Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254750 | XP_003629374.1 | 94.278 | 734 | 41 | 1 | 14 | 746 | 14 | 747 | 0.0 | 1379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254750 | sp|Q96EZ8|MCRS1_HUMAN | 33.146 | 178 | 109 | 5 | 554 | 731 | 282 | 449 | 1.46e-15 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254750 | G7LD19 | 94.278 | 734 | 41 | 1 | 14 | 746 | 14 | 747 | 0.0 | 1379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002410 | Msa1254750 | 0.840167 | 1.023276e-57 | -8.615850e-47 |
| Msa0012520 | Msa1254750 | 0.818145 | 2.283159e-52 | -8.615850e-47 |
| Msa0653460 | Msa1254750 | 0.816073 | 6.671968e-52 | -8.615850e-47 |
| Msa0657970 | Msa1254750 | 0.809873 | 1.525573e-50 | -8.615850e-47 |
| Msa0697140 | Msa1254750 | 0.807695 | 4.457315e-50 | -8.615850e-47 |
| Msa0722930 | Msa1254750 | 0.825482 | 4.576141e-54 | -8.615850e-47 |
| Msa0723140 | Msa1254750 | 0.815861 | 7.441021e-52 | -8.615850e-47 |
| Msa0769390 | Msa1254750 | 0.806809 | 6.868016e-50 | -8.615850e-47 |
| Msa0769930 | Msa1254750 | 0.812962 | 3.255998e-51 | -8.615850e-47 |
| Msa0789690 | Msa1254750 | 0.829686 | 4.479633e-55 | -8.615850e-47 |
| Msa0810480 | Msa1254750 | 0.809414 | 1.914800e-50 | -8.615850e-47 |
| Msa0140780 | Msa1254750 | 0.803831 | 2.888633e-49 | -8.615850e-47 |
| Msa0152420 | Msa1254750 | 0.812904 | 3.353219e-51 | -8.615850e-47 |
| Msa0200260 | Msa1254750 | 0.824071 | 9.846259e-54 | -8.615850e-47 |
| Msa0201330 | Msa1254750 | 0.802390 | 5.738495e-49 | -8.615850e-47 |
| Msa0221060 | Msa1254750 | 0.810318 | 1.223177e-50 | -8.615850e-47 |
| Msa0222700 | Msa1254750 | 0.836865 | 7.284913e-57 | -8.615850e-47 |
| Msa1228210 | Msa1254750 | 0.820878 | 5.434996e-53 | -8.615850e-47 |
| Msa1254750 | Msa1257870 | -0.809895 | 1.509150e-50 | -8.615850e-47 |
| Msa1254750 | Msa1261470 | 0.801085 | 1.063289e-48 | -8.615850e-47 |
| Msa1254750 | Msa1269080 | 0.808455 | 3.070571e-50 | -8.615850e-47 |
| Msa1254750 | Msa1271280 | 0.812223 | 4.724320e-51 | -8.615850e-47 |
| Msa1254750 | Msa1271290 | 0.801648 | 8.152667e-49 | -8.615850e-47 |
| Msa1254750 | Msa1271300 | 0.823161 | 1.607379e-53 | -8.615850e-47 |
| Msa1254750 | Msa1308380 | 0.819363 | 1.207842e-52 | -8.615850e-47 |
| Msa1254750 | Msa1324550 | 0.809164 | 2.166564e-50 | -8.615850e-47 |
| Msa1254750 | Msa1428310 | 0.811495 | 6.805636e-51 | -8.615850e-47 |
| Msa1254750 | Msa1431430 | 0.816234 | 6.143032e-52 | -8.615850e-47 |
| Msa1254750 | Msa1464940 | 0.804789 | 1.824710e-49 | -8.615850e-47 |
| Msa0416800 | Msa1254750 | 0.837258 | 5.780514e-57 | -8.615850e-47 |
| Msa0423090 | Msa1254750 | 0.801345 | 9.409448e-49 | -8.615850e-47 |
| Msa0427880 | Msa1254750 | 0.813246 | 2.821071e-51 | -8.615850e-47 |
| Msa0428930 | Msa1254750 | 0.838104 | 3.506685e-57 | -8.615850e-47 |
| Msa0463460 | Msa1254750 | 0.817617 | 3.005452e-52 | -8.615850e-47 |
| Msa0474110 | Msa1254750 | 0.801105 | 1.053245e-48 | -8.615850e-47 |
| Msa0475490 | Msa1254750 | 0.809243 | 2.083827e-50 | -8.615850e-47 |
| Msa0996130 | Msa1254750 | 0.840963 | 6.333512e-58 | -8.615850e-47 |
| Msa1001200 | Msa1254750 | 0.825124 | 5.562871e-54 | -8.615850e-47 |
| Msa1077390 | Msa1254750 | 0.806346 | 8.603314e-50 | -8.615850e-47 |
| Msa1090310 | Msa1254750 | 0.800866 | 1.178774e-48 | -8.615850e-47 |
| Msa1098560 | Msa1254750 | 0.807166 | 5.773387e-50 | -8.615850e-47 |
| Msa1105450 | Msa1254750 | 0.810938 | 8.986979e-51 | -8.615850e-47 |
| Msa0243100 | Msa1254750 | 0.807710 | 4.425711e-50 | -8.615850e-47 |
| Msa0262520 | Msa1254750 | 0.801910 | 7.202833e-49 | -8.615850e-47 |
| Msa0264040 | Msa1254750 | 0.815013 | 1.148714e-51 | -8.615850e-47 |
| Msa0270270 | Msa1254750 | 0.808714 | 2.704481e-50 | -8.615850e-47 |
| Msa0294950 | Msa1254750 | 0.830553 | 2.753086e-55 | -8.615850e-47 |
| Msa0302000 | Msa1254750 | 0.817739 | 2.820312e-52 | -8.615850e-47 |
| Msa0331920 | Msa1254750 | 0.813792 | 2.138779e-51 | -8.615850e-47 |
| Msa0338110 | Msa1254750 | 0.806580 | 7.678595e-50 | -8.615850e-47 |
| Msa0339320 | Msa1254750 | 0.828481 | 8.778430e-55 | -8.615850e-47 |
| Msa0362740 | Msa1254750 | 0.804832 | 1.787847e-49 | -8.615850e-47 |
| Msa1160280 | Msa1254750 | 0.803812 | 2.915070e-49 | -8.615850e-47 |
| Msa1189430 | Msa1254750 | 0.813332 | 2.700136e-51 | -8.615850e-47 |
| Msa0509020 | Msa1254750 | 0.818587 | 1.813626e-52 | -8.615850e-47 |
| Msa0514030 | Msa1254750 | 0.801327 | 9.487997e-49 | -8.615850e-47 |
| Msa0599890 | Msa1254750 | 0.803577 | 3.262791e-49 | -8.615850e-47 |
| Msa0843280 | Msa1254750 | 0.807809 | 4.215766e-50 | -8.615850e-47 |
| Msa0845590 | Msa1254750 | -0.805245 | 1.465055e-49 | -8.615850e-47 |
| Msa0885280 | Msa1254750 | 0.807396 | 5.158588e-50 | -8.615850e-47 |
| Msa0902980 | Msa1254750 | 0.809734 | 1.634294e-50 | -8.615850e-47 |
| Msa0960850 | Msa1254750 | 0.807409 | 5.126995e-50 | -8.615850e-47 |
| Msa0961420 | Msa1254750 | -0.807704 | 4.439226e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254750 | MtrunA17_Chr8g0372371 | 94.278 | 734 | 41 | 1 | 14 | 746 | 14 | 747 | 0.0 | 1379 |
| Msa1254750 | MtrunA17_Chr3g0142211 | 33.106 | 586 | 304 | 24 | 199 | 733 | 297 | 845 | 3.73e-53 | 197 |
| Msa1254750 | MtrunA17_Chr3g0142211 | 41.176 | 119 | 59 | 3 | 13 | 128 | 12 | 122 | 1.72e-18 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254750 | AT3G54350.3 | 51.724 | 174 | 82 | 2 | 563 | 736 | 525 | 696 | 5.02e-50 | 187 |
| Msa1254750 | AT3G54350.5 | 51.724 | 174 | 82 | 2 | 563 | 736 | 525 | 696 | 5.02e-50 | 187 |
| Msa1254750 | AT3G54350.4 | 51.724 | 174 | 82 | 2 | 563 | 736 | 525 | 696 | 5.02e-50 | 187 |
| Msa1254750 | AT3G54350.1 | 51.724 | 174 | 82 | 2 | 563 | 736 | 525 | 696 | 5.02e-50 | 187 |
| Msa1254750 | AT3G54350.2 | 51.724 | 174 | 82 | 2 | 563 | 736 | 525 | 696 | 5.02e-50 | 187 |
| Msa1254750 | AT1G75530.1 | 47.753 | 178 | 90 | 3 | 559 | 736 | 377 | 551 | 3.46e-43 | 165 |
| Msa1254750 | AT1G60700.1 | 39.444 | 180 | 103 | 3 | 558 | 737 | 336 | 509 | 6.95e-30 | 125 |
| Msa1254750 | AT1G60700.2 | 35.294 | 119 | 71 | 3 | 558 | 676 | 336 | 448 | 2.36e-11 | 67.4 |
Find 197 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAATAGTTTAGTTAATTA+TGG | 0.135526 | 8_2:+52910686 | Msa1254750:CDS |
| CTAAGCCTGCTAATGAATTT+AGG | 0.150299 | 8_2:+52911197 | Msa1254750:CDS |
| CACCTCTTTAACAATTGATA+TGG | 0.174058 | 8_2:-52911353 | None:intergenic |
| TCCTCTTAGTTTCTTCGTTT+TGG | 0.208216 | 8_2:-52912682 | None:intergenic |
| TGGTGTGGTTTGGAAGTTTC+TGG | 0.209362 | 8_2:+52909473 | Msa1254750:five_prime_UTR |
| ACCACACCACTGTCAGTTTA+AGG | 0.215865 | 8_2:-52909459 | None:intergenic |
| TATTAATGATTGTTTAAATA+AGG | 0.225327 | 8_2:+52910643 | Msa1254750:CDS |
| GGTTTCGGAGTCACAGAATT+AGG | 0.244968 | 8_2:-52911331 | None:intergenic |
| GTTAATTATGGGAATCAATT+GGG | 0.276762 | 8_2:+52910698 | Msa1254750:CDS |
| TCCTTTGGATGTGTATTAAC+AGG | 0.280068 | 8_2:-52911809 | None:intergenic |
| GTCTTATGTTCCTCTTCCTT+TGG | 0.291542 | 8_2:-52911824 | None:intergenic |
| TATAGAGATATATGTATAAA+TGG | 0.296524 | 8_2:+52914419 | Msa1254750:three_prime_UTR |
| GCAGATACGTTCACAGAATT+AGG | 0.310175 | 8_2:-52911298 | None:intergenic |
| TTAACAATTGATATGGGTTT+CGG | 0.312751 | 8_2:-52911346 | None:intergenic |
| TAATTTGCTTTGACTTTGAT+TGG | 0.327672 | 8_2:-52911638 | None:intergenic |
| TCTCTACCATTATGACATTT+CGG | 0.330693 | 8_2:+52910346 | Msa1254750:CDS |
| CGTTCTCCTTGTGACATTCA+AGG | 0.332388 | 8_2:+52910986 | Msa1254750:CDS |
| TCAATAGTTTAGTTAATTAT+GGG | 0.332520 | 8_2:+52910687 | Msa1254750:CDS |
| TGGGAATCAATTGGGGTTAG+TGG | 0.339990 | 8_2:+52910706 | Msa1254750:CDS |
| TAAGCCTGCTAATGAATTTA+GGG | 0.341449 | 8_2:+52911198 | Msa1254750:CDS |
| GTCCATGCTAGTCTTGAAAA+TGG | 0.343925 | 8_2:+52910812 | Msa1254750:CDS |
| AGTTAATTATGGGAATCAAT+TGG | 0.347856 | 8_2:+52910697 | Msa1254750:CDS |
| TTATACATCAATCAGGAAAT+AGG | 0.350996 | 8_2:+52911872 | Msa1254750:CDS |
| GCTAGCAGTCATGGTGATTC+CGG | 0.360609 | 8_2:+52911115 | Msa1254750:CDS |
| GGCAACCTCCATATTGTTCA+TGG | 0.364552 | 8_2:-52910384 | None:intergenic |
| CAATGAATAAAGTTGTGTTA+TGG | 0.369462 | 8_2:+52914557 | Msa1254750:three_prime_UTR |
| CTGTCAGTTTAAGGAATATT+CGG | 0.369894 | 8_2:-52909450 | None:intergenic |
| CTAGCATGGACCGGCATGTT+AGG | 0.371702 | 8_2:-52910800 | None:intergenic |
| GCACAAATCGAGTTCTTTGC+GGG | 0.372013 | 8_2:-52911580 | None:intergenic |
| GGGGTTAGTGGGAGCTAGGG+CGG | 0.376121 | 8_2:+52910718 | Msa1254750:CDS |
| ATTCCGTAACGGAATACCTT+TGG | 0.382920 | 8_2:-52910301 | None:intergenic |
| GGGTTAGTGGGAGCTAGGGC+GGG | 0.385352 | 8_2:+52910719 | Msa1254750:CDS |
| TGATTACTGATGGAGGAATC+TGG | 0.386185 | 8_2:-52911382 | None:intergenic |
| GGTGCACTTGCAGTATTGTA+TGG | 0.388832 | 8_2:+52912764 | Msa1254750:CDS |
| GCTTGCTCAGATTCTTGAAA+TGG | 0.389161 | 8_2:+52912055 | Msa1254750:intron |
| CATTCCTTCGAACTCTTCCT+TGG | 0.393267 | 8_2:+52911477 | Msa1254750:CDS |
| ACCTCTTTAACAATTGATAT+GGG | 0.395536 | 8_2:-52911352 | None:intergenic |
| CTAAATTCATTAGCAGGCTT+AGG | 0.397686 | 8_2:-52911196 | None:intergenic |
| ATAAATGGCTGCTGCTCAAT+GGG | 0.402386 | 8_2:+52914434 | Msa1254750:three_prime_UTR |
| TCTTTCCGCATAAAGAATCT+TGG | 0.406506 | 8_2:+52913965 | Msa1254750:CDS |
| TCCATATGAGGCATGCTTCA+TGG | 0.408505 | 8_2:-52911671 | None:intergenic |
| TTCCGTAACGGAATACCTTT+GGG | 0.410362 | 8_2:-52910300 | None:intergenic |
| CTCTGTGGACCTTGGAATCA+AGG | 0.410983 | 8_2:+52910439 | Msa1254750:CDS |
| TGGTCCGTCTGCTGAGTTAG+AGG | 0.411748 | 8_2:+52911075 | Msa1254750:CDS |
| GGTTAGTGGGAGCTAGGGCG+GGG | 0.415085 | 8_2:+52910720 | Msa1254750:CDS |
| ACCATGAAGCATGCCTCATA+TGG | 0.423854 | 8_2:+52911670 | Msa1254750:CDS |
| TCTATAGGCTTTAATAAAGA+TGG | 0.426126 | 8_2:+52913931 | Msa1254750:intron |
| GGAGAAGGAAACAACACCTT+TGG | 0.429288 | 8_2:-52910279 | None:intergenic |
| CAGATTCTTGAAATGGACTT+AGG | 0.430728 | 8_2:+52912062 | Msa1254750:intron |
| TCCTTTGTCATGCAGTTCAC+TGG | 0.431687 | 8_2:+52909401 | Msa1254750:five_prime_UTR |
| CATCCTCAATGCCATCGGTC+GGG | 0.436942 | 8_2:-52911255 | None:intergenic |
| TTCCACGGAGGAGGAGGAGG+AGG | 0.442426 | 8_2:-52909540 | None:intergenic |
| TGATGTCATTTGTCTTTGTT+CGG | 0.443160 | 8_2:-52914273 | None:intergenic |
| GATATTGACTTGGCTAAAGA+AGG | 0.445228 | 8_2:+52913407 | Msa1254750:CDS |
| CAGATGCGGGGTCTGAGATC+TGG | 0.445422 | 8_2:+52914031 | Msa1254750:CDS |
| CTTCATCCGAAATGTCATAA+TGG | 0.447592 | 8_2:-52910352 | None:intergenic |
| TAAGAGGACCATCATAAGAT+TGG | 0.449468 | 8_2:+52912697 | Msa1254750:CDS |
| TTCCGTTGCCATGAACAATA+TGG | 0.451931 | 8_2:+52910376 | Msa1254750:CDS |
| CTCCCAAAGGTATTCCGTTA+CGG | 0.456129 | 8_2:+52910298 | Msa1254750:CDS |
| CATGCGCAGCACCAGATGAT+TGG | 0.458762 | 8_2:-52911165 | None:intergenic |
| ACCCATATCAATTGTTAAAG+AGG | 0.459512 | 8_2:+52911351 | Msa1254750:CDS |
| AACATAAGCTCGTCTTCATT+CGG | 0.459889 | 8_2:-52910890 | None:intergenic |
| CAATGCCATCGGTCGGGGAC+GGG | 0.460108 | 8_2:-52911249 | None:intergenic |
| CTTATATTAGGCACTAATCC+TGG | 0.463815 | 8_2:-52911517 | None:intergenic |
| AAAACTATTATACATCAATC+AGG | 0.465693 | 8_2:+52911865 | Msa1254750:CDS |
| AATTGGGGTTAGTGGGAGCT+AGG | 0.466543 | 8_2:+52910714 | Msa1254750:CDS |
| TAAATTCATTAGCAGGCTTA+GGG | 0.468990 | 8_2:-52911195 | None:intergenic |
| GCCTTGGTATCTTGATCGGT+TGG | 0.469401 | 8_2:-52912086 | None:intergenic |
| AAGGAACCTAGAGAGATAGA+AGG | 0.469735 | 8_2:+52914244 | Msa1254750:CDS |
| AGTTGCCTTGGTATCTTGAT+CGG | 0.469951 | 8_2:-52912090 | None:intergenic |
| GAATTCCACGGAGGAGGAGG+AGG | 0.470258 | 8_2:-52909543 | None:intergenic |
| TGCACAAATCGAGTTCTTTG+CGG | 0.470293 | 8_2:-52911581 | None:intergenic |
| TATAAATGGCTGCTGCTCAA+TGG | 0.471013 | 8_2:+52914433 | Msa1254750:three_prime_UTR |
| TCCACAATCAGCAACAAAAC+CGG | 0.471195 | 8_2:-52911134 | None:intergenic |
| CTTGATTTCAAACTTCTACC+TGG | 0.474408 | 8_2:-52911418 | None:intergenic |
| ACACGACTTGCTATGGCAAA+TGG | 0.475036 | 8_2:+52911055 | Msa1254750:CDS |
| TCTATTTCGTAGGTGATACT+TGG | 0.475758 | 8_2:+52913359 | Msa1254750:intron |
| TGTGTAGGGTGGAGCTTCAC+TGG | 0.478703 | 8_2:+52910247 | Msa1254750:intron |
| TTGTGTCGGTTGTCCATATG+AGG | 0.480130 | 8_2:-52911683 | None:intergenic |
| TGTCATCCTTCTATCTCTCT+AGG | 0.481245 | 8_2:-52914250 | None:intergenic |
| CAAAGACAAATGACATCAAA+GGG | 0.488308 | 8_2:+52914278 | Msa1254750:three_prime_UTR |
| GGGAATCAATTGGGGTTAGT+GGG | 0.490834 | 8_2:+52910707 | Msa1254750:CDS |
| AGTTCCTACAGGACAGATGC+GGG | 0.491518 | 8_2:+52914018 | Msa1254750:CDS |
| ATCCTCAATGCCATCGGTCG+GGG | 0.492879 | 8_2:-52911254 | None:intergenic |
| GACTCGCCGGCTAGCAGTCA+TGG | 0.493979 | 8_2:+52911106 | Msa1254750:CDS |
| CAGACCCTAAATTCATTAGC+AGG | 0.495170 | 8_2:-52911202 | None:intergenic |
| ATCCATGGCTCTTCGTGTCA+TGG | 0.495868 | 8_2:-52912735 | None:intergenic |
| AAACTGACAGTGGTGTGGTT+TGG | 0.496899 | 8_2:+52909463 | Msa1254750:five_prime_UTR |
| GGAAGAGAGCTACCCATGAC+TGG | 0.498983 | 8_2:-52909513 | None:intergenic |
| GATTCCATCACCGTTAGGCT+TGG | 0.499958 | 8_2:-52910405 | None:intergenic |
| CATACCTTCGGTAGTTGCCT+TGG | 0.502410 | 8_2:-52912102 | None:intergenic |
| AAGATTGGAGCAATCTTCTC+AGG | 0.502855 | 8_2:+52912712 | Msa1254750:CDS |
| TGAAGAGAGCGTCAGAAACA+TGG | 0.506109 | 8_2:-52910862 | None:intergenic |
| TCCTTGATTCCATCACCGTT+AGG | 0.508623 | 8_2:-52910410 | None:intergenic |
| GTGCACTTGCAGTATTGTAT+GGG | 0.508644 | 8_2:+52912765 | Msa1254750:CDS |
| AGGCTGCTTCCTTGATTCCA+AGG | 0.509128 | 8_2:-52910448 | None:intergenic |
| TTACATGCAGATTAGGGCGT+TGG | 0.510910 | 8_2:+52914168 | Msa1254750:intron |
| TCGGAATTCCACGGAGGAGG+AGG | 0.511220 | 8_2:-52909546 | None:intergenic |
| GAACTGCATGACAAAGGAAG+TGG | 0.512464 | 8_2:-52909396 | None:intergenic |
| CAATCATCTGGTGCTGCGCA+TGG | 0.512470 | 8_2:+52911166 | Msa1254750:CDS |
| ATTGTATGGGCGCACTATGA+AGG | 0.512906 | 8_2:+52912778 | Msa1254750:CDS |
| TCCAAAACGAAGAAACTAAG+AGG | 0.515358 | 8_2:+52912681 | Msa1254750:CDS |
| TGCAGAAACACGACTTGCTA+TGG | 0.517921 | 8_2:+52911048 | Msa1254750:CDS |
| CATATCAATTGTTAAAGAGG+TGG | 0.518010 | 8_2:+52911354 | Msa1254750:CDS |
| TTAATTATGGGAATCAATTG+GGG | 0.518764 | 8_2:+52910699 | Msa1254750:CDS |
| GCCTAACGGTGATGGAATCA+AGG | 0.523213 | 8_2:+52910409 | Msa1254750:CDS |
| AAGAGGTCTATATTCTTGAA+TGG | 0.524911 | 8_2:+52913989 | Msa1254750:CDS |
| GAGATCTGGTAGTTTGATCC+AGG | 0.525954 | 8_2:+52914045 | Msa1254750:CDS |
| TCTTCCATTGTCTTCCAAAG+TGG | 0.526508 | 8_2:-52910767 | None:intergenic |
| TGTTGGTGAGTCTCAGAAGT+TGG | 0.526987 | 8_2:+52911024 | Msa1254750:CDS |
| GGCGAGGATATGTCTGTTGT+TGG | 0.527257 | 8_2:+52911007 | Msa1254750:CDS |
| CAATGAGTGAAGATCCACTT+TGG | 0.527642 | 8_2:+52910753 | Msa1254750:CDS |
| TCAATGCCATCGGTCGGGGA+CGG | 0.529978 | 8_2:-52911250 | None:intergenic |
| GAAGCAGTCTCTGTGGACCT+TGG | 0.530276 | 8_2:+52910431 | Msa1254750:CDS |
| AACTGCATGACAAAGGAAGT+GGG | 0.531349 | 8_2:-52909395 | None:intergenic |
| TCGCGTAGTACTTCTTGCGA+AGG | 0.533312 | 8_2:-52910508 | None:intergenic |
| GGATGTGTATTAACAGGTGA+AGG | 0.535244 | 8_2:-52911803 | None:intergenic |
| CTACCCATGACTGGAAAAGA+AGG | 0.535736 | 8_2:-52909504 | None:intergenic |
| AACGGAATACCTTTGGGAGA+AGG | 0.537988 | 8_2:-52910294 | None:intergenic |
| GTTGCCAAGCCTAACGGTGA+TGG | 0.538103 | 8_2:+52910401 | Msa1254750:CDS |
| GGCCATGACACGAAGAGCCA+TGG | 0.543316 | 8_2:+52912733 | Msa1254750:CDS |
| TGGATGTTACTGCCCGGAAG+AGG | 0.544252 | 8_2:+52910474 | Msa1254750:CDS |
| GGAAATGAAGTCCAATCATC+TGG | 0.546683 | 8_2:+52911154 | Msa1254750:CDS |
| GAAGTTTATAGAAAATGAGA+AGG | 0.547035 | 8_2:+52914225 | Msa1254750:CDS |
| AAGTGCACCGCGAGAATCCA+TGG | 0.549662 | 8_2:-52912750 | None:intergenic |
| CTCCATATTGTTCATGGCAA+CGG | 0.553228 | 8_2:-52910378 | None:intergenic |
| ATATCAATTGTTAAAGAGGT+GGG | 0.556168 | 8_2:+52911355 | Msa1254750:CDS |
| ATACCTCAACGGCGCTCTTG+AGG | 0.558135 | 8_2:-52909581 | None:intergenic |
| GAAGAGAGCGTCAGAAACAT+GGG | 0.560522 | 8_2:-52910861 | None:intergenic |
| CCCTCAACATCAGAAAAGTA+CGG | 0.562884 | 8_2:-52911950 | None:intergenic |
| ACAAAGACAAATGACATCAA+AGG | 0.563122 | 8_2:+52914277 | Msa1254750:three_prime_UTR |
| TTAATAAAGATGGCGGCAGA+TGG | 0.567970 | 8_2:+52913941 | Msa1254750:CDS |
| ACCTGTTAATACACATCCAA+AGG | 0.570905 | 8_2:+52911808 | Msa1254750:CDS |
| TGGAGCTTCACTGGAATCGT+TGG | 0.571657 | 8_2:+52910256 | Msa1254750:CDS |
| TAATACACATCCAAAGGAAG+AGG | 0.575105 | 8_2:+52911814 | Msa1254750:CDS |
| ACATCCTCAATGCCATCGGT+CGG | 0.575307 | 8_2:-52911256 | None:intergenic |
| AATGGCAAAGAAGTTCCTAC+AGG | 0.576635 | 8_2:+52914007 | Msa1254750:CDS |
| CGTACATGTTGATATTGACT+TGG | 0.578507 | 8_2:+52913397 | Msa1254750:CDS |
| AGATTGCTCCAATCTTATGA+TGG | 0.578874 | 8_2:-52912705 | None:intergenic |
| GTGTTGTTTCCTTCTCCCAA+AGG | 0.584378 | 8_2:+52910285 | Msa1254750:CDS |
| ATTGGGGTTAGTGGGAGCTA+GGG | 0.585843 | 8_2:+52910715 | Msa1254750:CDS |
| TCTTGCCAAGATTCTTTATG+CGG | 0.587252 | 8_2:-52913970 | None:intergenic |
| GCTTTGCAGTCAGTTCAACC+AGG | 0.590192 | 8_2:+52911499 | Msa1254750:CDS |
| ATATTGACTTGGCTAAAGAA+GGG | 0.590557 | 8_2:+52913408 | Msa1254750:CDS |
| TCCTTAAACTGACAGTGGTG+TGG | 0.590843 | 8_2:+52909458 | Msa1254750:five_prime_UTR |
| ATGGAGGTTGCCAAGCCTAA+CGG | 0.591598 | 8_2:+52910395 | Msa1254750:CDS |
| TTACGGAATTGACTGAGCGC+TGG | 0.592371 | 8_2:+52910315 | Msa1254750:CDS |
| AAATGGCTGCTGCTCAATGG+GGG | 0.593349 | 8_2:+52914436 | Msa1254750:three_prime_UTR |
| TTGAACTGACTGCAAAGCCA+AGG | 0.600142 | 8_2:-52911494 | None:intergenic |
| TAGAAGTTTGAAATCAAGCA+AGG | 0.600469 | 8_2:+52911423 | Msa1254750:CDS |
| ATTAGTGCCTAATATAAGCA+AGG | 0.600913 | 8_2:+52911522 | Msa1254750:CDS |
| CCTCTGTGGATGTTACTGCC+CGG | 0.602428 | 8_2:+52910468 | Msa1254750:CDS |
| AGAGGTTGTTGCTGACTCGC+CGG | 0.604199 | 8_2:+52911093 | Msa1254750:CDS |
| ACAAAGGAAGTGGGGAAGAG+AGG | 0.605210 | 8_2:-52909386 | None:intergenic |
| GAATCACCATGACTGCTAGC+CGG | 0.606700 | 8_2:-52911112 | None:intergenic |
| CTTGAGGACAAAATCGTCAT+CGG | 0.608291 | 8_2:-52909565 | None:intergenic |
| TGTCTCTGCACCTAACATGC+CGG | 0.608333 | 8_2:+52910790 | Msa1254750:CDS |
| GTTTACATCCTCAATGCCAT+CGG | 0.614109 | 8_2:-52911260 | None:intergenic |
| TGTCCTCAAGAGCGCCGTTG+AGG | 0.615872 | 8_2:+52909578 | Msa1254750:CDS |
| GTCCCCGACCGATGGCATTG+AGG | 0.616758 | 8_2:+52911252 | Msa1254750:CDS |
| AAGTTCCTACAGGACAGATG+CGG | 0.618106 | 8_2:+52914017 | Msa1254750:CDS |
| TCCTTGTGACATTCAAGGCG+AGG | 0.618473 | 8_2:+52910991 | Msa1254750:CDS |
| TCACTGGAATCGTTGGCCAA+AGG | 0.621631 | 8_2:+52910263 | Msa1254750:CDS |
| AGATCCACTTTGGAAGACAA+TGG | 0.621698 | 8_2:+52910763 | Msa1254750:CDS |
| ACCAGTGAACTGCATGACAA+AGG | 0.624287 | 8_2:-52909402 | None:intergenic |
| GGGAATCGTCTCTTTCGACT+CGG | 0.624927 | 8_2:-52910840 | None:intergenic |
| AATCAAGGAAGCAGCCTCTG+TGG | 0.630696 | 8_2:+52910454 | Msa1254750:CDS |
| CGTTGCCATGAACAATATGG+AGG | 0.632311 | 8_2:+52910379 | Msa1254750:CDS |
| GGAATATATTATACAACCCG+AGG | 0.638798 | 8_2:+52912799 | Msa1254750:CDS |
| TAAATGGCTGCTGCTCAATG+GGG | 0.641764 | 8_2:+52914435 | Msa1254750:three_prime_UTR |
| AATGGCTGCTGCTCAATGGG+GGG | 0.643602 | 8_2:+52914437 | Msa1254750:three_prime_UTR |
| GCATAAAGAATCTTGGCAAG+AGG | 0.645201 | 8_2:+52913972 | Msa1254750:CDS |
| TCAGTTTAAGGAATATTCGG+AGG | 0.651194 | 8_2:-52909447 | None:intergenic |
| TCCTCGCCTTGAATGTCACA+AGG | 0.652533 | 8_2:-52910992 | None:intergenic |
| AATATTCCTTAAACTGACAG+TGG | 0.653481 | 8_2:+52909453 | Msa1254750:five_prime_UTR |
| ACAACCTCTAACTCAGCAGA+CGG | 0.658524 | 8_2:-52911079 | None:intergenic |
| AAATCGTCATCGGAATTCCA+CGG | 0.659600 | 8_2:-52909555 | None:intergenic |
| GCGCTCAGTCAATTCCGTAA+CGG | 0.662285 | 8_2:-52910312 | None:intergenic |
| CGAGAGTAGTTATACCTCAA+CGG | 0.662451 | 8_2:-52909592 | None:intergenic |
| AAAGCCAAGGAAGAGTTCGA+AGG | 0.663248 | 8_2:-52911481 | None:intergenic |
| TCCAACCGATCAAGATACCA+AGG | 0.663953 | 8_2:+52912085 | Msa1254750:CDS |
| ATATGGACAACCGACACAAG+AGG | 0.665822 | 8_2:+52911687 | Msa1254750:CDS |
| GATACCAAGGCAACTACCGA+AGG | 0.665868 | 8_2:+52912098 | Msa1254750:CDS |
| TGATGTCAATAAGAAATGCG+TGG | 0.668101 | 8_2:+52914201 | Msa1254750:CDS |
| ATAGGCTTTAATAAAGATGG+CGG | 0.673370 | 8_2:+52913934 | Msa1254750:intron |
| ACACATCTAACCTCTTGTGT+CGG | 0.674552 | 8_2:-52911697 | None:intergenic |
| AATCAAGGAAGCAGTCTCTG+TGG | 0.676153 | 8_2:+52910424 | Msa1254750:CDS |
| CACAGAATTAGGAACTACAG+TGG | 0.677070 | 8_2:-52911287 | None:intergenic |
| GCAAGAAGTACTACGCGATG+CGG | 0.680143 | 8_2:+52910513 | Msa1254750:CDS |
| GCGGAAGAGACTTCGCACAG+AGG | 0.688079 | 8_2:+52910532 | Msa1254750:CDS |
| CATGCTAGTCTTGAAAATGG+AGG | 0.691012 | 8_2:+52910815 | Msa1254750:CDS |
| AAGAGAGCGTCAGAAACATG+GGG | 0.704171 | 8_2:-52910860 | None:intergenic |
| CGAAGAGCCATGGATTCTCG+CGG | 0.705391 | 8_2:+52912743 | Msa1254750:CDS |
| ACTGCATGACAAAGGAAGTG+GGG | 0.714651 | 8_2:-52909394 | None:intergenic |
| GTTCCTACAGGACAGATGCG+GGG | 0.714654 | 8_2:+52914019 | Msa1254750:CDS |
| CCGGGCAGTAACATCCACAG+AGG | 0.773250 | 8_2:-52910468 | None:intergenic |
| TCGTCATCGGAATTCCACGG+AGG | 0.807512 | 8_2:-52909552 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATACTTTTGATA+TGG | + | chr8_2:52910556-52910575 | Msa1254750:CDS | 10.0% |
| !! | TATTAATGATTGTTTAAATA+AGG | + | chr8_2:52910643-52910662 | Msa1254750:CDS | 10.0% |
| !! | TGTTAAAAATTTGAAAATAA+AGG | + | chr8_2:52912403-52912422 | Msa1254750:intron | 10.0% |
| !!! | TTTAAATTTTTGAATGAAAA+TGG | + | chr8_2:52912426-52912445 | Msa1254750:intron | 10.0% |
| !! | AAAATTCAATTAAAAATTTC+TGG | - | chr8_2:52913853-52913872 | None:intergenic | 10.0% |
| !!! | AAAATATTTTTTCTTCAGTT+GGG | - | chr8_2:52909710-52909729 | None:intergenic | 15.0% |
| !!! | AAAAATATTTTTTCTTCAGT+TGG | - | chr8_2:52909711-52909730 | None:intergenic | 15.0% |
| !! | ATATGATTGATTATAAAAAC+TGG | - | chr8_2:52909827-52909846 | None:intergenic | 15.0% |
| !! | TCAATAGTTTAGTTAATTAT+GGG | + | chr8_2:52910687-52910706 | Msa1254750:CDS | 15.0% |
| !!! | TAAAGTTCTTAATTTTTGAA+AGG | + | chr8_2:52912166-52912185 | Msa1254750:intron | 15.0% |
| !!! | AAAGTTCTTAATTTTTGAAA+GGG | + | chr8_2:52912167-52912186 | Msa1254750:intron | 15.0% |
| !!! | GATTTTAAATTTTACTTCAA+AGG | + | chr8_2:52912379-52912398 | Msa1254750:intron | 15.0% |
| !! | AATGTTTATGAAAACAATTA+CGG | + | chr8_2:52912550-52912569 | Msa1254750:intron | 15.0% |
| !! | ATAACTATCATAGATATAAA+AGG | - | chr8_2:52913144-52913163 | None:intergenic | 15.0% |
| !!! | TACATTTAAATTTCTGATTT+TGG | + | chr8_2:52913251-52913270 | Msa1254750:intron | 15.0% |
| !! | TGAGAAAAAATATTTAAACT+GGG | - | chr8_2:52913322-52913341 | None:intergenic | 15.0% |
| !! | ATGAGAAAAAATATTTAAAC+TGG | - | chr8_2:52913323-52913342 | None:intergenic | 15.0% |
| !! | TTATCAACAAAATATTATTC+TGG | - | chr8_2:52913823-52913842 | None:intergenic | 15.0% |
| !!! | ACTATTATAACTTCTATTTT+TGG | - | chr8_2:52914329-52914348 | None:intergenic | 15.0% |
| !! | TATAGAGATATATGTATAAA+TGG | + | chr8_2:52914419-52914438 | Msa1254750:three_prime_UTR | 15.0% |
| !!! | TGTTTTAAATAGTTTTGTTT+TGG | + | chr8_2:52914499-52914518 | Msa1254750:three_prime_UTR | 15.0% |
| !!! | GTTTTAAATAGTTTTGTTTT+GGG | + | chr8_2:52914500-52914519 | Msa1254750:three_prime_UTR | 15.0% |
| !!! | GTAACATTTTCATTTCATTT+TGG | - | chr8_2:52909367-52909386 | None:intergenic | 20.0% |
| !!! | AAATATTTTTTCTTCAGTTG+GGG | - | chr8_2:52909709-52909728 | None:intergenic | 20.0% |
| !!! | AACATATTTTTGTGTAGTTT+GGG | + | chr8_2:52909959-52909978 | Msa1254750:intron | 20.0% |
| !! | GTCAATAGTTTAGTTAATTA+TGG | + | chr8_2:52910686-52910705 | Msa1254750:CDS | 20.0% |
| !!! | ATTTCTTTTTTGATTACTGA+TGG | - | chr8_2:52911395-52911414 | None:intergenic | 20.0% |
| !!! | TGAAGTTATATGTTATTTAC+AGG | + | chr8_2:52911766-52911785 | Msa1254750:intron | 20.0% |
| !! | AAAACTATTATACATCAATC+AGG | + | chr8_2:52911865-52911884 | Msa1254750:CDS | 20.0% |
| !! | AAACAAACACAAATGAATAT+GGG | - | chr8_2:52912016-52912035 | None:intergenic | 20.0% |
| !! | TAAACAAACACAAATGAATA+TGG | - | chr8_2:52912017-52912036 | None:intergenic | 20.0% |
| !!! | GTTTTCATAAACATTTATGA+AGG | - | chr8_2:52912545-52912564 | None:intergenic | 20.0% |
| !! | ATTACTATAATACCTAGAAA+TGG | - | chr8_2:52912613-52912632 | None:intergenic | 20.0% |
| !!! | ATTTCTAGGTATTATAGTAA+TGG | + | chr8_2:52912612-52912631 | Msa1254750:intron | 20.0% |
| !!! | TCTTGTTTTCCTTTAAAATA+TGG | + | chr8_2:52912842-52912861 | Msa1254750:intron | 20.0% |
| !!! | CTTGTTTTCCTTTAAAATAT+GGG | + | chr8_2:52912843-52912862 | Msa1254750:intron | 20.0% |
| !!! | TTGTTTTCCTTTAAAATATG+GGG | + | chr8_2:52912844-52912863 | Msa1254750:intron | 20.0% |
| !! | ATTAATGTTCATCCTAATAA+AGG | - | chr8_2:52913201-52913220 | None:intergenic | 20.0% |
| !! | AGAAATTTAAATGTAGATCT+AGG | - | chr8_2:52913246-52913265 | None:intergenic | 20.0% |
| !! | TAGATATGTATGAACTTTAA+AGG | - | chr8_2:52913531-52913550 | None:intergenic | 20.0% |
| !!! | AGTTCATACATATCTATTTT+CGG | + | chr8_2:52913535-52913554 | Msa1254750:intron | 20.0% |
| !!! | AAAGCTTTTATTTACCTATT+TGG | + | chr8_2:52913706-52913725 | Msa1254750:intron | 20.0% |
| !!! | TTTTTGGTGATTTAACTTAA+TGG | + | chr8_2:52913750-52913769 | Msa1254750:intron | 20.0% |
| !!! | TTTTGGTGATTTAACTTAAT+GGG | + | chr8_2:52913751-52913770 | Msa1254750:intron | 20.0% |
| !! | AACTACTACTTATTATCTAT+AGG | + | chr8_2:52913916-52913935 | Msa1254750:intron | 20.0% |
| !!! | GTATTGATTTGGTAAATAAA+TGG | + | chr8_2:52914144-52914163 | Msa1254750:intron | 20.0% |
| !!! | GAACATATTTTTGTGTAGTT+TGG | + | chr8_2:52909958-52909977 | Msa1254750:intron | 25.0% |
| ! | AGTTAATTATGGGAATCAAT+TGG | + | chr8_2:52910697-52910716 | Msa1254750:CDS | 25.0% |
| ! | GTTAATTATGGGAATCAATT+GGG | + | chr8_2:52910698-52910717 | Msa1254750:CDS | 25.0% |
| ! | TTAATTATGGGAATCAATTG+GGG | + | chr8_2:52910699-52910718 | Msa1254750:CDS | 25.0% |
| ! | TTAACAATTGATATGGGTTT+CGG | - | chr8_2:52911349-52911368 | None:intergenic | 25.0% |
| ! | ACCTCTTTAACAATTGATAT+GGG | - | chr8_2:52911355-52911374 | None:intergenic | 25.0% |
| ! | ATATCAATTGTTAAAGAGGT+GGG | + | chr8_2:52911355-52911374 | Msa1254750:CDS | 25.0% |
| ! | AATCAAAAAAGAAATGAACC+AGG | + | chr8_2:52911400-52911419 | Msa1254750:CDS | 25.0% |
| !!! | TAATTTGCTTTGACTTTGAT+TGG | - | chr8_2:52911641-52911660 | None:intergenic | 25.0% |
| ! | TTATACATCAATCAGGAAAT+AGG | + | chr8_2:52911872-52911891 | Msa1254750:CDS | 25.0% |
| ! | AACAAACACAAATGAATATG+GGG | - | chr8_2:52912015-52912034 | None:intergenic | 25.0% |
| ! | AATTAAACCATCCATTTACA+TGG | - | chr8_2:52912255-52912274 | None:intergenic | 25.0% |
| ! | TTTAATTCTGTTTCCAGAAA+TGG | + | chr8_2:52912268-52912287 | Msa1254750:intron | 25.0% |
| !! | AATTTAAAATCCTATGCAGA+GGG | - | chr8_2:52912370-52912389 | None:intergenic | 25.0% |
| !! | AAATTTAAAATCCTATGCAG+AGG | - | chr8_2:52912371-52912390 | None:intergenic | 25.0% |
| ! | TCCTTATATTAGTAATATGC+TGG | + | chr8_2:52912515-52912534 | Msa1254750:intron | 25.0% |
| ! | ACCAGCATATTACTAATATA+AGG | - | chr8_2:52912519-52912538 | None:intergenic | 25.0% |
| ! | TGATTCATTATGATGATATG+AGG | - | chr8_2:52912899-52912918 | None:intergenic | 25.0% |
| !!! | TTAGATTTTGATATCTTCCT+AGG | + | chr8_2:52913073-52913092 | Msa1254750:intron | 25.0% |
| !! | AATAAAGGTCAATCTTTTTG+TGG | - | chr8_2:52913186-52913205 | None:intergenic | 25.0% |
| ! | CAAAAAGATTGACCTTTATT+AGG | + | chr8_2:52913186-52913205 | Msa1254750:intron | 25.0% |
| !! | ACAATCTTTTTCTATTTCGT+AGG | + | chr8_2:52913349-52913368 | Msa1254750:intron | 25.0% |
| !! | GTTCATACATATCTATTTTC+GGG | + | chr8_2:52913536-52913555 | Msa1254750:intron | 25.0% |
| !! | TTCATACATATCTATTTTCG+GGG | + | chr8_2:52913537-52913556 | Msa1254750:intron | 25.0% |
| !! | TTTGGTGATTTAACTTAATG+GGG | + | chr8_2:52913752-52913771 | Msa1254750:intron | 25.0% |
| ! | TTCTAATATAAATTCAGCAG+AGG | - | chr8_2:52913887-52913906 | None:intergenic | 25.0% |
| !! | TCTATAGGCTTTAATAAAGA+TGG | + | chr8_2:52913931-52913950 | Msa1254750:intron | 25.0% |
| ! | GAAGTTTATAGAAAATGAGA+AGG | + | chr8_2:52914225-52914244 | Msa1254750:CDS | 25.0% |
| !!! | TTATAACTTCTATTTTTGGC+TGG | - | chr8_2:52914325-52914344 | None:intergenic | 25.0% |
| ! | CAATGAATAAAGTTGTGTTA+TGG | + | chr8_2:52914557-52914576 | Msa1254750:three_prime_UTR | 25.0% |
| CTGTCAGTTTAAGGAATATT+CGG | - | chr8_2:52909453-52909472 | None:intergenic | 30.0% | |
| AATATTCCTTAAACTGACAG+TGG | + | chr8_2:52909453-52909472 | Msa1254750:five_prime_UTR | 30.0% | |
| CTTCACAACTTGATTTATTG+AGG | - | chr8_2:52909751-52909770 | None:intergenic | 30.0% | |
| !!! | ACGTATTTTAGTGTACTTTG+TGG | + | chr8_2:52909882-52909901 | Msa1254750:intron | 30.0% |
| ! | GAACATATTTTCGTGTAGTT+TGG | + | chr8_2:52910039-52910058 | Msa1254750:intron | 30.0% |
| TCTCTACCATTATGACATTT+CGG | + | chr8_2:52910346-52910365 | Msa1254750:CDS | 30.0% | |
| TAAATTCATTAGCAGGCTTA+GGG | - | chr8_2:52911198-52911217 | None:intergenic | 30.0% | |
| TAAGCCTGCTAATGAATTTA+GGG | + | chr8_2:52911198-52911217 | Msa1254750:CDS | 30.0% | |
| ACCCATATCAATTGTTAAAG+AGG | + | chr8_2:52911351-52911370 | Msa1254750:CDS | 30.0% | |
| CACCTCTTTAACAATTGATA+TGG | - | chr8_2:52911356-52911375 | None:intergenic | 30.0% | |
| CATATCAATTGTTAAAGAGG+TGG | + | chr8_2:52911354-52911373 | Msa1254750:CDS | 30.0% | |
| !!! | TCTTTTTTGATTACTGATGG+AGG | - | chr8_2:52911392-52911411 | None:intergenic | 30.0% |
| ! | TAGAAGTTTGAAATCAAGCA+AGG | + | chr8_2:52911423-52911442 | Msa1254750:CDS | 30.0% |
| ATTAGTGCCTAATATAAGCA+AGG | + | chr8_2:52911522-52911541 | Msa1254750:CDS | 30.0% | |
| TATAATTGTGTATCCAGCAA+GGG | - | chr8_2:52911723-52911742 | None:intergenic | 30.0% | |
| !! | AATAGTTTTGCTTCTGAATC+AGG | - | chr8_2:52911854-52911873 | None:intergenic | 30.0% |
| TTTGTATTGTATCTAGTGTC+AGG | - | chr8_2:52912131-52912150 | None:intergenic | 30.0% | |
| TACACAACTTACCATGTAAA+TGG | + | chr8_2:52912241-52912260 | Msa1254750:intron | 30.0% | |
| GAAAATGGAAATTCATTGCT+TGG | + | chr8_2:52912441-52912460 | Msa1254750:intron | 30.0% | |
| TTCATTATGATGATATGAGG+TGG | - | chr8_2:52912896-52912915 | None:intergenic | 30.0% | |
| TTTATTGTCTTGCATAGTAC+TGG | + | chr8_2:52912955-52912974 | Msa1254750:intron | 30.0% | |
| ! | TTCAAAATTTGTTTCCCGAT+TGG | - | chr8_2:52913019-52913038 | None:intergenic | 30.0% |
| !!! | ATTTTGGTGTTTGCCTAATT+TGG | + | chr8_2:52913267-52913286 | Msa1254750:intron | 30.0% |
| !! | ATATTGACTTGGCTAAAGAA+GGG | + | chr8_2:52913408-52913427 | Msa1254750:CDS | 30.0% |
| ! | TCATACATATCTATTTTCGG+GGG | + | chr8_2:52913538-52913557 | Msa1254750:intron | 30.0% |
| ! | CAGAATCACTACTACATTTT+TGG | + | chr8_2:52913647-52913666 | Msa1254750:intron | 30.0% |
| ! | TTATTTACCTATTTGGAGTG+TGG | + | chr8_2:52913713-52913732 | Msa1254750:intron | 30.0% |
| ! | ATAGGCTTTAATAAAGATGG+CGG | + | chr8_2:52913934-52913953 | Msa1254750:intron | 30.0% |
| AAGAGGTCTATATTCTTGAA+TGG | + | chr8_2:52913989-52914008 | Msa1254750:CDS | 30.0% | |
| TGTAATATAGGAGTTACGTA+GGG | - | chr8_2:52914088-52914107 | None:intergenic | 30.0% | |
| ! | TGATGTCATTTGTCTTTGTT+CGG | - | chr8_2:52914276-52914295 | None:intergenic | 30.0% |
| ACAAAGACAAATGACATCAA+AGG | + | chr8_2:52914277-52914296 | Msa1254750:three_prime_UTR | 30.0% | |
| CAAAGACAAATGACATCAAA+GGG | + | chr8_2:52914278-52914297 | Msa1254750:three_prime_UTR | 30.0% | |
| TCAGTTTAAGGAATATTCGG+AGG | - | chr8_2:52909450-52909469 | None:intergenic | 35.0% | |
| CCAGAAACATTTCAAACTGA+GGG | - | chr8_2:52910201-52910220 | None:intergenic | 35.0% | |
| TCCAGAAACATTTCAAACTG+AGG | - | chr8_2:52910202-52910221 | None:intergenic | 35.0% | |
| ATGATGCTTAATTGCTGTGT+AGG | + | chr8_2:52910232-52910251 | Msa1254750:intron | 35.0% | |
| TGATGCTTAATTGCTGTGTA+GGG | + | chr8_2:52910233-52910252 | Msa1254750:intron | 35.0% | |
| CTTCATCCGAAATGTCATAA+TGG | - | chr8_2:52910355-52910374 | None:intergenic | 35.0% | |
| ACCACTGAAAAAGAAATCGT+TGG | + | chr8_2:52910611-52910630 | Msa1254750:CDS | 35.0% | |
| CCACTGAAAAAGAAATCGTT+GGG | + | chr8_2:52910612-52910631 | Msa1254750:CDS | 35.0% | |
| AACATAAGCTCGTCTTCATT+CGG | - | chr8_2:52910893-52910912 | None:intergenic | 35.0% | |
| CTAAATTCATTAGCAGGCTT+AGG | - | chr8_2:52911199-52911218 | None:intergenic | 35.0% | |
| CTAAGCCTGCTAATGAATTT+AGG | + | chr8_2:52911197-52911216 | Msa1254750:CDS | 35.0% | |
| CTTGATTTCAAACTTCTACC+TGG | - | chr8_2:52911421-52911440 | None:intergenic | 35.0% | |
| CTTATATTAGGCACTAATCC+TGG | - | chr8_2:52911520-52911539 | None:intergenic | 35.0% | |
| ! | GGGTTTTCCTTGCTTATATT+AGG | - | chr8_2:52911532-52911551 | None:intergenic | 35.0% |
| ! | TTTGCGGGATTTTCAGTTTT+CGG | - | chr8_2:52911568-52911587 | None:intergenic | 35.0% |
| GTATAATTGTGTATCCAGCA+AGG | - | chr8_2:52911724-52911743 | None:intergenic | 35.0% | |
| ACCTGTTAATACACATCCAA+AGG | + | chr8_2:52911808-52911827 | Msa1254750:CDS | 35.0% | |
| TCCTTTGGATGTGTATTAAC+AGG | - | chr8_2:52911812-52911831 | None:intergenic | 35.0% | |
| TAATACACATCCAAAGGAAG+AGG | + | chr8_2:52911814-52911833 | Msa1254750:CDS | 35.0% | |
| ! | CAGATTCTTGAAATGGACTT+AGG | + | chr8_2:52912062-52912081 | Msa1254750:intron | 35.0% |
| CATGGTAAGTTGTGTAGATT+TGG | - | chr8_2:52912237-52912256 | None:intergenic | 35.0% | |
| CAACTTACCATGTAAATGGA+TGG | + | chr8_2:52912245-52912264 | Msa1254750:intron | 35.0% | |
| ATTCTGTTTCCAGAAATGGA+CGG | + | chr8_2:52912272-52912291 | Msa1254750:intron | 35.0% | |
| AGTTCTGTGTCCATAACTTA+TGG | + | chr8_2:52912298-52912317 | Msa1254750:intron | 35.0% | |
| !!! | GTTTTTTCTTTGTTCCTGTG+TGG | + | chr8_2:52912470-52912489 | Msa1254750:intron | 35.0% |
| TCGATTATAAGAAACCACAC+AGG | - | chr8_2:52912487-52912506 | None:intergenic | 35.0% | |
| ATATTGCTCGTCATTGAGTT+TGG | + | chr8_2:52912587-52912606 | Msa1254750:intron | 35.0% | |
| !!! | TCGTTTTGGAATCTTGAAAC+TGG | - | chr8_2:52912671-52912690 | None:intergenic | 35.0% |
| TCCAAAACGAAGAAACTAAG+AGG | + | chr8_2:52912681-52912700 | Msa1254750:CDS | 35.0% | |
| ! | TCCTCTTAGTTTCTTCGTTT+TGG | - | chr8_2:52912685-52912704 | None:intergenic | 35.0% |
| TAAGAGGACCATCATAAGAT+TGG | + | chr8_2:52912697-52912716 | Msa1254750:CDS | 35.0% | |
| AGATTGCTCCAATCTTATGA+TGG | - | chr8_2:52912708-52912727 | None:intergenic | 35.0% | |
| GGAATATATTATACAACCCG+AGG | + | chr8_2:52912799-52912818 | Msa1254750:CDS | 35.0% | |
| CAAATTCATAAATGCACCTC+GGG | - | chr8_2:52912818-52912837 | None:intergenic | 35.0% | |
| CCAAATTCATAAATGCACCT+CGG | - | chr8_2:52912819-52912838 | None:intergenic | 35.0% | |
| !! | TTCCTTTAAAATATGGGGAG+AGG | + | chr8_2:52912849-52912868 | Msa1254750:intron | 35.0% |
| !! | TTCCTCTCCCCATATTTTAA+AGG | - | chr8_2:52912854-52912873 | None:intergenic | 35.0% |
| TTATGATGATATGAGGTGGA+AGG | - | chr8_2:52912892-52912911 | None:intergenic | 35.0% | |
| TAATGAATCATGTCATCCTG+AGG | + | chr8_2:52912909-52912928 | Msa1254750:intron | 35.0% | |
| GTAGTCACGAAAGAAATGAA+AGG | - | chr8_2:52913048-52913067 | None:intergenic | 35.0% | |
| TATCTTCCTAGGAGTTTCAA+TGG | + | chr8_2:52913084-52913103 | Msa1254750:intron | 35.0% | |
| TCTATTTCGTAGGTGATACT+TGG | + | chr8_2:52913359-52913378 | Msa1254750:intron | 35.0% | |
| ! | CGTACATGTTGATATTGACT+TGG | + | chr8_2:52913397-52913416 | Msa1254750:CDS | 35.0% |
| !! | GATATTGACTTGGCTAAAGA+AGG | + | chr8_2:52913407-52913426 | Msa1254750:CDS | 35.0% |
| AGAAGACAAGTAAGATAGCT+CGG | + | chr8_2:52913452-52913471 | Msa1254750:intron | 35.0% | |
| AAATCAACCATGCAAGGAAT+TGG | - | chr8_2:52913490-52913509 | None:intergenic | 35.0% | |
| TCAGTAAAATCAACCATGCA+AGG | - | chr8_2:52913496-52913515 | None:intergenic | 35.0% | |
| TCTTTCCGCATAAAGAATCT+TGG | + | chr8_2:52913965-52913984 | Msa1254750:CDS | 35.0% | |
| TCTTGCCAAGATTCTTTATG+CGG | - | chr8_2:52913973-52913992 | None:intergenic | 35.0% | |
| CTGTAATATAGGAGTTACGT+AGG | - | chr8_2:52914089-52914108 | None:intergenic | 35.0% | |
| ACTCCTATATTACAGTAGTG+TGG | + | chr8_2:52914094-52914113 | Msa1254750:intron | 35.0% | |
| TCACCACACTACTGTAATAT+AGG | - | chr8_2:52914100-52914119 | None:intergenic | 35.0% | |
| AAATGGCTTACATGCAGATT+AGG | + | chr8_2:52914161-52914180 | Msa1254750:intron | 35.0% | |
| AATGGCTTACATGCAGATTA+GGG | + | chr8_2:52914162-52914181 | Msa1254750:intron | 35.0% | |
| TGATGTCAATAAGAAATGCG+TGG | + | chr8_2:52914201-52914220 | Msa1254750:CDS | 35.0% | |
| AACTGCATGACAAAGGAAGT+GGG | - | chr8_2:52909398-52909417 | None:intergenic | 40.0% | |
| ! | AGATCCTTCTTTTCCAGTCA+TGG | + | chr8_2:52909500-52909519 | Msa1254750:exon | 40.0% |
| ! | GATCCTTCTTTTCCAGTCAT+GGG | + | chr8_2:52909501-52909520 | Msa1254750:exon | 40.0% |
| AAATCGTCATCGGAATTCCA+CGG | - | chr8_2:52909558-52909577 | None:intergenic | 40.0% | |
| CTTGAGGACAAAATCGTCAT+CGG | - | chr8_2:52909568-52909587 | None:intergenic | 40.0% | |
| CGAGAGTAGTTATACCTCAA+CGG | - | chr8_2:52909595-52909614 | None:intergenic | 40.0% | |
| GCAGAGCATAATTGAGTCTA+GGG | - | chr8_2:52909661-52909680 | None:intergenic | 40.0% | |
| CTAGACTCAATTATGCTCTG+CGG | + | chr8_2:52909660-52909679 | Msa1254750:intron | 40.0% | |
| ! | CCCTCAGTTTGAAATGTTTC+TGG | + | chr8_2:52910198-52910217 | Msa1254750:intron | 40.0% |
| CAGCAATTAAGCATCATCAG+TGG | - | chr8_2:52910229-52910248 | None:intergenic | 40.0% | |
| ! | TTCCGTAACGGAATACCTTT+GGG | - | chr8_2:52910303-52910322 | None:intergenic | 40.0% |
| ! | ATTCCGTAACGGAATACCTT+TGG | - | chr8_2:52910304-52910323 | None:intergenic | 40.0% |
| TTCCGTTGCCATGAACAATA+TGG | + | chr8_2:52910376-52910395 | Msa1254750:CDS | 40.0% | |
| CTCCATATTGTTCATGGCAA+CGG | - | chr8_2:52910381-52910400 | None:intergenic | 40.0% | |
| !!! | CCCAACGATTTCTTTTTCAG+TGG | - | chr8_2:52910615-52910634 | None:intergenic | 40.0% |
| GAAAAAGAAATCGTTGGGTC+TGG | + | chr8_2:52910617-52910636 | Msa1254750:CDS | 40.0% | |
| CAATGAGTGAAGATCCACTT+TGG | + | chr8_2:52910753-52910772 | Msa1254750:CDS | 40.0% | |
| ! | AGATCCACTTTGGAAGACAA+TGG | + | chr8_2:52910763-52910782 | Msa1254750:CDS | 40.0% |
| TCTTCCATTGTCTTCCAAAG+TGG | - | chr8_2:52910770-52910789 | None:intergenic | 40.0% | |
| !! | TTTTCAAGACTAGCATGGAC+CGG | - | chr8_2:52910812-52910831 | None:intergenic | 40.0% |
| !! | GTCCATGCTAGTCTTGAAAA+TGG | + | chr8_2:52910812-52910831 | Msa1254750:CDS | 40.0% |
| !! | CTCCATTTTCAAGACTAGCA+TGG | - | chr8_2:52910817-52910836 | None:intergenic | 40.0% |
| !! | CATGCTAGTCTTGAAAATGG+AGG | + | chr8_2:52910815-52910834 | Msa1254750:CDS | 40.0% |
| TCCACAATCAGCAACAAAAC+CGG | - | chr8_2:52911137-52911156 | None:intergenic | 40.0% | |
| GGAAATGAAGTCCAATCATC+TGG | + | chr8_2:52911154-52911173 | Msa1254750:CDS | 40.0% | |
| CAGACCCTAAATTCATTAGC+AGG | - | chr8_2:52911205-52911224 | None:intergenic | 40.0% | |
| GTTTACATCCTCAATGCCAT+CGG | - | chr8_2:52911263-52911282 | None:intergenic | 40.0% | |
| CACAGAATTAGGAACTACAG+TGG | - | chr8_2:52911290-52911309 | None:intergenic | 40.0% | |
| GCAGATACGTTCACAGAATT+AGG | - | chr8_2:52911301-52911320 | None:intergenic | 40.0% | |
| TGATTACTGATGGAGGAATC+TGG | - | chr8_2:52911385-52911404 | None:intergenic | 40.0% | |
| TGCACAAATCGAGTTCTTTG+CGG | - | chr8_2:52911584-52911603 | None:intergenic | 40.0% | |
| ACACATCTAACCTCTTGTGT+CGG | - | chr8_2:52911700-52911719 | None:intergenic | 40.0% | |
| GGATGTGTATTAACAGGTGA+AGG | - | chr8_2:52911806-52911825 | None:intergenic | 40.0% | |
| GTCTTATGTTCCTCTTCCTT+TGG | - | chr8_2:52911827-52911846 | None:intergenic | 40.0% | |
| ! | TCCGTACTTTTCTGATGTTG+AGG | + | chr8_2:52911949-52911968 | Msa1254750:CDS | 40.0% |
| CCCTCAACATCAGAAAAGTA+CGG | - | chr8_2:52911953-52911972 | None:intergenic | 40.0% | |
| ! | CCGTACTTTTCTGATGTTGA+GGG | + | chr8_2:52911950-52911969 | Msa1254750:CDS | 40.0% |
| ! | CTTTTCTGATGTTGAGGGAA+TGG | + | chr8_2:52911955-52911974 | Msa1254750:CDS | 40.0% |
| GCTTGCTCAGATTCTTGAAA+TGG | + | chr8_2:52912055-52912074 | Msa1254750:intron | 40.0% | |
| AGTTGCCTTGGTATCTTGAT+CGG | - | chr8_2:52912093-52912112 | None:intergenic | 40.0% | |
| AGAACTAAACCGTCCATTTC+TGG | - | chr8_2:52912284-52912303 | None:intergenic | 40.0% | |
| TTGGCTATCTAATGACAAGG+TGG | - | chr8_2:52912324-52912343 | None:intergenic | 40.0% | |
| ! | AGGTTGGCTATCTAATGACA+AGG | - | chr8_2:52912327-52912346 | None:intergenic | 40.0% |
| CATTGAGTTTGGCCATTTCT+AGG | + | chr8_2:52912598-52912617 | Msa1254750:intron | 40.0% | |
| AAGATTGGAGCAATCTTCTC+AGG | + | chr8_2:52912712-52912731 | Msa1254750:CDS | 40.0% | |
| GTGCACTTGCAGTATTGTAT+GGG | + | chr8_2:52912765-52912784 | Msa1254750:CDS | 40.0% | |
| CCGAGGTGCATTTATGAATT+TGG | + | chr8_2:52912816-52912835 | Msa1254750:intron | 40.0% | |
| TATGAGGTGGAAGGCAATAT+GGG | - | chr8_2:52912883-52912902 | None:intergenic | 40.0% | |
| ATATGAGGTGGAAGGCAATA+TGG | - | chr8_2:52912884-52912903 | None:intergenic | 40.0% | |
| ! | AATTTGTTTCCCGATTGGCA+AGG | - | chr8_2:52913014-52913033 | None:intergenic | 40.0% |
| CAACAACCATTGAAACTCCT+AGG | - | chr8_2:52913093-52913112 | None:intergenic | 40.0% | |
| AGGAGTTTCAATGGTTGTTG+AGG | + | chr8_2:52913093-52913112 | Msa1254750:intron | 40.0% | |
| GAACAAACACGACAAACTTC+TGG | - | chr8_2:52913300-52913319 | None:intergenic | 40.0% | |
| GTTTCTACCAATTCCTTGCA+TGG | + | chr8_2:52913480-52913499 | Msa1254750:intron | 40.0% | |
| !! | TACATATCTATTTTCGGGGG+AGG | + | chr8_2:52913541-52913560 | Msa1254750:intron | 40.0% |
| ! | TCTGCTACTACTTGCTAGAA+TGG | - | chr8_2:52913631-52913650 | None:intergenic | 40.0% |
| ! | TTTACCTATTTGGAGTGTGG+TGG | + | chr8_2:52913716-52913735 | Msa1254750:intron | 40.0% |
| ! | TTAATAAAGATGGCGGCAGA+TGG | + | chr8_2:52913941-52913960 | Msa1254750:CDS | 40.0% |
| GCATAAAGAATCTTGGCAAG+AGG | + | chr8_2:52913972-52913991 | Msa1254750:CDS | 40.0% | |
| AATGGCAAAGAAGTTCCTAC+AGG | + | chr8_2:52914007-52914026 | Msa1254750:CDS | 40.0% | |
| GAAAAGGAAATGCAGTTACC+TGG | - | chr8_2:52914066-52914085 | None:intergenic | 40.0% | |
| ATAGGAGTTACGTAGGGAAA+AGG | - | chr8_2:52914082-52914101 | None:intergenic | 40.0% | |
| !! | ACCTTGAGTGCGTATTGATT+TGG | + | chr8_2:52914133-52914152 | Msa1254750:intron | 40.0% |
| ACCAAATCAATACGCACTCA+AGG | - | chr8_2:52914137-52914156 | None:intergenic | 40.0% | |
| AAGGAACCTAGAGAGATAGA+AGG | + | chr8_2:52914244-52914263 | Msa1254750:CDS | 40.0% | |
| TGTCATCCTTCTATCTCTCT+AGG | - | chr8_2:52914253-52914272 | None:intergenic | 40.0% | |
| TATAAATGGCTGCTGCTCAA+TGG | + | chr8_2:52914433-52914452 | Msa1254750:three_prime_UTR | 40.0% | |
| ATAAATGGCTGCTGCTCAAT+GGG | + | chr8_2:52914434-52914453 | Msa1254750:three_prime_UTR | 40.0% | |
| ACTGCATGACAAAGGAAGTG+GGG | - | chr8_2:52909397-52909416 | None:intergenic | 45.0% | |
| GAACTGCATGACAAAGGAAG+TGG | - | chr8_2:52909399-52909418 | None:intergenic | 45.0% | |
| TCCTTTGTCATGCAGTTCAC+TGG | + | chr8_2:52909401-52909420 | Msa1254750:five_prime_UTR | 45.0% | |
| ACCAGTGAACTGCATGACAA+AGG | - | chr8_2:52909405-52909424 | None:intergenic | 45.0% | |
| TCCTTAAACTGACAGTGGTG+TGG | + | chr8_2:52909458-52909477 | Msa1254750:five_prime_UTR | 45.0% | |
| ACCACACCACTGTCAGTTTA+AGG | - | chr8_2:52909462-52909481 | None:intergenic | 45.0% | |
| AAACTGACAGTGGTGTGGTT+TGG | + | chr8_2:52909463-52909482 | Msa1254750:five_prime_UTR | 45.0% | |
| ! | TGGTGTGGTTTGGAAGTTTC+TGG | + | chr8_2:52909473-52909492 | Msa1254750:five_prime_UTR | 45.0% |
| CTACCCATGACTGGAAAAGA+AGG | - | chr8_2:52909507-52909526 | None:intergenic | 45.0% | |
| CGCAGAGCATAATTGAGTCT+AGG | - | chr8_2:52909662-52909681 | None:intergenic | 45.0% | |
| TGCTTAATTGCTGTGTAGGG+TGG | + | chr8_2:52910236-52910255 | Msa1254750:intron | 45.0% | |
| GGAGAAGGAAACAACACCTT+TGG | - | chr8_2:52910282-52910301 | None:intergenic | 45.0% | |
| !! | GTGTTGTTTCCTTCTCCCAA+AGG | + | chr8_2:52910285-52910304 | Msa1254750:CDS | 45.0% |
| ! | AACGGAATACCTTTGGGAGA+AGG | - | chr8_2:52910297-52910316 | None:intergenic | 45.0% |
| !! | CTCCCAAAGGTATTCCGTTA+CGG | + | chr8_2:52910298-52910317 | Msa1254750:CDS | 45.0% |
| CGTTGCCATGAACAATATGG+AGG | + | chr8_2:52910379-52910398 | Msa1254750:CDS | 45.0% | |
| GGCAACCTCCATATTGTTCA+TGG | - | chr8_2:52910387-52910406 | None:intergenic | 45.0% | |
| TCCTTGATTCCATCACCGTT+AGG | - | chr8_2:52910413-52910432 | None:intergenic | 45.0% | |
| AATCAAGGAAGCAGTCTCTG+TGG | + | chr8_2:52910424-52910443 | Msa1254750:CDS | 45.0% | |
| TGGGAATCAATTGGGGTTAG+TGG | + | chr8_2:52910706-52910725 | Msa1254750:CDS | 45.0% | |
| ! | GGGAATCAATTGGGGTTAGT+GGG | + | chr8_2:52910707-52910726 | Msa1254750:CDS | 45.0% |
| !! | AAGAGAGCGTCAGAAACATG+GGG | - | chr8_2:52910863-52910882 | None:intergenic | 45.0% |
| !! | GAAGAGAGCGTCAGAAACAT+GGG | - | chr8_2:52910864-52910883 | None:intergenic | 45.0% |
| !! | TGAAGAGAGCGTCAGAAACA+TGG | - | chr8_2:52910865-52910884 | None:intergenic | 45.0% |
| CGTTCTCCTTGTGACATTCA+AGG | + | chr8_2:52910986-52911005 | Msa1254750:CDS | 45.0% | |
| ! | TGTTGGTGAGTCTCAGAAGT+TGG | + | chr8_2:52911024-52911043 | Msa1254750:CDS | 45.0% |
| !! | TGCAGAAACACGACTTGCTA+TGG | + | chr8_2:52911048-52911067 | Msa1254750:CDS | 45.0% |
| !! | ACACGACTTGCTATGGCAAA+TGG | + | chr8_2:52911055-52911074 | Msa1254750:CDS | 45.0% |
| ACAACCTCTAACTCAGCAGA+CGG | - | chr8_2:52911082-52911101 | None:intergenic | 45.0% | |
| !!! | TCCGGTTTTGTTGCTGATTG+TGG | + | chr8_2:52911133-52911152 | Msa1254750:CDS | 45.0% |
| GGTTTCGGAGTCACAGAATT+AGG | - | chr8_2:52911334-52911353 | None:intergenic | 45.0% | |
| CATTCCTTCGAACTCTTCCT+TGG | + | chr8_2:52911477-52911496 | Msa1254750:CDS | 45.0% | |
| AAAGCCAAGGAAGAGTTCGA+AGG | - | chr8_2:52911484-52911503 | None:intergenic | 45.0% | |
| TTGAACTGACTGCAAAGCCA+AGG | - | chr8_2:52911497-52911516 | None:intergenic | 45.0% | |
| GCACAAATCGAGTTCTTTGC+GGG | - | chr8_2:52911583-52911602 | None:intergenic | 45.0% | |
| ACCATGAAGCATGCCTCATA+TGG | + | chr8_2:52911670-52911689 | Msa1254750:CDS | 45.0% | |
| TCCATATGAGGCATGCTTCA+TGG | - | chr8_2:52911674-52911693 | None:intergenic | 45.0% | |
| !! | TTGTGTCGGTTGTCCATATG+AGG | - | chr8_2:52911686-52911705 | None:intergenic | 45.0% |
| ATATGGACAACCGACACAAG+AGG | + | chr8_2:52911687-52911706 | Msa1254750:CDS | 45.0% | |
| TCCAACCGATCAAGATACCA+AGG | + | chr8_2:52912085-52912104 | Msa1254750:CDS | 45.0% | |
| AGTGTCAGGTGACATACCTT+CGG | - | chr8_2:52912117-52912136 | None:intergenic | 45.0% | |
| ! | TGACAACAGCCTTATGCAAC+AGG | - | chr8_2:52912196-52912215 | None:intergenic | 45.0% |
| TGCATAAGGCTGTTGTCATG+TGG | + | chr8_2:52912198-52912217 | Msa1254750:intron | 45.0% | |
| GCATAAGGCTGTTGTCATGT+GGG | + | chr8_2:52912199-52912218 | Msa1254750:intron | 45.0% | |
| GACAAGGTGGCCATAAGTTA+TGG | - | chr8_2:52912311-52912330 | None:intergenic | 45.0% | |
| CTAAGGCACAAGAGTAAGGT+TGG | - | chr8_2:52912343-52912362 | None:intergenic | 45.0% | |
| TGAGCTAAGGCACAAGAGTA+AGG | - | chr8_2:52912347-52912366 | None:intergenic | 45.0% | |
| GGTGCACTTGCAGTATTGTA+TGG | + | chr8_2:52912764-52912783 | Msa1254750:CDS | 45.0% | |
| ATTGTATGGGCGCACTATGA+AGG | + | chr8_2:52912778-52912797 | Msa1254750:CDS | 45.0% | |
| GTAGATCTAGGCACACACAA+AGG | - | chr8_2:52913234-52913253 | None:intergenic | 45.0% | |
| GGGTAGAATTGGGAAGGATT+TGG | + | chr8_2:52913566-52913585 | Msa1254750:intron | 45.0% | |
| AACACCACCACACTCCAAAT+AGG | - | chr8_2:52913723-52913742 | None:intergenic | 45.0% | |
| !!! | GGTGGTGTTGTGAGTGTTTT+TGG | + | chr8_2:52913734-52913753 | Msa1254750:intron | 45.0% |
| AAGTTCCTACAGGACAGATG+CGG | + | chr8_2:52914017-52914036 | Msa1254750:CDS | 45.0% | |
| GAGATCTGGTAGTTTGATCC+AGG | + | chr8_2:52914045-52914064 | Msa1254750:CDS | 45.0% | |
| TTACATGCAGATTAGGGCGT+TGG | + | chr8_2:52914168-52914187 | Msa1254750:intron | 45.0% | |
| TAAATGGCTGCTGCTCAATG+GGG | + | chr8_2:52914435-52914454 | Msa1254750:three_prime_UTR | 45.0% | |
| ACAAAGGAAGTGGGGAAGAG+AGG | - | chr8_2:52909389-52909408 | None:intergenic | 50.0% | |
| GACTCAATTATGCTCTGCGG+CGG | + | chr8_2:52909663-52909682 | Msa1254750:intron | 50.0% | |
| TGGAGCTTCACTGGAATCGT+TGG | + | chr8_2:52910256-52910275 | Msa1254750:CDS | 50.0% | |
| TCACTGGAATCGTTGGCCAA+AGG | + | chr8_2:52910263-52910282 | Msa1254750:CDS | 50.0% | |
| GCGCTCAGTCAATTCCGTAA+CGG | - | chr8_2:52910315-52910334 | None:intergenic | 50.0% | |
| TTACGGAATTGACTGAGCGC+TGG | + | chr8_2:52910315-52910334 | Msa1254750:CDS | 50.0% | |
| ATGGAGGTTGCCAAGCCTAA+CGG | + | chr8_2:52910395-52910414 | Msa1254750:CDS | 50.0% | |
| GATTCCATCACCGTTAGGCT+TGG | - | chr8_2:52910408-52910427 | None:intergenic | 50.0% | |
| !! | GCCTAACGGTGATGGAATCA+AGG | + | chr8_2:52910409-52910428 | Msa1254750:CDS | 50.0% |
| CTCTGTGGACCTTGGAATCA+AGG | + | chr8_2:52910439-52910458 | Msa1254750:CDS | 50.0% | |
| AGGCTGCTTCCTTGATTCCA+AGG | - | chr8_2:52910451-52910470 | None:intergenic | 50.0% | |
| AATCAAGGAAGCAGCCTCTG+TGG | + | chr8_2:52910454-52910473 | Msa1254750:CDS | 50.0% | |
| ! | GGTCTGAGTTTTCCTCTTCC+GGG | - | chr8_2:52910489-52910508 | None:intergenic | 50.0% |
| ! | GGGTCTGAGTTTTCCTCTTC+CGG | - | chr8_2:52910490-52910509 | None:intergenic | 50.0% |
| CGCGTAGTACTTCTTGCGAA+GGG | - | chr8_2:52910510-52910529 | None:intergenic | 50.0% | |
| TCGCGTAGTACTTCTTGCGA+AGG | - | chr8_2:52910511-52910530 | None:intergenic | 50.0% | |
| !! | GCAAGAAGTACTACGCGATG+CGG | + | chr8_2:52910513-52910532 | Msa1254750:CDS | 50.0% |
| ! | AATTGGGGTTAGTGGGAGCT+AGG | + | chr8_2:52910714-52910733 | Msa1254750:CDS | 50.0% |
| ! | ATTGGGGTTAGTGGGAGCTA+GGG | + | chr8_2:52910715-52910734 | Msa1254750:CDS | 50.0% |
| TGTCTCTGCACCTAACATGC+CGG | + | chr8_2:52910790-52910809 | Msa1254750:CDS | 50.0% | |
| GGGAATCGTCTCTTTCGACT+CGG | - | chr8_2:52910843-52910862 | None:intergenic | 50.0% | |
| TCCTTGTGACATTCAAGGCG+AGG | + | chr8_2:52910991-52911010 | Msa1254750:CDS | 50.0% | |
| TCCTCGCCTTGAATGTCACA+AGG | - | chr8_2:52910995-52911014 | None:intergenic | 50.0% | |
| GGCGAGGATATGTCTGTTGT+TGG | + | chr8_2:52911007-52911026 | Msa1254750:CDS | 50.0% | |
| GAATCACCATGACTGCTAGC+CGG | - | chr8_2:52911115-52911134 | None:intergenic | 50.0% | |
| GCTAGCAGTCATGGTGATTC+CGG | + | chr8_2:52911115-52911134 | Msa1254750:CDS | 50.0% | |
| ACATCCTCAATGCCATCGGT+CGG | - | chr8_2:52911259-52911278 | None:intergenic | 50.0% | |
| GCTTTGCAGTCAGTTCAACC+AGG | + | chr8_2:52911499-52911518 | Msa1254750:CDS | 50.0% | |
| ! | TTTTCGGTACAGCAGCAGCA+GGG | - | chr8_2:52911552-52911571 | None:intergenic | 50.0% |
| AGGTTAGATGTGTCCCTTGC+TGG | + | chr8_2:52911707-52911726 | Msa1254750:intron | 50.0% | |
| GCCTTGGTATCTTGATCGGT+TGG | - | chr8_2:52912089-52912108 | None:intergenic | 50.0% | |
| GATACCAAGGCAACTACCGA+AGG | + | chr8_2:52912098-52912117 | Msa1254750:CDS | 50.0% | |
| CATACCTTCGGTAGTTGCCT+TGG | - | chr8_2:52912105-52912124 | None:intergenic | 50.0% | |
| AAAGGGCCTCCTGTTGCATA+AGG | + | chr8_2:52912184-52912203 | Msa1254750:intron | 50.0% | |
| ! | CAACAGCCTTATGCAACAGG+AGG | - | chr8_2:52912193-52912212 | None:intergenic | 50.0% |
| GCTGTTGTCATGTGGGATCT+AGG | + | chr8_2:52912206-52912225 | Msa1254750:intron | 50.0% | |
| ATCCATGGCTCTTCGTGTCA+TGG | - | chr8_2:52912738-52912757 | None:intergenic | 50.0% | |
| GACATGCAAACATGCACCTC+AGG | - | chr8_2:52912928-52912947 | None:intergenic | 50.0% | |
| !! | AATGCCCTAGCCTTGCCAAT+CGG | + | chr8_2:52913001-52913020 | Msa1254750:intron | 50.0% |
| TTTCCCGATTGGCAAGGCTA+GGG | - | chr8_2:52913008-52913027 | None:intergenic | 50.0% | |
| !! | TTCTGGAGCAGCGCCAAATT+AGG | - | chr8_2:52913283-52913302 | None:intergenic | 50.0% |
| !! | TATCTATTTTCGGGGGAGGC+AGG | + | chr8_2:52913545-52913564 | Msa1254750:intron | 50.0% |
| !! | ATCTATTTTCGGGGGAGGCA+GGG | + | chr8_2:52913546-52913565 | Msa1254750:intron | 50.0% |
| AGTTCCTACAGGACAGATGC+GGG | + | chr8_2:52914018-52914037 | Msa1254750:CDS | 50.0% | |
| AAATGGCTGCTGCTCAATGG+GGG | + | chr8_2:52914436-52914455 | Msa1254750:three_prime_UTR | 50.0% | |
| GGAAGAGAGCTACCCATGAC+TGG | - | chr8_2:52909516-52909535 | None:intergenic | 55.0% | |
| TCATCGGAATTCCACGGAGG+AGG | - | chr8_2:52909552-52909571 | None:intergenic | 55.0% | |
| TCGTCATCGGAATTCCACGG+AGG | - | chr8_2:52909555-52909574 | None:intergenic | 55.0% | |
| ATACCTCAACGGCGCTCTTG+AGG | - | chr8_2:52909584-52909603 | None:intergenic | 55.0% | |
| TGTGTAGGGTGGAGCTTCAC+TGG | + | chr8_2:52910247-52910266 | Msa1254750:intron | 55.0% | |
| GTTGCCAAGCCTAACGGTGA+TGG | + | chr8_2:52910401-52910420 | Msa1254750:CDS | 55.0% | |
| GAAGCAGTCTCTGTGGACCT+TGG | + | chr8_2:52910431-52910450 | Msa1254750:CDS | 55.0% | |
| CCTCTGTGGATGTTACTGCC+CGG | + | chr8_2:52910468-52910487 | Msa1254750:CDS | 55.0% | |
| TGGATGTTACTGCCCGGAAG+AGG | + | chr8_2:52910474-52910493 | Msa1254750:CDS | 55.0% | |
| CTAGCATGGACCGGCATGTT+AGG | - | chr8_2:52910803-52910822 | None:intergenic | 55.0% | |
| TGGTCCGTCTGCTGAGTTAG+AGG | + | chr8_2:52911075-52911094 | Msa1254750:CDS | 55.0% | |
| !! | AGAGGTTGTTGCTGACTCGC+CGG | + | chr8_2:52911093-52911112 | Msa1254750:CDS | 55.0% |
| CATGCGCAGCACCAGATGAT+TGG | - | chr8_2:52911168-52911187 | None:intergenic | 55.0% | |
| !! | CAATCATCTGGTGCTGCGCA+TGG | + | chr8_2:52911166-52911185 | Msa1254750:CDS | 55.0% |
| ATCCTCAATGCCATCGGTCG+GGG | - | chr8_2:52911257-52911276 | None:intergenic | 55.0% | |
| CATCCTCAATGCCATCGGTC+GGG | - | chr8_2:52911258-52911277 | None:intergenic | 55.0% | |
| ! | GTTTTCGGTACAGCAGCAGC+AGG | - | chr8_2:52911553-52911572 | None:intergenic | 55.0% |
| CCTATGCAGAGGGTGAGCTA+AGG | - | chr8_2:52912360-52912379 | None:intergenic | 55.0% | |
| CCTTAGCTCACCCTCTGCAT+AGG | + | chr8_2:52912357-52912376 | Msa1254750:intron | 55.0% | |
| CGAAGAGCCATGGATTCTCG+CGG | + | chr8_2:52912743-52912762 | Msa1254750:CDS | 55.0% | |
| AAGTGCACCGCGAGAATCCA+TGG | - | chr8_2:52912753-52912772 | None:intergenic | 55.0% | |
| !! | ATGCCCTAGCCTTGCCAATC+GGG | + | chr8_2:52913002-52913021 | Msa1254750:intron | 55.0% |
| GTTTCCCGATTGGCAAGGCT+AGG | - | chr8_2:52913009-52913028 | None:intergenic | 55.0% | |
| GAGGCAGGGTAGAATTGGGA+AGG | + | chr8_2:52913560-52913579 | Msa1254750:intron | 55.0% | |
| GTTCCTACAGGACAGATGCG+GGG | + | chr8_2:52914019-52914038 | Msa1254750:CDS | 55.0% | |
| AATGGCTGCTGCTCAATGGG+GGG | + | chr8_2:52914437-52914456 | Msa1254750:three_prime_UTR | 55.0% | |
| GAATTCCACGGAGGAGGAGG+AGG | - | chr8_2:52909546-52909565 | None:intergenic | 60.0% | |
| TCGGAATTCCACGGAGGAGG+AGG | - | chr8_2:52909549-52909568 | None:intergenic | 60.0% | |
| !! | TGTCCTCAAGAGCGCCGTTG+AGG | + | chr8_2:52909578-52909597 | Msa1254750:CDS | 60.0% |
| CCGGGCAGTAACATCCACAG+AGG | - | chr8_2:52910471-52910490 | None:intergenic | 60.0% | |
| GCGGAAGAGACTTCGCACAG+AGG | + | chr8_2:52910532-52910551 | Msa1254750:CDS | 60.0% | |
| TCAATGCCATCGGTCGGGGA+CGG | - | chr8_2:52911253-52911272 | None:intergenic | 60.0% | |
| GGCCATGACACGAAGAGCCA+TGG | + | chr8_2:52912733-52912752 | Msa1254750:CDS | 60.0% | |
| GGGGGAGGCAGGGTAGAATT+GGG | + | chr8_2:52913556-52913575 | Msa1254750:intron | 60.0% | |
| AGACCCCGCATCTGTCCTGT+AGG | - | chr8_2:52914025-52914044 | None:intergenic | 60.0% | |
| ! | CAGATGCGGGGTCTGAGATC+TGG | + | chr8_2:52914031-52914050 | Msa1254750:CDS | 60.0% |
| GGAGGAGGAGGAGGAGGAGA+GGG | - | chr8_2:52909537-52909556 | None:intergenic | 65.0% | |
| TTCCACGGAGGAGGAGGAGG+AGG | - | chr8_2:52909543-52909562 | None:intergenic | 65.0% | |
| ! | GGGGTTAGTGGGAGCTAGGG+CGG | + | chr8_2:52910718-52910737 | Msa1254750:CDS | 65.0% |
| ! | GGGTTAGTGGGAGCTAGGGC+GGG | + | chr8_2:52910719-52910738 | Msa1254750:CDS | 65.0% |
| GGTTAGTGGGAGCTAGGGCG+GGG | + | chr8_2:52910720-52910739 | Msa1254750:CDS | 65.0% | |
| ! | GACTCGCCGGCTAGCAGTCA+TGG | + | chr8_2:52911106-52911125 | Msa1254750:CDS | 65.0% |
| CAATGCCATCGGTCGGGGAC+GGG | - | chr8_2:52911252-52911271 | None:intergenic | 65.0% | |
| GTCCCCGACCGATGGCATTG+AGG | + | chr8_2:52911252-52911271 | Msa1254750:CDS | 65.0% | |
| CGGGGGAGGCAGGGTAGAAT+TGG | + | chr8_2:52913555-52913574 | Msa1254750:intron | 65.0% | |
| CGGAGGAGGAGGAGGAGGAG+AGG | - | chr8_2:52909538-52909557 | None:intergenic | 70.0% | |
| CTCCTCCTCCTCCTCCTCCG+TGG | + | chr8_2:52909538-52909557 | Msa1254750:CDS | 70.0% | |
| AGTGTCCCGTCCCCGACCGA+TGG | + | chr8_2:52911244-52911263 | Msa1254750:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 52909364 | 52914587 | 52909364 | ID=Msa1254750;Name=Msa1254750 |
| chr8_2 | mRNA | 52909364 | 52914587 | 52909364 | ID=Msa1254750-mRNA-1;Parent=Msa1254750;Name=Msa1254750-mRNA-1;_AED=0.10;_eAED=0.10;_QI=155|1|1|1|1|1|8|317|746 |
| chr8_2 | exon | 52909364 | 52909599 | 52909364 | ID=Msa1254750-mRNA-1:exon:16304;Parent=Msa1254750-mRNA-1 |
| chr8_2 | exon | 52910254 | 52911708 | 52910254 | ID=Msa1254750-mRNA-1:exon:16305;Parent=Msa1254750-mRNA-1 |
| chr8_2 | exon | 52911788 | 52911976 | 52911788 | ID=Msa1254750-mRNA-1:exon:16306;Parent=Msa1254750-mRNA-1 |
| chr8_2 | exon | 52912065 | 52912119 | 52912065 | ID=Msa1254750-mRNA-1:exon:16307;Parent=Msa1254750-mRNA-1 |
| chr8_2 | exon | 52912672 | 52912820 | 52912672 | ID=Msa1254750-mRNA-1:exon:16308;Parent=Msa1254750-mRNA-1 |
| chr8_2 | exon | 52913371 | 52913460 | 52913371 | ID=Msa1254750-mRNA-1:exon:16309;Parent=Msa1254750-mRNA-1 |
| chr8_2 | exon | 52913938 | 52914066 | 52913938 | ID=Msa1254750-mRNA-1:exon:16310;Parent=Msa1254750-mRNA-1 |
| chr8_2 | exon | 52914178 | 52914587 | 52914178 | ID=Msa1254750-mRNA-1:exon:16311;Parent=Msa1254750-mRNA-1 |
| chr8_2 | five_prime_UTR | 52909364 | 52909518 | 52909364 | ID=Msa1254750-mRNA-1:five_prime_utr;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52909519 | 52909599 | 52909519 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52910254 | 52911708 | 52910254 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52911788 | 52911976 | 52911788 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52912065 | 52912119 | 52912065 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52912672 | 52912820 | 52912672 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52913371 | 52913460 | 52913371 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52913938 | 52914066 | 52913938 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | CDS | 52914178 | 52914270 | 52914178 | ID=Msa1254750-mRNA-1:cds;Parent=Msa1254750-mRNA-1 |
| chr8_2 | three_prime_UTR | 52914271 | 52914587 | 52914271 | ID=Msa1254750-mRNA-1:three_prime_utr;Parent=Msa1254750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
