergenic |
| TGATCGGAAGAATTATCTTT+AGG | 0.316360 | 8_2:+12649298 | None:intergenic |
| ACTTTAGGTTATACATGTTT+TGG | 0.324420 | 8_2:-12649238 | Msa1234910:three_prime_UTR |
| AGAGGACCCTATCAAATTAA+TGG | 0.329656 | 8_2:-12649355 | Msa1234910:CDS |
| TTTGTGACCATTAATTTGAT+AGG | 0.341555 | 8_2:+12649348 | None:intergenic |
| TATTATGTTATCAATCAATT+AGG | 0.344670 | 8_2:-12649122 | Msa1234910:three_prime_UTR |
| TTTGGCTTGGTTTCCTTGTT+CGG | 0.349316 | 8_2:+12649686 | None:intergenic |
| CCTCATAGTTTACTAGCAAT+TGG | 0.353094 | 8_2:-12652262 | Msa1234910:CDS |
| CTATCAACCTCCAAGCTTGA+TGG | 0.357725 | 8_2:+12652034 | None:intergenic |
| CATCAAGCTTGGAGGTTGAT+AGG | 0.369501 | 8_2:-12652033 | Msa1234910:CDS |
| TAAGACTAGGAGTATGAATA+AGG | 0.377789 | 8_2:+12653171 | None:intergenic |
| ATTCTACACCTGCTTTCTTT+GGG | 0.379166 | 8_2:-12651369 | Msa1234910:CDS |
| AATCTTCTTAGGGCATAGTT+AGG | 0.380172 | 8_2:+12649198 | None:intergenic |
| GTCACTTGTAGTTCTTCAAC+TGG | 0.388990 | 8_2:-12653010 | Msa1234910:intron |
| GGAAACCAAGCCAAATGTTC+AGG | 0.389691 | 8_2:-12649678 | Msa1234910:intron |
| TCAATTAGGTCCAATGCTTT+CGG | 0.391973 | 8_2:-12649108 | Msa1234910:three_prime_UTR |
| AATGCACTTTGCAGTGAATC+AGG | 0.396272 | 8_2:-12652001 | Msa1234910:CDS |
| CACTAGTGACCGGTGCACTT+GGG | 0.400373 | 8_2:+12649760 | None:intergenic |
| AATTGACGATATTCTATTCT+GGG | 0.405626 | 8_2:-12649884 | Msa1234910:CDS |
| AGACTAATTAATTACCTTCA+TGG | 0.410202 | 8_2:+12653139 | None:intergenic |
| CTAAATTCTTCTCTAGGCTC+TGG | 0.410843 | 8_2:+12652292 | None:intergenic |
| AAGATGTTTGTTTGTAGAAG+TGG | 0.411629 | 8_2:-12651857 | Msa1234910:CDS |
| TCACTAGTGACCGGTGCACT+TGG | 0.422956 | 8_2:+12649759 | None:intergenic |
| ACTCTTGAAGAGTATCTCTA+AGG | 0.428486 | 8_2:+12651816 | None:intergenic |
| TAAATCTATATGAAGATTGA+AGG | 0.439481 | 8_2:+12649168 | None:intergenic |
| AACTAAATCACTATAAGTTA+AGG | 0.443726 | 8_2:+12649269 | None:intergenic |
| CTAGAGAAGAATTTAGTGAT+TGG | 0.455996 | 8_2:-12652285 | Msa1234910:CDS |
| TCTAAGGCAGTGTTTGTTTG+AGG | 0.469946 | 8_2:+12649714 | None:intergenic |
| TTTGGGAAAATGGAACCTAA+AGG | 0.472484 | 8_2:-12651352 | Msa1234910:intron |
| ATTTCTTCAGGAGTGAAGTC+TGG | 0.473818 | 8_2:+12652154 | None:intergenic |
| TCTTAACTGTCCATCAAGCT+TGG | 0.475892 | 8_2:-12652044 | Msa1234910:CDS |
| TTGTGACCATTAATTTGATA+GGG | 0.477946 | 8_2:+12649349 | None:intergenic |
| AACTGGATGCAAAATAAACT+TGG | 0.478932 | 8_2:-12652993 | Msa1234910:CDS |
| GACAGTTAAGAAATCTATCA+AGG | 0.483619 | 8_2:+12652056 | None:intergenic |
| ACTAGTGACCGGTGCACTTG+GGG | 0.487227 | 8_2:+12649761 | None:intergenic |
| TACGAATGCAACTGAGATCA+TGG | 0.488655 | 8_2:-12649832 | Msa1234910:CDS |
| AGAAATTGGAAAACTACAAA+AGG | 0.505163 | 8_2:-12652137 | Msa1234910:CDS |
| TACTCTTCAAGAGTCAAGAA+TGG | 0.506211 | 8_2:-12651807 | Msa1234910:CDS |
| TAACTGTCCATCAAGCTTGG+AGG | 0.510024 | 8_2:-12652041 | Msa1234910:CDS |
| AGGCCACAACAATCTTCTTA+GGG | 0.511789 | 8_2:+12649188 | None:intergenic |
| CCAACATGCAAAACTCAGAT+GGG | 0.513652 | 8_2:-12651020 | Msa1234910:CDS |
| ATTTACCTGAACATTTGGCT+TGG | 0.519424 | 8_2:+12649673 | None:intergenic |
| CAATCACTAAATTCTTCTCT+AGG | 0.521496 | 8_2:+12652286 | None:intergenic |
| GTATTAGACTTCTTAATGCA+AGG | 0.531343 | 8_2:+12650943 | None:intergenic |
| TGAATCTCTTCCTCAGCTTG+TGG | 0.531942 | 8_2:-12650971 | Msa1234910:CDS |
| GCCAACATGCAAAACTCAGA+TGG | 0.537855 | 8_2:-12651021 | Msa1234910:CDS |
| TTAATTACCTTCATGGTGGA+AGG | 0.543788 | 8_2:+12653146 | None:intergenic |
| AAACCAAAATACACAACAAG+AGG | 0.544025 | 8_2:-12652200 | Msa1234910:CDS |
| CCAATTGCTAGTAAACTATG+AGG | 0.549287 | 8_2:+12652262 | None:intergenic |
| CTAGTGACCGGTGCACTTGG+GGG | 0.549856 | 8_2:+12649762 | None:intergenic |
| AGGAGTATGAATAAGGACTA+AGG | 0.551958 | 8_2:+12653178 | None:intergenic |
| TGCAACTGAGATCATGGAGT+TGG | 0.557096 | 8_2:-12649826 | Msa1234910:CDS |
| TAAGTTAAGGTCGAATTGAT+CGG | 0.557387 | 8_2:+12649282 | None:intergenic |
| GTCTGGTACTTCTTCTGAAG+AGG | 0.559918 | 8_2:+12652171 | None:intergenic |
| TGGATGCAAAATAAACTTGG+TGG | 0.565754 | 8_2:-12652990 | Msa1234910:CDS |
| TCTTAGTCCTTCCACCATGA+AGG | 0.569632 | 8_2:-12653153 | Msa1234910:intron |
| GTATCTCTAAGGCTAGGTGT+TGG | 0.570674 | 8_2:+12651827 | None:intergenic |
| GGTACTTCTTCTGAAGAGGA+TGG | 0.573771 | 8_2:+12652175 | None:intergenic |
| ACAGTTAAGAAATCTATCAA+GGG | 0.578800 | 8_2:+12652057 | None:intergenic |
| TCAAGAGTCAAGAATGGAGA+AGG | 0.580987 | 8_2:-12651801 | Msa1234910:intron |
| TTCTTGAGAAAAGAAAAGAA+AGG | 0.582036 | 8_2:-12649495 | Msa1234910:intron |
| GAATAGAATATCGTCAATTG+TGG | 0.583205 | 8_2:+12649888 | None:intergenic |
| GGATGCAAAATAAACTTGGT+GGG | 0.583613 | 8_2:-12652989 | Msa1234910:CDS |
| GCCTTAGAAACAACCGAACA+AGG | 0.584084 | 8_2:-12649699 | Msa1234910:CDS |
| ATGATCTCAGTTGCATTCGT+AGG | 0.602248 | 8_2:+12649834 | None:intergenic |
| TGTTGCAGGGTCATTGCTAG+AGG | 0.603165 | 8_2:-12649373 | Msa1234910:intron |
| TGAAGAGTATCTCTAAGGCT+AGG | 0.605050 | 8_2:+12651821 | None:intergenic |
| AGTTAACAAAACTCTTAAGA+CGG | 0.616742 | 8_2:-12652114 | Msa1234910:CDS |
| CAACATGCAAAACTCAGATG+GGG | 0.638179 | 8_2:-12651019 | Msa1234910:CDS |
| GCATTAAGAAGTCTAATACA+AGG | 0.639363 | 8_2:-12650939 | Msa1234910:intron |
| ATGCCCTAAGAAGATTGTTG+TGG | 0.644601 | 8_2:-12649191 | Msa1234910:three_prime_UTR |
| AGTATGAATAAGGACTAAGG+AGG | 0.646367 | 8_2:+12653181 | None:intergenic |
| CTAATTAATTACCTTCATGG+TGG | 0.651054 | 8_2:+12653142 | None:intergenic |
| ATGGTGGAAGGACTAAGACT+AGG | 0.652152 | 8_2:+12653158 | None:intergenic |
| ATCAGGTGGTGACAAAGATG+AGG | 0.660561 | 8_2:-12651984 | Msa1234910:CDS |
| CAGTTAAGAAATCTATCAAG+GGG | 0.661606 | 8_2:+12652058 | None:intergenic |
| AACATGCAAAACTCAGATGG+GGG | 0.692839 | 8_2:-12651018 | Msa1234910:CDS |
| TTAGCCTCTGAAAATCCAAG+CGG | 0.722831 | 8_2:-12649795 | Msa1234910:CDS |
| GCACTTTGCAGTGAATCAGG+TGG | 0.746356 | 8_2:-12651998 | Msa1234910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAAAATTAAATA+AGG | + | chr8_2:12650979-12650998 | None:intergenic | 0.0% |
| !! | TTATATGTAAGTTATATTAA+AGG | - | chr8_2:12649784-12649803 | Msa1234910:CDS | 10.0% |
| !! | ATAATATGAAGAAATTTAAT+TGG | - | chr8_2:12649820-12649839 | Msa1234910:CDS | 10.0% |
| !!! | ATTATTATTTTGTTACAAAA+TGG | - | chr8_2:12650990-12651009 | Msa1234910:CDS | 10.0% |
| !! | AACATATAAAGTAACAATAA+AGG | + | chr8_2:12649086-12649105 | None:intergenic | 15.0% |
| !!! | AGTTTTAATTTAAAACTATG+TGG | + | chr8_2:12649460-12649479 | None:intergenic | 15.0% |
| !!! | AGGAATTTTTTGTAAAAAAA+AGG | + | chr8_2:12650413-12650432 | None:intergenic | 15.0% |
| !!! | TTAATGTTTTATTTCTTACT+TGG | - | chr8_2:12650882-12650901 | Msa1234910:intron | 15.0% |
| !!! | TTTAGTATTGGAAAATTATT+GGG | - | chr8_2:12651022-12651041 | Msa1234910:CDS | 15.0% |
| !!! | ATATTGGTTAGAATAATAAT+TGG | - | chr8_2:12651862-12651881 | Msa1234910:CDS | 15.0% |
| !!! | TGTAAATTAATTTTATTGTG+AGG | + | chr8_2:12652117-12652136 | None:intergenic | 15.0% |
| !!! | TTTAGAGTATCATTTTATTT+TGG | + | chr8_2:12652141-12652160 | None:intergenic | 15.0% |
| !! | AAATATATATTGTAAGAGTT+TGG | - | chr8_2:12652217-12652236 | Msa1234910:CDS | 15.0% |
| !! | TATTATGTTATCAATCAATT+AGG | - | chr8_2:12653064-12653083 | Msa1234910:intron | 15.0% |
| !! | ACATATAAGTATTTATGGAT+AGG | + | chr8_2:12649703-12649722 | None:intergenic | 20.0% |
| !! | GCTTAACATATAAGTATTTA+TGG | + | chr8_2:12649708-12649727 | None:intergenic | 20.0% |
| !! | TTGACAATTATTTGTATCTT+TGG | - | chr8_2:12649852-12649871 | Msa1234910:CDS | 20.0% |
| !!! | GTTTAGTATTGGAAAATTAT+TGG | - | chr8_2:12651021-12651040 | Msa1234910:CDS | 20.0% |
| !!! | ATTTACATGGAAAAACATTT+TGG | + | chr8_2:12651381-12651400 | None:intergenic | 20.0% |
| !!! | AATGTTTTTCCATGTAAATT+AGG | - | chr8_2:12651382-12651401 | Msa1234910:CDS | 20.0% |
| !! | TAGATCTATTTATAACAAAG+TGG | - | chr8_2:12651491-12651510 | Msa1234910:intron | 20.0% |
| !! | GATCAAAACGATAAATAATT+TGG | - | chr8_2:12651791-12651810 | Msa1234910:intron | 20.0% |
| !! | AAGGAAATAAAATAAACAGA+CGG | + | chr8_2:12652743-12652762 | None:intergenic | 20.0% |
| !! | AACTAAATCACTATAAGTTA+AGG | + | chr8_2:12652920-12652939 | None:intergenic | 20.0% |
| !! | TAAATCTATATGAAGATTGA+AGG | + | chr8_2:12653021-12653040 | None:intergenic | 20.0% |
| ! | AGACTAATTAATTACCTTCA+TGG | + | chr8_2:12649050-12649069 | None:intergenic | 25.0% |
| ! | TAACAATAAAGGTTGCAAAA+TGG | + | chr8_2:12649075-12649094 | None:intergenic | 25.0% |
| ! | TGAGACAAATACATGTTATT+GGG | + | chr8_2:12649299-12649318 | None:intergenic | 25.0% |
| ! | ATGAGACAAATACATGTTAT+TGG | + | chr8_2:12649300-12649319 | None:intergenic | 25.0% |
| ! | AAACACATACTTCAAAATGA+AGG | - | chr8_2:12649328-12649347 | Msa1234910:CDS | 25.0% |
| !!! | TACATGTCTTTTTTTGCTTA+AGG | - | chr8_2:12649401-12649420 | Msa1234910:intron | 25.0% |
| !!! | ACATGTCTTTTTTTGCTTAA+GGG | - | chr8_2:12649402-12649421 | Msa1234910:intron | 25.0% |
| ! | TAAAAGACCAATGTTATGTT+TGG | - | chr8_2:12649479-12649498 | Msa1234910:intron | 25.0% |
| !!! | AATAAGCTGAAAGTATCTTA+TGG | + | chr8_2:12649590-12649609 | None:intergenic | 25.0% |
| !! | TATTTTCATAAGTTATCCCA+AGG | + | chr8_2:12649623-12649642 | None:intergenic | 25.0% |
| ! | ATATGTTAAGCGTTTATGAT+AGG | - | chr8_2:12649717-12649736 | Msa1234910:CDS | 25.0% |
| ! | TTATTTGTATCTTTGGATTG+TGG | - | chr8_2:12649859-12649878 | Msa1234910:CDS | 25.0% |
| ! | AGAAATTGGAAAACTACAAA+AGG | - | chr8_2:12650049-12650068 | Msa1234910:intron | 25.0% |
| ! | AGTTAACAAAACTCTTAAGA+CGG | - | chr8_2:12650072-12650091 | Msa1234910:intron | 25.0% |
| ! | ACAGTTAAGAAATCTATCAA+GGG | + | chr8_2:12650132-12650151 | None:intergenic | 25.0% |
| ! | GAAAAAAGCAAGAAATCAAT+TGG | - | chr8_2:12650278-12650297 | Msa1234910:intron | 25.0% |
| !! | AACCTTCTAATTTGTCAATT+CGG | - | chr8_2:12650442-12650461 | Msa1234910:intron | 25.0% |
| ! | TTAGCAAATCAATGACTATT+GGG | - | chr8_2:12650486-12650505 | Msa1234910:intron | 25.0% |
| ! | AAGAGAAAGATTATACCTTT+AGG | + | chr8_2:12650852-12650871 | None:intergenic | 25.0% |
| !! | ATAATCTTTCTCTTGTTTCA+TGG | - | chr8_2:12650858-12650877 | Msa1234910:intron | 25.0% |
| ! | AACCAAACAATTAATTGACA+AGG | + | chr8_2:12650943-12650962 | None:intergenic | 25.0% |
| ! | TTGTTACAAAATGGATGATT+TGG | - | chr8_2:12650999-12651018 | Msa1234910:CDS | 25.0% |
| !! | ATGTAAATTAGGTTAGTCAT+GGG | - | chr8_2:12651393-12651412 | Msa1234910:CDS | 25.0% |
| !!! | GATACAATTCAGTTTTGAAA+AGG | - | chr8_2:12651428-12651447 | Msa1234910:intron | 25.0% |
| ! | ATCTTGATTAAAACAATCGT+CGG | - | chr8_2:12651572-12651591 | Msa1234910:intron | 25.0% |
| !! | AACAGATCTATACTTCTTTT+TGG | + | chr8_2:12651640-12651659 | None:intergenic | 25.0% |
| !!! | AATCTTTCATTTTGATCTTG+TGG | + | chr8_2:12651949-12651968 | None:intergenic | 25.0% |
| !! | AGATTTGTTTGATTGAAAAG+AGG | - | chr8_2:12651964-12651983 | Msa1234910:CDS | 25.0% |
| !! | AGGTTGAAGTATTAATGATA+TGG | + | chr8_2:12652017-12652036 | None:intergenic | 25.0% |
| !! | TACATGTTAGTGATCAATTT+TGG | + | chr8_2:12652046-12652065 | None:intergenic | 25.0% |
| ! | CTAACATGTATGTAAGAAAA+AGG | - | chr8_2:12652056-12652075 | Msa1234910:CDS | 25.0% |
| ! | ATAAACAACAATAAGAACAC+TGG | + | chr8_2:12652248-12652267 | None:intergenic | 25.0% |
| ! | AATTGACGATATTCTATTCT+GGG | - | chr8_2:12652302-12652321 | Msa1234910:CDS | 25.0% |
| !!! | TTTAATTTTTCACTAGTGAC+CGG | + | chr8_2:12652439-12652458 | None:intergenic | 25.0% |
| ! | AACTAATTTACCTGAACATT+TGG | + | chr8_2:12652521-12652540 | None:intergenic | 25.0% |
| ! | TTCTTGAGAAAAGAAAAGAA+AGG | - | chr8_2:12652691-12652710 | Msa1234910:intron | 25.0% |
| ! | CAAAAATAGACAACATACAA+AGG | + | chr8_2:12652762-12652781 | None:intergenic | 25.0% |
| !!! | TGTATGTTGTCTATTTTTGT+TGG | - | chr8_2:12652763-12652782 | Msa1234910:intron | 25.0% |
| ! | CAAGATTCAATTAATTAGCA+TGG | + | chr8_2:12652790-12652809 | None:intergenic | 25.0% |
| !! | TTGTGACCATTAATTTGATA+GGG | + | chr8_2:12652840-12652859 | None:intergenic | 25.0% |
| !! | TTTGTGACCATTAATTTGAT+AGG | + | chr8_2:12652841-12652860 | None:intergenic | 25.0% |
| ! | AATTAATGGTCACAAAAATG+AGG | - | chr8_2:12652845-12652864 | Msa1234910:intron | 25.0% |
| ! | ATTAATGGTCACAAAAATGA+GGG | - | chr8_2:12652846-12652865 | Msa1234910:intron | 25.0% |
| !! | TTTAGTTCATCTTGAACTTT+AGG | - | chr8_2:12652933-12652952 | Msa1234910:intron | 25.0% |
| !!! | ACTTTAGGTTATACATGTTT+TGG | - | chr8_2:12652948-12652967 | Msa1234910:CDS | 25.0% |
| ! | TAAGACTAGGAGTATGAATA+AGG | + | chr8_2:12649018-12649037 | None:intergenic | 30.0% |
| CTAATTAATTACCTTCATGG+TGG | + | chr8_2:12649047-12649066 | None:intergenic | 30.0% | |
| CATATCAATCATGCTACATT+AGG | + | chr8_2:12649150-12649169 | None:intergenic | 30.0% | |
| AACTGGATGCAAAATAAACT+TGG | - | chr8_2:12649193-12649212 | Msa1234910:three_prime_UTR | 30.0% | |
| GAGACAAATACATGTTATTG+GGG | + | chr8_2:12649298-12649317 | None:intergenic | 30.0% | |
| AGTTAGTCCAAACATAACAT+TGG | + | chr8_2:12649489-12649508 | None:intergenic | 30.0% | |
| ATAGGCTATTTATCCAAACA+TGG | - | chr8_2:12649735-12649754 | Msa1234910:CDS | 30.0% | |
| !! | TGTTTCATTTTAGCCATGTT+TGG | + | chr8_2:12649751-12649770 | None:intergenic | 30.0% |
| CAATCACTAAATTCTTCTCT+AGG | + | chr8_2:12649903-12649922 | None:intergenic | 30.0% | |
| CTAGAGAAGAATTTAGTGAT+TGG | - | chr8_2:12649901-12649920 | Msa1234910:CDS | 30.0% | |
| TTACTAGCAATTGGAACATT+TGG | - | chr8_2:12649933-12649952 | Msa1234910:intron | 30.0% | |
| AAACCAAAATACACAACAAG+AGG | - | chr8_2:12649986-12650005 | Msa1234910:intron | 30.0% | |
| ! | TGTAGTTTTCCAATTTCTTC+AGG | + | chr8_2:12650047-12650066 | None:intergenic | 30.0% |
| !!! | GAAATCTCTTTTTCAACGTT+TGG | + | chr8_2:12650101-12650120 | None:intergenic | 30.0% |
| CAGTTAAGAAATCTATCAAG+GGG | + | chr8_2:12650131-12650150 | None:intergenic | 30.0% | |
| GACAGTTAAGAAATCTATCA+AGG | + | chr8_2:12650133-12650152 | None:intergenic | 30.0% | |
| AAGATGTTTGTTTGTAGAAG+TGG | - | chr8_2:12650329-12650348 | Msa1234910:intron | 30.0% | |
| ATTAGAAGGTTATGAGTAAG+AGG | + | chr8_2:12650433-12650452 | None:intergenic | 30.0% | |
| ATCCGAATTGACAAATTAGA+AGG | + | chr8_2:12650447-12650466 | None:intergenic | 30.0% | |
| GTTAGCAAATCAATGACTAT+TGG | - | chr8_2:12650485-12650504 | Msa1234910:intron | 30.0% | |
| TGTGAAAATTTGAACTTCTC+CGG | + | chr8_2:12650747-12650766 | None:intergenic | 30.0% | |
| TTGAAGGAAAAGAGAATTTC+TGG | - | chr8_2:12650792-12650811 | Msa1234910:intron | 30.0% | |
| TGCCTTGTCAATTAATTGTT+TGG | - | chr8_2:12650938-12650957 | Msa1234910:intron | 30.0% | |
| !! | TGGATGATTTGGTTTAGTAT+TGG | - | chr8_2:12651010-12651029 | Msa1234910:CDS | 30.0% |
| ! | ATTTTGCTGATCGTGTTTTT+TGG | - | chr8_2:12651106-12651125 | Msa1234910:intron | 30.0% |
| !! | GATTTTTCTAGCAAGTACAA+AGG | - | chr8_2:12651134-12651153 | Msa1234910:intron | 30.0% |
| GTATTAGACTTCTTAATGCA+AGG | + | chr8_2:12651246-12651265 | None:intergenic | 30.0% | |
| GCATTAAGAAGTCTAATACA+AGG | - | chr8_2:12651247-12651266 | Msa1234910:intron | 30.0% | |
| !! | TGGAAAAACATTTTGGTAGT+AGG | + | chr8_2:12651374-12651393 | None:intergenic | 30.0% |
| CATGACTAACCTAATTTACA+TGG | + | chr8_2:12651394-12651413 | None:intergenic | 30.0% | |
| ! | CATGTAAATTAGGTTAGTCA+TGG | - | chr8_2:12651392-12651411 | Msa1234910:CDS | 30.0% |
| TTAGCAAAAGTCGAATTGTT+TGG | - | chr8_2:12651673-12651692 | Msa1234910:intron | 30.0% | |
| TAGCAAAAGTCGAATTGTTT+GGG | - | chr8_2:12651674-12651693 | Msa1234910:intron | 30.0% | |
| !! | GTTTTGATCTTCTAGTCTAA+GGG | + | chr8_2:12651780-12651799 | None:intergenic | 30.0% |
| !!! | GTTAGTGATCAATTTTGGTT+GGG | + | chr8_2:12652041-12652060 | None:intergenic | 30.0% |
| !! | TGTTAGTGATCAATTTTGGT+TGG | + | chr8_2:12652042-12652061 | None:intergenic | 30.0% |
| ! | AGGTATTGTTGTGTTAAGTT+TGG | - | chr8_2:12652076-12652095 | Msa1234910:CDS | 30.0% |
| GAATAGAATATCGTCAATTG+TGG | + | chr8_2:12652301-12652320 | None:intergenic | 30.0% | |
| CAATTGACGATATTCTATTC+TGG | - | chr8_2:12652301-12652320 | Msa1234910:CDS | 30.0% | |
| GGTCACTAGTGAAAAATTAA+AGG | - | chr8_2:12652438-12652457 | Msa1234910:intron | 30.0% | |
| AGTGTTTGTTTGAGGAATTT+CGG | + | chr8_2:12652467-12652486 | None:intergenic | 30.0% | |
| TTGCATGCTTTGTAATGTTT+CGG | + | chr8_2:12652590-12652609 | None:intergenic | 30.0% | |
| GAGAAAAGAAAAGAAAGGTA+TGG | - | chr8_2:12652696-12652715 | Msa1234910:intron | 30.0% | |
| ! | CGGAAAGAGAAATTTTTAAC+TGG | + | chr8_2:12652723-12652742 | None:intergenic | 30.0% |
| ATTGAATCTTGAATTGTTGC+AGG | - | chr8_2:12652799-12652818 | Msa1234910:intron | 30.0% | |
| TTGAATCTTGAATTGTTGCA+GGG | - | chr8_2:12652800-12652819 | Msa1234910:intron | 30.0% | |
| TGATCGGAAGAATTATCTTT+AGG | + | chr8_2:12652891-12652910 | None:intergenic | 30.0% | |
| TAAGTTAAGGTCGAATTGAT+CGG | + | chr8_2:12652907-12652926 | None:intergenic | 30.0% | |
| !! | ATCAGTTTTATCACTGAGAT+TGG | - | chr8_2:12653117-12653136 | Msa1234910:intron | 30.0% |
| AGTATGAATAAGGACTAAGG+AGG | + | chr8_2:12649008-12649027 | None:intergenic | 35.0% | |
| ! | AGGAGTATGAATAAGGACTA+AGG | + | chr8_2:12649011-12649030 | None:intergenic | 35.0% |
| ! | TTAATTACCTTCATGGTGGA+AGG | + | chr8_2:12649043-12649062 | None:intergenic | 35.0% |
| TGGATGCAAAATAAACTTGG+TGG | - | chr8_2:12649196-12649215 | Msa1234910:three_prime_UTR | 35.0% | |
| GGATGCAAAATAAACTTGGT+GGG | - | chr8_2:12649197-12649216 | Msa1234910:three_prime_UTR | 35.0% | |
| CTTATTTCCATAAGCTCCTT+GGG | - | chr8_2:12649604-12649623 | Msa1234910:intron | 35.0% | |
| CCAATTGCTAGTAAACTATG+AGG | + | chr8_2:12649927-12649946 | None:intergenic | 35.0% | |
| CCTCATAGTTTACTAGCAAT+TGG | - | chr8_2:12649924-12649943 | Msa1234910:intron | 35.0% | |
| !! | GATCCTCTTGTTGTGTATTT+TGG | + | chr8_2:12649992-12650011 | None:intergenic | 35.0% |
| !! | ACTCTTGAAGAGTATCTCTA+AGG | + | chr8_2:12650373-12650392 | None:intergenic | 35.0% |
| TACTCTTCAAGAGTCAAGAA+TGG | - | chr8_2:12650379-12650398 | Msa1234910:intron | 35.0% | |
| !! | TCTTTTGAGTCAGTTCTTGA+AGG | - | chr8_2:12650776-12650795 | Msa1234910:intron | 35.0% |
| ATTCTACACCTGCTTTCTTT+GGG | - | chr8_2:12650817-12650836 | Msa1234910:intron | 35.0% | |
| TTTGGGAAAATGGAACCTAA+AGG | - | chr8_2:12650834-12650853 | Msa1234910:intron | 35.0% | |
| TCTAGACATCTAATGACAAG+TGG | + | chr8_2:12651475-12651494 | None:intergenic | 35.0% | |
| TTATAACAAAGTGGCGCAAT+TGG | - | chr8_2:12651500-12651519 | Msa1234910:intron | 35.0% | |
| ! | TAGCTTAGGTCGAAATGTTT+TGG | - | chr8_2:12651534-12651553 | Msa1234910:intron | 35.0% |
| TAAAATCGTGAATCAGTGAG+AGG | - | chr8_2:12651607-12651626 | Msa1234910:intron | 35.0% | |
| CTTCTAGTCTAAGGGAAATT+GGG | + | chr8_2:12651772-12651791 | None:intergenic | 35.0% | |
| TCTTCTAGTCTAAGGGAAAT+TGG | + | chr8_2:12651773-12651792 | None:intergenic | 35.0% | |
| !! | CGTTTTGATCTTCTAGTCTA+AGG | + | chr8_2:12651781-12651800 | None:intergenic | 35.0% |
| TTAGCTAAGGCCTAATTGTT+CGG | - | chr8_2:12651823-12651842 | Msa1234910:CDS | 35.0% | |
| GTAGTACTCGAGTTCAATAT+TGG | - | chr8_2:12651846-12651865 | Msa1234910:CDS | 35.0% | |
| TTTATTGTGAGGTTGAGATC+TGG | + | chr8_2:12652106-12652125 | None:intergenic | 35.0% | |
| CTAAACTCGTTGAACATCAA+TGG | - | chr8_2:12652156-12652175 | Msa1234910:CDS | 35.0% | |
| ! | ATCGTCAATTGTGGAGTTTT+AGG | + | chr8_2:12652292-12652311 | None:intergenic | 35.0% |
| ! | ATTTTCAGAGGCTAATTTGG+TGG | + | chr8_2:12652386-12652405 | None:intergenic | 35.0% |
| ! | TGGATTTTCAGAGGCTAATT+TGG | + | chr8_2:12652389-12652408 | None:intergenic | 35.0% |
| GTGTTTGTTTGAGGAATTTC+GGG | + | chr8_2:12652466-12652485 | None:intergenic | 35.0% | |
| ATTTACCTGAACATTTGGCT+TGG | + | chr8_2:12652516-12652535 | None:intergenic | 35.0% | |
| TTAAGAAGTGAAGCTCTTCT+TGG | + | chr8_2:12652669-12652688 | None:intergenic | 35.0% | |
| AGAGGACCCTATCAAATTAA+TGG | - | chr8_2:12652831-12652850 | Msa1234910:intron | 35.0% | |
| AAAAATGAGGGTAGTAGTTC+TGG | - | chr8_2:12652858-12652877 | Msa1234910:intron | 35.0% | |
| AATCTTCTTAGGGCATAGTT+AGG | + | chr8_2:12652991-12653010 | None:intergenic | 35.0% | |
| TCAATTAGGTCCAATGCTTT+CGG | - | chr8_2:12653078-12653097 | Msa1234910:intron | 35.0% | |
| !!! | TTGTTTTGATCCGAAAGCAT+TGG | + | chr8_2:12653091-12653110 | None:intergenic | 35.0% |
| GTCACTTGTAGTTCTTCAAC+TGG | - | chr8_2:12649176-12649195 | Msa1234910:three_prime_UTR | 40.0% | |
| GCTTATTTCCATAAGCTCCT+TGG | - | chr8_2:12649603-12649622 | Msa1234910:intron | 40.0% | |
| AAGTTATCCCAAGGAGCTTA+TGG | + | chr8_2:12649614-12649633 | None:intergenic | 40.0% | |
| CTAAATTCTTCTCTAGGCTC+TGG | + | chr8_2:12649897-12649916 | None:intergenic | 40.0% | |
| ATTTCTTCAGGAGTGAAGTC+TGG | + | chr8_2:12650035-12650054 | None:intergenic | 40.0% | |
| GACTTCACTCCTGAAGAAAT+TGG | - | chr8_2:12650035-12650054 | Msa1234910:intron | 40.0% | |
| TCTTAACTGTCCATCAAGCT+TGG | - | chr8_2:12650142-12650161 | Msa1234910:intron | 40.0% | |
| AATGCACTTTGCAGTGAATC+AGG | - | chr8_2:12650185-12650204 | Msa1234910:intron | 40.0% | |
| !! | TGAAGAGTATCTCTAAGGCT+AGG | + | chr8_2:12650368-12650387 | None:intergenic | 40.0% |
| TCAAGAGTCAAGAATGGAGA+AGG | - | chr8_2:12650385-12650404 | Msa1234910:intron | 40.0% | |
| TTGTCAATTCGGATGTGTTG+CGG | - | chr8_2:12650453-12650472 | Msa1234910:intron | 40.0% | |
| GATTCTACACCTGCTTTCTT+TGG | - | chr8_2:12650816-12650835 | Msa1234910:intron | 40.0% | |
| ! | ACCTGCTTTCTTTGGGAAAA+TGG | - | chr8_2:12650824-12650843 | Msa1234910:intron | 40.0% |
| ! | TCCATTTTCCCAAAGAAAGC+AGG | + | chr8_2:12650828-12650847 | None:intergenic | 40.0% |
| !!! | CTGATCGTGTTTTTTGGTTG+TGG | - | chr8_2:12651112-12651131 | Msa1234910:intron | 40.0% |
| CCAACATGCAAAACTCAGAT+GGG | - | chr8_2:12651166-12651185 | Msa1234910:intron | 40.0% | |
| CAACATGCAAAACTCAGATG+GGG | - | chr8_2:12651167-12651186 | Msa1234910:intron | 40.0% | |
| AACATGCAAAACTCAGATGG+GGG | - | chr8_2:12651168-12651187 | Msa1234910:intron | 40.0% | |
| ! | AAATTAGGTTAGTCATGGGC+TGG | - | chr8_2:12651397-12651416 | Msa1234910:CDS | 40.0% |
| AGACATCTAATGACAAGTGG+TGG | + | chr8_2:12651472-12651491 | None:intergenic | 40.0% | |
| GTAGTACTTGAGTTCGATCT+TGG | - | chr8_2:12651696-12651715 | Msa1234910:intron | 40.0% | |
| TACTTGAGTTCGATCTTGGT+TGG | - | chr8_2:12651700-12651719 | Msa1234910:intron | 40.0% | |
| AGTCTAAGGGAAATTGGGTT+CGG | + | chr8_2:12651767-12651786 | None:intergenic | 40.0% | |
| GAACAATTAGGCCTTAGCTA+AGG | + | chr8_2:12651824-12651843 | None:intergenic | 40.0% | |
| TAGCTAAGGCCTAATTGTTC+GGG | - | chr8_2:12651824-12651843 | Msa1234910:CDS | 40.0% | |
| !!! | GTGATCAATTTTGGTTGGGA+AGG | + | chr8_2:12652037-12652056 | None:intergenic | 40.0% |
| ACTCGTTGAACATCAATGGT+AGG | - | chr8_2:12652160-12652179 | Msa1234910:CDS | 40.0% | |
| ATGATCTCAGTTGCATTCGT+AGG | + | chr8_2:12652355-12652374 | None:intergenic | 40.0% | |
| TACGAATGCAACTGAGATCA+TGG | - | chr8_2:12652354-12652373 | Msa1234910:intron | 40.0% | |
| ! | TTAGCCTCTGAAAATCCAAG+CGG | - | chr8_2:12652391-12652410 | Msa1234910:intron | 40.0% |
| ! | TCTAAGGCAGTGTTTGTTTG+AGG | + | chr8_2:12652475-12652494 | None:intergenic | 40.0% |
| !! | TCCTTGTTCGGTTGTTTCTA+AGG | + | chr8_2:12652491-12652510 | None:intergenic | 40.0% |
| !! | TTTGGCTTGGTTTCCTTGTT+CGG | + | chr8_2:12652503-12652522 | None:intergenic | 40.0% |
| ATGCCCTAAGAAGATTGTTG+TGG | - | chr8_2:12652995-12653014 | Msa1234910:CDS | 40.0% | |
| AGGCCACAACAATCTTCTTA+GGG | + | chr8_2:12653001-12653020 | None:intergenic | 40.0% | |
| AAGGCCACAACAATCTTCTT+AGG | + | chr8_2:12653002-12653021 | None:intergenic | 40.0% | |
| ! | ATGGTGGAAGGACTAAGACT+AGG | + | chr8_2:12649031-12649050 | None:intergenic | 45.0% |
| TCTTAGTCCTTCCACCATGA+AGG | - | chr8_2:12649033-12649052 | Msa1234910:three_prime_UTR | 45.0% | |
| ! | GGTACTTCTTCTGAAGAGGA+TGG | + | chr8_2:12650014-12650033 | None:intergenic | 45.0% |
| ! | GTCTGGTACTTCTTCTGAAG+AGG | + | chr8_2:12650018-12650037 | None:intergenic | 45.0% |
| TAACTGTCCATCAAGCTTGG+AGG | - | chr8_2:12650145-12650164 | Msa1234910:intron | 45.0% | |
| CTATCAACCTCCAAGCTTGA+TGG | + | chr8_2:12650155-12650174 | None:intergenic | 45.0% | |
| ! | CATCAAGCTTGGAGGTTGAT+AGG | - | chr8_2:12650153-12650172 | Msa1234910:intron | 45.0% |
| ATCAGGTGGTGACAAAGATG+AGG | - | chr8_2:12650202-12650221 | Msa1234910:intron | 45.0% | |
| !! | GTATCTCTAAGGCTAGGTGT+TGG | + | chr8_2:12650362-12650381 | None:intergenic | 45.0% |
| AGTGGTTGTTGGATCGAGAT+TGG | + | chr8_2:12650603-12650622 | None:intergenic | 45.0% | |
| GCCAACATGCAAAACTCAGA+TGG | - | chr8_2:12651165-12651184 | Msa1234910:intron | 45.0% | |
| ! | CCCATCTGAGTTTTGCATGT+TGG | + | chr8_2:12651169-12651188 | None:intergenic | 45.0% |
| TGAATCTCTTCCTCAGCTTG+TGG | - | chr8_2:12651215-12651234 | Msa1234910:intron | 45.0% | |
| ! | CAAGGATTTTCCACAAGCTG+AGG | + | chr8_2:12651228-12651247 | None:intergenic | 45.0% |
| ! | TGGTTAATGCGCGTTAGCTT+AGG | - | chr8_2:12651520-12651539 | Msa1234910:intron | 45.0% |
| CGAGTACTACCCGAACAATT+AGG | + | chr8_2:12651836-12651855 | None:intergenic | 45.0% | |
| GTCGAGACTGAATTTCACTG+TGG | - | chr8_2:12651922-12651941 | Msa1234910:CDS | 45.0% | |
| TGCAACTGAGATCATGGAGT+TGG | - | chr8_2:12652360-12652379 | Msa1234910:intron | 45.0% | |
| ! | TTCACCGCTTGGATTTTCAG+AGG | + | chr8_2:12652398-12652417 | None:intergenic | 45.0% |
| GCCTTAGAAACAACCGAACA+AGG | - | chr8_2:12652487-12652506 | Msa1234910:intron | 45.0% | |
| GGAAACCAAGCCAAATGTTC+AGG | - | chr8_2:12652508-12652527 | Msa1234910:intron | 45.0% | |
| !!! | TATGAAATTTTAATTTTTTT+TGG | - | chr8_2:12650907-12650926 | Msa1234910:intron | 5.0% |
| GCACTTTGCAGTGAATCAGG+TGG | - | chr8_2:12650188-12650207 | Msa1234910:intron | 50.0% | |
| GTCAGCACATCAGTGGTTGT+TGG | + | chr8_2:12650614-12650633 | None:intergenic | 50.0% | |
| TTGGCAAGTCAGCACATCAG+TGG | + | chr8_2:12650621-12650640 | None:intergenic | 50.0% | |
| !! | TTGGTTCTGCGCCTTAGCTA+AGG | - | chr8_2:12651810-12651829 | Msa1234910:CDS | 50.0% |
| TGTTGCAGGGTCATTGCTAG+AGG | - | chr8_2:12652813-12652832 | Msa1234910:intron | 50.0% | |
| AGAAAACCCCCCAAGTGCAC+CGG | - | chr8_2:12652417-12652436 | Msa1234910:intron | 55.0% | |
| ACTAGTGACCGGTGCACTTG+GGG | + | chr8_2:12652428-12652447 | None:intergenic | 55.0% | |
| CACTAGTGACCGGTGCACTT+GGG | + | chr8_2:12652429-12652448 | None:intergenic | 55.0% | |
| TCACTAGTGACCGGTGCACT+TGG | + | chr8_2:12652430-12652449 | None:intergenic | 55.0% | |
| ! | GGGGGGTTTTCTTCACCGCT+TGG | + | chr8_2:12652409-12652428 | None:intergenic | 60.0% |
| TAGTGACCGGTGCACTTGGG+GGG | + | chr8_2:12652426-12652445 | None:intergenic | 60.0% | |
| CTAGTGACCGGTGCACTTGG+GGG | + | chr8_2:12652427-12652446 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 12649002 | 12653206 | 12649002 | ID=Msa1234910;Name=Msa1234910 |
| chr8_2 | mRNA | 12649002 | 12653206 | 12649002 | ID=Msa1234910-mRNA-1;Parent=Msa1234910;Name=Msa1234910-mRNA-1;_AED=0.13;_eAED=0.13;_QI=47|0.85|0.75|1|1|1|8|277|410 |
| chr8_2 | exon | 12649002 | 12649387 | 12649002 | ID=Msa1234910-mRNA-1:exon:4911;Parent=Msa1234910-mRNA-1 |
| chr8_2 | exon | 12649496 | 12649553 | 12649496 | ID=Msa1234910-mRNA-1:exon:4910;Parent=Msa1234910-mRNA-1 |
| chr8_2 | exon | 12649679 | 12649929 | 12649679 | ID=Msa1234910-mRNA-1:exon:4909;Parent=Msa1234910-mRNA-1 |
| chr8_2 | exon | 12650940 | 12651063 | 12650940 | ID=Msa1234910-mRNA-1:exon:4908;Parent=Msa1234910-mRNA-1 |
| chr8_2 | exon | 12651353 | 12651440 | 12651353 | ID=Msa1234910-mRNA-1:exon:4907;Parent=Msa1234910-mRNA-1 |
| chr8_2 | exon | 12651802 | 12652322 | 12651802 | ID=Msa1234910-mRNA-1:exon:4906;Parent=Msa1234910-mRNA-1 |
| chr8_2 | exon | 12652946 | 12653021 | 12652946 | ID=Msa1234910-mRNA-1:exon:4905;Parent=Msa1234910-mRNA-1 |
| chr8_2 | exon | 12653154 | 12653206 | 12653154 | ID=Msa1234910-mRNA-1:exon:4904;Parent=Msa1234910-mRNA-1 |
| chr8_2 | five_prime_UTR | 12653160 | 12653206 | 12653160 | ID=Msa1234910-mRNA-1:five_prime_utr;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12653154 | 12653159 | 12653154 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12652946 | 12653021 | 12652946 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12651802 | 12652322 | 12651802 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12651353 | 12651440 | 12651353 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12650940 | 12651063 | 12650940 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12649679 | 12649929 | 12649679 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12649496 | 12649553 | 12649496 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | CDS | 12649279 | 12649387 | 12649279 | ID=Msa1234910-mRNA-1:cds;Parent=Msa1234910-mRNA-1 |
| chr8_2 | three_prime_UTR | 12649002 | 12649278 | 12649002 | ID=Msa1234910-mRNA-1:three_prime_utr;Parent=Msa1234910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
