AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1090310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1090310 MtrunA17_Chr3g0119761 76.800 125 14 1 86 210 22 131 6.51e-59 181
Msa1090310 MtrunA17_Chr1g0211691 69.565 92 21 1 119 210 811 895 5.29e-33 125
Msa1090310 MtrunA17_Chr1g0211711 82.667 75 12 1 136 210 816 889 3.29e-32 122
Msa1090310 MtrunA17_Chr5g0420361 68.000 75 24 0 136 210 548 622 2.31e-26 105
Msa1090310 MtrunA17_Chr1g0183311 58.696 92 31 1 119 210 611 695 1.48e-24 100
Msa1090310 MtrunA17_Chr5g0426961 60.526 76 23 1 119 194 607 675 1.56e-18 83.6
Msa1090310 MtrunA17_Chr7g0231061 53.425 73 27 1 119 191 111 176 1.21e-15 72.4
Msa1090310 MtrunA17_Chr1g0211661 48.810 84 32 2 119 202 691 763 8.84e-15 72.4
Msa1090310 MtrunA17_Chr6g0472441 55.263 76 18 2 136 210 484 544 1.89e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 166 sgRNAs with CRISPR-Local

Find 940 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGAATTTACTTATTT+TGG 0.068037 7_3:+4198904 Msa1090310:three_prime_UTR
CGGTTTACATGTTTGAAAAT+TGG 0.165847 7_3:+4208743 Msa1090310:three_prime_UTR
TTTCTCGTCTGAAGAATTTA+TGG 0.180309 7_3:-4194428 None:intergenic
TGGGACACCTTGTATCTAAA+AGG 0.219415 7_3:+4207738 Msa1090310:three_prime_UTR
TAGGTTCTAAATTTGAAATT+TGG 0.240898 7_3:+4202682 Msa1090310:three_prime_UTR
TTCGGTAATTATAAAGTATT+AGG 0.259457 7_3:+4208832 Msa1090310:three_prime_UTR
GTTGGATTCAGATGATAAAT+AGG 0.265185 7_3:-4208544 None:intergenic
GTTAAGAGATCTTTCAAGTT+TGG 0.286201 7_3:+4207505 Msa1090310:three_prime_UTR
TCATAGACCATTGTAGTTTC+AGG 0.286390 7_3:-4198118 None:intergenic
AAGGAGGAATGAAGGGTAGT+AGG 0.293863 7_3:-4192703 None:intergenic
GAACTTCCTTGTTGCTGAAT+CGG 0.301153 7_3:-4202653 None:intergenic
AAATACATGACGATGGATAA+TGG 0.308787 7_3:+4202896 Msa1090310:three_prime_UTR
AACTTCCTTGTTGCTGAATC+GGG 0.309232 7_3:-4202652 None:intergenic
TACAATTCGCCAACTTTCAT+TGG 0.311032 7_3:+4207718 Msa1090310:three_prime_UTR
AACCGAATACAAAACTAAAT+AGG 0.312099 7_3:-4208953 None:intergenic
GAATCTCAAAAGGGTGTAAT+AGG 0.312682 7_3:+4198707 Msa1090310:three_prime_UTR
GTGTGTGGCTTCATCTAAAA+TGG 0.314843 7_3:+4203016 Msa1090310:three_prime_UTR
AACTTTATCTGCGACTGTTT+TGG 0.316634 7_3:+4207673 Msa1090310:three_prime_UTR
AACAATTGAAGCGCTAAATC+TGG 0.325658 7_3:+4192810 Msa1090310:CDS
GTAAAACCAATTGAATGTTC+TGG 0.344357 7_3:-4192647 None:intergenic
TTACCGAATTTAAAACAAAT+AGG 0.351274 7_3:-4208817 None:intergenic
AACCGTGAGTGTAACTAAAT+AGG 0.356359 7_3:-4207863 None:intergenic
AAAATAAATAATCATGTTGC+TGG 0.356483 7_3:+4192609 None:intergenic
ATGGTTCCAAGCGTGACATT+AGG 0.359515 7_3:+4202858 Msa1090310:three_prime_UTR
TCTCCAAAATAAGTAAATTC+TGG 0.362321 7_3:-4198907 None:intergenic
TGGTTCCAAGCGTGACATTA+GGG 0.364051 7_3:+4202859 Msa1090310:three_prime_UTR
AGGAGGAATGAAGGGTAGTA+GGG 0.367757 7_3:-4192702 None:intergenic
AATACATGACGATGGATAAT+GGG 0.374168 7_3:+4202897 Msa1090310:three_prime_UTR
AGCGCTAAATCTGGGTGATT+TGG 0.376838 7_3:+4192819 Msa1090310:CDS
TCAAAACTAGATCCTTCAAC+AGG 0.378708 7_3:-4203047 None:intergenic
GAAGCATTTCAGAAGAGTTC+AGG 0.380408 7_3:+4194464 Msa1090310:three_prime_UTR
TTTCAAGCAGAAGAATGTTC+TGG 0.381610 7_3:+4202759 Msa1090310:three_prime_UTR
GCATTGTCTTCCTACATTGT+TGG 0.387969 7_3:-4208562 None:intergenic
AATAAGAGAAGGAGGAATGA+AGG 0.394155 7_3:-4192711 None:intergenic
TAGGAAGACAATGCATCAAA+TGG 0.400920 7_3:+4208571 Msa1090310:three_prime_UTR
ATACAAAGCTTCTTTATTGA+CGG 0.409686 7_3:+4208600 Msa1090310:three_prime_UTR
TTCAATATGCAGTCTTATCA+AGG 0.421472 7_3:+4208631 Msa1090310:three_prime_UTR
GATTCTCCAGAACATTCAAT+TGG 0.425553 7_3:+4192641 Msa1090310:CDS
GGTGCTACATGGTGATAATC+AGG 0.426928 7_3:+4194363 Msa1090310:CDS
CACCTTGAAACCGCGATCCT+TGG 0.431343 7_3:-4202719 None:intergenic
AAATATTATGTTATGCATCA+AGG 0.435058 7_3:-4208791 None:intergenic
ATCTCAGCGCGCAAGGTCCT+AGG 0.435679 7_3:+4193085 Msa1090310:CDS
CTATGAAACTTGTTGTTGAA+TGG 0.436799 7_3:+4198135 Msa1090310:three_prime_UTR
TTGTGTGCAGGAATCTCAAA+AGG 0.437894 7_3:+4198697 Msa1090310:intron
AAGAGAGTCACTAAAATTCA+AGG 0.442926 7_3:-4208387 None:intergenic
ATCATACAAAAGCAAATTCA+AGG 0.445622 7_3:+4207936 Msa1090310:three_prime_UTR
TGAAAATTGGAAGTTTGAAC+TGG 0.447963 7_3:+4208756 Msa1090310:three_prime_UTR
GAAAGTTCTACAAGGCAACT+TGG 0.449663 7_3:+4202784 Msa1090310:three_prime_UTR
AAAGAATAATCAGCCACAAT+TGG 0.453496 7_3:+4203104 Msa1090310:three_prime_UTR
TGGGGATAACATTGGTCAAA+AGG 0.454960 7_3:+4202804 Msa1090310:three_prime_UTR
ACATTCTTCTGCTTGAAACT+AGG 0.456561 7_3:-4202754 None:intergenic
AAAGTTCTACAAGGCAACTT+GGG 0.465977 7_3:+4202785 Msa1090310:three_prime_UTR
TATGTAGATCATGTTCAGTT+AGG 0.466456 7_3:-4203284 None:intergenic
TTCACCGTACAAACAATTCA+AGG 0.468525 7_3:+4193041 Msa1090310:CDS
ACAATTCGCCAACTTTCATT+GGG 0.468607 7_3:+4207719 Msa1090310:three_prime_UTR
AAACTTGACACTGATGCATC+TGG 0.469022 7_3:-4203255 None:intergenic
AAAACTATTATAGAGGTGGT+TGG 0.473044 7_3:+4202540 Msa1090310:three_prime_UTR
AACTGAACTTGACTTTGCAT+TGG 0.476913 7_3:-4202954 None:intergenic
CAATTGGTGAATGCTTCAAC+AGG 0.476955 7_3:+4203120 Msa1090310:three_prime_UTR
AGAGACAGCTAAGTTGCCTC+AGG 0.477807 7_3:+4203437 Msa1090310:three_prime_UTR
TTGAAATTTGGAGATTATGC+TGG 0.486444 7_3:+4202694 Msa1090310:three_prime_UTR
TGCAAGAACTCGGCTACGGC+GGG 0.488925 7_3:+4193111 Msa1090310:CDS
CACGGTTATAGTCACATAAG+AGG 0.495209 7_3:+4207879 Msa1090310:three_prime_UTR
CCTGGATTAAAACAACCATC+AGG 0.495537 7_3:+4202993 Msa1090310:three_prime_UTR
TGCCAAGGATCGCGGTTTCA+AGG 0.495555 7_3:+4202717 Msa1090310:three_prime_UTR
ACATAAGAGGAAGCAAGAGC+TGG 0.497961 7_3:+4207892 Msa1090310:three_prime_UTR
TGCAGAGATAAGTTGTCAAT+CGG 0.499359 7_3:+4203383 Msa1090310:three_prime_UTR
TGTCTTACATGTGGCAATGT+AGG 0.503754 7_3:+4203594 Msa1090310:three_prime_UTR
TAGCATCAAACCTTATTCAA+TGG 0.504256 7_3:-4207977 None:intergenic
AAGATGCTAATTAGCTACTA+AGG 0.505530 7_3:-4198735 None:intergenic
AACAGTCGTGCACAGGATGA+TGG 0.506773 7_3:+4202839 Msa1090310:three_prime_UTR
TAATGCCGTTGAATGATGAT+AGG 0.510919 7_3:+4202568 Msa1090310:three_prime_UTR
ATGGCATCAATCCCTGTTGA+AGG 0.511007 7_3:+4203035 Msa1090310:three_prime_UTR
ATAAGAGAAGGAGGAATGAA+GGG 0.513042 7_3:-4192710 None:intergenic
TCAAATTTAGAACCTACAGC+TGG 0.513724 7_3:-4202675 None:intergenic
GCAAGAGCATCAATCTCCAC+TGG 0.514196 7_3:-4203336 None:intergenic
ATCATGTTGCTGGGTACTCT+CGG 0.518619 7_3:+4192619 None:intergenic
TTGTCAATCGGAAGTGGAGA+TGG 0.519404 7_3:+4203395 Msa1090310:three_prime_UTR
AATTGAGAAATAAGAGAAGG+AGG 0.522594 7_3:-4192719 None:intergenic
GATAAGTTGTCAATCGGAAG+TGG 0.524889 7_3:+4203389 Msa1090310:three_prime_UTR
GGCTCCCCTAATGTCACGCT+TGG 0.526509 7_3:-4202864 None:intergenic
GGGACACCTTGTATCTAAAA+GGG 0.527015 7_3:+4207739 Msa1090310:three_prime_UTR
AGGAAGACAATGCATCAAAT+GGG 0.527537 7_3:+4208572 Msa1090310:three_prime_UTR
AATATTATGTTATGCATCAA+GGG 0.534580 7_3:-4208790 None:intergenic
GCACCCTCTTGTCTTGCTCA+AGG 0.536107 7_3:-4194345 None:intergenic
TCTAATATGACAGACCCTGC+TGG 0.537237 7_3:+4203144 Msa1090310:three_prime_UTR
ACAATTGAAGCGCTAAATCT+GGG 0.537239 7_3:+4192811 Msa1090310:CDS
GTAAAGCTTGTGCACTGCAT+AGG 0.540182 7_3:+4203649 Msa1090310:three_prime_UTR
TCCTAGGGTTTGCAAGAACT+CGG 0.540523 7_3:+4193101 Msa1090310:CDS
GAAAATTGAGAAATAAGAGA+AGG 0.541773 7_3:-4192722 None:intergenic
TCATCTGAATCCAACAATGT+AGG 0.544444 7_3:+4208552 Msa1090310:three_prime_UTR
GATTACCACTTACAAAATCA+AGG 0.544502 7_3:+4198928 Msa1090310:three_prime_UTR
GGCAATTCGATGATTTCAGT+CGG 0.548679 7_3:+4202589 Msa1090310:three_prime_UTR
TTTCAAAACTATTATAGAGG+TGG 0.551598 7_3:+4202536 Msa1090310:three_prime_UTR
AGCTCAACCATGGAGTTTAG+CGG 0.551609 7_3:+4197510 Msa1090310:three_prime_UTR
GCAATTCGATGATTTCAGTC+GGG 0.552297 7_3:+4202590 Msa1090310:three_prime_UTR
TTAGTCATATTAGAACCAGC+AGG 0.552780 7_3:-4203159 None:intergenic
CAAGGTGTCCCAATGAAAGT+TGG 0.554413 7_3:-4207727 None:intergenic
TTGATGCTCAGAAAGTCATA+AGG 0.558480 7_3:-4198090 None:intergenic
TCTCAGCGCGCAAGGTCCTA+GGG 0.559527 7_3:+4193086 Msa1090310:CDS
AAAGTGAGCTTACATGATGA+AGG 0.561482 7_3:-4197544 None:intergenic
AAGAAAATACTTTGCTGCAG+AGG 0.562763 7_3:-4208515 None:intergenic
GTTGAAGCATTCACCAATTG+TGG 0.562816 7_3:-4203117 None:intergenic
GTCACTTTCAAGCTCAACCA+TGG 0.563416 7_3:+4197500 Msa1090310:three_prime_UTR
GAAGTGAAATTGAACTCTGA+TGG 0.566558 7_3:+4194289 Msa1090310:CDS
TGAACATGAAGTGTGAGAGA+TGG 0.569037 7_3:-4192772 None:intergenic
CGTCATGTATTTATCTCATG+TGG 0.570168 7_3:-4202885 None:intergenic
TATGTATAACAGTCGTGCAC+AGG 0.572185 7_3:+4202832 Msa1090310:three_prime_UTR
AAATAAATAATCATGTTGCT+GGG 0.572702 7_3:+4192610 None:intergenic
TTCCTATTTAGTTACACTCA+CGG 0.574912 7_3:+4207861 Msa1090310:three_prime_UTR
TTGAATCAGATAACAAACCT+TGG 0.575230 7_3:+4198770 Msa1090310:three_prime_UTR
CAAGACAAGAGGGTGCTACA+TGG 0.575858 7_3:+4194352 Msa1090310:CDS
CCACTGCTCTCCTTTAAAGC+AGG 0.579600 7_3:+4194492 Msa1090310:three_prime_UTR
ACTGGAGCTTCCGATACTTG+AGG 0.579857 7_3:-4203318 None:intergenic
ACTTCCTTGTTGCTGAATCG+GGG 0.580257 7_3:-4202651 None:intergenic
TGGAGATTATGCTGGTGCCA+AGG 0.580644 7_3:+4202702 Msa1090310:three_prime_UTR
TGAAGTTGAACCTCAAGTAT+CGG 0.581112 7_3:+4203308 Msa1090310:three_prime_UTR
TTGACCTTGAATTGTTTGTA+CGG 0.583693 7_3:-4193045 None:intergenic
AGATCTGCCGCTAAACTCCA+TGG 0.584643 7_3:-4197517 None:intergenic
TTGCAAGAACTCGGCTACGG+CGG 0.586253 7_3:+4193110 Msa1090310:CDS
CAACTTAGCTGTCTCTGACT+CGG 0.587029 7_3:-4203430 None:intergenic
CTATTTCTAACTGATTCGAA+TGG 0.587342 7_3:+4198178 Msa1090310:three_prime_UTR
GCACCTTGAGCAAGACAAGA+GGG 0.592480 7_3:+4194342 Msa1090310:CDS
TTGGTAGAATTGAGTTTGGG+AGG 0.595529 7_3:+4192974 Msa1090310:intron
TCAAGTATCGGAAGCTCCAG+TGG 0.598462 7_3:+4203320 Msa1090310:three_prime_UTR
TCTTGAAATCTCAGCGCGCA+AGG 0.599323 7_3:+4193078 Msa1090310:CDS
CACTGATGCATCTGGCGGTG+CGG 0.604862 7_3:-4203247 None:intergenic
TTTGAAGCGCTAGACTCGCT+CGG 0.606775 7_3:-4193015 None:intergenic
AGCTCCCCGATTCAGCAACA+AGG 0.608377 7_3:+4202647 Msa1090310:three_prime_UTR
AAAACAACCATCAGGGTGTG+TGG 0.612294 7_3:+4203001 Msa1090310:three_prime_UTR
CAAAACTAGATCCTTCAACA+GGG 0.613617 7_3:-4203046 None:intergenic
CCTGCTTTAAAGGAGAGCAG+TGG 0.616732 7_3:-4194492 None:intergenic
TTCTGGCTGAAAGTTCTACA+AGG 0.619073 7_3:+4202776 Msa1090310:three_prime_UTR
CCAAAATAAGTAAATTCTGG+AGG 0.619991 7_3:-4198904 None:intergenic
TATGCTGGTGCCAAGGATCG+CGG 0.620538 7_3:+4202709 Msa1090310:three_prime_UTR
GATGAAGCCACACACCCTGA+TGG 0.621745 7_3:-4203008 None:intergenic
TGTAGGCTTTGAAGAGACGT+TGG 0.625863 7_3:+4203611 Msa1090310:three_prime_UTR
TCAATTTCTTAATGGCAGCA+AGG 0.626798 7_3:-4194312 None:intergenic
TTAAATCTAGTCCAAAGACC+TGG 0.626898 7_3:+4202975 Msa1090310:three_prime_UTR
CTACATGGTGATAATCAGGA+TGG 0.630222 7_3:+4194367 Msa1090310:CDS
AGCACCTTGAGCAAGACAAG+AGG 0.633713 7_3:+4194341 Msa1090310:CDS
GCCGAGTTCTTGCAAACCCT+AGG 0.636535 7_3:-4193102 None:intergenic
TGTGTGCAGGAATCTCAAAA+GGG 0.637356 7_3:+4198698 Msa1090310:intron
ATACATGACGATGGATAATG+GGG 0.639350 7_3:+4202898 Msa1090310:three_prime_UTR
GGTTTGCAAGAACTCGGCTA+CGG 0.640660 7_3:+4193107 Msa1090310:CDS
AATTGCCTATCATCATTCAA+CGG 0.641039 7_3:-4202573 None:intergenic
ATGAGATAAATACATGACGA+TGG 0.642316 7_3:+4202889 Msa1090310:three_prime_UTR
AAGTTCTACAAGGCAACTTG+GGG 0.642391 7_3:+4202786 Msa1090310:three_prime_UTR
AACGTTGCCTGAAACTACAA+TGG 0.642558 7_3:+4198111 Msa1090310:three_prime_UTR
TCTGGCGGTGCGGATGCAAG+TGG 0.645216 7_3:-4203237 None:intergenic
TCGGGAACCATTGAACTACA+AGG 0.645879 7_3:+4202608 Msa1090310:three_prime_UTR
AACAAGGAAGTTCCAGCTGT+AGG 0.646193 7_3:+4202663 Msa1090310:three_prime_UTR
CTTGAAATCATGAAAACATG+AGG 0.646444 7_3:+4202931 Msa1090310:three_prime_UTR
GGAGATTGATGCTCTTGCAG+AGG 0.647925 7_3:+4203341 Msa1090310:three_prime_UTR
TAGTCATATTAGAACCAGCA+GGG 0.651331 7_3:-4203158 None:intergenic
AGGCAACTTGGGGATAACAT+TGG 0.652222 7_3:+4202796 Msa1090310:three_prime_UTR
TACTGCATCAGACATATCAC+AGG 0.653286 7_3:-4193810 None:intergenic
GGTTCCAAGCGTGACATTAG+GGG 0.666584 7_3:+4202860 Msa1090310:three_prime_UTR
ATACATGTCTGTCTTACATG+TGG 0.668449 7_3:+4203585 Msa1090310:three_prime_UTR
ATCTGATTCAAGCTGCAGAG+TGG 0.677129 7_3:-4198758 None:intergenic
CTGGATTAAAACAACCATCA+GGG 0.680238 7_3:+4202994 Msa1090310:three_prime_UTR
ATTATCAAGCATGTCAACAG+TGG 0.685664 7_3:-4194395 None:intergenic
CTTGACACTGATGCATCTGG+CGG 0.686581 7_3:-4203252 None:intergenic
TATGCATCAAGGGACATCGA+CGG 0.697608 7_3:-4208780 None:intergenic
CAAGGATCGCGGTTTCAAGG+TGG 0.714835 7_3:+4202720 Msa1090310:three_prime_UTR
AGCACATTATGTTCACACCG+AGG 0.784095 7_3:-4208323 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAAGAATGTTT+AGG + chr7_3:4195534-4195553 Msa1090310:intron 10.0%
!!! CATTTTAATTACAATAAATA+TGG + chr7_3:4196359-4196378 Msa1090310:intron 10.0%
!!! AGAAAAGTATATTAATTTTT+GGG + chr7_3:4196555-4196574 Msa1090310:intron 10.0%
!!! GTTAAAAGTATATTAATTTT+TGG + chr7_3:4196577-4196596 Msa1090310:intron 10.0%
!!! AAATATCAAATAATAGATTT+TGG + chr7_3:4197652-4197671 Msa1090310:intron 10.0%
!! AAAAAAAATAAAGTTTGATA+TGG + chr7_3:4197915-4197934 Msa1090310:intron 10.0%
!!! CTGTTTTTTTTTTTTTTTTT+TGG + chr7_3:4198487-4198506 Msa1090310:intron 10.0%
!! TTTAAATTCTATTATCAATA+GGG - chr7_3:4200389-4200408 None:intergenic 10.0%
!!! TTATTTTAAATTTTGTTCTT+TGG + chr7_3:4200825-4200844 Msa1090310:intron 10.0%
!! AAATTATGAATATTTCAAAA+CGG - chr7_3:4202078-4202097 None:intergenic 10.0%
!!! TAACAATTTTATAATAAACT+AGG - chr7_3:4207019-4207038 None:intergenic 10.0%
!!! TTATGAATGATATTTTTTAA+TGG + chr7_3:4208262-4208281 Msa1090310:intron 10.0%
!! ATTAGTTGAATCATTATATA+AGG + chr7_3:4194041-4194060 Msa1090310:intron 15.0%
!! GAAAGATTAAATAAAATAGT+TGG - chr7_3:4196485-4196504 None:intergenic 15.0%
!!! CAGAAAAGTATATTAATTTT+TGG + chr7_3:4196554-4196573 Msa1090310:intron 15.0%
!!! ATTTTATCTCCTTAAAAAAA+TGG + chr7_3:4196750-4196769 Msa1090310:intron 15.0%
!! TAAAATTAAACGAGAAAAAA+TGG - chr7_3:4196815-4196834 None:intergenic 15.0%
!! TACATATCATAAACAAATAT+TGG - chr7_3:4197739-4197758 None:intergenic 15.0%
!!! TCTTTATGAAGAATTTTTTT+TGG + chr7_3:4197796-4197815 Msa1090310:intron 15.0%
!!! AATGTATTATGAACATTTTT+AGG + chr7_3:4198048-4198067 Msa1090310:intron 15.0%
!! ATATTGGATTATAAAATCAA+AGG + chr7_3:4198593-4198612 Msa1090310:intron 15.0%
!!! AAAAGTGAATTTTAAGTTAT+AGG - chr7_3:4198663-4198682 None:intergenic 15.0%
!! AATAATTCTAATCGAAATAA+TGG + chr7_3:4199241-4199260 Msa1090310:intron 15.0%
!! AATTGAAATACATGTTTATT+AGG - chr7_3:4199302-4199321 None:intergenic 15.0%
!! ACCTTCAATAAAATAAAATA+AGG + chr7_3:4199490-4199509 Msa1090310:intron 15.0%
!!! TCCTTATTTTATTTTATTGA+AGG - chr7_3:4199494-4199513 None:intergenic 15.0%
!!! CACTTAATTTTTTTGATAAT+TGG + chr7_3:4199514-4199533 Msa1090310:intron 15.0%
!!! CTTTTTAACATATCATTTTA+TGG - chr7_3:4200097-4200116 None:intergenic 15.0%
!! GTTTAAATTCTATTATCAAT+AGG - chr7_3:4200390-4200409 None:intergenic 15.0%
!!! TCTAAAATTTTCTTATATGT+TGG + chr7_3:4201498-4201517 Msa1090310:intron 15.0%
!! TGATATTAAAGGTTAAATAT+AGG + chr7_3:4202023-4202042 Msa1090310:intron 15.0%
!! GATATTAAAGGTTAAATATA+GGG + chr7_3:4202024-4202043 Msa1090310:intron 15.0%
!!! TACTAATTTTGTTGTTATTT+TGG + chr7_3:4202142-4202161 Msa1090310:intron 15.0%
!!! ACTAATTTTGTTGTTATTTT+GGG + chr7_3:4202143-4202162 Msa1090310:intron 15.0%
!! GGTATATATAATTATTCTAA+TGG + chr7_3:4202327-4202346 Msa1090310:intron 15.0%
!!! TGTATCATTTTAATATTCTT+TGG - chr7_3:4203782-4203801 None:intergenic 15.0%
!! ATCTTATATATTAGTTAAGA+TGG + chr7_3:4203877-4203896 Msa1090310:intron 15.0%
!! TTACCAAATTTAAAAGAAAT+TGG - chr7_3:4206483-4206502 None:intergenic 15.0%
!! TTTAAATTTGGTAAATAGAA+AGG + chr7_3:4204946-4204965 Msa1090310:intron 15.0%
!! AAATATCATATTTCACATAA+AGG - chr7_3:4206741-4206760 None:intergenic 15.0%
!!! AACCTATTTTGTTTTAAATT+TGG + chr7_3:4206762-4206781 Msa1090310:intron 15.0%
!!! TACCAAATTTAAAACAAAAT+AGG - chr7_3:4206767-4206786 None:intergenic 15.0%
!!! AAATGCTAAAATTTCATTTT+CGG - chr7_3:4206844-4206863 None:intergenic 15.0%
!!! AAATGAAATTTTAGCATTTA+TGG + chr7_3:4206845-4206864 Msa1090310:intron 15.0%
!! ATAGTTAGAAATTTGATAAA+TGG + chr7_3:4207193-4207212 Msa1090310:intron 15.0%
!! TAGTTAGAAATTTGATAAAT+GGG + chr7_3:4207194-4207213 Msa1090310:intron 15.0%
!!! TTCAAAGTACTTTTAAATTT+GGG - chr7_3:4208086-4208105 None:intergenic 15.0%
!!! ATTCAAAGTACTTTTAAATT+TGG - chr7_3:4208087-4208106 None:intergenic 15.0%
!!! GTTTAAAATTTTGAATAAGT+AGG + chr7_3:4208205-4208224 Msa1090310:intron 15.0%
!!! TTATTGATGATAGTTGTTAA+GGG + chr7_3:4192868-4192887 Msa1090310:intron 20.0%
!! AAAACGGAATAAAATGAATT+CGG + chr7_3:4192893-4192912 Msa1090310:intron 20.0%
!! AAGATTCAAAATCATAGAAT+GGG - chr7_3:4193211-4193230 None:intergenic 20.0%
!! CAAAATCAGAATTGATAAAA+AGG - chr7_3:4193312-4193331 None:intergenic 20.0%
!!! TTTATCAATTCTGATTTTGT+TGG + chr7_3:4193313-4193332 Msa1090310:intron 20.0%
!!! TTATCAATTCTGATTTTGTT+GGG + chr7_3:4193314-4193333 Msa1090310:intron 20.0%
!!! GTTATATGTAATTGTGTTTT+TGG + chr7_3:4193351-4193370 Msa1090310:intron 20.0%
!!! AAACTTGTTTCTTTTGTAAT+TGG + chr7_3:4194234-4194253 Msa1090310:intron 20.0%
!!! CTTTTGTATCAATTTCTTAA+TGG - chr7_3:4194323-4194342 None:intergenic 20.0%
!! GAACCAAACAAAAAAATTAA+TGG - chr7_3:4194575-4194594 None:intergenic 20.0%
!! TTCAAATAAATGATAGACAA+AGG - chr7_3:4194661-4194680 None:intergenic 20.0%
!! CTATCATTTATTTGAATCAT+AGG + chr7_3:4194665-4194684 Msa1090310:intron 20.0%
!!! GTATTTTGGAGTTTTTATAT+GGG - chr7_3:4195830-4195849 None:intergenic 20.0%
!! CTTGAATGATAAAATAACAT+TGG - chr7_3:4195877-4195896 None:intergenic 20.0%
!!! TTACACATTTTATCAAGATT+GGG + chr7_3:4196129-4196148 Msa1090310:intron 20.0%
!!! AAAGTATATTAATTTTTGGG+AGG + chr7_3:4196558-4196577 Msa1090310:intron 20.0%
!! TGTACATTTAAATTAACTCT+TGG + chr7_3:4196609-4196628 Msa1090310:intron 20.0%
!! ACTATTCATTCATCTTAATA+CGG - chr7_3:4196674-4196693 None:intergenic 20.0%
!! AATAACGTTGTTATAAAACT+GGG + chr7_3:4197257-4197276 Msa1090310:intron 20.0%
!!! ATATCTTGAAGAATTTGTTT+TGG + chr7_3:4197758-4197777 Msa1090310:intron 20.0%
!! TGGTTTACTTAATTATGATT+TGG + chr7_3:4198223-4198242 Msa1090310:intron 20.0%
!! CTTTCTTAAGTTTATTCTAA+AGG - chr7_3:4198546-4198565 None:intergenic 20.0%
!!! TAGTAATTTTTTTACTCACA+TGG + chr7_3:4198627-4198646 Msa1090310:intron 20.0%
!! GCAAAATAGAGAATAAAATT+TGG + chr7_3:4198804-4198823 Msa1090310:intron 20.0%
!!! TTTTAATGAATAGCCAATAA+TGG - chr7_3:4199412-4199431 None:intergenic 20.0%
!! TCTTATGAATTGAAAAAGTT+AGG + chr7_3:4199939-4199958 Msa1090310:intron 20.0%
!! TTTATAACATCTTAATGAAG+AGG - chr7_3:4199979-4199998 None:intergenic 20.0%
!! ACACAAATCTAAATTGATAT+AGG + chr7_3:4200508-4200527 Msa1090310:intron 20.0%
!! GAACTTTGATATTAAATGAA+AGG - chr7_3:4200606-4200625 None:intergenic 20.0%
!! TGGATATTGAAATATAGATA+GGG - chr7_3:4201065-4201084 None:intergenic 20.0%
!! ATGGATATTGAAATATAGAT+AGG - chr7_3:4201066-4201085 None:intergenic 20.0%
!! TATCTATATTTCAATATCCA+TGG + chr7_3:4201065-4201084 Msa1090310:intron 20.0%
!!! TTGATTTTGTAAAATTGCTT+TGG + chr7_3:4201251-4201270 Msa1090310:intron 20.0%
!! TTTCTTATAAGTAATTCTCT+CGG + chr7_3:4201544-4201563 Msa1090310:intron 20.0%
!!! ACCTTTTTGAAATATTCATA+GGG + chr7_3:4201993-4202012 Msa1090310:intron 20.0%
!! TTTAACCTTTAATATCAATC+AGG - chr7_3:4202020-4202039 None:intergenic 20.0%
!!! CTAATTTTGTTGTTATTTTG+GGG + chr7_3:4202144-4202163 Msa1090310:intron 20.0%
!!! GATTTTCAAAACTATTATAG+AGG + chr7_3:4202533-4202552 Msa1090310:three_prime_UTR 20.0%
!!! TAGGTTCTAAATTTGAAATT+TGG + chr7_3:4202682-4202701 Msa1090310:three_prime_UTR 20.0%
!! TTAATTCAGTGATTCATAAA+AGG - chr7_3:4203549-4203568 None:intergenic 20.0%
!! TTTGTAGAACAAATTAAGAT+GGG - chr7_3:4203846-4203865 None:intergenic 20.0%
!! TATATATTAGTTAAGATGGA+TGG + chr7_3:4203881-4203900 Msa1090310:intron 20.0%
!!! AATTTAAAAGCATGTACATA+TGG - chr7_3:4203969-4203988 None:intergenic 20.0%
!!! ACATGCTTTTAAATTTCTAT+TGG + chr7_3:4203974-4203993 Msa1090310:intron 20.0%
!!! AACCTATTTGATTTTGTATT+CGG + chr7_3:4204214-4204233 Msa1090310:intron 20.0%
!!! AAATGAGATTTTAGTCTATA+TGG + chr7_3:4204419-4204438 Msa1090310:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4204501-4204520 Msa1090310:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4204501-4204520 Msa1090310:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG - chr7_3:4204859-4204878 None:intergenic 20.0%
!! AATATTATGTTACGCAATAA+AGG - chr7_3:4204912-4204931 None:intergenic 20.0%
!!! AACCAATTTCGTTTTAAATT+TGG + chr7_3:4204934-4204953 Msa1090310:intron 20.0%
!!! TACCAAATTTAAAACGAAAT+TGG - chr7_3:4204939-4204958 None:intergenic 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4204501-4204520 Msa1090310:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4204501-4204520 Msa1090310:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG - chr7_3:4204859-4204878 None:intergenic 20.0%
!! AATATTATGTTACGCAATAA+AGG - chr7_3:4204912-4204931 None:intergenic 20.0%
!!! AACCAATTTCGTTTTAAATT+TGG + chr7_3:4204934-4204953 Msa1090310:intron 20.0%
!!! TACCAAATTTAAAACGAAAT+TGG - chr7_3:4204939-4204958 None:intergenic 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4204501-4204520 Msa1090310:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4204501-4204520 Msa1090310:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG - chr7_3:4204859-4204878 None:intergenic 20.0%
!!! GAACCAATTTCTTTTAAATT+TGG + chr7_3:4206477-4206496 Msa1090310:intron 20.0%
!!! TACATGTTTGTTAAATATGA+AGG + chr7_3:4205015-4205034 Msa1090310:intron 20.0%
!!! AATGCTAAAATTTCATTTTC+GGG - chr7_3:4206843-4206862 None:intergenic 20.0%
!! TACAAAAATGATAAATGAGA+AGG + chr7_3:4206869-4206888 Msa1090310:intron 20.0%
!!! AGACGTTTTAAACTATTAAT+TGG + chr7_3:4207100-4207119 Msa1090310:intron 20.0%
!! AGCATAGTTAATTCTAAATT+CGG + chr7_3:4207255-4207274 Msa1090310:intron 20.0%
!! TAATTCTAAATTCGGTAAAT+TGG + chr7_3:4207263-4207282 Msa1090310:intron 20.0%
!!! TGGTTTTAAATTCAGTAAAT+TGG + chr7_3:4207381-4207400 Msa1090310:intron 20.0%
!! AAAAACAAAAATCTTGAGAT+CGG - chr7_3:4208018-4208037 None:intergenic 20.0%
!!! TCATGTTATTTATCTACTTT+GGG + chr7_3:4208122-4208141 Msa1090310:intron 20.0%
!!! TCAAAATTTTAAACGTATTC+AGG - chr7_3:4208199-4208218 None:intergenic 20.0%
!! TGATGTTCAAATTTCAAAAA+AGG - chr7_3:4208442-4208461 None:intergenic 20.0%
!! TAGTAAGTTGTGTAAAAAAT+GGG + chr7_3:4208485-4208504 Msa1090310:three_prime_UTR 20.0%
!!! AAACTAAAATCTCATTTTCT+CGG - chr7_3:4208719-4208738 None:intergenic 20.0%
!!! AATGAGATTTTAGTTTATCT+CGG + chr7_3:4208723-4208742 Msa1090310:three_prime_UTR 20.0%
!! AATATTATGTTATGCATCAA+GGG - chr7_3:4208793-4208812 None:intergenic 20.0%
!! AAATATTATGTTATGCATCA+AGG - chr7_3:4208794-4208813 None:intergenic 20.0%
!!! GAACCTATTTGTTTTAAATT+CGG + chr7_3:4208814-4208833 Msa1090310:three_prime_UTR 20.0%
!!! TTACCGAATTTAAAACAAAT+AGG - chr7_3:4208820-4208839 None:intergenic 20.0%
!!! TTCGGTAATTATAAAGTATT+AGG + chr7_3:4208832-4208851 Msa1090310:three_prime_UTR 20.0%
!!! ATGGTTACAAGTTTTATAAA+TGG + chr7_3:4208890-4208909 Msa1090310:three_prime_UTR 20.0%
!!! TACAAGTTTTATAAATGGAA+AGG + chr7_3:4208895-4208914 Msa1090310:three_prime_UTR 20.0%
!!! AACCTATTTAGTTTTGTATT+CGG + chr7_3:4208951-4208970 Msa1090310:three_prime_UTR 20.0%
!!! AAGAGTTTTTAGATTGTAGA+AGG - chr7_3:4192680-4192699 None:intergenic 25.0%
! GAAAATTGAGAAATAAGAGA+AGG - chr7_3:4192725-4192744 None:intergenic 25.0%
!! GTTATTGATGATAGTTGTTA+AGG + chr7_3:4192867-4192886 Msa1090310:intron 25.0%
! ATAGTTGTTAAGGGTAAAAA+CGG + chr7_3:4192877-4192896 Msa1090310:intron 25.0%
! GAAGATTCAAAATCATAGAA+TGG - chr7_3:4193212-4193231 None:intergenic 25.0%
! ATCTGAATTTGAATCTCATA+TGG + chr7_3:4193256-4193275 Msa1090310:intron 25.0%
! AAGTGTTAAATTTAGATCAG+TGG + chr7_3:4193406-4193425 Msa1090310:intron 25.0%
! TATCATAATGTTTAAGCAAC+AGG - chr7_3:4193471-4193490 None:intergenic 25.0%
! ATGTCTTCTCATAATATCAA+TGG + chr7_3:4193543-4193562 Msa1090310:intron 25.0%
!! GTAATTTTCAACACACTATT+TGG + chr7_3:4193584-4193603 Msa1090310:intron 25.0%
!!! TTTGTTTTTGCAGGTTTAAA+TGG + chr7_3:4193636-4193655 Msa1090310:intron 25.0%
! AACACTCTATACTAAATGTT+TGG + chr7_3:4193689-4193708 Msa1090310:intron 25.0%
! TCATAACCTTCTTCATTAAT+AGG + chr7_3:4193756-4193775 Msa1090310:intron 25.0%
! AATAAGCCTATTAATGAAGA+AGG - chr7_3:4193765-4193784 None:intergenic 25.0%
! TTCAATTGAGTATCATTGAA+AGG + chr7_3:4193836-4193855 Msa1090310:intron 25.0%
! ATTACAACTTTCTAATCCAA+AGG - chr7_3:4194096-4194115 None:intergenic 25.0%
!!! TCTTTTGTAATTGGCTTTTT+AGG + chr7_3:4194243-4194262 Msa1090310:intron 25.0%
!! ACAAATTTTACCTGCTTTAA+AGG - chr7_3:4194505-4194524 None:intergenic 25.0%
! TAATGGCTCAAGTTAAAAAT+GGG - chr7_3:4194558-4194577 None:intergenic 25.0%
! TTAATGGCTCAAGTTAAAAA+TGG - chr7_3:4194559-4194578 None:intergenic 25.0%
!!! GAGCCATTAATTTTTTTGTT+TGG + chr7_3:4194569-4194588 Msa1090310:intron 25.0%
!!! AGTGAATTGATTTTGACTAA+TGG + chr7_3:4194616-4194635 Msa1090310:intron 25.0%
! TTTATTTGAATCATAGGACT+TGG + chr7_3:4194671-4194690 Msa1090310:intron 25.0%
! TTATTTGAATCATAGGACTT+GGG + chr7_3:4194672-4194691 Msa1090310:intron 25.0%
!!! TGATATTTTTTTCAGATGTG+AGG - chr7_3:4194713-4194732 None:intergenic 25.0%
!! GTAGTTTGCATAAACAATAA+AGG - chr7_3:4194912-4194931 None:intergenic 25.0%
! CAAACTACTTATAAAGACTA+AGG + chr7_3:4194924-4194943 Msa1090310:intron 25.0%
!! ATTGATAATTCCAAAAGACT+AGG + chr7_3:4195015-4195034 Msa1090310:intron 25.0%
! TGATAACTTCATTACTTCTA+AGG - chr7_3:4195758-4195777 None:intergenic 25.0%
!!! CGTATTTTGGAGTTTTTATA+TGG - chr7_3:4195831-4195850 None:intergenic 25.0%
! ATAAAAACTCCAAAATACGT+AGG + chr7_3:4195832-4195851 Msa1090310:intron 25.0%
! TGTGTAAGATATTATCTAGA+CGG - chr7_3:4196116-4196135 None:intergenic 25.0%
!! CTTACACATTTTATCAAGAT+TGG + chr7_3:4196128-4196147 Msa1090310:intron 25.0%
! ACCAAAAATACATGAATAGT+AGG - chr7_3:4196336-4196355 None:intergenic 25.0%
! TCACTTATTATACTCATTAC+CGG + chr7_3:4196509-4196528 Msa1090310:intron 25.0%
!! ATGATTCTAGTTATATAGAC+CGG - chr7_3:4196531-4196550 None:intergenic 25.0%
!!! TTGACAAGACCATTTTTTTA+AGG - chr7_3:4196762-4196781 None:intergenic 25.0%
! GAATAACGTTGTTATAAAAC+TGG + chr7_3:4197256-4197275 Msa1090310:intron 25.0%
! AAAACAATGGATCTAAAGAA+TGG - chr7_3:4197414-4197433 None:intergenic 25.0%
! AATAGGCTGTAAAAAAACAA+TGG - chr7_3:4197427-4197446 None:intergenic 25.0%
! GTCTATTATTGAATATGTTG+AGG + chr7_3:4197992-4198011 Msa1090310:intron 25.0%
! CATAATACATTATGTTAGTG+TGG - chr7_3:4198039-4198058 None:intergenic 25.0%
!!! ATTTATGGACTTCTAGAATA+TGG + chr7_3:4198203-4198222 Msa1090310:intron 25.0%
!! TTTGGTGATTTAGTGATTAT+TGG + chr7_3:4198241-4198260 Msa1090310:intron 25.0%
! TAACTCTTGGCATAAATATT+TGG - chr7_3:4198570-4198589 None:intergenic 25.0%
! AATCCAATATCAATAACTCT+TGG - chr7_3:4198583-4198602 None:intergenic 25.0%
!!! TCTTGTTTTCTCACTTTAAT+TGG + chr7_3:4198836-4198855 Msa1090310:intron 25.0%
!!! TTTAATTGGTTTTACTTTCC+AGG + chr7_3:4198850-4198869 Msa1090310:intron 25.0%
! TCTCCAAAATAAGTAAATTC+TGG - chr7_3:4198910-4198929 None:intergenic 25.0%
! TATCTTATGCATTGAAAACA+GGG - chr7_3:4199016-4199035 None:intergenic 25.0%
! TTATCTTATGCATTGAAAAC+AGG - chr7_3:4199017-4199036 None:intergenic 25.0%
! TTCAACAAAATTGATAGAGT+TGG - chr7_3:4199056-4199075 None:intergenic 25.0%
! GTATTCCATTAAGATGAAAA+CGG + chr7_3:4199141-4199160 Msa1090310:intron 25.0%
! TTCTAATCGAAATAATGGTA+AGG + chr7_3:4199246-4199265 Msa1090310:intron 25.0%
!!! TTTTTCCTCTCTAAAATAGT+TGG + chr7_3:4199376-4199395 Msa1090310:intron 25.0%
!! TGGAAAGATTTTTCCATTAT+TGG + chr7_3:4199396-4199415 Msa1090310:intron 25.0%
! TACCTTCAATAAGTATTCAA+TGG + chr7_3:4199442-4199461 Msa1090310:intron 25.0%
! TACCATTGAATACTTATTGA+AGG - chr7_3:4199447-4199466 None:intergenic 25.0%
!!! AATTCACTGTTTTAAAACTC+TGG - chr7_3:4199553-4199572 None:intergenic 25.0%
!! TTCACCAACAATAATGTTTT+TGG + chr7_3:4199626-4199645 Msa1090310:intron 25.0%
! AGAACCAAAAACATTATTGT+TGG - chr7_3:4199633-4199652 None:intergenic 25.0%
!!! ACAATAATGTTTTTGGTTCT+TGG + chr7_3:4199633-4199652 Msa1090310:intron 25.0%
!! ATTAGTCTATGAGTATGATT+GGG - chr7_3:4199822-4199841 None:intergenic 25.0%
!! AATTAGTCTATGAGTATGAT+TGG - chr7_3:4199823-4199842 None:intergenic 25.0%
! ATCATACTCATAGACTAATT+TGG + chr7_3:4199823-4199842 Msa1090310:intron 25.0%
! TATCATTTGCTTTCTTAATG+AGG + chr7_3:4200025-4200044 Msa1090310:intron 25.0%
! ATCATTTGCTTTCTTAATGA+GGG + chr7_3:4200026-4200045 Msa1090310:intron 25.0%
! AGAAATTATCATGCAAAACT+GGG - chr7_3:4200171-4200190 None:intergenic 25.0%
! AAGAAATTATCATGCAAAAC+TGG - chr7_3:4200172-4200191 None:intergenic 25.0%
!!! TCTTATTCACTTTTTTTTCC+TGG + chr7_3:4200314-4200333 Msa1090310:intron 25.0%
!! TACATTATCAGAAAAAGTGT+TGG + chr7_3:4200431-4200450 Msa1090310:intron 25.0%
! TCGTTACATAGTATTTGTTT+AGG + chr7_3:4200758-4200777 Msa1090310:intron 25.0%
! CGTTACATAGTATTTGTTTA+GGG + chr7_3:4200759-4200778 Msa1090310:intron 25.0%
! GTTACATAGTATTTGTTTAG+GGG + chr7_3:4200760-4200779 Msa1090310:intron 25.0%
!!! TGTTCTTTGGTTTATTGTTT+TGG + chr7_3:4200838-4200857 Msa1090310:intron 25.0%
! TTGGCATTATAAGGATATTT+AGG - chr7_3:4200996-4201015 None:intergenic 25.0%
! TAAATATCCTTATAATGCCA+AGG + chr7_3:4200995-4201014 Msa1090310:intron 25.0%
! GAAAATAGAGATTAATGAGT+TGG + chr7_3:4201175-4201194 Msa1090310:intron 25.0%
! ATAAGCTATTTATGGAAACA+AGG - chr7_3:4201581-4201600 None:intergenic 25.0%
! AAGTGATTGAATATATCTGT+TGG + chr7_3:4201723-4201742 Msa1090310:intron 25.0%
!!! CTAATCATTTTGACAAAATG+TGG + chr7_3:4201911-4201930 Msa1090310:intron 25.0%
!!! GACCTTTTTGAAATATTCAT+AGG + chr7_3:4201992-4202011 Msa1090310:intron 25.0%
! TCCCTATGAATATTTCAAAA+AGG - chr7_3:4201997-4202016 None:intergenic 25.0%
! CATAATTTCAACGACTAATT+TGG + chr7_3:4202090-4202109 Msa1090310:intron 25.0%
! ACAAAATTAGTAACTTTCAC+CGG - chr7_3:4202134-4202153 None:intergenic 25.0%
!!! TGTTTTTTGAGTGATATAGT+CGG + chr7_3:4202295-4202314 Msa1090310:intron 25.0%
! TTAATTTATGACATAGTGCA+TGG - chr7_3:4202420-4202439 None:intergenic 25.0%
! TTTCAAAACTATTATAGAGG+TGG + chr7_3:4202536-4202555 Msa1090310:three_prime_UTR 25.0%
!! TCATGTTTTCATGATTTCAA+GGG - chr7_3:4202932-4202951 None:intergenic 25.0%
! CGACAAGTTTAAAAATATTG+TGG + chr7_3:4203080-4203099 Msa1090310:three_prime_UTR 25.0%
! GATGAATGCAAAATATTAGA+TGG - chr7_3:4203694-4203713 None:intergenic 25.0%
! TTGTAGAACAAATTAAGATG+GGG - chr7_3:4203845-4203864 None:intergenic 25.0%
! CTTTGTAGAACAAATTAAGA+TGG - chr7_3:4203847-4203866 None:intergenic 25.0%
!! TAGAATTCTGAAGACATATA+AGG + chr7_3:4204005-4204024 Msa1090310:intron 25.0%
!! AGAATTCTGAAGACATATAA+GGG + chr7_3:4204006-4204025 Msa1090310:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr7_3:4204148-4204167 None:intergenic 25.0%
! TACCGAATACAAAATCAAAT+AGG - chr7_3:4204219-4204238 None:intergenic 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr7_3:4204231-4204250 Msa1090310:intron 25.0%
! TACCGAATATAAAACCAAAT+AGG - chr7_3:4204506-4204525 None:intergenic 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr7_3:4204231-4204250 Msa1090310:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4204574-4204593 None:intergenic 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4204648-4204667 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4204660-4204679 Msa1090310:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4204574-4204593 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr7_3:4204575-4204594 Msa1090310:intron 25.0%
!!! AACCTATTTGGTTTTGTATT+CGG + chr7_3:4204785-4204804 Msa1090310:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG - chr7_3:4204840-4204859 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG - chr7_3:4204556-4204575 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! AAATGATATGTGAACCTATT+TGG + chr7_3:4205071-4205090 Msa1090310:intron 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG + chr7_3:4205083-4205102 Msa1090310:intron 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG + chr7_3:4205140-4205159 Msa1090310:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4204648-4204667 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4204660-4204679 Msa1090310:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4204574-4204593 None:intergenic 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4204648-4204667 None:intergenic 25.0%
!! TATTCGGAAAATGAAAGTAT+TGG + chr7_3:4205384-4205403 Msa1090310:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4204574-4204593 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr7_3:4204575-4204594 Msa1090310:intron 25.0%
!!! AACCTATTTGGTTTTGTATT+CGG + chr7_3:4204785-4204804 Msa1090310:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG - chr7_3:4204840-4204859 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG - chr7_3:4204556-4204575 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! AAATGATATGTGAACCTATT+TGG + chr7_3:4205071-4205090 Msa1090310:intron 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG + chr7_3:4205083-4205102 Msa1090310:intron 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG + chr7_3:4205140-4205159 Msa1090310:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4204648-4204667 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4204660-4204679 Msa1090310:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4204574-4204593 None:intergenic 25.0%
! ATATGGTTAGAAGTTTGATA+AGG + chr7_3:4204574-4204593 Msa1090310:intron 25.0%
!! GTTTGATAAGGTTTGAAATT+CGG + chr7_3:4206035-4206054 Msa1090310:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4204648-4204667 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4204660-4204679 Msa1090310:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4204574-4204593 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr7_3:4204575-4204594 Msa1090310:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG - chr7_3:4204840-4204859 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG - chr7_3:4204556-4204575 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4204557-4204576 Msa1090310:intron 25.0%
! AACATTATGTTACGCAATAA+AGG - chr7_3:4206456-4206475 None:intergenic 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG + chr7_3:4205083-4205102 Msa1090310:intron 25.0%
!!! AAATTTCATTTTTCCGACAA+GGG - chr7_3:4206673-4206692 None:intergenic 25.0%
!!! AAAATTTCATTTTTCCGACA+AGG - chr7_3:4206674-4206693 None:intergenic 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG + chr7_3:4205140-4205159 Msa1090310:intron 25.0%
!!! ATTTTTAAGCCAAGTTTGTT+TGG + chr7_3:4206930-4206949 Msa1090310:intron 25.0%
!!! ACTAGGTTCAAATCATTTTT+GGG - chr7_3:4207002-4207021 None:intergenic 25.0%
!! AACTAGGTTCAAATCATTTT+TGG - chr7_3:4207003-4207022 None:intergenic 25.0%
! TAGAAATTTGATAAATGGGA+AGG + chr7_3:4207198-4207217 Msa1090310:intron 25.0%
!! ACTTGATATTTAAGACTAGT+TGG + chr7_3:4207361-4207380 Msa1090310:intron 25.0%
! AAAAGAGTAAAGATGCAAAT+GGG - chr7_3:4207576-4207595 None:intergenic 25.0%
! AAAAAGAGTAAAGATGCAAA+TGG - chr7_3:4207577-4207596 None:intergenic 25.0%
!! GCAGATAAAGTTTTCTTAAT+CGG - chr7_3:4207665-4207684 None:intergenic 25.0%
! CCAATTTATTGATCTCTTTA+CGG + chr7_3:4207775-4207794 Msa1090310:intron 25.0%
! ATCATACAAAAGCAAATTCA+AGG + chr7_3:4207936-4207955 Msa1090310:three_prime_UTR 25.0%
!! TAATTTTCTGCCATTGAATA+AGG + chr7_3:4207967-4207986 Msa1090310:three_prime_UTR 25.0%
!! GTCATGTTATTTATCTACTT+TGG + chr7_3:4208121-4208140 Msa1090310:intron 25.0%
! TATGAAATTGCTCAAAGTTA+GGG - chr7_3:4208173-4208192 None:intergenic 25.0%
! ATATGAAATTGCTCAAAGTT+AGG - chr7_3:4208174-4208193 None:intergenic 25.0%
! TCTAACATACTTATATTAGC+AGG - chr7_3:4208241-4208260 None:intergenic 25.0%
! GTAGTAAGTTGTGTAAAAAA+TGG + chr7_3:4208484-4208503 Msa1090310:three_prime_UTR 25.0%
! ATACAAAGCTTCTTTATTGA+CGG + chr7_3:4208600-4208619 Msa1090310:three_prime_UTR 25.0%
!!! AAATGCGATTTTAGCTTATA+TGG + chr7_3:4208871-4208890 Msa1090310:three_prime_UTR 25.0%
!!! CACATCATGTTTTAAATCAA+GGG - chr7_3:4208931-4208950 None:intergenic 25.0%
!!! TCACATCATGTTTTAAATCA+AGG - chr7_3:4208932-4208951 None:intergenic 25.0%
! AACCGAATACAAAACTAAAT+AGG - chr7_3:4208956-4208975 None:intergenic 25.0%
GTAAAACCAATTGAATGTTC+TGG - chr7_3:4192650-4192669 None:intergenic 30.0%
AATTGAGAAATAAGAGAAGG+AGG - chr7_3:4192722-4192741 None:intergenic 30.0%
!! TCGATTCTCAATTTGTTGTT+GGG - chr7_3:4192928-4192947 None:intergenic 30.0%
!! ATCGATTCTCAATTTGTTGT+TGG - chr7_3:4192929-4192948 None:intergenic 30.0%
! CTTTTGGTAGAATTGAGTTT+GGG + chr7_3:4192971-4192990 Msa1090310:intron 30.0%
TTGACCTTGAATTGTTTGTA+CGG - chr7_3:4193048-4193067 None:intergenic 30.0%
! TTGTTGGGTATGTTTTTCTT+AGG + chr7_3:4193329-4193348 Msa1090310:intron 30.0%
!!! TAATTGTGTTTTTGGACTGT+TGG + chr7_3:4193359-4193378 Msa1090310:intron 30.0%
AAACAACGAGCAAAAGTTTA+AGG - chr7_3:4193910-4193929 None:intergenic 30.0%
TTACTAGAAACCAAAACACA+AGG - chr7_3:4193998-4194017 None:intergenic 30.0%
TGAAATATGATCATTGCCTT+TGG + chr7_3:4194077-4194096 Msa1090310:intron 30.0%
TTTCTCGTCTGAAGAATTTA+TGG - chr7_3:4194431-4194450 None:intergenic 30.0%
AAATATCACCTGCATATTAG+AGG + chr7_3:4194725-4194744 Msa1090310:intron 30.0%
CACTCAACATGAATCATTAT+AGG + chr7_3:4194816-4194835 Msa1090310:intron 30.0%
! TCAAACTTCTCATTGGTTAT+TGG - chr7_3:4194843-4194862 None:intergenic 30.0%
TTATACACAATTTACCAGAC+AGG + chr7_3:4194956-4194975 Msa1090310:intron 30.0%
TATACACAATTTACCAGACA+GGG + chr7_3:4194957-4194976 Msa1090310:intron 30.0%
!! TATCTTATCACCTAGTCTTT+TGG - chr7_3:4195028-4195047 None:intergenic 30.0%
TTGCTCCTTCAATACAAAAT+AGG + chr7_3:4195220-4195239 Msa1090310:intron 30.0%
! TCTGATATTGAGTTCTGATT+GGG - chr7_3:4195441-4195460 None:intergenic 30.0%
! TTCTGATATTGAGTTCTGAT+TGG - chr7_3:4195442-4195461 None:intergenic 30.0%
AGAACTCAATATCAGAATCT+CGG + chr7_3:4195445-4195464 Msa1090310:intron 30.0%
AAAGTTATCCAGAACAGATT+GGG - chr7_3:4195512-4195531 None:intergenic 30.0%
AAAAGTTATCCAGAACAGAT+TGG - chr7_3:4195513-4195532 None:intergenic 30.0%
! TAACTTCATTACTTCTAAGG+TGG - chr7_3:4195755-4195774 None:intergenic 30.0%
!! TAATCTAGTCTTACCAAAAG+AGG - chr7_3:4195788-4195807 None:intergenic 30.0%
!! ACTTATTAGCCTACGTATTT+TGG - chr7_3:4195844-4195863 None:intergenic 30.0%
!!! ATCAAGATTGGGTGTTTTTT+TGG + chr7_3:4196140-4196159 Msa1090310:intron 30.0%
! GCCTACTATTCATGTATTTT+TGG + chr7_3:4196332-4196351 Msa1090310:intron 30.0%
! ATTTTTGTTGACATACTGCT+AGG - chr7_3:4196450-4196469 None:intergenic 30.0%
TGATATAAAAGCAGATGGAA+AGG - chr7_3:4197005-4197024 None:intergenic 30.0%
CAACTTGATATAAAAGCAGA+TGG - chr7_3:4197010-4197029 None:intergenic 30.0%
TTTCAAAATGAGATCTACGA+TGG - chr7_3:4197099-4197118 None:intergenic 30.0%
!!! ATCACAATCGGAATTTTTTC+TGG + chr7_3:4197175-4197194 Msa1090310:intron 30.0%
ATAACAACGTTATTCTGTCA+CGG - chr7_3:4197251-4197270 None:intergenic 30.0%
! GAACGATGTAGACTAATTTT+TGG + chr7_3:4197284-4197303 Msa1090310:intron 30.0%
AAAATAGAGGAAGAGAGAAT+AGG - chr7_3:4197444-4197463 None:intergenic 30.0%
!!! TCTTTCTGTATCTTTTTTCG+CGG + chr7_3:4197830-4197849 Msa1090310:intron 30.0%
!! CTATGAAACTTGTTGTTGAA+TGG + chr7_3:4198135-4198154 Msa1090310:three_prime_UTR 30.0%
!! CTATTTCTAACTGATTCGAA+TGG + chr7_3:4198178-4198197 Msa1090310:three_prime_UTR 30.0%
! CTGATTCGAATGGTAATTTA+TGG + chr7_3:4198188-4198207 Msa1090310:intron 30.0%
AAGATATTAGCATGCAAAGT+TGG - chr7_3:4198284-4198303 None:intergenic 30.0%
AACTTTGCATGCTAATATCT+TGG + chr7_3:4198283-4198302 Msa1090310:intron 30.0%
ACTTTGCATGCTAATATCTT+GGG + chr7_3:4198284-4198303 Msa1090310:intron 30.0%
GATGAAGAAATGAAGTAAGA+AGG - chr7_3:4198468-4198487 None:intergenic 30.0%
! TTCTAAAGGTTAGTGAAGAA+TGG - chr7_3:4198532-4198551 None:intergenic 30.0%
ATGCCAAGAGTTATTGATAT+TGG + chr7_3:4198577-4198596 Msa1090310:intron 30.0%
TAAACTGAATTATTGTGTGC+AGG + chr7_3:4198685-4198704 Msa1090310:intron 30.0%
AAGATGCTAATTAGCTACTA+AGG - chr7_3:4198738-4198757 None:intergenic 30.0%
TTGAATCAGATAACAAACCT+TGG + chr7_3:4198770-4198789 Msa1090310:three_prime_UTR 30.0%
! TTTTGCAATATTCCTTACCA+AGG - chr7_3:4198790-4198809 None:intergenic 30.0%
CCAAAATAAGTAAATTCTGG+AGG - chr7_3:4198907-4198926 None:intergenic 30.0%
! CCTCCAGAATTTACTTATTT+TGG + chr7_3:4198904-4198923 Msa1090310:three_prime_UTR 30.0%
GATTACCACTTACAAAATCA+AGG + chr7_3:4198928-4198947 Msa1090310:three_prime_UTR 30.0%
TGTTGAACTATATAACACGT+TGG + chr7_3:4199069-4199088 Msa1090310:intron 30.0%
! GTAAGGTGATACTCTAATTT+TGG + chr7_3:4199263-4199282 Msa1090310:intron 30.0%
!! TCTAATTTTGGTCTGAATGA+AGG + chr7_3:4199275-4199294 Msa1090310:intron 30.0%
!! TCTTTCCAACTATTTTAGAG+AGG - chr7_3:4199384-4199403 None:intergenic 30.0%
! TTGTGCATTTTCAGAAACAA+TGG + chr7_3:4199571-4199590 Msa1090310:intron 30.0%
!! TTCTTGGTTCTAAACTACTT+GGG + chr7_3:4199649-4199668 Msa1090310:intron 30.0%
AATTTGCCTCTAATTTCTGT+TGG + chr7_3:4199683-4199702 Msa1090310:intron 30.0%
ATTTGCCTCTAATTTCTGTT+GGG + chr7_3:4199684-4199703 Msa1090310:intron 30.0%
AAATTCCCAACAGAAATTAG+AGG - chr7_3:4199692-4199711 None:intergenic 30.0%
TCTATTATCAATAGGGTCAA+TGG - chr7_3:4200382-4200401 None:intergenic 30.0%
! ATTTAAACGCAGCTTTGTAA+TGG + chr7_3:4200402-4200421 Msa1090310:intron 30.0%
! TTTAAACGCAGCTTTGTAAT+GGG + chr7_3:4200403-4200422 Msa1090310:intron 30.0%
CCATGGATATTAAGAGTTTA+AGG - chr7_3:4200473-4200492 None:intergenic 30.0%
CCTTAAACTCTTAATATCCA+TGG + chr7_3:4200470-4200489 Msa1090310:intron 30.0%
! AGAGGCAATTGATTTATTTC+AGG - chr7_3:4200571-4200590 None:intergenic 30.0%
GAAATAAATCAATTGCCTCT+TGG + chr7_3:4200571-4200590 Msa1090310:intron 30.0%
! ACGCTTTTCATTTACTTAGA+CGG + chr7_3:4200643-4200662 Msa1090310:intron 30.0%
GGGCTGATTAAAGAATAATT+TGG + chr7_3:4200684-4200703 Msa1090310:intron 30.0%
AATGAGTTATGTAAAATGCG+AGG + chr7_3:4200708-4200727 Msa1090310:intron 30.0%
TATTTGTTTAGGGGATATGT+GGG + chr7_3:4200769-4200788 Msa1090310:intron 30.0%
!!! CTTTGGTTTATTGTTTTGGA+AGG + chr7_3:4200842-4200861 Msa1090310:intron 30.0%
!!! GTTTATTGTTTTGGAAGGAT+AGG + chr7_3:4200847-4200866 Msa1090310:intron 30.0%
CAATATTGGGAAGATTTGTA+GGG + chr7_3:4200927-4200946 Msa1090310:intron 30.0%
! CAAAAGCTTTTAATCACTTC+TGG + chr7_3:4201334-4201353 Msa1090310:intron 30.0%
! AAAGTGTGTATTTTCTGTCA+CGG - chr7_3:4201458-4201477 None:intergenic 30.0%
ACAGAAAATACACACTTTGT+TGG + chr7_3:4201460-4201479 Msa1090310:intron 30.0%
AGCAGCAAATAAGCTATTTA+TGG - chr7_3:4201589-4201608 None:intergenic 30.0%
CATCTCTATGTCGATATTAA+AGG - chr7_3:4201795-4201814 None:intergenic 30.0%
GATTATGAATAAACGAACGA+AGG - chr7_3:4201839-4201858 None:intergenic 30.0%
TGACAACACCCAAATTTATA+GGG - chr7_3:4201883-4201902 None:intergenic 30.0%
ATGACAACACCCAAATTTAT+AGG - chr7_3:4201884-4201903 None:intergenic 30.0%
!! TACCTCTAAAACAATGAAGT+TGG - chr7_3:4202051-4202070 None:intergenic 30.0%
!!! AACTTCATTGTTTTAGAGGT+AGG + chr7_3:4202050-4202069 Msa1090310:intron 30.0%
!!! ACTTCATTGTTTTAGAGGTA+GGG + chr7_3:4202051-4202070 Msa1090310:intron 30.0%
AATTTCAACGACTAATTTGG+TGG + chr7_3:4202093-4202112 Msa1090310:intron 30.0%
TCATATGAGAAAAATTCCTC+AGG - chr7_3:4202175-4202194 None:intergenic 30.0%
! TGAGGAATTTTTCTCATATG+AGG + chr7_3:4202174-4202193 Msa1090310:intron 30.0%
TGTTAAGTGAAAGACATGAT+TGG + chr7_3:4202459-4202478 Msa1090310:intron 30.0%
TTGAATGCTTAATTGCAGAA+AGG + chr7_3:4202509-4202528 Msa1090310:intron 30.0%
AAAACTATTATAGAGGTGGT+TGG + chr7_3:4202540-4202559 Msa1090310:three_prime_UTR 30.0%
AATTGCCTATCATCATTCAA+CGG - chr7_3:4202576-4202595 None:intergenic 30.0%
! ACATTTTCCTTGTAGTTCAA+TGG - chr7_3:4202618-4202637 None:intergenic 30.0%
TTGAAATTTGGAGATTATGC+TGG + chr7_3:4202694-4202713 Msa1090310:three_prime_UTR 30.0%
ATGAGATAAATACATGACGA+TGG + chr7_3:4202889-4202908 Msa1090310:three_prime_UTR 30.0%
AAATACATGACGATGGATAA+TGG + chr7_3:4202896-4202915 Msa1090310:three_prime_UTR 30.0%
AATACATGACGATGGATAAT+GGG + chr7_3:4202897-4202916 Msa1090310:three_prime_UTR 30.0%
! CTCATGTTTTCATGATTTCA+AGG - chr7_3:4202933-4202952 None:intergenic 30.0%
CTTGAAATCATGAAAACATG+AGG + chr7_3:4202931-4202950 Msa1090310:three_prime_UTR 30.0%
AAAGAATAATCAGCCACAAT+TGG + chr7_3:4203104-4203123 Msa1090310:three_prime_UTR 30.0%
! CAGAATTCACAACTTTTGTT+TGG - chr7_3:4203188-4203207 None:intergenic 30.0%
TATGTAGATCATGTTCAGTT+AGG - chr7_3:4203287-4203306 None:intergenic 30.0%
! GTATTATTTGAAACTTCCCA+GGG - chr7_3:4203483-4203502 None:intergenic 30.0%
! AGTATTATTTGAAACTTCCC+AGG - chr7_3:4203484-4203503 None:intergenic 30.0%
TTAAGATGGATGGTAAGTTA+TGG + chr7_3:4203891-4203910 Msa1090310:intron 30.0%
GAAGACATATAAGGGTAATA+TGG + chr7_3:4204014-4204033 Msa1090310:intron 30.0%
!! AAATCTCATTTTCGAGACAA+GGG - chr7_3:4204262-4204281 None:intergenic 30.0%
!! AAAATCTCATTTTCGAGACA+AGG - chr7_3:4204263-4204282 None:intergenic 30.0%
! TTGTCTCGAAAATGAGATTT+TGG + chr7_3:4204262-4204281 Msa1090310:intron 30.0%
!! AAATGAGATTTTGGCCTATA+AGG + chr7_3:4204271-4204290 Msa1090310:intron 30.0%
!! TATCAAACTTGTAGCCTTAT+AGG - chr7_3:4204288-4204307 None:intergenic 30.0%
! AGGCTACAAGTTTGATAATT+AGG + chr7_3:4204291-4204310 Msa1090310:intron 30.0%
CATATCATGTTTCGCATTAA+GGG - chr7_3:4204341-4204360 None:intergenic 30.0%
ACATATCATGTTTCGCATTA+AGG - chr7_3:4204342-4204361 None:intergenic 30.0%
!!! ACCCTATTTGGTTTTGTTTT+CGG + chr7_3:4204363-4204382 Msa1090310:intron 30.0%
ACCGAAAACAAAACCAAATA+GGG - chr7_3:4204367-4204386 None:intergenic 30.0%
TACCGAAAACAAAACCAAAT+AGG - chr7_3:4204368-4204387 None:intergenic 30.0%
ATGGCTATAAGTTTGATGAA+TGG + chr7_3:4204438-4204457 Msa1090310:intron 30.0%
TGGCTATAAGTTTGATGAAT+GGG + chr7_3:4204439-4204458 Msa1090310:intron 30.0%
CATATCATGTTTCTCATCAA+GGG - chr7_3:4204479-4204498 None:intergenic 30.0%
ACATATCATGTTTCTCATCA+AGG - chr7_3:4204480-4204499 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4204202-4204221 Msa1090310:intron 30.0%
! ACATGATTTGTGAACCTATT+TGG + chr7_3:4204631-4204650 Msa1090310:intron 30.0%
CATATCATGTTTCGTATCAA+GGG - chr7_3:4204763-4204782 None:intergenic 30.0%
ACATATCATGTTTCGTATCA+AGG - chr7_3:4204764-4204783 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4204202-4204221 Msa1090310:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+TGG - chr7_3:4204833-4204852 None:intergenic 30.0%
!! CATATCATTTTTCGCATCAA+GGG - chr7_3:4205061-4205080 None:intergenic 30.0%
!! ACATATCATTTTTCGCATCA+AGG - chr7_3:4205062-4205081 None:intergenic 30.0%
TACCGAATTTCAAACCAAAT+AGG - chr7_3:4205088-4205107 None:intergenic 30.0%
! AAATTTCATTTTCGCGACAA+GGG - chr7_3:4205131-4205150 None:intergenic 30.0%
! AAAATTTCATTTTCGCGACA+AGG - chr7_3:4205132-4205151 None:intergenic 30.0%
TATCAAACTTCTAACCACAT+AGG - chr7_3:4205157-4205176 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4204202-4204221 Msa1090310:intron 30.0%
! ACATGATTTGTGAACCTATT+TGG + chr7_3:4204631-4204650 Msa1090310:intron 30.0%
CATATCATGTTTCGTATCAA+GGG - chr7_3:4204763-4204782 None:intergenic 30.0%
ACATATCATGTTTCGTATCA+AGG - chr7_3:4204764-4204783 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4204202-4204221 Msa1090310:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+TGG - chr7_3:4204833-4204852 None:intergenic 30.0%
!! CATATCATTTTTCGCATCAA+GGG - chr7_3:4205061-4205080 None:intergenic 30.0%
!! ACATATCATTTTTCGCATCA+AGG - chr7_3:4205062-4205081 None:intergenic 30.0%
TACCGAATTTCAAACCAAAT+AGG - chr7_3:4205088-4205107 None:intergenic 30.0%
! AAATTTCATTTTCGCGACAA+GGG - chr7_3:4205131-4205150 None:intergenic 30.0%
! AAAATTTCATTTTCGCGACA+AGG - chr7_3:4205132-4205151 None:intergenic 30.0%
TATCAAACTTCTAACCACAT+AGG - chr7_3:4205157-4205176 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4204202-4204221 Msa1090310:intron 30.0%
! ACATTTCATTTTCGCAACAA+GGG - chr7_3:4206083-4206102 None:intergenic 30.0%
! AACATTTCATTTTCGCAACA+AGG - chr7_3:4206084-4206103 None:intergenic 30.0%
! AAATGAAATGTTAGCCTATG+TGG + chr7_3:4206092-4206111 Msa1090310:intron 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4204202-4204221 Msa1090310:intron 30.0%
ATATGTGAACCTATTTGGTT+TGG + chr7_3:4204494-4204513 Msa1090310:intron 30.0%
!! AACCTATTTGGTTTGGTATT+CGG + chr7_3:4206320-4206339 Msa1090310:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+CGG - chr7_3:4204833-4204852 None:intergenic 30.0%
AACATGATATGGAACCTATT+TGG + chr7_3:4206613-4206632 Msa1090310:intron 30.0%
TACCGAATTTCAAACCAAAT+AGG - chr7_3:4205088-4205107 None:intergenic 30.0%
TGGTTGCAAGTTTGATAAAT+GGG + chr7_3:4206702-4206721 Msa1090310:intron 30.0%
AAAATCATGTTTCGCATCAA+GGG - chr7_3:4206915-4206934 None:intergenic 30.0%
AAAAATCATGTTTCGCATCA+AGG - chr7_3:4206916-4206935 None:intergenic 30.0%
!!! TTCAAATCATTTTTGGGTTG+AGG - chr7_3:4206996-4207015 None:intergenic 30.0%
!! GTTAAGAGATCTTTCAAGTT+TGG + chr7_3:4207505-4207524 Msa1090310:three_prime_UTR 30.0%
! CAATGATTGCTGAAGTTTTT+AGG + chr7_3:4207534-4207553 Msa1090310:three_prime_UTR 30.0%
CCGTAAAGAGATCAATAAAT+TGG - chr7_3:4207778-4207797 None:intergenic 30.0%
TTCCTATTTAGTTACACTCA+CGG + chr7_3:4207861-4207880 Msa1090310:three_prime_UTR 30.0%
! TTTTGTATGATGATTGCACT+CGG - chr7_3:4207927-4207946 None:intergenic 30.0%
TAGCATCAAACCTTATTCAA+TGG - chr7_3:4207980-4207999 None:intergenic 30.0%
ATACTTATATTAGCAGGACA+TGG - chr7_3:4208235-4208254 None:intergenic 30.0%
TGTTGAATAATCATCTTTCC+AGG + chr7_3:4208285-4208304 Msa1090310:intron 30.0%
! ATGTGCTTTTCTTTCAACTA+AGG + chr7_3:4208339-4208358 Msa1090310:three_prime_UTR 30.0%
AAGAGAGTCACTAAAATTCA+AGG - chr7_3:4208390-4208409 None:intergenic 30.0%
AAGTTGTGTAAAAAATGGGA+AGG + chr7_3:4208489-4208508 Msa1090310:three_prime_UTR 30.0%
GTTGGATTCAGATGATAAAT+AGG - chr7_3:4208547-4208566 None:intergenic 30.0%
! TTCAATATGCAGTCTTATCA+AGG + chr7_3:4208631-4208650 Msa1090310:three_prime_UTR 30.0%
CGGTTTACATGTTTGAAAAT+TGG + chr7_3:4208743-4208762 Msa1090310:three_prime_UTR 30.0%
TGAAAATTGGAAGTTTGAAC+TGG + chr7_3:4208756-4208775 Msa1090310:three_prime_UTR 30.0%
GATTCTCCAGAACATTCAAT+TGG + chr7_3:4192641-4192660 Msa1090310:CDS 35.0%
ATAAGAGAAGGAGGAATGAA+GGG - chr7_3:4192713-4192732 None:intergenic 35.0%
AATAAGAGAAGGAGGAATGA+AGG - chr7_3:4192714-4192733 None:intergenic 35.0%
! AACAATTGAAGCGCTAAATC+TGG + chr7_3:4192810-4192829 Msa1090310:CDS 35.0%
! ACAATTGAAGCGCTAAATCT+GGG + chr7_3:4192811-4192830 Msa1090310:CDS 35.0%
! GCTTTTGGTAGAATTGAGTT+TGG + chr7_3:4192970-4192989 Msa1090310:intron 35.0%
TTCACCGTACAAACAATTCA+AGG + chr7_3:4193041-4193060 Msa1090310:CDS 35.0%
AAGGCTAATTTGACAGCAAA+AGG - chr7_3:4193444-4193463 None:intergenic 35.0%
TGTTTAAGCAACAGGATCAA+AGG - chr7_3:4193463-4193482 None:intergenic 35.0%
GAAGTGAAATTGAACTCTGA+TGG + chr7_3:4194289-4194308 Msa1090310:CDS 35.0%
TCAATTTCTTAATGGCAGCA+AGG - chr7_3:4194315-4194334 None:intergenic 35.0%
ATTATCAAGCATGTCAACAG+TGG - chr7_3:4194398-4194417 None:intergenic 35.0%
GTTAAAAATGGGCATTTCAG+CGG - chr7_3:4194547-4194566 None:intergenic 35.0%
AAGCATGTCAAACTTCTCAT+TGG - chr7_3:4194850-4194869 None:intergenic 35.0%
AGACTTGAAGGGATCAAATT+GGG + chr7_3:4194884-4194903 Msa1090310:intron 35.0%
CATGCTTGGTTAAGATTTCA+GGG + chr7_3:4195142-4195161 Msa1090310:intron 35.0%
TCCTATGCACTTTCAATGAA+AGG + chr7_3:4195190-4195209 Msa1090310:intron 35.0%
! TCCTTTCATTGAAAGTGCAT+AGG - chr7_3:4195194-4195213 None:intergenic 35.0%
! GCATGCCTATTTTGTATTGA+AGG - chr7_3:4195228-4195247 None:intergenic 35.0%
! TCAAAGCTAGGTTAGGTTTT+GGG - chr7_3:4195351-4195370 None:intergenic 35.0%
! TTCAAAGCTAGGTTAGGTTT+TGG - chr7_3:4195352-4195371 None:intergenic 35.0%
TCAATATCAGAATCTCGGAA+TGG + chr7_3:4195450-4195469 Msa1090310:intron 35.0%
TGACTCAATCTGAACTCAAA+CGG + chr7_3:4195480-4195499 Msa1090310:intron 35.0%
! TTATCAAACTCAGCCTCTTT+TGG + chr7_3:4195772-4195791 Msa1090310:intron 35.0%
TTAACCTCATCTTACATGCT+TGG - chr7_3:4195900-4195919 None:intergenic 35.0%
!!! GGTGTTTTTTTGGCGTTTTA+TGG + chr7_3:4196150-4196169 Msa1090310:intron 35.0%
! TTGGCGTTTTATGGTGTTTT+TGG + chr7_3:4196159-4196178 Msa1090310:intron 35.0%
! TGGCGTTTTATGGTGTTTTT+GGG + chr7_3:4196160-4196179 Msa1090310:intron 35.0%
TGCCTAAAAACACCAAAACT+GGG - chr7_3:4196234-4196253 None:intergenic 35.0%
! GTTTTATAGAGGAGATGAAG+GGG - chr7_3:4197143-4197162 None:intergenic 35.0%
!! GGTTTTATAGAGGAGATGAA+GGG - chr7_3:4197144-4197163 None:intergenic 35.0%
!! TTTCTCTGAGGGTTTTATAG+AGG - chr7_3:4197154-4197173 None:intergenic 35.0%
! CGATTGTGATTTTTCTCTGA+GGG - chr7_3:4197165-4197184 None:intergenic 35.0%
CCTCAGAGAAAAATCACAAT+CGG + chr7_3:4197163-4197182 Msa1090310:intron 35.0%
AAAGTGAGCTTACATGATGA+AGG - chr7_3:4197547-4197566 None:intergenic 35.0%
! GATTTTGGATCTCAGCTTAA+TGG + chr7_3:4197667-4197686 Msa1090310:intron 35.0%
TTGATGCTCAGAAAGTCATA+AGG - chr7_3:4198093-4198112 None:intergenic 35.0%
TCATAGACCATTGTAGTTTC+AGG - chr7_3:4198121-4198140 None:intergenic 35.0%
AGAAACCTACACGAATCTAT+TGG - chr7_3:4198416-4198435 None:intergenic 35.0%
! GAATCTCAAAAGGGTGTAAT+AGG + chr7_3:4198707-4198726 Msa1090310:three_prime_UTR 35.0%
TCAGATAACAAACCTTGGTA+AGG + chr7_3:4198775-4198794 Msa1090310:intron 35.0%
! GCTTACCTTGATTTTGTAAG+TGG - chr7_3:4198936-4198955 None:intergenic 35.0%
AGGGTAAACATATGGTATGT+TGG - chr7_3:4198967-4198986 None:intergenic 35.0%
CATAAGATAATGCGACAAAG+AGG + chr7_3:4199027-4199046 Msa1090310:intron 35.0%
! CACTTCCGTTTTCATCTTAA+TGG - chr7_3:4199149-4199168 None:intergenic 35.0%
! GCATTTTCAGAAACAATGGA+AGG + chr7_3:4199575-4199594 Msa1090310:intron 35.0%
!! GTTCTTGGTTCTAAACTACT+TGG + chr7_3:4199648-4199667 Msa1090310:intron 35.0%
!! TCTTGGTTCTAAACTACTTG+GGG + chr7_3:4199650-4199669 Msa1090310:intron 35.0%
TTCTAAACTACTTGGGGTAA+GGG + chr7_3:4199656-4199675 Msa1090310:intron 35.0%
!!! GTTGGGAATTTTTCAAGCAA+AGG + chr7_3:4199701-4199720 Msa1090310:intron 35.0%
TGGTAGTTTAGCCTCTTAAA+AGG + chr7_3:4199843-4199862 Msa1090310:intron 35.0%
! CTGTAAGCATTCCTTTTAAG+AGG - chr7_3:4199857-4199876 None:intergenic 35.0%
AACACTGGTGCTTTCATATA+TGG - chr7_3:4200256-4200275 None:intergenic 35.0%
TGTAATCTTTATCTTACGCC+AGG - chr7_3:4200335-4200354 None:intergenic 35.0%
! GCAATTGATTTATTTCAGGC+TGG - chr7_3:4200567-4200586 None:intergenic 35.0%
! CGCTTTTCATTTACTTAGAC+GGG + chr7_3:4200625-4200644 Msa1090310:intron 35.0%
TCATCCACAATGAGCAAATA+TGG + chr7_3:4200734-4200753 Msa1090310:intron 35.0%
GTATTTGTTTAGGGGATATG+TGG + chr7_3:4200768-4200787 Msa1090310:intron 35.0%
ATTTGTTTAGGGGATATGTG+GGG + chr7_3:4200770-4200789 Msa1090310:intron 35.0%
ACAAATCTTCCCAATATTGG+AGG - chr7_3:4200926-4200945 None:intergenic 35.0%
CCTACAAATCTTCCCAATAT+TGG - chr7_3:4200929-4200948 None:intergenic 35.0%
CCAATATTGGGAAGATTTGT+AGG + chr7_3:4200926-4200945 Msa1090310:intron 35.0%
CATTTCTCCTTGGCATTATA+AGG - chr7_3:4201005-4201024 None:intergenic 35.0%
!! AATCAATGCTTGATTTGTGC+AGG + chr7_3:4201115-4201134 Msa1090310:intron 35.0%
!! ATCAATGCTTGATTTGTGCA+GGG + chr7_3:4201116-4201135 Msa1090310:intron 35.0%
!! TTGATTTGTGCAGGGTAAAT+GGG + chr7_3:4201124-4201143 Msa1090310:intron 35.0%
GGTCTGTATTGAATTTGAAC+TGG + chr7_3:4201272-4201291 Msa1090310:intron 35.0%
TTCCATATTAGTGTCATGTC+CGG - chr7_3:4201685-4201704 None:intergenic 35.0%
!! TATATCTGTTGGTGTCATGT+CGG + chr7_3:4201734-4201753 Msa1090310:intron 35.0%
CTATGTCGATATTAAAGGTG+TGG - chr7_3:4201790-4201809 None:intergenic 35.0%
AATATCGACATAGAGATGCA+TGG + chr7_3:4201797-4201816 Msa1090310:intron 35.0%
AACGAAGGATAGATCTTCAA+GGG - chr7_3:4201824-4201843 None:intergenic 35.0%
! TTTATAGGGCGCTTTCAATT+AGG - chr7_3:4201869-4201888 None:intergenic 35.0%
!! TTGAAAGCGCCCTATAAATT+TGG + chr7_3:4201871-4201890 Msa1090310:intron 35.0%
!! TGAAAGCGCCCTATAAATTT+GGG + chr7_3:4201872-4201891 Msa1090310:intron 35.0%
!! TGTGGTCAGTTGATAGTAAA+TGG + chr7_3:4201929-4201948 Msa1090310:intron 35.0%
AGGGACCTGATTGATATTAA+AGG + chr7_3:4202012-4202031 Msa1090310:intron 35.0%
!!! GACCAACTTCATTGTTTTAG+AGG + chr7_3:4202046-4202065 Msa1090310:intron 35.0%
!! GTGGTTTACTCGTTTTTAAC+CGG + chr7_3:4202112-4202131 Msa1090310:intron 35.0%
ATGAGAAAAATTCCTCAGGT+TGG - chr7_3:4202171-4202190 None:intergenic 35.0%
! TGATATAGTCGGTTTCTGAA+TGG + chr7_3:4202306-4202325 Msa1090310:intron 35.0%
TAGTGCATGGATAGATATTG+CGG - chr7_3:4202407-4202426 None:intergenic 35.0%
TAATGCCGTTGAATGATGAT+AGG + chr7_3:4202568-4202587 Msa1090310:three_prime_UTR 35.0%
! TCAAATTTAGAACCTACAGC+TGG - chr7_3:4202678-4202697 None:intergenic 35.0%
ACATTCTTCTGCTTGAAACT+AGG - chr7_3:4202757-4202776 None:intergenic 35.0%
TTTCAAGCAGAAGAATGTTC+TGG + chr7_3:4202759-4202778 Msa1090310:three_prime_UTR 35.0%
AAAGTTCTACAAGGCAACTT+GGG + chr7_3:4202785-4202804 Msa1090310:three_prime_UTR 35.0%
CGTCATGTATTTATCTCATG+TGG - chr7_3:4202888-4202907 None:intergenic 35.0%
ATACATGACGATGGATAATG+GGG + chr7_3:4202898-4202917 Msa1090310:three_prime_UTR 35.0%
AACTGAACTTGACTTTGCAT+TGG - chr7_3:4202957-4202976 None:intergenic 35.0%
TTAAATCTAGTCCAAAGACC+TGG + chr7_3:4202975-4202994 Msa1090310:three_prime_UTR 35.0%
!!! GTTGTTTTAATCCAGGTCTT+TGG - chr7_3:4202989-4203008 None:intergenic 35.0%
CTGGATTAAAACAACCATCA+GGG + chr7_3:4202994-4203013 Msa1090310:three_prime_UTR 35.0%
CAAAACTAGATCCTTCAACA+GGG - chr7_3:4203049-4203068 None:intergenic 35.0%
TCAAAACTAGATCCTTCAAC+AGG - chr7_3:4203050-4203069 None:intergenic 35.0%
TAGTCATATTAGAACCAGCA+GGG - chr7_3:4203161-4203180 None:intergenic 35.0%
TTAGTCATATTAGAACCAGC+AGG - chr7_3:4203162-4203181 None:intergenic 35.0%
TGAAGTTGAACCTCAAGTAT+CGG + chr7_3:4203308-4203327 Msa1090310:three_prime_UTR 35.0%
TGCAGAGATAAGTTGTCAAT+CGG + chr7_3:4203383-4203402 Msa1090310:three_prime_UTR 35.0%
CAGAAAATGAGAAAAACCTG+AGG - chr7_3:4203456-4203475 None:intergenic 35.0%
ATACATGTCTGTCTTACATG+TGG + chr7_3:4203585-4203604 Msa1090310:three_prime_UTR 35.0%
CAACCACTTCTGTTTATATC+CGG + chr7_3:4203746-4203765 Msa1090310:intron 35.0%
TTTCCGGATATAAACAGAAG+TGG - chr7_3:4203752-4203771 None:intergenic 35.0%
!! ATTCTTTGGAGTCACATTTC+CGG - chr7_3:4203768-4203787 None:intergenic 35.0%
!!! TCATTACCCTGAACCTTTTT+TGG + chr7_3:4203814-4203833 Msa1090310:intron 35.0%
!!! TGGTAAGTTATGGTTTTAGC+AGG + chr7_3:4203901-4203920 Msa1090310:intron 35.0%
GGTTCACATATCATGTTTCA+TGG - chr7_3:4204198-4204217 None:intergenic 35.0%
ACATGATATGTGACCCTATT+TGG + chr7_3:4204351-4204370 Msa1090310:intron 35.0%
! AAAATCTCATTTTCGCGACA+AGG - chr7_3:4204411-4204430 None:intergenic 35.0%
CAAATCATGTTTCGCATCAA+GGG - chr7_3:4204621-4204640 None:intergenic 35.0%
ACAAATCATGTTTCGCATCA+AGG - chr7_3:4204622-4204641 None:intergenic 35.0%
TGCCGAATACAAAACCAAAT+AGG - chr7_3:4204790-4204809 None:intergenic 35.0%
! AAATCTCGTTTTCGCGATAA+GGG - chr7_3:4204982-4205001 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG - chr7_3:4204983-4205002 None:intergenic 35.0%
CAAATCATGTTTCGCATCAA+GGG - chr7_3:4204621-4204640 None:intergenic 35.0%
ACAAATCATGTTTCGCATCA+AGG - chr7_3:4204622-4204641 None:intergenic 35.0%
TGCCGAATACAAAACCAAAT+AGG - chr7_3:4204790-4204809 None:intergenic 35.0%
! AAATCTCGTTTTCGCGATAA+GGG - chr7_3:4204982-4205001 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG - chr7_3:4204983-4205002 None:intergenic 35.0%
ACATGAGATGTGAACCTATT+TGG + chr7_3:4206166-4206185 Msa1090310:intron 35.0%
! AAATCTCGTTTTCGCGATAA+GGG - chr7_3:4204982-4205001 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG - chr7_3:4204983-4205002 None:intergenic 35.0%
CATATCATGTTTCGCATCAA+GGG - chr7_3:4205204-4205223 None:intergenic 35.0%
! AGTATTGAAATGACCCTTGT+CGG + chr7_3:4205115-4205134 Msa1090310:intron 35.0%
TATCAAACTTGCAACCACAT+AGG - chr7_3:4206699-4206718 None:intergenic 35.0%
GTGGTTGCAAGTTTGATAAA+TGG + chr7_3:4206701-4206720 Msa1090310:intron 35.0%
!! TTTCACATAAAGGTACCTGA+GGG - chr7_3:4206731-4206750 None:intergenic 35.0%
!! ATTTCACATAAAGGTACCTG+AGG - chr7_3:4206732-4206751 None:intergenic 35.0%
! AGCCAAGTTTGTTTGGATTT+CGG + chr7_3:4206937-4206956 Msa1090310:intron 35.0%
TACCGAAATCCAAACAAACT+TGG - chr7_3:4206942-4206961 None:intergenic 35.0%
TTGTTTGGATTTCGGTAAAC+TGG + chr7_3:4206945-4206964 Msa1090310:intron 35.0%
! AAATCCAATTTTCGCGTCAA+GGG - chr7_3:4207165-4207184 None:intergenic 35.0%
! AAAATCCAATTTTCGCGTCA+AGG - chr7_3:4207166-4207185 None:intergenic 35.0%
GTTCTCAAACTTCTAAACGA+GGG - chr7_3:4207313-4207332 None:intergenic 35.0%
GTTTAGAAGTTTGAGAACGA+AGG + chr7_3:4207315-4207334 Msa1090310:intron 35.0%
TTTCCAAACAAGGGTCATTA+AGG - chr7_3:4207424-4207443 None:intergenic 35.0%
! AATGACCCTTGTTTGGAAAA+TGG + chr7_3:4207425-4207444 Msa1090310:intron 35.0%
! TCGATCCATTTTCCAAACAA+GGG - chr7_3:4207433-4207452 None:intergenic 35.0%
! ATCGATCCATTTTCCAAACA+AGG - chr7_3:4207434-4207453 None:intergenic 35.0%
TTTGGAAAATGGATCGATAG+TGG + chr7_3:4207436-4207455 Msa1090310:intron 35.0%
ATCAAAATACAACAGCCTAC+AGG - chr7_3:4207480-4207499 None:intergenic 35.0%
TTCACATACGACAACAAACA+TGG + chr7_3:4207635-4207654 Msa1090310:intron 35.0%
! AACTTTATCTGCGACTGTTT+TGG + chr7_3:4207673-4207692 Msa1090310:three_prime_UTR 35.0%
TACAATTCGCCAACTTTCAT+TGG + chr7_3:4207718-4207737 Msa1090310:three_prime_UTR 35.0%
ACAATTCGCCAACTTTCATT+GGG + chr7_3:4207719-4207738 Msa1090310:three_prime_UTR 35.0%
! TACCTACCCTTTTAGATACA+AGG - chr7_3:4207748-4207767 None:intergenic 35.0%
AACCGTGAGTGTAACTAAAT+AGG - chr7_3:4207866-4207885 None:intergenic 35.0%
AAGAAAATACTTTGCTGCAG+AGG - chr7_3:4208518-4208537 None:intergenic 35.0%
TCATCTGAATCCAACAATGT+AGG + chr7_3:4208552-4208571 Msa1090310:three_prime_UTR 35.0%
TAGGAAGACAATGCATCAAA+TGG + chr7_3:4208571-4208590 Msa1090310:three_prime_UTR 35.0%
AGGAAGACAATGCATCAAAT+GGG + chr7_3:4208572-4208591 Msa1090310:three_prime_UTR 35.0%
TGAACATGAAGTGTGAGAGA+TGG - chr7_3:4192775-4192794 None:intergenic 40.0%
! AGAATCGATTCTCAGAAGCT+AGG + chr7_3:4192940-4192959 Msa1090310:intron 40.0%
ACTCAATTCTACCAAAAGCC+AGG - chr7_3:4192969-4192988 None:intergenic 40.0%
TTGGTAGAATTGAGTTTGGG+AGG + chr7_3:4192974-4192993 Msa1090310:intron 40.0%
!!! TGGCTGTGATTTGTTTTTGC+AGG + chr7_3:4193627-4193646 Msa1090310:intron 40.0%
!! GCAGGTTTAAATGGTTTGCT+TGG + chr7_3:4193645-4193664 Msa1090310:intron 40.0%
TACTGCATCAGACATATCAC+AGG - chr7_3:4193813-4193832 None:intergenic 40.0%
! ATGTTGCTCTCCTTGTGTTT+TGG + chr7_3:4193985-4194004 Msa1090310:intron 40.0%
ATCTGATGCATTGTCTTGCA+TGG + chr7_3:4194130-4194149 Msa1090310:intron 40.0%
CTACATGGTGATAATCAGGA+TGG + chr7_3:4194367-4194386 Msa1090310:CDS 40.0%
! GAAGCATTTCAGAAGAGTTC+AGG + chr7_3:4194464-4194483 Msa1090310:three_prime_UTR 40.0%
TCACCTGCATATTAGAGGTT+AGG + chr7_3:4194730-4194749 Msa1090310:intron 40.0%
CAGACTTGAAGGGATCAAAT+TGG + chr7_3:4194883-4194902 Msa1090310:intron 40.0%
TCACATGCAAGCTACACATA+TGG - chr7_3:4194987-4195006 None:intergenic 40.0%
AAGTTCAAAGAAGCTCTTCC+AGG + chr7_3:4195088-4195107 Msa1090310:intron 40.0%
TGTTGCATTTAAGCTACACC+TGG - chr7_3:4195109-4195128 None:intergenic 40.0%
ACTTGATTCAAGACCATGCT+TGG + chr7_3:4195128-4195147 Msa1090310:intron 40.0%
CCTGAAATCTTAACCAAGCA+TGG - chr7_3:4195144-4195163 None:intergenic 40.0%
CCATGCTTGGTTAAGATTTC+AGG + chr7_3:4195141-4195160 Msa1090310:intron 40.0%
TGAGTGTATTGAGTTCCGAT+TGG - chr7_3:4195391-4195410 None:intergenic 40.0%
CGGAACTCAATACACTCAAA+CGG + chr7_3:4195393-4195412 Msa1090310:intron 40.0%
!! GGCGTTTTATGGTGTTTTTG+GGG + chr7_3:4196161-4196180 Msa1090310:intron 40.0%
!!! TGCCCAGTTTTGGTGTTTTT+AGG + chr7_3:4196229-4196248 Msa1090310:intron 40.0%
CTGCCTAAAAACACCAAAAC+TGG - chr7_3:4196235-4196254 None:intergenic 40.0%
TAAAAGCAGATGGAAAGGAG+AGG - chr7_3:4197000-4197019 None:intergenic 40.0%
!! GGGTTTTATAGAGGAGATGA+AGG - chr7_3:4197145-4197164 None:intergenic 40.0%
! CCGATTGTGATTTTTCTCTG+AGG - chr7_3:4197166-4197185 None:intergenic 40.0%
GCGGATCTGAAAGAAAATAG+AGG - chr7_3:4197457-4197476 None:intergenic 40.0%
AACGTTGCCTGAAACTACAA+TGG + chr7_3:4198111-4198130 Msa1090310:three_prime_UTR 40.0%
AGCATCCAATAGATTCGTGT+AGG + chr7_3:4198408-4198427 Msa1090310:intron 40.0%
TTGTGTGCAGGAATCTCAAA+AGG + chr7_3:4198697-4198716 Msa1090310:intron 40.0%
TGTGTGCAGGAATCTCAAAA+GGG + chr7_3:4198698-4198717 Msa1090310:intron 40.0%
GTGGACAAAGGGTAAACATA+TGG - chr7_3:4198975-4198994 None:intergenic 40.0%
AGTCAGTAGAAGTGGACAAA+GGG - chr7_3:4198986-4199005 None:intergenic 40.0%
TAGTCAGTAGAAGTGGACAA+AGG - chr7_3:4198987-4199006 None:intergenic 40.0%
GCAATAGTAGTCAGTAGAAG+TGG - chr7_3:4198994-4199013 None:intergenic 40.0%
! GTTCTAAACTACTTGGGGTA+AGG + chr7_3:4199655-4199674 Msa1090310:intron 40.0%
TTCCAACTGCGAAAATGAAG+AGG + chr7_3:4200050-4200069 Msa1090310:intron 40.0%
! ATCCTCTTCATTTTCGCAGT+TGG - chr7_3:4200055-4200074 None:intergenic 40.0%
CTACAACAACATCACAACAC+TGG - chr7_3:4200271-4200290 None:intergenic 40.0%
GTCTCTGTATTAGAAAGCCA+TGG - chr7_3:4200490-4200509 None:intergenic 40.0%
GAAAGGAAAATGAGTCCAAG+AGG - chr7_3:4200589-4200608 None:intergenic 40.0%
ACGGGACAATCATTGAAAGT+AGG + chr7_3:4200662-4200681 Msa1090310:intron 40.0%
CGGGACAATCATTGAAAGTA+GGG + chr7_3:4200663-4200682 Msa1090310:intron 40.0%
GGGACAATCATTGAAAGTAG+GGG + chr7_3:4200664-4200683 Msa1090310:intron 40.0%
CGATCCATATTTGCTCATTG+TGG - chr7_3:4200741-4200760 None:intergenic 40.0%
TTTGTTTAGGGGATATGTGG+GGG + chr7_3:4200771-4200790 Msa1090310:intron 40.0%
TTGGAAGGATAGGAAGATGA+AGG + chr7_3:4200857-4200876 Msa1090310:intron 40.0%
TGGAAGGATAGGAAGATGAA+GGG + chr7_3:4200858-4200877 Msa1090310:intron 40.0%
TGAGACTCTCCTCCAATATT+GGG + chr7_3:4200914-4200933 Msa1090310:intron 40.0%
ACACAACACACATTTCTCCT+TGG - chr7_3:4201015-4201034 None:intergenic 40.0%
GTCTGATCTTCCTTTCATTG+AGG + chr7_3:4201033-4201052 Msa1090310:intron 40.0%
CAACTTCACTAACTACACCA+TGG - chr7_3:4201085-4201104 None:intergenic 40.0%
GTGTAGTTAGTGAAGTTGCA+TGG + chr7_3:4201087-4201106 Msa1090310:intron 40.0%
!! CTTGATTTGTGCAGGGTAAA+TGG + chr7_3:4201123-4201142 Msa1090310:intron 40.0%
TGTATGTTTGGGTGAGTGTT+TGG + chr7_3:4201207-4201226 Msa1090310:intron 40.0%
!! CTATTTCTATAGCAGCGAAC+AGG + chr7_3:4201636-4201655 Msa1090310:intron 40.0%
GAACGAAGGATAGATCTTCA+AGG - chr7_3:4201825-4201844 None:intergenic 40.0%
ACCTTATTGCAAGAGAGTAG+AGG + chr7_3:4202362-4202381 Msa1090310:intron 40.0%
ACCTCTACTCTCTTGCAATA+AGG - chr7_3:4202366-4202385 None:intergenic 40.0%
GGCAATTCGATGATTTCAGT+CGG + chr7_3:4202589-4202608 Msa1090310:three_prime_UTR 40.0%
GCAATTCGATGATTTCAGTC+GGG + chr7_3:4202590-4202609 Msa1090310:three_prime_UTR 40.0%
AACTTCCTTGTTGCTGAATC+GGG - chr7_3:4202655-4202674 None:intergenic 40.0%
GAACTTCCTTGTTGCTGAAT+CGG - chr7_3:4202656-4202675 None:intergenic 40.0%
! TTCTGGCTGAAAGTTCTACA+AGG + chr7_3:4202776-4202795 Msa1090310:three_prime_UTR 40.0%
GAAAGTTCTACAAGGCAACT+TGG + chr7_3:4202784-4202803 Msa1090310:three_prime_UTR 40.0%
AAGTTCTACAAGGCAACTTG+GGG + chr7_3:4202786-4202805 Msa1090310:three_prime_UTR 40.0%
TGGGGATAACATTGGTCAAA+AGG + chr7_3:4202804-4202823 Msa1090310:three_prime_UTR 40.0%
TATGTATAACAGTCGTGCAC+AGG + chr7_3:4202832-4202851 Msa1090310:three_prime_UTR 40.0%
!!! CCTGATGGTTGTTTTAATCC+AGG - chr7_3:4202996-4203015 None:intergenic 40.0%
CCTGGATTAAAACAACCATC+AGG + chr7_3:4202993-4203012 Msa1090310:three_prime_UTR 40.0%
GTGTGTGGCTTCATCTAAAA+TGG + chr7_3:4203016-4203035 Msa1090310:three_prime_UTR 40.0%
! GTTGAAGCATTCACCAATTG+TGG - chr7_3:4203120-4203139 None:intergenic 40.0%
CAATTGGTGAATGCTTCAAC+AGG + chr7_3:4203120-4203139 Msa1090310:three_prime_UTR 40.0%
AAACTTGACACTGATGCATC+TGG - chr7_3:4203258-4203277 None:intergenic 40.0%
GATAAGTTGTCAATCGGAAG+TGG + chr7_3:4203389-4203408 Msa1090310:three_prime_UTR 40.0%
! TTCTCATTTTCTGACTTCCC+TGG + chr7_3:4203463-4203482 Msa1090310:intron 40.0%
! TCTCATTTTCTGACTTCCCT+GGG + chr7_3:4203464-4203483 Msa1090310:intron 40.0%
TGTCTTACATGTGGCAATGT+AGG + chr7_3:4203594-4203613 Msa1090310:three_prime_UTR 40.0%
GCTAGTCCAAAAAAGGTTCA+GGG - chr7_3:4203823-4203842 None:intergenic 40.0%
AGAAGATGCATCAGAAACAC+AGG - chr7_3:4204098-4204117 None:intergenic 40.0%
TTCGCATTAAGGGACATCAA+GGG - chr7_3:4204331-4204350 None:intergenic 40.0%
TTTCGCATTAAGGGACATCA+AGG - chr7_3:4204332-4204351 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG - chr7_3:4204902-4204921 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG - chr7_3:4204903-4204922 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG - chr7_3:4204902-4204921 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG - chr7_3:4204903-4204922 None:intergenic 40.0%
TAAACAGTGAACTTGTCCCT+CGG + chr7_3:4204592-4204611 Msa1090310:intron 40.0%
CATCTCATGTTTCGCATCAA+GGG - chr7_3:4206156-4206175 None:intergenic 40.0%
ACATCTCATGTTTCGCATCA+AGG - chr7_3:4206157-4206176 None:intergenic 40.0%
TGCCGAATACCAAACCAAAT+AGG - chr7_3:4206325-4206344 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG - chr7_3:4204902-4204921 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG - chr7_3:4204903-4204922 None:intergenic 40.0%
CCATATCATGTTTCGCATCA+AGG - chr7_3:4206605-4206624 None:intergenic 40.0%
CCTTGATGCGAAACATGATA+TGG + chr7_3:4206602-4206621 Msa1090310:intron 40.0%
AAACTGGATGCAAGAGATTG+TGG + chr7_3:4206961-4206980 Msa1090310:intron 40.0%
! ATTTTCGCGACAACTGTCAT+CGG - chr7_3:4207065-4207084 None:intergenic 40.0%
CTTCTAAACGAGGGTCATAA+AGG - chr7_3:4207304-4207323 None:intergenic 40.0%
CGTTCTCAAACTTCTAAACG+AGG - chr7_3:4207314-4207333 None:intergenic 40.0%
AATATTTGACGCTTGCCTGT+AGG + chr7_3:4207462-4207481 Msa1090310:intron 40.0%
!!! GTTTTGGAAGAGACACTCAA+TGG + chr7_3:4207689-4207708 Msa1090310:three_prime_UTR 40.0%
TGGGACACCTTGTATCTAAA+AGG + chr7_3:4207738-4207757 Msa1090310:three_prime_UTR 40.0%
GGGACACCTTGTATCTAAAA+GGG + chr7_3:4207739-4207758 Msa1090310:three_prime_UTR 40.0%
CACCTTGTATCTAAAAGGGT+AGG + chr7_3:4207743-4207762 Msa1090310:intron 40.0%
CACGGTTATAGTCACATAAG+AGG + chr7_3:4207879-4207898 Msa1090310:three_prime_UTR 40.0%
AGGACAAAATGATGTACACC+TGG - chr7_3:4208306-4208325 None:intergenic 40.0%
! GGTGTACATCATTTTGTCCT+CGG + chr7_3:4208306-4208325 Msa1090310:intron 40.0%
GCATTGTCTTCCTACATTGT+TGG - chr7_3:4208565-4208584 None:intergenic 40.0%
! AAATCGCATTTTCGCGACAA+GGG - chr7_3:4208862-4208881 None:intergenic 40.0%
! AAAATCGCATTTTCGCGACA+AGG - chr7_3:4208863-4208882 None:intergenic 40.0%
AGGAGGAATGAAGGGTAGTA+GGG - chr7_3:4192705-4192724 None:intergenic 45.0%
AAGGAGGAATGAAGGGTAGT+AGG - chr7_3:4192706-4192725 None:intergenic 45.0%
AGCGCTAAATCTGGGTGATT+TGG + chr7_3:4192819-4192838 Msa1090310:CDS 45.0%
TTCTCAGAAGCTAGGATTCC+TGG + chr7_3:4192948-4192967 Msa1090310:intron 45.0%
!! AAGCTAGGATTCCTGGCTTT+TGG + chr7_3:4192955-4192974 Msa1090310:intron 45.0%
TCCTAGGGTTTGCAAGAACT+CGG + chr7_3:4193101-4193120 Msa1090310:CDS 45.0%
!! TTGGCCTTTGCACAAGCTTT+TGG + chr7_3:4193603-4193622 Msa1090310:intron 45.0%
! TGGCCTTTGCACAAGCTTTT+GGG + chr7_3:4193604-4193623 Msa1090310:intron 45.0%
! GGTGCTACATGGTGATAATC+AGG + chr7_3:4194363-4194382 Msa1090310:CDS 45.0%
CCTCCTAACCTCTAATATGC+AGG - chr7_3:4194736-4194755 None:intergenic 45.0%
CCTGCATATTAGAGGTTAGG+AGG + chr7_3:4194733-4194752 Msa1090310:intron 45.0%
TCCGTTGTCTTCAGACTTGA+AGG + chr7_3:4194872-4194891 Msa1090310:intron 45.0%
CCCTTCAAGTCTGAAGACAA+CGG - chr7_3:4194876-4194895 None:intergenic 45.0%
CCGTTGTCTTCAGACTTGAA+GGG + chr7_3:4194873-4194892 Msa1090310:intron 45.0%
! TGTGTAGCTTGCATGTGACT+AGG + chr7_3:4194989-4195008 Msa1090310:intron 45.0%
! TTAGAGAGTGTGTGAGAGCT+AGG - chr7_3:4195309-4195328 None:intergenic 45.0%
!! CCTAACCTAGCTTTGAATCG+CGG + chr7_3:4195355-4195374 Msa1090310:intron 45.0%
TTGAACCGCGATTCAAAGCT+AGG - chr7_3:4195363-4195382 None:intergenic 45.0%
! GCTTTGAATCGCGGTTCAAT+CGG + chr7_3:4195364-4195383 Msa1090310:intron 45.0%
ACACTCAAACGGTGCTCAAA+TGG + chr7_3:4195404-4195423 Msa1090310:intron 45.0%
CAAGCCAAGCATGTAAGATG+AGG + chr7_3:4195893-4195912 Msa1090310:intron 45.0%
GTGATCTTCTAGCCAAGACT+TGG - chr7_3:4196414-4196433 None:intergenic 45.0%
ACAACCATCATCTTCTCCCT+TGG + chr7_3:4197066-4197085 Msa1090310:intron 45.0%
AGATCCAAGGGAGAAGATGA+TGG - chr7_3:4197073-4197092 None:intergenic 45.0%
TCATCTTCTCCCTTGGATCT+CGG + chr7_3:4197073-4197092 Msa1090310:intron 45.0%
! GATGAAGGGGAGTCTTTTTC+AGG - chr7_3:4197130-4197149 None:intergenic 45.0%
!! TGGAAGTGTCATTTCCGGTA+CGG - chr7_3:4197228-4197247 None:intergenic 45.0%
ACAACGTTATTCTGTCACGG+TGG - chr7_3:4197248-4197267 None:intergenic 45.0%
TCCGCAAAAAGCTTCGCTTT+CGG + chr7_3:4197478-4197497 Msa1090310:three_prime_UTR 45.0%
! ACCGAAAGCGAAGCTTTTTG+CGG - chr7_3:4197482-4197501 None:intergenic 45.0%
! GTCACTTTCAAGCTCAACCA+TGG + chr7_3:4197500-4197519 Msa1090310:three_prime_UTR 45.0%
AGCTCAACCATGGAGTTTAG+CGG + chr7_3:4197510-4197529 Msa1090310:three_prime_UTR 45.0%
! CGCCTTATTCACATCCACAA+GGG + chr7_3:4197604-4197623 Msa1090310:intron 45.0%
GACCCTTGTGGATGTGAATA+AGG - chr7_3:4197609-4197628 None:intergenic 45.0%
! GTTGTTGTTGCTGCATGTGT+GGG - chr7_3:4197631-4197650 None:intergenic 45.0%
! TGTTGTTGTTGCTGCATGTG+TGG - chr7_3:4197632-4197651 None:intergenic 45.0%
ATCTGATTCAAGCTGCAGAG+TGG - chr7_3:4198761-4198780 None:intergenic 45.0%
CTTAATGAAGAGGCGAGTGT+AGG - chr7_3:4199969-4199988 None:intergenic 45.0%
GGATAGGAAGATGAAGGGAT+TGG + chr7_3:4200863-4200882 Msa1090310:intron 45.0%
TAGGAAGATGAAGGGATTGG+AGG + chr7_3:4200866-4200885 Msa1090310:intron 45.0%
AGGAAGATGAAGGGATTGGA+GGG + chr7_3:4200867-4200886 Msa1090310:intron 45.0%
GTGAGACTCTCCTCCAATAT+TGG + chr7_3:4200913-4200932 Msa1090310:intron 45.0%
AGGGAGAGAACCTCAATGAA+AGG - chr7_3:4201046-4201065 None:intergenic 45.0%
GTGCAGGGTAAATGGGAAAA+TGG + chr7_3:4201131-4201150 Msa1090310:intron 45.0%
TGGCCTGCTTTGTGTATGTT+TGG + chr7_3:4201195-4201214 Msa1090310:intron 45.0%
GGCCTGCTTTGTGTATGTTT+GGG + chr7_3:4201196-4201215 Msa1090310:intron 45.0%
CACCCAAACATACACAAAGC+AGG - chr7_3:4201201-4201220 None:intergenic 45.0%
TAATTCTCTCGGAGAGACTC+AGG + chr7_3:4201555-4201574 Msa1090310:intron 45.0%
GACCCATGAAGTACAAACAC+CGG + chr7_3:4201663-4201682 Msa1090310:intron 45.0%
GTCCGGTGTTTGTACTTCAT+GGG - chr7_3:4201668-4201687 None:intergenic 45.0%
TGTCCGGTGTTTGTACTTCA+TGG - chr7_3:4201669-4201688 None:intergenic 45.0%
CACCGGACATGACACTAATA+TGG + chr7_3:4201680-4201699 Msa1090310:intron 45.0%
!!! TTATTTTGGGGACCAACCTG+AGG + chr7_3:4202156-4202175 Msa1090310:intron 45.0%
TCGGGAACCATTGAACTACA+AGG + chr7_3:4202608-4202627 Msa1090310:three_prime_UTR 45.0%
ACTTCCTTGTTGCTGAATCG+GGG - chr7_3:4202654-4202673 None:intergenic 45.0%
AACAAGGAAGTTCCAGCTGT+AGG + chr7_3:4202663-4202682 Msa1090310:three_prime_UTR 45.0%
AGGCAACTTGGGGATAACAT+TGG + chr7_3:4202796-4202815 Msa1090310:three_prime_UTR 45.0%
ATGGTTCCAAGCGTGACATT+AGG + chr7_3:4202858-4202877 Msa1090310:three_prime_UTR 45.0%
TGGTTCCAAGCGTGACATTA+GGG + chr7_3:4202859-4202878 Msa1090310:three_prime_UTR 45.0%
AAAACAACCATCAGGGTGTG+TGG + chr7_3:4203001-4203020 Msa1090310:three_prime_UTR 45.0%
ATGGCATCAATCCCTGTTGA+AGG + chr7_3:4203035-4203054 Msa1090310:three_prime_UTR 45.0%
TCTAATATGACAGACCCTGC+TGG + chr7_3:4203144-4203163 Msa1090310:three_prime_UTR 45.0%
TTGTCAATCGGAAGTGGAGA+TGG + chr7_3:4203395-4203414 Msa1090310:three_prime_UTR 45.0%
CAACTTAGCTGTCTCTGACT+CGG - chr7_3:4203433-4203452 None:intergenic 45.0%
!! TGTAGGCTTTGAAGAGACGT+TGG + chr7_3:4203611-4203630 Msa1090310:three_prime_UTR 45.0%
GTAAAGCTTGTGCACTGCAT+AGG + chr7_3:4203649-4203668 Msa1090310:three_prime_UTR 45.0%
! GGCTAGTCCAAAAAAGGTTC+AGG - chr7_3:4203824-4203843 None:intergenic 45.0%
!! AGATGGGGCTAGTCCAAAAA+AGG - chr7_3:4203830-4203849 None:intergenic 45.0%
TTCGTATCAAGGGAGATCGA+GGG - chr7_3:4204753-4204772 None:intergenic 45.0%
TTTCGTATCAAGGGAGATCG+AGG - chr7_3:4204754-4204773 None:intergenic 45.0%
TTCGCATCAAGAGACATCGA+GGG - chr7_3:4205194-4205213 None:intergenic 45.0%
TTTCGCATCAAGAGACATCG+AGG - chr7_3:4205195-4205214 None:intergenic 45.0%
TTCGTATCAAGGGAGATCGA+GGG - chr7_3:4204753-4204772 None:intergenic 45.0%
TTTCGTATCAAGGGAGATCG+AGG - chr7_3:4204754-4204773 None:intergenic 45.0%
TTCGCATCAAGAGACATCGA+GGG - chr7_3:4205194-4205213 None:intergenic 45.0%
TTTCGCATCAAGAGACATCG+AGG - chr7_3:4205195-4205214 None:intergenic 45.0%
TTCGTATCAAGCGAGATCGA+GGG - chr7_3:4206288-4206307 None:intergenic 45.0%
TTTCGTATCAAGCGAGATCG+AGG - chr7_3:4206289-4206308 None:intergenic 45.0%
TTGATAAATGGGAAGCCCTC+AGG + chr7_3:4206713-4206732 Msa1090310:intron 45.0%
TTTCGCATCAAGGGATATCG+AGG - chr7_3:4206906-4206925 None:intergenic 45.0%
ATGACCCTTGACGCGAAAAT+TGG + chr7_3:4207158-4207177 Msa1090310:intron 45.0%
! CAAGGTGTCCCAATGAAAGT+TGG - chr7_3:4207730-4207749 None:intergenic 45.0%
!! CTTTGCTGCTTTCATGTCAC+AGG + chr7_3:4207819-4207838 Msa1090310:intron 45.0%
ACATAAGAGGAAGCAAGAGC+TGG + chr7_3:4207892-4207911 Msa1090310:three_prime_UTR 45.0%
AGCACATTATGTTCACACCG+AGG - chr7_3:4208326-4208345 None:intergenic 45.0%
TATGCATCAAGGGACATCGA+CGG - chr7_3:4208783-4208802 None:intergenic 45.0%
!!! TTAAAAGTATATTAATTTTT+GGG + chr7_3:4196578-4196597 Msa1090310:intron 5.0%
!!! TTTTATTTTTGTTTTAATTA+AGG + chr7_3:4197358-4197377 Msa1090310:intron 5.0%
!! TTATTATAAAATTGTTAAAT+AGG + chr7_3:4207022-4207041 Msa1090310:intron 5.0%
!! TATTATAAAATTGTTAAATA+GGG + chr7_3:4207023-4207042 Msa1090310:intron 5.0%
! TTTGAAGCGCTAGACTCGCT+CGG - chr7_3:4193018-4193037 None:intergenic 50.0%
TCTTGAAATCTCAGCGCGCA+AGG + chr7_3:4193078-4193097 Msa1090310:CDS 50.0%
GGTTTGCAAGAACTCGGCTA+CGG + chr7_3:4193107-4193126 Msa1090310:CDS 50.0%
CCACCCAAAAGCTTGTGCAA+AGG - chr7_3:4193610-4193629 None:intergenic 50.0%
! CCTTTGCACAAGCTTTTGGG+TGG + chr7_3:4193607-4193626 Msa1090310:intron 50.0%
ACGACGCATACACAGATGCA+TGG + chr7_3:4193871-4193890 Msa1090310:intron 50.0%
AGCACCTTGAGCAAGACAAG+AGG + chr7_3:4194341-4194360 Msa1090310:CDS 50.0%
GCACCTTGAGCAAGACAAGA+GGG + chr7_3:4194342-4194361 Msa1090310:CDS 50.0%
!! CAAGACAAGAGGGTGCTACA+TGG + chr7_3:4194352-4194371 Msa1090310:CDS 50.0%
!! CCTGCTTTAAAGGAGAGCAG+TGG - chr7_3:4194495-4194514 None:intergenic 50.0%
!! CCACTGCTCTCCTTTAAAGC+AGG + chr7_3:4194492-4194511 Msa1090310:three_prime_UTR 50.0%
CACATATGGACTTCCCTGTC+TGG - chr7_3:4194973-4194992 None:intergenic 50.0%
GTGAGAGCTAGGTTAGGTTC+TGG - chr7_3:4195298-4195317 None:intergenic 50.0%
GAGTGTGTGAGAGCTAGGTT+AGG - chr7_3:4195304-4195323 None:intergenic 50.0%
CCGCGATTCAAAGCTAGGTT+AGG - chr7_3:4195358-4195377 None:intergenic 50.0%
GGTGTTCACCCAATCTGTTC+TGG + chr7_3:4195501-4195520 Msa1090310:intron 50.0%
! AGCTGTTCTGTGCCCAGTTT+TGG + chr7_3:4196219-4196238 Msa1090310:intron 50.0%
TTGTCTGTAATAGCCCCTGC+TGG + chr7_3:4196264-4196283 Msa1090310:intron 50.0%
TGTCTGTAATAGCCCCTGCT+GGG + chr7_3:4196265-4196284 Msa1090310:intron 50.0%
ACCAAAAACACCTACTGCCC+TGG - chr7_3:4196306-4196325 None:intergenic 50.0%
!!! AGGGCAGTAGGTGTTTTTGG+TGG + chr7_3:4196305-4196324 Msa1090310:intron 50.0%
TAGCTCCTGCAACCAAGTCT+TGG + chr7_3:4196399-4196418 Msa1090310:intron 50.0%
! TCTAGCCAAGACTTGGTTGC+AGG - chr7_3:4196407-4196426 None:intergenic 50.0%
AGGTAGCCGTGAACAGTGTA+CGG - chr7_3:4196930-4196949 None:intergenic 50.0%
AAGGCGGTCGGAAACATATG+AGG - chr7_3:4196950-4196969 None:intergenic 50.0%
CATATGTTTCCGACCGCCTT+TGG + chr7_3:4196950-4196969 Msa1090310:intron 50.0%
! GATGATGGCACAACCAAAGG+CGG - chr7_3:4196966-4196985 None:intergenic 50.0%
!! GGTGATGATGGCACAACCAA+AGG - chr7_3:4196969-4196988 None:intergenic 50.0%
TGGAAAGGAGAGGATGACGA+CGG - chr7_3:4196990-4197009 None:intergenic 50.0%
!! TTTTCTGGTGACCACCGTTC+CGG + chr7_3:4197190-4197209 Msa1090310:intron 50.0%
!! CACGGTGGAAGTGTCATTTC+CGG - chr7_3:4197233-4197252 None:intergenic 50.0%
! GAAAGCGAAGCTTTTTGCGG+AGG - chr7_3:4197479-4197498 None:intergenic 50.0%
AGATCTGCCGCTAAACTCCA+TGG - chr7_3:4197520-4197539 None:intergenic 50.0%
! GCGCCTTATTCACATCCACA+AGG + chr7_3:4197603-4197622 Msa1090310:intron 50.0%
!! TGTCTTCGTGCTGTTTGTCC+TGG - chr7_3:4198871-4198890 None:intergenic 50.0%
TTAGGGGATATGTGGGGGAT+AGG + chr7_3:4200776-4200795 Msa1090310:intron 50.0%
GGATATGTGGGGGATAGGAT+GGG + chr7_3:4200781-4200800 Msa1090310:intron 50.0%
GATATGTGGGGGATAGGATG+GGG + chr7_3:4200782-4200801 Msa1090310:intron 50.0%
ATATGTGGGGGATAGGATGG+GGG + chr7_3:4200783-4200802 Msa1090310:intron 50.0%
GGAAGATGAAGGGATTGGAG+GGG + chr7_3:4200868-4200887 Msa1090310:intron 50.0%
! TGGAGATTATGCTGGTGCCA+AGG + chr7_3:4202702-4202721 Msa1090310:three_prime_UTR 50.0%
AACAGTCGTGCACAGGATGA+TGG + chr7_3:4202839-4202858 Msa1090310:three_prime_UTR 50.0%
GGTTCCAAGCGTGACATTAG+GGG + chr7_3:4202860-4202879 Msa1090310:three_prime_UTR 50.0%
CTTGACACTGATGCATCTGG+CGG - chr7_3:4203255-4203274 None:intergenic 50.0%
ACTGGAGCTTCCGATACTTG+AGG - chr7_3:4203321-4203340 None:intergenic 50.0%
!! TCAAGTATCGGAAGCTCCAG+TGG + chr7_3:4203320-4203339 Msa1090310:three_prime_UTR 50.0%
!! GCAAGAGCATCAATCTCCAC+TGG - chr7_3:4203339-4203358 None:intergenic 50.0%
GGAGATTGATGCTCTTGCAG+AGG + chr7_3:4203341-4203360 Msa1090310:three_prime_UTR 50.0%
AGAGACAGCTAAGTTGCCTC+AGG + chr7_3:4203437-4203456 Msa1090310:three_prime_UTR 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4204611-4204630 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4204612-4204631 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4204611-4204630 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4204612-4204631 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4204611-4204630 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4204612-4204631 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4204611-4204630 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4204612-4204631 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4204611-4204630 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4204612-4204631 None:intergenic 50.0%
GCGCCTTAATGACCCTTGTT+TGG + chr7_3:4207418-4207437 Msa1090310:intron 50.0%
GCCGAGTTCTTGCAAACCCT+AGG - chr7_3:4193105-4193124 None:intergenic 55.0%
TTGCAAGAACTCGGCTACGG+CGG + chr7_3:4193110-4193129 Msa1090310:CDS 55.0%
GCACCCTCTTGTCTTGCTCA+AGG - chr7_3:4194348-4194367 None:intergenic 55.0%
CGCGGTTCAATCGGTCCAAT+CGG + chr7_3:4195373-4195392 Msa1090310:intron 55.0%
!!! GGTGTTTTTGGGGCTGTTGC+TGG + chr7_3:4196171-4196190 Msa1090310:intron 55.0%
AGCTAAAACAGCGCCCAGCA+GGG - chr7_3:4196281-4196300 None:intergenic 55.0%
!! TTTTAGCTGGCCAGGGCAGT+AGG + chr7_3:4196293-4196312 Msa1090310:intron 55.0%
! GCCAGGGCAGTAGGTGTTTT+TGG + chr7_3:4196302-4196321 Msa1090310:intron 55.0%
!! CGGCTAGGGTTTGTTACAGG+GGG - chr7_3:4196907-4196926 None:intergenic 55.0%
!! GCGGCTAGGGTTTGTTACAG+GGG - chr7_3:4196908-4196927 None:intergenic 55.0%
!! GGCGGCTAGGGTTTGTTACA+GGG - chr7_3:4196909-4196928 None:intergenic 55.0%
TGAACAGTGTACGGCGGCTA+GGG - chr7_3:4196921-4196940 None:intergenic 55.0%
TAGCCGCCGTACACTGTTCA+CGG + chr7_3:4196921-4196940 Msa1090310:intron 55.0%
TAGCCGTGAACAGTGTACGG+CGG - chr7_3:4196927-4196946 None:intergenic 55.0%
ATGGCACAACCAAAGGCGGT+CGG - chr7_3:4196962-4196981 None:intergenic 55.0%
GAGGATGACGACGGTGATGA+TGG - chr7_3:4196981-4197000 None:intergenic 55.0%
CTACGATGGCCGAGATCCAA+GGG - chr7_3:4197085-4197104 None:intergenic 55.0%
TCTACGATGGCCGAGATCCA+AGG - chr7_3:4197086-4197105 None:intergenic 55.0%
GATGGTGATTTCCGGAACGG+TGG - chr7_3:4197204-4197223 None:intergenic 55.0%
GGCGATGGTGATTTCCGGAA+CGG - chr7_3:4197207-4197226 None:intergenic 55.0%
GGTACGGCGATGGTGATTTC+CGG - chr7_3:4197212-4197231 None:intergenic 55.0%
GGAAATCACCATCGCCGTAC+CGG + chr7_3:4197211-4197230 Msa1090310:intron 55.0%
! TGTCATTTCCGGTACGGCGA+TGG - chr7_3:4197222-4197241 None:intergenic 55.0%
! AGCGAAGCTTTTTGCGGAGG+CGG - chr7_3:4197476-4197495 None:intergenic 55.0%
GGGATATGTGGGGGATAGGA+TGG + chr7_3:4200780-4200799 Msa1090310:intron 55.0%
TGGGGGAGAGAGTGGATGAA+AGG + chr7_3:4200800-4200819 Msa1090310:intron 55.0%
AGCTCCCCGATTCAGCAACA+AGG + chr7_3:4202647-4202666 Msa1090310:three_prime_UTR 55.0%
! TATGCTGGTGCCAAGGATCG+CGG + chr7_3:4202709-4202728 Msa1090310:three_prime_UTR 55.0%
TGCCAAGGATCGCGGTTTCA+AGG + chr7_3:4202717-4202736 Msa1090310:three_prime_UTR 55.0%
CACCTTGAAACCGCGATCCT+TGG - chr7_3:4202722-4202741 None:intergenic 55.0%
CAAGGATCGCGGTTTCAAGG+TGG + chr7_3:4202720-4202739 Msa1090310:three_prime_UTR 55.0%
GATGAAGCCACACACCCTGA+TGG - chr7_3:4203011-4203030 None:intergenic 55.0%
TTCGCATCAAGGGACACCGA+GGG - chr7_3:4206146-4206165 None:intergenic 55.0%
TTTCGCATCAAGGGACACCG+AGG - chr7_3:4206147-4206166 None:intergenic 55.0%
ATCTCAGCGCGCAAGGTCCT+AGG + chr7_3:4193085-4193104 Msa1090310:CDS 60.0%
TCTCAGCGCGCAAGGTCCTA+GGG + chr7_3:4193086-4193105 Msa1090310:CDS 60.0%
TGCAAGAACTCGGCTACGGC+GGG + chr7_3:4193111-4193130 Msa1090310:CDS 60.0%
GCTAAAACAGCGCCCAGCAG+GGG - chr7_3:4196280-4196299 None:intergenic 60.0%
CAGCTAAAACAGCGCCCAGC+AGG - chr7_3:4196282-4196301 None:intergenic 60.0%
!!! CTGCTGGGCGCTGTTTTAGC+TGG + chr7_3:4196280-4196299 Msa1090310:intron 60.0%
!!! GGCGCTGTTTTAGCTGGCCA+GGG + chr7_3:4196286-4196305 Msa1090310:intron 60.0%
!! CGGCGGCTAGGGTTTGTTAC+AGG - chr7_3:4196910-4196929 None:intergenic 60.0%
GTGAACAGTGTACGGCGGCT+AGG - chr7_3:4196922-4196941 None:intergenic 60.0%
CTGCATGTGTGGGACCCTTG+TGG - chr7_3:4197621-4197640 None:intergenic 60.0%
GGATAGGATGGGGGAGAGAG+TGG + chr7_3:4200792-4200811 Msa1090310:intron 60.0%
GGCTCCCCTAATGTCACGCT+TGG - chr7_3:4202867-4202886 None:intergenic 60.0%
CACTGATGCATCTGGCGGTG+CGG - chr7_3:4203250-4203269 None:intergenic 60.0%
!!! GGGCGCTGTTTTAGCTGGCC+AGG + chr7_3:4196285-4196304 Msa1090310:intron 65.0%
TCTGGCGGTGCGGATGCAAG+TGG - chr7_3:4203240-4203259 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 4192622 4208991 4192622 ID=Msa1090310;Name=Msa1090310
chr7_3 mRNA 4192622 4208991 4192622 ID=Msa1090310-mRNA-1;Parent=Msa1090310;Name=Msa1090310-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|0.76|0.78|1|0.30|0.35|14|2446|210
chr7_3 exon 4192622 4192850 4192622 ID=Msa1090310-mRNA-1:exon:1569;Parent=Msa1090310-mRNA-1
chr7_3 exon 4192981 4193140 4192981 ID=Msa1090310-mRNA-1:exon:1570;Parent=Msa1090310-mRNA-1
chr7_3 exon 4193778 4193829 4193778 ID=Msa1090310-mRNA-1:exon:1571;Parent=Msa1090310-mRNA-1
chr7_3 exon 4194265 4194513 4194265 ID=Msa1090310-mRNA-1:exon:1572;Parent=Msa1090310-mRNA-1
chr7_3 exon 4197471 4197553 4197471 ID=Msa1090310-mRNA-1:exon:1573;Parent=Msa1090310-mRNA-1
chr7_3 exon 4198070 4198199 4198070 ID=Msa1090310-mRNA-1:exon:1574;Parent=Msa1090310-mRNA-1
chr7_3 exon 4198707 4198791 4198707 ID=Msa1090310-mRNA-1:exon:1575;Parent=Msa1090310-mRNA-1
chr7_3 exon 4198872 4198949 4198872 ID=Msa1090310-mRNA-1:exon:1576;Parent=Msa1090310-mRNA-1
chr7_3 exon 4202527 4203458 4202527 ID=Msa1090310-mRNA-1:exon:1577;Parent=Msa1090310-mRNA-1
chr7_3 exon 4203585 4203670 4203585 ID=Msa1090310-mRNA-1:exon:1578;Parent=Msa1090310-mRNA-1
chr7_3 exon 4207484 4207555 4207484 ID=Msa1090310-mRNA-1:exon:1579;Parent=Msa1090310-mRNA-1
chr7_3 exon 4207671 4207760 4207671 ID=Msa1090310-mRNA-1:exon:1580;Parent=Msa1090310-mRNA-1
chr7_3 exon 4207841 4207988 4207841 ID=Msa1090310-mRNA-1:exon:1581;Parent=Msa1090310-mRNA-1
chr7_3 exon 4208307 4208991 4208307 ID=Msa1090310-mRNA-1:exon:1582;Parent=Msa1090310-mRNA-1
chr7_3 CDS 4192622 4192850 4192622 ID=Msa1090310-mRNA-1:cds;Parent=Msa1090310-mRNA-1
chr7_3 CDS 4192981 4193140 4192981 ID=Msa1090310-mRNA-1:cds;Parent=Msa1090310-mRNA-1
chr7_3 CDS 4193778 4193829 4193778 ID=Msa1090310-mRNA-1:cds;Parent=Msa1090310-mRNA-1
chr7_3 CDS 4194265 4194456 4194265 ID=Msa1090310-mRNA-1:cds;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4194457 4194513 4194457 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4197471 4197553 4197471 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4198070 4198199 4198070 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4198707 4198791 4198707 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4198872 4198949 4198872 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4202527 4203458 4202527 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4203585 4203670 4203585 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4207484 4207555 4207484 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4207671 4207760 4207671 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4207841 4207988 4207841 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
chr7_3 three_prime_UTR 4208307 4208991 4208307 ID=Msa1090310-mRNA-1:three_prime_utr;Parent=Msa1090310-mRNA-1
Gene Sequence

>Msa1090310

ATGTTGCTGGGTACTCTCGGATTCTCCAGAACATTCAATTGGTTTTACTATATCTCCTTCTACAATCTAAAAACTCTTCACCCTACTACCCTTCATTCCTCCTTCTCTTATTTCTCAATTTTCTTCTTCAATTCTATCAATTGTCTTTATCCATCTCTCACACTTCATGTTCATTTTCGTTCACATGCAACAATTGAAGCGCTAAATCTGGGTGATTTGGCACAGATTAAATTGAGTTTGGGAGGCAGAATCGATATTCAGATCCGAGCGAGTCTAGCGCTTCAAACATTTCACCGTACAAACAATTCAAGGTCAAATGTATCTTCTCTTGAAATCTCAGCGCGCAAGGTCCTAGGGTTTGCAAGAACTCGGCTACGGCGGGATTTTCAGCTTATTCTTCTGAAATCTGTAGAGAAGAATACCTGTGATATGTCTGATGCAGTAAATGCGTTATCTCATATTGCTGAAGTGAAATTGAACTCTGATGGCCTTGCTGCCATTAAGAAATTGATACAAAAGCACCTTGAGCAAGACAAGAGGGTGCTACATGGTGATAATCAGGATGGAGAGACCACTGTTGACATGCTTGATAATTCATCTTCTTCCATAAATTCTTCAGACGAGAAAAATTAG

Protein sequence

>Msa1090310

MLLGTLGFSRTFNWFYYISFYNLKTLHPTTLHSSFSYFSIFFFNSINCLYPSLTLHVHFRSHATIEALNLGDLAQIKLSLGGRIDIQIRASLALQTFHRTNNSRSNVSSLEISARKVLGFARTRLRRDFQLILLKSVEKNTCDMSDAVNALSHIAEVKLNSDGLAAIKKLIQKHLEQDKRVLHGDNQDGETTVDMLDNSSSSINSSDEKN*