AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1090330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1090330 MtrunA17_Chr3g0119761 76.800 125 14 1 86 210 22 131 6.51e-59 181
Msa1090330 MtrunA17_Chr1g0211691 69.565 92 21 1 119 210 811 895 5.29e-33 125
Msa1090330 MtrunA17_Chr1g0211711 82.667 75 12 1 136 210 816 889 3.29e-32 122
Msa1090330 MtrunA17_Chr5g0420361 68.000 75 24 0 136 210 548 622 2.31e-26 105
Msa1090330 MtrunA17_Chr1g0183311 58.696 92 31 1 119 210 611 695 1.48e-24 100
Msa1090330 MtrunA17_Chr5g0426961 60.526 76 23 1 119 194 607 675 1.56e-18 83.6
Msa1090330 MtrunA17_Chr7g0231061 53.425 73 27 1 119 191 111 176 1.21e-15 72.4
Msa1090330 MtrunA17_Chr1g0211661 48.810 84 32 2 119 202 691 763 8.84e-15 72.4
Msa1090330 MtrunA17_Chr6g0472441 55.263 76 18 2 136 210 484 544 1.89e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 169 sgRNAs with CRISPR-Local

Find 941 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGAATTTACTTATTT+TGG 0.068037 7_3:-4297723 Msa1090330:three_prime_UTR
ACATAATATTTGAACCTATT+TGG 0.165996 7_3:-4287818 Msa1090330:three_prime_UTR
TTTCTCGTCTGAAGAATTTA+TGG 0.180309 7_3:+4302204 None:intergenic
GGGTTACATGTTTGATAAAT+TGG 0.217858 7_3:-4287878 Msa1090330:three_prime_UTR
TGGGACACCTTGTATCTAAA+AGG 0.219415 7_3:-4288886 Msa1090330:three_prime_UTR
TAGGTTCTAAATTTGAAATT+TGG 0.240898 7_3:-4293943 Msa1090330:three_prime_UTR
TTCGGTAATTATAAAGTATT+AGG 0.259457 7_3:-4287788 Msa1090330:three_prime_UTR
GTTGGATTCAGATGATAAAT+AGG 0.265185 7_3:+4288079 None:intergenic
GTCAAGAGATCTTTCAAGTT+TGG 0.275038 7_3:-4289120 Msa1090330:three_prime_UTR
TCATAGACCATTGTAGTTTC+AGG 0.286390 7_3:+4298509 None:intergenic
AAGGAGGAATGAAGGGTAGT+AGG 0.293863 7_3:+4303929 None:intergenic
GAACTTCCTTGTTGCTGAAT+CGG 0.301153 7_3:+4293972 None:intergenic
AAATACATGACGATGGATAA+TGG 0.308787 7_3:-4293729 Msa1090330:three_prime_UTR
AACTTCCTTGTTGCTGAATC+GGG 0.309232 7_3:+4293973 None:intergenic
TACAATTCGCCAACTTTCAT+TGG 0.311032 7_3:-4288906 Msa1090330:three_prime_UTR
AACCGAATACAAAACTAAAT+AGG 0.312099 7_3:+4287667 None:intergenic
GAATCTCAAAAGGGTGTAAT+AGG 0.312682 7_3:-4297920 Msa1090330:three_prime_UTR
GTGTGTGGCTTCATCTAAAA+TGG 0.314843 7_3:-4293609 Msa1090330:three_prime_UTR
AACTTTATCTGCGACTGTTT+TGG 0.316634 7_3:-4288951 Msa1090330:three_prime_UTR
TACCGAATTTAAAACCAAAT+AGG 0.323650 7_3:+4287804 None:intergenic
AACAATTGAAGCGCTAAATC+TGG 0.325658 7_3:-4303822 Msa1090330:CDS
GTAAAACCAATTGAATGTTC+TGG 0.344357 7_3:+4303985 None:intergenic
AACCGTGAGTGTAACTAAAT+AGG 0.356359 7_3:+4288761 None:intergenic
AAAATAAATAATCATGTTGC+TGG 0.356483 7_3:-4304023 None:intergenic
ATGGTTCCAAGCGTGACATT+AGG 0.359515 7_3:-4293767 Msa1090330:three_prime_UTR
TCTCCAAAATAAGTAAATTC+TGG 0.362321 7_3:+4297720 None:intergenic
TGGTTCCAAGCGTGACATTA+GGG 0.364051 7_3:-4293766 Msa1090330:three_prime_UTR
AGGAGGAATGAAGGGTAGTA+GGG 0.367757 7_3:+4303930 None:intergenic
AATACATGACGATGGATAAT+GGG 0.374168 7_3:-4293728 Msa1090330:three_prime_UTR
AGCGCTAAATCTGGGTGATT+TGG 0.376838 7_3:-4303813 Msa1090330:CDS
TCAAAACTAGATCCTTCAAC+AGG 0.378708 7_3:+4293578 None:intergenic
GAAGCATTTCAGAAGAGTTC+AGG 0.380408 7_3:-4302168 Msa1090330:three_prime_UTR
TTTCAAGCAGAAGAATGTTC+TGG 0.381610 7_3:-4293866 Msa1090330:three_prime_UTR
GCATTGTCTTCCTACATTGT+TGG 0.387969 7_3:+4288061 None:intergenic
AATAAGAGAAGGAGGAATGA+AGG 0.394155 7_3:+4303921 None:intergenic
TAGGAAGACAATGCATCAAA+TGG 0.400920 7_3:-4288052 Msa1090330:three_prime_UTR
ATACAAAGCTTCTTTATTGA+CGG 0.409686 7_3:-4288023 Msa1090330:three_prime_UTR
GATAAATTGGAAGTTTGAAC+TGG 0.414196 7_3:-4287865 Msa1090330:three_prime_UTR
TTCAATATGCAGTCTTATCA+AGG 0.421472 7_3:-4287992 Msa1090330:three_prime_UTR
GATTCTCCAGAACATTCAAT+TGG 0.425553 7_3:-4303991 Msa1090330:CDS
GGTGCTACATGGTGATAATC+AGG 0.426928 7_3:-4302269 Msa1090330:CDS
CACCTTGAAACCGCGATCCT+TGG 0.431343 7_3:+4293906 None:intergenic
AAATATTATGTTATGCATCA+AGG 0.435058 7_3:+4287830 None:intergenic
ATCTCAGCGCGCAAGGTCCT+AGG 0.435679 7_3:-4303547 Msa1090330:CDS
CTATGAAACTTGTTGTTGAA+TGG 0.436799 7_3:-4298492 Msa1090330:three_prime_UTR
TTGTGTGCAGGAATCTCAAA+AGG 0.437894 7_3:-4297930 Msa1090330:intron
AAGAGAGTCACTAAAATTCA+AGG 0.442926 7_3:+4288237 None:intergenic
ATCATACAAAAGCAAATTCA+AGG 0.445622 7_3:-4288688 Msa1090330:three_prime_UTR
GAAAGTTCTACAAGGCAACT+TGG 0.449663 7_3:-4293841 Msa1090330:three_prime_UTR
AAAGAATAATCAGCCACAAT+TGG 0.453496 7_3:-4293521 Msa1090330:three_prime_UTR
TGGGGATAACATTGGTCAAA+AGG 0.454960 7_3:-4293821 Msa1090330:three_prime_UTR
ACATTCTTCTGCTTGAAACT+AGG 0.456561 7_3:+4293871 None:intergenic
AAAGTTCTACAAGGCAACTT+GGG 0.465977 7_3:-4293840 Msa1090330:three_prime_UTR
TATGTAGATCATGTTCAGTT+AGG 0.466456 7_3:+4293341 None:intergenic
TTCACCGTACAAACAATTCA+AGG 0.468525 7_3:-4303591 Msa1090330:CDS
ACAATTCGCCAACTTTCATT+GGG 0.468607 7_3:-4288905 Msa1090330:three_prime_UTR
AAACTTGACACTGATGCATC+TGG 0.469022 7_3:+4293370 None:intergenic
TGATGCCTTTGAAAGTCATA+AGG 0.471406 7_3:+4298538 None:intergenic
TAATAATTACTAATGTAGTA+AGG 0.472023 7_3:-4288154 Msa1090330:three_prime_UTR
AAAACTATTATAGAGGTGGT+TGG 0.473044 7_3:-4294085 Msa1090330:three_prime_UTR
TGTCTTACATGTGGCGATGT+AGG 0.476362 7_3:-4293031 Msa1090330:three_prime_UTR
AACTGAACTTGACTTTGCAT+TGG 0.476913 7_3:+4293671 None:intergenic
CAATTGGTGAATGCTTCAAC+AGG 0.476955 7_3:-4293505 Msa1090330:three_prime_UTR
AGAGACAGCTAAGTTGCCTC+AGG 0.477807 7_3:-4293188 Msa1090330:intron
TTGAAATTTGGAGATTATGC+TGG 0.486444 7_3:-4293931 Msa1090330:three_prime_UTR
TGCAAGAACTCGGCTACGGC+GGG 0.488925 7_3:-4303521 Msa1090330:CDS
CACGGTTATAGTCACATAAG+AGG 0.495209 7_3:-4288745 Msa1090330:three_prime_UTR
CCTGGATTAAAACAACCATC+AGG 0.495537 7_3:-4293632 Msa1090330:three_prime_UTR
TGCCAAGGATCGCGGTTTCA+AGG 0.495555 7_3:-4293908 Msa1090330:three_prime_UTR
ACATAAGAGGAAGCAAGAGC+TGG 0.497961 7_3:-4288732 Msa1090330:three_prime_UTR
TGCAGAGATAAGTTGTCAAT+CGG 0.499359 7_3:-4293242 Msa1090330:three_prime_UTR
TAGCATCAAACCTTATTCAA+TGG 0.504256 7_3:+4288647 None:intergenic
AAGATGCTAATTAGCTACTA+AGG 0.505530 7_3:+4297892 None:intergenic
AACAGTCGTGCACAGGATGA+TGG 0.506773 7_3:-4293786 Msa1090330:three_prime_UTR
TAATGCCGTTGAATGATGAT+AGG 0.510919 7_3:-4294057 Msa1090330:three_prime_UTR
ATGGCATCAATCCCTGTTGA+AGG 0.511007 7_3:-4293590 Msa1090330:three_prime_UTR
ATAAGAGAAGGAGGAATGAA+GGG 0.513042 7_3:+4303922 None:intergenic
TCAAATTTAGAACCTACAGC+TGG 0.513724 7_3:+4293950 None:intergenic
GCAAGAGCATCAATCTCCAC+TGG 0.514196 7_3:+4293289 None:intergenic
ATCATGTTGCTGGGTACTCT+CGG 0.518619 7_3:-4304013 Msa1090330:CDS
TTGTCAATCGGAAGTGGAGA+TGG 0.519404 7_3:-4293230 Msa1090330:three_prime_UTR
AATTGAGAAATAAGAGAAGG+AGG 0.522594 7_3:+4303913 None:intergenic
GATAAGTTGTCAATCGGAAG+TGG 0.524889 7_3:-4293236 Msa1090330:three_prime_UTR
GGCTCCCCTAATGTCACGCT+TGG 0.526509 7_3:+4293761 None:intergenic
GGGACACCTTGTATCTAAAA+GGG 0.527015 7_3:-4288885 Msa1090330:intron
AGGAAGACAATGCATCAAAT+GGG 0.527537 7_3:-4288051 Msa1090330:three_prime_UTR
AATATTATGTTATGCATCAA+GGG 0.534580 7_3:+4287831 None:intergenic
GCACCCTCTTGTCTTGCTCA+AGG 0.536107 7_3:+4302287 None:intergenic
TCTAATATGACAGACCCTGC+TGG 0.537237 7_3:-4293481 Msa1090330:three_prime_UTR
ACAATTGAAGCGCTAAATCT+GGG 0.537239 7_3:-4303821 Msa1090330:CDS
GTAAAGCTTGTGCACTGCAT+AGG 0.540182 7_3:-4292976 Msa1090330:intron
TCCTAGGGTTTGCAAGAACT+CGG 0.540523 7_3:-4303531 Msa1090330:CDS
GACATCCTTATGACTTTCAA+AGG 0.540571 7_3:-4298543 Msa1090330:three_prime_UTR
GAAAATTGAGAAATAAGAGA+AGG 0.541773 7_3:+4303910 None:intergenic
TCATCTGAATCCAACAATGT+AGG 0.544444 7_3:-4288071 Msa1090330:three_prime_UTR
GATTACCACTTACAAAATCA+AGG 0.544502 7_3:-4297699 Msa1090330:intron
GGCAATTCGATGATTTCAGT+CGG 0.548679 7_3:-4294036 Msa1090330:three_prime_UTR
TTTCAAAACTATTATAGAGG+TGG 0.551598 7_3:-4294089 Msa1090330:three_prime_UTR
AGCTCAACCATGGAGTTTAG+CGG 0.551609 7_3:-4299118 Msa1090330:three_prime_UTR
GCAATTCGATGATTTCAGTC+GGG 0.552297 7_3:-4294035 Msa1090330:three_prime_UTR
TTAGTCATATTAGAACCAGC+AGG 0.552780 7_3:+4293466 None:intergenic
CAAGGTGTCCCAATGAAAGT+TGG 0.554413 7_3:+4288897 None:intergenic
TCTCAGCGCGCAAGGTCCTA+GGG 0.559527 7_3:-4303546 Msa1090330:CDS
AAAGTGAGCTTACATGATGA+AGG 0.561482 7_3:+4299084 None:intergenic
AAGAAAATACTTTGCTGCAG+AGG 0.562763 7_3:+4288108 None:intergenic
GTTGAAGCATTCACCAATTG+TGG 0.562816 7_3:+4293508 None:intergenic
GTCACTTTCAAGCTCAACCA+TGG 0.563416 7_3:-4299128 Msa1090330:three_prime_UTR
GAAGTGAAATTGAACTCTGA+TGG 0.566558 7_3:-4302343 Msa1090330:CDS
TGAACATGAAGTGTGAGAGA+TGG 0.569037 7_3:+4303860 None:intergenic
CGTCATGTATTTATCTCATG+TGG 0.570168 7_3:+4293740 None:intergenic
TATGTATAACAGTCGTGCAC+AGG 0.572185 7_3:-4293793 Msa1090330:three_prime_UTR
AAATAAATAATCATGTTGCT+GGG 0.572702 7_3:-4304022 None:intergenic
TTCCTATTTAGTTACACTCA+CGG 0.574912 7_3:-4288763 Msa1090330:three_prime_UTR
TTGAATCAGATAACAAACCT+TGG 0.575230 7_3:-4297857 Msa1090330:intron
CAAGACAAGAGGGTGCTACA+TGG 0.575858 7_3:-4302280 Msa1090330:CDS
CCACTGCTCTCCTTTAAAGC+AGG 0.579600 7_3:-4302140 Msa1090330:intron
ACTGGAGCTTCCGATACTTG+AGG 0.579857 7_3:+4293307 None:intergenic
ACTTCCTTGTTGCTGAATCG+GGG 0.580257 7_3:+4293974 None:intergenic
TGGAGATTATGCTGGTGCCA+AGG 0.580644 7_3:-4293923 Msa1090330:three_prime_UTR
TGAAGTTGAACCTCAAGTAT+CGG 0.581112 7_3:-4293317 Msa1090330:three_prime_UTR
TTGACCTTGAATTGTTTGTA+CGG 0.583693 7_3:+4303587 None:intergenic
AGATCTGCCGCTAAACTCCA+TGG 0.584643 7_3:+4299111 None:intergenic
TTGCAAGAACTCGGCTACGG+CGG 0.586253 7_3:-4303522 Msa1090330:CDS
CAACTTAGCTGTCTCTGACT+CGG 0.587029 7_3:+4293195 None:intergenic
CTATTTCTAACTGATTCGAA+TGG 0.587342 7_3:-4298449 Msa1090330:intron
GCACCTTGAGCAAGACAAGA+GGG 0.592480 7_3:-4302290 Msa1090330:CDS
TTGGTAGAATTGAGTTTGGG+AGG 0.595529 7_3:-4303658 Msa1090330:intron
TCAAGTATCGGAAGCTCCAG+TGG 0.598462 7_3:-4293305 Msa1090330:three_prime_UTR
TCTTGAAATCTCAGCGCGCA+AGG 0.599323 7_3:-4303554 Msa1090330:CDS
CACTGATGCATCTGGCGGTG+CGG 0.604862 7_3:+4293378 None:intergenic
TTTGAAGCGCTAGACTCGCT+CGG 0.606775 7_3:+4303617 None:intergenic
AGCTCCCCGATTCAGCAACA+AGG 0.608377 7_3:-4293978 Msa1090330:three_prime_UTR
AAAACAACCATCAGGGTGTG+TGG 0.612294 7_3:-4293624 Msa1090330:three_prime_UTR
CAAAACTAGATCCTTCAACA+GGG 0.613617 7_3:+4293579 None:intergenic
CCTGCTTTAAAGGAGAGCAG+TGG 0.616732 7_3:+4302140 None:intergenic
TTCTGGCTGAAAGTTCTACA+AGG 0.619073 7_3:-4293849 Msa1090330:three_prime_UTR
CCAAAATAAGTAAATTCTGG+AGG 0.619991 7_3:+4297723 None:intergenic
TATGCTGGTGCCAAGGATCG+CGG 0.620538 7_3:-4293916 Msa1090330:three_prime_UTR
GATGAAGCCACACACCCTGA+TGG 0.621745 7_3:+4293617 None:intergenic
TCAATTTCTTAATGGCAGCA+AGG 0.626798 7_3:+4302320 None:intergenic
TTAAATCTAGTCCAAAGACC+TGG 0.626898 7_3:-4293650 Msa1090330:three_prime_UTR
CTACATGGTGATAATCAGGA+TGG 0.630222 7_3:-4302265 Msa1090330:CDS
AGCACCTTGAGCAAGACAAG+AGG 0.633713 7_3:-4302291 Msa1090330:CDS
GCCGAGTTCTTGCAAACCCT+AGG 0.636535 7_3:+4303530 None:intergenic
TGTGTGCAGGAATCTCAAAA+GGG 0.637356 7_3:-4297929 Msa1090330:intron
ATACATGACGATGGATAATG+GGG 0.639350 7_3:-4293727 Msa1090330:three_prime_UTR
GGTTTGCAAGAACTCGGCTA+CGG 0.640660 7_3:-4303525 Msa1090330:CDS
TGTAGGCTTTGAAGAGACGT+TGG 0.640799 7_3:-4293014 Msa1090330:three_prime_UTR
AATTGCCTATCATCATTCAA+CGG 0.641039 7_3:+4294052 None:intergenic
ATGAGATAAATACATGACGA+TGG 0.642316 7_3:-4293736 Msa1090330:three_prime_UTR
AAGTTCTACAAGGCAACTTG+GGG 0.642391 7_3:-4293839 Msa1090330:three_prime_UTR
AACGTTGCCTGAAACTACAA+TGG 0.642558 7_3:-4298516 Msa1090330:three_prime_UTR
TCTGGCGGTGCGGATGCAAG+TGG 0.645216 7_3:+4293388 None:intergenic
TCGGGAACCATTGAACTACA+AGG 0.645879 7_3:-4294017 Msa1090330:three_prime_UTR
AACAAGGAAGTTCCAGCTGT+AGG 0.646193 7_3:-4293962 Msa1090330:three_prime_UTR
CTTGAAATCATGAAAACATG+AGG 0.646444 7_3:-4293694 Msa1090330:three_prime_UTR
GGAGATTGATGCTCTTGCAG+AGG 0.647925 7_3:-4293284 Msa1090330:three_prime_UTR
TAGTCATATTAGAACCAGCA+GGG 0.651331 7_3:+4293467 None:intergenic
AGGCAACTTGGGGATAACAT+TGG 0.652222 7_3:-4293829 Msa1090330:three_prime_UTR
TACTGCATCAGACATATCAC+AGG 0.653286 7_3:+4302822 None:intergenic
GGTTCCAAGCGTGACATTAG+GGG 0.666584 7_3:-4293765 Msa1090330:three_prime_UTR
ATACATGTCTGTCTTACATG+TGG 0.668449 7_3:-4293040 Msa1090330:three_prime_UTR
ATCTGATTCAAGCTGCAGAG+TGG 0.677129 7_3:+4297869 None:intergenic
CTGGATTAAAACAACCATCA+GGG 0.680238 7_3:-4293631 Msa1090330:three_prime_UTR
ATTATCAAGCATGTCAACAG+TGG 0.685664 7_3:+4302237 None:intergenic
CTTGACACTGATGCATCTGG+CGG 0.686581 7_3:+4293373 None:intergenic
TATGCATCAAGGGACATCGA+CGG 0.697608 7_3:+4287841 None:intergenic
CAAGGATCGCGGTTTCAAGG+TGG 0.714835 7_3:-4293905 Msa1090330:three_prime_UTR
AGCACATTATGTTCACACCG+AGG 0.784095 7_3:+4288301 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAAGAATGTTT+AGG - chr7_3:4290565-4290584 Msa1090330:intron 10.0%
!!! CATTTTAATTACAATAAATA+TGG - chr7_3:4291390-4291409 Msa1090330:intron 10.0%
!!! AGAAAAGTATATTAATTTTT+GGG - chr7_3:4291588-4291607 Msa1090330:intron 10.0%
!!! GTTAAAAGTATATTAATTTT+TGG - chr7_3:4291610-4291629 Msa1090330:intron 10.0%
!!! AAATATCAAATAATAGATTT+TGG - chr7_3:4292685-4292704 Msa1090330:intron 10.0%
!! AAAAAAAATAAAGTTTGATA+TGG - chr7_3:4292948-4292967 Msa1090330:intron 10.0%
!!! CTGTTTTTTTTTTTTTTTTT+TGG - chr7_3:4293521-4293540 Msa1090330:three_prime_UTR 10.0%
!! TTTAAATTCTATTATCAATA+GGG + chr7_3:4295424-4295443 None:intergenic 10.0%
!!! TTATTTTAAATTTTGTTCTT+TGG - chr7_3:4295860-4295879 Msa1090330:intron 10.0%
!! AAATTATGAATATTTCAAAA+CGG + chr7_3:4297114-4297133 None:intergenic 10.0%
!!! TAACAATTTTATAATAAACT+AGG + chr7_3:4302058-4302077 None:intergenic 10.0%
!!! TTATGAATGATATTTTTTAA+TGG - chr7_3:4303299-4303318 Msa1090330:intron 10.0%
!! ATTAGTTGAATCATTATATA+AGG - chr7_3:4289070-4289089 Msa1090330:intron 15.0%
!! GAAAGATTAAATAAAATAGT+TGG + chr7_3:4291518-4291537 None:intergenic 15.0%
!!! CAGAAAAGTATATTAATTTT+TGG - chr7_3:4291587-4291606 Msa1090330:intron 15.0%
!!! ATTTTATCTCCTTAAAAAAA+TGG - chr7_3:4291783-4291802 Msa1090330:intron 15.0%
!! TAAAATTAAACGAGAAAAAA+TGG + chr7_3:4291848-4291867 None:intergenic 15.0%
!! TACATATCATAAACAAATAT+TGG + chr7_3:4292772-4292791 None:intergenic 15.0%
!!! TCTTTATGAAGAATTTTTTT+TGG - chr7_3:4292829-4292848 Msa1090330:intron 15.0%
!!! AATGTATTATGAACATTTTT+AGG - chr7_3:4293081-4293100 Msa1090330:intron 15.0%
!! ATATTGGATTATAAAATCAA+AGG - chr7_3:4293627-4293646 Msa1090330:three_prime_UTR 15.0%
!!! AAAAGTGAATTTTAAGTTAT+AGG + chr7_3:4293697-4293716 None:intergenic 15.0%
!! AATAATTCTAATCGAAATAA+TGG - chr7_3:4294275-4294294 Msa1090330:intron 15.0%
!! AATTGAAATACATGTTTATT+AGG + chr7_3:4294336-4294355 None:intergenic 15.0%
!! ACCTTCAATAAAATAAAATA+AGG - chr7_3:4294524-4294543 Msa1090330:intron 15.0%
!!! TCCTTATTTTATTTTATTGA+AGG + chr7_3:4294528-4294547 None:intergenic 15.0%
!!! CACTTAATTTTTTTGATAAT+TGG - chr7_3:4294548-4294567 Msa1090330:intron 15.0%
!!! CTTTTTAACATATCATTTTA+TGG + chr7_3:4295131-4295150 None:intergenic 15.0%
!! GTTTAAATTCTATTATCAAT+AGG + chr7_3:4295425-4295444 None:intergenic 15.0%
!!! TCTAAAATTTTCTTATATGT+TGG - chr7_3:4296534-4296553 Msa1090330:intron 15.0%
!! TGATATTAAAGGTTAAATAT+AGG - chr7_3:4297059-4297078 Msa1090330:intron 15.0%
!! GATATTAAAGGTTAAATATA+GGG - chr7_3:4297060-4297079 Msa1090330:intron 15.0%
!!! TACTAATTTTGTTGTTATTT+TGG - chr7_3:4297178-4297197 Msa1090330:intron 15.0%
!!! ACTAATTTTGTTGTTATTTT+GGG - chr7_3:4297179-4297198 Msa1090330:intron 15.0%
!! GGTATATATAATTATTCTAA+TGG - chr7_3:4297363-4297382 Msa1090330:intron 15.0%
!!! TGTATCATTTTAATATTCTT+TGG + chr7_3:4298818-4298837 None:intergenic 15.0%
!! ATCTTATATATTAGTTAAGA+TGG - chr7_3:4298913-4298932 Msa1090330:intron 15.0%
!! TTACCAAATTTAAAAGAAAT+TGG + chr7_3:4301521-4301540 None:intergenic 15.0%
!! TTTAAATTTGGTAAATAGAA+AGG - chr7_3:4299982-4300001 Msa1090330:intron 15.0%
!! AAATATCATATTTCACATAA+AGG + chr7_3:4301780-4301799 None:intergenic 15.0%
!!! AACCTATTTTGTTTTAAATT+TGG - chr7_3:4301801-4301820 Msa1090330:intron 15.0%
!!! TACCAAATTTAAAACAAAAT+AGG + chr7_3:4301806-4301825 None:intergenic 15.0%
!!! AATGCTAAAATTTCATTTTT+GGG + chr7_3:4301882-4301901 None:intergenic 15.0%
!!! AAATGCTAAAATTTCATTTT+TGG + chr7_3:4301883-4301902 None:intergenic 15.0%
!!! AAATGAAATTTTAGCATTTA+TGG - chr7_3:4301884-4301903 Msa1090330:intron 15.0%
!! ATAGTTAGAAATTTGATAAA+TGG - chr7_3:4302233-4302252 Msa1090330:CDS 15.0%
!! TAGTTAGAAATTTGATAAAT+GGG - chr7_3:4302234-4302253 Msa1090330:CDS 15.0%
!!! TTCAAAGTACTTTTAAATTT+GGG + chr7_3:4303123-4303142 None:intergenic 15.0%
!!! ATTCAAAGTACTTTTAAATT+TGG + chr7_3:4303124-4303143 None:intergenic 15.0%
!!! GTTTAAAATTTTGAATAAGT+AGG - chr7_3:4303242-4303261 Msa1090330:intron 15.0%
!! TAATAATTACTAATGTAGTA+AGG - chr7_3:4303507-4303526 Msa1090330:intron 15.0%
!!! TTATTGATGATAGTTGTTAA+GGG - chr7_3:4287897-4287916 Msa1090330:three_prime_UTR 20.0%
!! AAAACGGAATAAAATGAATT+CGG - chr7_3:4287922-4287941 Msa1090330:three_prime_UTR 20.0%
!! AAGATTCAAAATCATAGAAT+GGG + chr7_3:4288240-4288259 None:intergenic 20.0%
!! CAAAATCAGAATTGATAAAA+AGG + chr7_3:4288341-4288360 None:intergenic 20.0%
!!! TTTATCAATTCTGATTTTGT+TGG - chr7_3:4288342-4288361 Msa1090330:intron 20.0%
!!! TTATCAATTCTGATTTTGTT+GGG - chr7_3:4288343-4288362 Msa1090330:intron 20.0%
!!! GTTATATGTAATTGTGTTTT+TGG - chr7_3:4288380-4288399 Msa1090330:intron 20.0%
!!! AAACTTGTTTCTTTTGTAAT+TGG - chr7_3:4289263-4289282 Msa1090330:intron 20.0%
!!! CTTTTGTATCAATTTCTTAA+TGG + chr7_3:4289352-4289371 None:intergenic 20.0%
!! GAACCAAACAAAAAAATTAA+TGG + chr7_3:4289604-4289623 None:intergenic 20.0%
!! TTCAAATAAATGATAGACAA+AGG + chr7_3:4289690-4289709 None:intergenic 20.0%
!! CTATCATTTATTTGAATCAT+AGG - chr7_3:4289694-4289713 Msa1090330:intron 20.0%
!!! GTATTTTGGAGTTTTTATAT+GGG + chr7_3:4290861-4290880 None:intergenic 20.0%
!! CTTGAATGATAAAATAACAT+TGG + chr7_3:4290908-4290927 None:intergenic 20.0%
!!! TTACACATTTTATCAAGATT+GGG - chr7_3:4291160-4291179 Msa1090330:intron 20.0%
!!! AAAGTATATTAATTTTTGGG+AGG - chr7_3:4291591-4291610 Msa1090330:intron 20.0%
!! TGTACATTTAAATTAACTCT+TGG - chr7_3:4291642-4291661 Msa1090330:intron 20.0%
!! ACTATTCATTCATCTTAATA+CGG + chr7_3:4291707-4291726 None:intergenic 20.0%
!! AATAACGTTGTTATAAAACT+GGG - chr7_3:4292290-4292309 Msa1090330:intron 20.0%
!!! ATATCTTGAAGAATTTGTTT+TGG - chr7_3:4292791-4292810 Msa1090330:intron 20.0%
!! TGGTTTACTTAATTATGATT+TGG - chr7_3:4293257-4293276 Msa1090330:three_prime_UTR 20.0%
!! CTTTCTTAAGTTTATTCTAA+AGG + chr7_3:4293580-4293599 None:intergenic 20.0%
!!! TAGTAATTTTTTTACTCACA+TGG - chr7_3:4293661-4293680 Msa1090330:three_prime_UTR 20.0%
!! GCAAAATAGAGAATAAAATT+TGG - chr7_3:4293838-4293857 Msa1090330:three_prime_UTR 20.0%
!!! TTTTAATGAATAGCCAATAA+TGG + chr7_3:4294446-4294465 None:intergenic 20.0%
!! TCTTATGAATTGAAAAAGTT+AGG - chr7_3:4294973-4294992 Msa1090330:intron 20.0%
!! TTTATAACATCTTAATGAAG+AGG + chr7_3:4295013-4295032 None:intergenic 20.0%
!! ACACAAATCTAAATTGATAT+AGG - chr7_3:4295543-4295562 Msa1090330:intron 20.0%
!! GAACTTTGATATTAAATGAA+AGG + chr7_3:4295641-4295660 None:intergenic 20.0%
!! TGGATATTGAAATATAGATA+GGG + chr7_3:4296100-4296119 None:intergenic 20.0%
!! ATGGATATTGAAATATAGAT+AGG + chr7_3:4296101-4296120 None:intergenic 20.0%
!! TATCTATATTTCAATATCCA+TGG - chr7_3:4296100-4296119 Msa1090330:intron 20.0%
!!! TTGATTTTGTAAAATTGCTT+TGG - chr7_3:4296286-4296305 Msa1090330:intron 20.0%
!! TTTCTTATAAGTAATTCTCT+CGG - chr7_3:4296580-4296599 Msa1090330:intron 20.0%
!!! ACCTTTTTGAAATATTCATA+GGG - chr7_3:4297029-4297048 Msa1090330:intron 20.0%
!! TTTAACCTTTAATATCAATC+AGG + chr7_3:4297056-4297075 None:intergenic 20.0%
!!! CTAATTTTGTTGTTATTTTG+GGG - chr7_3:4297180-4297199 Msa1090330:intron 20.0%
!!! GATTTTCAAAACTATTATAG+AGG - chr7_3:4297569-4297588 Msa1090330:intron 20.0%
!!! TAGGTTCTAAATTTGAAATT+TGG - chr7_3:4297718-4297737 Msa1090330:three_prime_UTR 20.0%
!! TTAATTCAGTGATTCATAAA+AGG + chr7_3:4298585-4298604 None:intergenic 20.0%
!! TTTGTAGAACAAATTAAGAT+GGG + chr7_3:4298882-4298901 None:intergenic 20.0%
!! TATATATTAGTTAAGATGGA+TGG - chr7_3:4298917-4298936 Msa1090330:intron 20.0%
!!! AATTTAAAAGCATGTACATA+TGG + chr7_3:4299005-4299024 None:intergenic 20.0%
!!! ACATGCTTTTAAATTTCTAT+TGG - chr7_3:4299010-4299029 Msa1090330:intron 20.0%
!!! AACCTATTTGATTTTGTATT+CGG - chr7_3:4299250-4299269 Msa1090330:intron 20.0%
!!! AAATGAGATTTTAGTCTATA+TGG - chr7_3:4299455-4299474 Msa1090330:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG - chr7_3:4299537-4299556 Msa1090330:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG - chr7_3:4299537-4299556 Msa1090330:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG + chr7_3:4299895-4299914 None:intergenic 20.0%
!! AATATTATGTTACGCAATAA+AGG + chr7_3:4299948-4299967 None:intergenic 20.0%
!!! AACCAATTTCGTTTTAAATT+TGG - chr7_3:4299970-4299989 Msa1090330:intron 20.0%
!!! TACCAAATTTAAAACGAAAT+TGG + chr7_3:4299975-4299994 None:intergenic 20.0%
!!! AACCTATTTGGTTTTATATT+CGG - chr7_3:4299537-4299556 Msa1090330:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG - chr7_3:4299537-4299556 Msa1090330:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG + chr7_3:4299895-4299914 None:intergenic 20.0%
!! AATATTATGTTACGCAATAA+AGG + chr7_3:4299948-4299967 None:intergenic 20.0%
!!! AACCAATTTCGTTTTAAATT+TGG - chr7_3:4299970-4299989 Msa1090330:intron 20.0%
!!! TACCAAATTTAAAACGAAAT+TGG + chr7_3:4299975-4299994 None:intergenic 20.0%
!!! AACCTATTTGGTTTTATATT+CGG - chr7_3:4299537-4299556 Msa1090330:intron 20.0%
!!! TTTGATAAAGGTTTGAAATT+CGG - chr7_3:4301073-4301092 Msa1090330:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG - chr7_3:4299537-4299556 Msa1090330:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG + chr7_3:4299895-4299914 None:intergenic 20.0%
!!! GAACCAATTTCTTTTAAATT+TGG - chr7_3:4301515-4301534 Msa1090330:intron 20.0%
!!! TACATGTTTGTTAAATATGA+AGG - chr7_3:4300051-4300070 Msa1090330:intron 20.0%
!! TACAAAAATGATAAATGAGA+AGG - chr7_3:4301908-4301927 Msa1090330:intron 20.0%
!!! AGACGTTTTAAACTATTAAT+TGG - chr7_3:4302139-4302158 Msa1090330:intron 20.0%
!! AGCATAGTTAATTCTAAATT+CGG - chr7_3:4302296-4302315 Msa1090330:CDS 20.0%
!! TAATTCTAAATTCGGTAAAT+TGG - chr7_3:4302304-4302323 Msa1090330:CDS 20.0%
!!! TGGTTTTAAATTCAGTAAAT+TGG - chr7_3:4302422-4302441 Msa1090330:intron 20.0%
!! AAAAACAAAAATCTTGAGAT+CGG + chr7_3:4303055-4303074 None:intergenic 20.0%
!!! TCATGTTATTTATCTACTTT+GGG - chr7_3:4303159-4303178 Msa1090330:intron 20.0%
!!! TCAAAATTTTAAACGTATTC+AGG + chr7_3:4303236-4303255 None:intergenic 20.0%
!! TGATGTTCAAATTTCAAAAA+AGG + chr7_3:4303479-4303498 None:intergenic 20.0%
!! AATATTATGTTATGCATCAA+GGG + chr7_3:4303833-4303852 None:intergenic 20.0%
!! AAATATTATGTTATGCATCA+AGG + chr7_3:4303834-4303853 None:intergenic 20.0%
!! ACATAATATTTGAACCTATT+TGG - chr7_3:4303843-4303862 Msa1090330:CDS 20.0%
!!! AACCTATTTGGTTTTAAATT+CGG - chr7_3:4303855-4303874 Msa1090330:CDS 20.0%
!!! TTCGGTAATTATAAAGTATT+AGG - chr7_3:4303873-4303892 Msa1090330:CDS 20.0%
!!! ATGGTTACAAGTTTTATAAA+TGG - chr7_3:4303931-4303950 Msa1090330:CDS 20.0%
!!! TACAAGTTTTATAAATGGAA+AGG - chr7_3:4303936-4303955 Msa1090330:CDS 20.0%
!!! AACCTATTTAGTTTTGTATT+CGG - chr7_3:4303992-4304011 Msa1090330:CDS 20.0%
!!! AAGAGTTTTTAGATTGTAGA+AGG + chr7_3:4287709-4287728 None:intergenic 25.0%
! GAAAATTGAGAAATAAGAGA+AGG + chr7_3:4287754-4287773 None:intergenic 25.0%
!! GTTATTGATGATAGTTGTTA+AGG - chr7_3:4287896-4287915 Msa1090330:three_prime_UTR 25.0%
! ATAGTTGTTAAGGGTAAAAA+CGG - chr7_3:4287906-4287925 Msa1090330:three_prime_UTR 25.0%
! GAAGATTCAAAATCATAGAA+TGG + chr7_3:4288241-4288260 None:intergenic 25.0%
! ATCTGAATTTGAATCTCATA+TGG - chr7_3:4288285-4288304 Msa1090330:three_prime_UTR 25.0%
! AAGTGTTAAATTTAGATCAG+TGG - chr7_3:4288435-4288454 Msa1090330:intron 25.0%
! TATCATAATGTTTAAGCAAC+AGG + chr7_3:4288500-4288519 None:intergenic 25.0%
! ATGTCTTCTCATAATATCAA+TGG - chr7_3:4288572-4288591 Msa1090330:intron 25.0%
!! GTAATTTTCAACACACTATT+TGG - chr7_3:4288613-4288632 Msa1090330:intron 25.0%
!!! TTTGTTTTTGCAGGTTTAAA+TGG - chr7_3:4288665-4288684 Msa1090330:three_prime_UTR 25.0%
! AACACTCTATACTAAATGTT+TGG - chr7_3:4288718-4288737 Msa1090330:three_prime_UTR 25.0%
! TCATAACCTTCTTCATTAAT+AGG - chr7_3:4288785-4288804 Msa1090330:three_prime_UTR 25.0%
! AATAAGCCTATTAATGAAGA+AGG + chr7_3:4288794-4288813 None:intergenic 25.0%
! TTCAATTGAGTATCATTGAA+AGG - chr7_3:4288865-4288884 Msa1090330:intron 25.0%
! ATTACAACTTTCTAATCCAA+AGG + chr7_3:4289125-4289144 None:intergenic 25.0%
!!! TCTTTTGTAATTGGCTTTTT+AGG - chr7_3:4289272-4289291 Msa1090330:intron 25.0%
!! ACAAATTTTACCTGCTTTAA+AGG + chr7_3:4289534-4289553 None:intergenic 25.0%
! TAATGGCTCAAGTTAAAAAT+GGG + chr7_3:4289587-4289606 None:intergenic 25.0%
! TTAATGGCTCAAGTTAAAAA+TGG + chr7_3:4289588-4289607 None:intergenic 25.0%
!!! GAGCCATTAATTTTTTTGTT+TGG - chr7_3:4289598-4289617 Msa1090330:intron 25.0%
!!! AGTGAATTGATTTTGACTAA+TGG - chr7_3:4289645-4289664 Msa1090330:intron 25.0%
! TTTATTTGAATCATAGGACT+TGG - chr7_3:4289700-4289719 Msa1090330:intron 25.0%
! TTATTTGAATCATAGGACTT+GGG - chr7_3:4289701-4289720 Msa1090330:intron 25.0%
!!! TGATATTTTTTTCAGATGTG+AGG + chr7_3:4289742-4289761 None:intergenic 25.0%
!! GTAGTTTGCATAAACAATAA+AGG + chr7_3:4289941-4289960 None:intergenic 25.0%
! CAAACTACTTATAAAGACTA+AGG - chr7_3:4289953-4289972 Msa1090330:intron 25.0%
!! ATTGATAATTCCAAAAGACT+AGG - chr7_3:4290044-4290063 Msa1090330:intron 25.0%
! TGATAACTTCATTACTTCTA+AGG + chr7_3:4290789-4290808 None:intergenic 25.0%
!!! CGTATTTTGGAGTTTTTATA+TGG + chr7_3:4290862-4290881 None:intergenic 25.0%
! ATAAAAACTCCAAAATACGT+AGG - chr7_3:4290863-4290882 Msa1090330:intron 25.0%
! TGTGTAAGATATTATCTAGA+CGG + chr7_3:4291147-4291166 None:intergenic 25.0%
!! CTTACACATTTTATCAAGAT+TGG - chr7_3:4291159-4291178 Msa1090330:intron 25.0%
! ACCAAAAATACATGAATAGT+AGG + chr7_3:4291367-4291386 None:intergenic 25.0%
! TCACTTATTATACTCATTAC+CGG - chr7_3:4291542-4291561 Msa1090330:intron 25.0%
!! ATGATTCTAGTTATATAGAC+CGG + chr7_3:4291564-4291583 None:intergenic 25.0%
!!! TTGACAAGACCATTTTTTTA+AGG + chr7_3:4291795-4291814 None:intergenic 25.0%
! GAATAACGTTGTTATAAAAC+TGG - chr7_3:4292289-4292308 Msa1090330:intron 25.0%
! AAAACAATGGATCTAAAGAA+TGG + chr7_3:4292447-4292466 None:intergenic 25.0%
! AATAGGCTGTAAAAAAACAA+TGG + chr7_3:4292460-4292479 None:intergenic 25.0%
! GTCTATTATTGAATATGTTG+AGG - chr7_3:4293025-4293044 Msa1090330:three_prime_UTR 25.0%
! CATAATACATTATGTTAGTG+TGG + chr7_3:4293072-4293091 None:intergenic 25.0%
!!! ATTTATGGACTTCTAGAATA+TGG - chr7_3:4293237-4293256 Msa1090330:three_prime_UTR 25.0%
!! TTTGGTGATTTAGTGATTAT+TGG - chr7_3:4293275-4293294 Msa1090330:three_prime_UTR 25.0%
! TAACTCTTGGCATAAATATT+TGG + chr7_3:4293604-4293623 None:intergenic 25.0%
! AATCCAATATCAATAACTCT+TGG + chr7_3:4293617-4293636 None:intergenic 25.0%
!!! TCTTGTTTTCTCACTTTAAT+TGG - chr7_3:4293870-4293889 Msa1090330:three_prime_UTR 25.0%
!!! TTTAATTGGTTTTACTTTCC+AGG - chr7_3:4293884-4293903 Msa1090330:three_prime_UTR 25.0%
! TCTCCAAAATAAGTAAATTC+TGG + chr7_3:4293944-4293963 None:intergenic 25.0%
! TATCTTATGCATTGAAAACA+GGG + chr7_3:4294050-4294069 None:intergenic 25.0%
! TTATCTTATGCATTGAAAAC+AGG + chr7_3:4294051-4294070 None:intergenic 25.0%
! TTCAACAAAATTGATAGAGT+TGG + chr7_3:4294090-4294109 None:intergenic 25.0%
! GTATTCCATTAAGATGAAAA+CGG - chr7_3:4294175-4294194 Msa1090330:intron 25.0%
! TTCTAATCGAAATAATGGTA+AGG - chr7_3:4294280-4294299 Msa1090330:intron 25.0%
!!! TTTTTCCTCTCTAAAATAGT+TGG - chr7_3:4294410-4294429 Msa1090330:intron 25.0%
!! TGGAAAGATTTTTCCATTAT+TGG - chr7_3:4294430-4294449 Msa1090330:intron 25.0%
! TACCTTCAATAAGTATTCAA+TGG - chr7_3:4294476-4294495 Msa1090330:intron 25.0%
! TACCATTGAATACTTATTGA+AGG + chr7_3:4294481-4294500 None:intergenic 25.0%
!!! AATTCACTGTTTTAAAACTC+TGG + chr7_3:4294587-4294606 None:intergenic 25.0%
!! TTCACCAACAATAATGTTTT+TGG - chr7_3:4294660-4294679 Msa1090330:intron 25.0%
! AGAACCAAAAACATTATTGT+TGG + chr7_3:4294667-4294686 None:intergenic 25.0%
!!! ACAATAATGTTTTTGGTTCT+TGG - chr7_3:4294667-4294686 Msa1090330:intron 25.0%
!! ATTAGTCTATGAGTATGATT+GGG + chr7_3:4294856-4294875 None:intergenic 25.0%
!! AATTAGTCTATGAGTATGAT+TGG + chr7_3:4294857-4294876 None:intergenic 25.0%
! ATCATACTCATAGACTAATT+TGG - chr7_3:4294857-4294876 Msa1090330:intron 25.0%
! TATCATTTGCTTTCTTAATG+AGG - chr7_3:4295059-4295078 Msa1090330:intron 25.0%
! ATCATTTGCTTTCTTAATGA+GGG - chr7_3:4295060-4295079 Msa1090330:intron 25.0%
! AGAAATTATCATGCAAAACT+GGG + chr7_3:4295206-4295225 None:intergenic 25.0%
! AAGAAATTATCATGCAAAAC+TGG + chr7_3:4295207-4295226 None:intergenic 25.0%
!!! TCTTATTCACTTTTTTTTCC+TGG - chr7_3:4295349-4295368 Msa1090330:intron 25.0%
!! TACATTATCAGAAAAAGTGT+TGG - chr7_3:4295466-4295485 Msa1090330:intron 25.0%
! TCGTTACATAGTATTTGTTT+AGG - chr7_3:4295793-4295812 Msa1090330:intron 25.0%
! CGTTACATAGTATTTGTTTA+GGG - chr7_3:4295794-4295813 Msa1090330:intron 25.0%
! GTTACATAGTATTTGTTTAG+GGG - chr7_3:4295795-4295814 Msa1090330:intron 25.0%
!!! TGTTCTTTGGTTTATTGTTT+TGG - chr7_3:4295873-4295892 Msa1090330:intron 25.0%
! TTGGCATTATAAGGATATTT+AGG + chr7_3:4296031-4296050 None:intergenic 25.0%
! TAAATATCCTTATAATGCCA+AGG - chr7_3:4296030-4296049 Msa1090330:intron 25.0%
! GAAAATAGAGATTAATGAGT+TGG - chr7_3:4296210-4296229 Msa1090330:intron 25.0%
! ATAAGCTATTTATGGAAACA+AGG + chr7_3:4296617-4296636 None:intergenic 25.0%
! AAGTGATTGAATATATCTGT+TGG - chr7_3:4296759-4296778 Msa1090330:intron 25.0%
!!! CTAATCATTTTGACAAAATG+TGG - chr7_3:4296947-4296966 Msa1090330:intron 25.0%
!!! GACCTTTTTGAAATATTCAT+AGG - chr7_3:4297028-4297047 Msa1090330:intron 25.0%
! TCCCTATGAATATTTCAAAA+AGG + chr7_3:4297033-4297052 None:intergenic 25.0%
! CATAATTTCAACGACTAATT+TGG - chr7_3:4297126-4297145 Msa1090330:intron 25.0%
! ACAAAATTAGTAACTTTCAC+CGG + chr7_3:4297170-4297189 None:intergenic 25.0%
!!! TGTTTTTTGAGTGATATAGT+CGG - chr7_3:4297331-4297350 Msa1090330:intron 25.0%
! TTAATTTATGACATAGTGCA+TGG + chr7_3:4297456-4297475 None:intergenic 25.0%
! TTTCAAAACTATTATAGAGG+TGG - chr7_3:4297572-4297591 Msa1090330:intron 25.0%
!! TCATGTTTTCATGATTTCAA+GGG + chr7_3:4297968-4297987 None:intergenic 25.0%
! CGACAAGTTTAAAAATATTG+TGG - chr7_3:4298116-4298135 Msa1090330:intron 25.0%
! GATGAATGCAAAATATTAGA+TGG + chr7_3:4298730-4298749 None:intergenic 25.0%
! TTGTAGAACAAATTAAGATG+GGG + chr7_3:4298881-4298900 None:intergenic 25.0%
! CTTTGTAGAACAAATTAAGA+TGG + chr7_3:4298883-4298902 None:intergenic 25.0%
!! TAGAATTCTGAAGACATATA+AGG - chr7_3:4299041-4299060 Msa1090330:intron 25.0%
!! AGAATTCTGAAGACATATAA+GGG - chr7_3:4299042-4299061 Msa1090330:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG + chr7_3:4299184-4299203 None:intergenic 25.0%
! TACCGAATACAAAATCAAAT+AGG + chr7_3:4299255-4299274 None:intergenic 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG - chr7_3:4299267-4299286 Msa1090330:intron 25.0%
! TACCGAATATAAAACCAAAT+AGG + chr7_3:4299542-4299561 None:intergenic 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG - chr7_3:4299267-4299286 Msa1090330:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG + chr7_3:4299610-4299629 None:intergenic 25.0%
! TTCCGAATATAAAACCAAAT+AGG + chr7_3:4299684-4299703 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG - chr7_3:4299696-4299715 Msa1090330:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG + chr7_3:4299610-4299629 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG - chr7_3:4299611-4299630 Msa1090330:intron 25.0%
!!! AACCTATTTGGTTTTGTATT+CGG - chr7_3:4299821-4299840 Msa1090330:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG + chr7_3:4299876-4299895 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG + chr7_3:4299592-4299611 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! AAATGATATGTGAACCTATT+TGG - chr7_3:4300107-4300126 Msa1090330:intron 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG - chr7_3:4300119-4300138 Msa1090330:intron 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG - chr7_3:4300176-4300195 Msa1090330:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG + chr7_3:4299684-4299703 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG - chr7_3:4299696-4299715 Msa1090330:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG + chr7_3:4299610-4299629 None:intergenic 25.0%
! TTCCGAATATAAAACCAAAT+AGG + chr7_3:4299684-4299703 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG - chr7_3:4299696-4299715 Msa1090330:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG + chr7_3:4299610-4299629 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG - chr7_3:4299611-4299630 Msa1090330:intron 25.0%
!!! AACCTATTTGGTTTTGTATT+CGG - chr7_3:4299821-4299840 Msa1090330:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG + chr7_3:4299876-4299895 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG + chr7_3:4299592-4299611 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! AAATGATATGTGAACCTATT+TGG - chr7_3:4300107-4300126 Msa1090330:intron 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG - chr7_3:4300119-4300138 Msa1090330:intron 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG - chr7_3:4300176-4300195 Msa1090330:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG + chr7_3:4299684-4299703 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG - chr7_3:4299696-4299715 Msa1090330:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG + chr7_3:4299610-4299629 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG - chr7_3:4299611-4299630 Msa1090330:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG + chr7_3:4299684-4299703 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG - chr7_3:4299696-4299715 Msa1090330:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG + chr7_3:4299610-4299629 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG - chr7_3:4299611-4299630 Msa1090330:intron 25.0%
!!! AACCTATTTGGTTTGTTATT+CGG - chr7_3:4301358-4301377 Msa1090330:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG + chr7_3:4299876-4299895 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG + chr7_3:4299592-4299611 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG - chr7_3:4299593-4299612 Msa1090330:intron 25.0%
! AACATTATGTTACGCAATAA+AGG + chr7_3:4301494-4301513 None:intergenic 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG - chr7_3:4300119-4300138 Msa1090330:intron 25.0%
!!! AAATTTCATTTTTCCGACAA+GGG + chr7_3:4301712-4301731 None:intergenic 25.0%
!!! AAAATTTCATTTTTCCGACA+AGG + chr7_3:4301713-4301732 None:intergenic 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG - chr7_3:4300176-4300195 Msa1090330:intron 25.0%
!!! ATTTTTAAGCCAAGTTTGTT+TGG - chr7_3:4301969-4301988 Msa1090330:intron 25.0%
!!! ACTAGGTTCAAATCATTTTT+GGG + chr7_3:4302041-4302060 None:intergenic 25.0%
!! AACTAGGTTCAAATCATTTT+TGG + chr7_3:4302042-4302061 None:intergenic 25.0%
! TAGAAATTTGATAAATGGGA+AGG - chr7_3:4302238-4302257 Msa1090330:CDS 25.0%
!! ACTTGATATTTAAGACTAGT+TGG - chr7_3:4302402-4302421 Msa1090330:intron 25.0%
! AAAAGAGTAAAGATGCAAAT+GGG + chr7_3:4302612-4302631 None:intergenic 25.0%
! AAAAAGAGTAAAGATGCAAA+TGG + chr7_3:4302613-4302632 None:intergenic 25.0%
!! GCAGATAAAGTTTTCTTAAT+CGG + chr7_3:4302702-4302721 None:intergenic 25.0%
! CCAATTTATTGATCTCTTTA+CGG - chr7_3:4302812-4302831 Msa1090330:intron 25.0%
! ATCATACAAAAGCAAATTCA+AGG - chr7_3:4302973-4302992 Msa1090330:intron 25.0%
!! TAATTTTCTGCCATTGAATA+AGG - chr7_3:4303004-4303023 Msa1090330:intron 25.0%
!! GTCATGTTATTTATCTACTT+TGG - chr7_3:4303158-4303177 Msa1090330:intron 25.0%
! TATGAAATTGCTCAAAGTTA+GGG + chr7_3:4303210-4303229 None:intergenic 25.0%
! ATATGAAATTGCTCAAAGTT+AGG + chr7_3:4303211-4303230 None:intergenic 25.0%
! TCTAACATACTTATATTAGC+AGG + chr7_3:4303278-4303297 None:intergenic 25.0%
! TAGTAAGGTTGTGTAAAAAA+TGG - chr7_3:4303522-4303541 Msa1090330:CDS 25.0%
! AGTAAGGTTGTGTAAAAAAT+GGG - chr7_3:4303523-4303542 Msa1090330:CDS 25.0%
! ATACAAAGCTTCTTTATTGA+CGG - chr7_3:4303638-4303657 Msa1090330:CDS 25.0%
!! AAGCTAAAATCTCATTTTCT+CGG + chr7_3:4303758-4303777 None:intergenic 25.0%
!!! AATGAGATTTTAGCTTATCT+CGG - chr7_3:4303762-4303781 Msa1090330:intron 25.0%
!! TACCGAATTTAAAACCAAAT+AGG + chr7_3:4303860-4303879 None:intergenic 25.0%
!!! AAATGCGATTTTAGCTTATA+TGG - chr7_3:4303912-4303931 Msa1090330:CDS 25.0%
!!! CACATCATGTTTTAAATCAA+GGG + chr7_3:4303972-4303991 None:intergenic 25.0%
!!! TCACATCATGTTTTAAATCA+AGG + chr7_3:4303973-4303992 None:intergenic 25.0%
! AACCGAATACAAAACTAAAT+AGG + chr7_3:4303997-4304016 None:intergenic 25.0%
GTAAAACCAATTGAATGTTC+TGG + chr7_3:4287679-4287698 None:intergenic 30.0%
AATTGAGAAATAAGAGAAGG+AGG + chr7_3:4287751-4287770 None:intergenic 30.0%
!! TCGATTCTCAATTTGTTGTT+GGG + chr7_3:4287957-4287976 None:intergenic 30.0%
!! ATCGATTCTCAATTTGTTGT+TGG + chr7_3:4287958-4287977 None:intergenic 30.0%
! CTTTTGGTAGAATTGAGTTT+GGG - chr7_3:4288000-4288019 Msa1090330:three_prime_UTR 30.0%
TTGACCTTGAATTGTTTGTA+CGG + chr7_3:4288077-4288096 None:intergenic 30.0%
! TTGTTGGGTATGTTTTTCTT+AGG - chr7_3:4288358-4288377 Msa1090330:intron 30.0%
!!! TAATTGTGTTTTTGGACTGT+TGG - chr7_3:4288388-4288407 Msa1090330:intron 30.0%
AAACAACGAGCAAAAGTTTA+AGG + chr7_3:4288939-4288958 None:intergenic 30.0%
TTACTAGAAACCAAAACACA+AGG + chr7_3:4289027-4289046 None:intergenic 30.0%
TGAAATATGATCATTGCCTT+TGG - chr7_3:4289106-4289125 Msa1090330:three_prime_UTR 30.0%
TTTCTCGTCTGAAGAATTTA+TGG + chr7_3:4289460-4289479 None:intergenic 30.0%
AAATATCACCTGCATATTAG+AGG - chr7_3:4289754-4289773 Msa1090330:intron 30.0%
CACTCAACATGAATCATTAT+AGG - chr7_3:4289845-4289864 Msa1090330:intron 30.0%
! TCAAACTTCTCATTGGTTAT+TGG + chr7_3:4289872-4289891 None:intergenic 30.0%
TTATACACAATTTACCAGAC+AGG - chr7_3:4289985-4290004 Msa1090330:intron 30.0%
TATACACAATTTACCAGACA+GGG - chr7_3:4289986-4290005 Msa1090330:intron 30.0%
!! TATCTTATCACCTAGTCTTT+TGG + chr7_3:4290057-4290076 None:intergenic 30.0%
TTGCTCCTTCAATACAAAAT+AGG - chr7_3:4290249-4290268 Msa1090330:intron 30.0%
! TCTGATATTGAGTTCTGATT+GGG + chr7_3:4290470-4290489 None:intergenic 30.0%
! TTCTGATATTGAGTTCTGAT+TGG + chr7_3:4290471-4290490 None:intergenic 30.0%
AGAACTCAATATCAGAATCT+CGG - chr7_3:4290474-4290493 Msa1090330:intron 30.0%
AAAGTTATCCAGAACAGATT+GGG + chr7_3:4290541-4290560 None:intergenic 30.0%
AAAAGTTATCCAGAACAGAT+TGG + chr7_3:4290542-4290561 None:intergenic 30.0%
! TAACTTCATTACTTCTAAGG+TGG + chr7_3:4290786-4290805 None:intergenic 30.0%
!! TAATCTAGTCTTACCAAAAG+AGG + chr7_3:4290819-4290838 None:intergenic 30.0%
!! ACTTATTAGCCTACGTATTT+TGG + chr7_3:4290875-4290894 None:intergenic 30.0%
!!! ATCAAGATTGGGTGTTTTTT+TGG - chr7_3:4291171-4291190 Msa1090330:intron 30.0%
! GCCTACTATTCATGTATTTT+TGG - chr7_3:4291363-4291382 Msa1090330:intron 30.0%
! TTTTATGTTGACATACTGCT+AGG + chr7_3:4291481-4291500 None:intergenic 30.0%
TGATATAAAAGCAGATGGAA+AGG + chr7_3:4292038-4292057 None:intergenic 30.0%
CAACTTGATATAAAAGCAGA+TGG + chr7_3:4292043-4292062 None:intergenic 30.0%
!!! ATCACAATCGGAATTTTTTC+TGG - chr7_3:4292208-4292227 Msa1090330:intron 30.0%
ATAACAACGTTATTCTGTCA+CGG + chr7_3:4292284-4292303 None:intergenic 30.0%
! GAACGATGTAGACTAATTTT+TGG - chr7_3:4292317-4292336 Msa1090330:intron 30.0%
AAAATAGAGGAAGAGAGAAT+AGG + chr7_3:4292477-4292496 None:intergenic 30.0%
!!! TCTTTCTGTATCTTTTTTCG+CGG - chr7_3:4292863-4292882 Msa1090330:intron 30.0%
!! CTATGAAACTTGTTGTTGAA+TGG - chr7_3:4293169-4293188 Msa1090330:intron 30.0%
!! CTATTTCTAACTGATTCGAA+TGG - chr7_3:4293212-4293231 Msa1090330:three_prime_UTR 30.0%
! CTGATTCGAATGGTAATTTA+TGG - chr7_3:4293222-4293241 Msa1090330:three_prime_UTR 30.0%
AAGATATTAGCATGCAAAGT+TGG + chr7_3:4293318-4293337 None:intergenic 30.0%
AACTTTGCATGCTAATATCT+TGG - chr7_3:4293317-4293336 Msa1090330:three_prime_UTR 30.0%
ACTTTGCATGCTAATATCTT+GGG - chr7_3:4293318-4293337 Msa1090330:three_prime_UTR 30.0%
GATGAAGAAATGAAGTAAGA+AGG + chr7_3:4293502-4293521 None:intergenic 30.0%
! TTCTAAAGGTTAGTGAAGAA+TGG + chr7_3:4293566-4293585 None:intergenic 30.0%
ATGCCAAGAGTTATTGATAT+TGG - chr7_3:4293611-4293630 Msa1090330:three_prime_UTR 30.0%
TAAACTGAATTATTGTGTGC+AGG - chr7_3:4293719-4293738 Msa1090330:three_prime_UTR 30.0%
AAGATGCTAATTAGCTACTA+AGG + chr7_3:4293772-4293791 None:intergenic 30.0%
TTGAATCAGATAACAAACCT+TGG - chr7_3:4293804-4293823 Msa1090330:three_prime_UTR 30.0%
! TTTTGCAATATTCCTTACCA+AGG + chr7_3:4293824-4293843 None:intergenic 30.0%
CCAAAATAAGTAAATTCTGG+AGG + chr7_3:4293941-4293960 None:intergenic 30.0%
! CCTCCAGAATTTACTTATTT+TGG - chr7_3:4293938-4293957 Msa1090330:three_prime_UTR 30.0%
GATTACCACTTACAAAATCA+AGG - chr7_3:4293962-4293981 Msa1090330:three_prime_UTR 30.0%
TGTTGAACTATATAACACGT+TGG - chr7_3:4294103-4294122 Msa1090330:intron 30.0%
! GTAAGGTGATACTCTAATTT+TGG - chr7_3:4294297-4294316 Msa1090330:intron 30.0%
!! TCTAATTTTGGTCTGAATGA+AGG - chr7_3:4294309-4294328 Msa1090330:intron 30.0%
!! TCTTTCCAACTATTTTAGAG+AGG + chr7_3:4294418-4294437 None:intergenic 30.0%
! TTGTGCATTTTCAGAAACAA+TGG - chr7_3:4294605-4294624 Msa1090330:intron 30.0%
!! TTCTTGGTTCTAAACTACTT+GGG - chr7_3:4294683-4294702 Msa1090330:intron 30.0%
AATTTGCCTCTAATTTCTGT+TGG - chr7_3:4294717-4294736 Msa1090330:intron 30.0%
ATTTGCCTCTAATTTCTGTT+GGG - chr7_3:4294718-4294737 Msa1090330:intron 30.0%
AAATTCCCAACAGAAATTAG+AGG + chr7_3:4294726-4294745 None:intergenic 30.0%
GAAATTATCATGCAAAACTG+GGG + chr7_3:4295205-4295224 None:intergenic 30.0%
TCTATTATCAATAGGGTCAA+TGG + chr7_3:4295417-4295436 None:intergenic 30.0%
! ATTTAAACGCAGCTTTGTAA+TGG - chr7_3:4295437-4295456 Msa1090330:intron 30.0%
! TTTAAACGCAGCTTTGTAAT+GGG - chr7_3:4295438-4295457 Msa1090330:intron 30.0%
CCATGGATATTAAGAGTTTA+AGG + chr7_3:4295508-4295527 None:intergenic 30.0%
CCTTAAACTCTTAATATCCA+TGG - chr7_3:4295505-4295524 Msa1090330:intron 30.0%
! AGAGGCAATTGATTTATTTC+AGG + chr7_3:4295606-4295625 None:intergenic 30.0%
GAAATAAATCAATTGCCTCT+TGG - chr7_3:4295606-4295625 Msa1090330:intron 30.0%
! ACGCTTTTCATTTACTTAGA+CGG - chr7_3:4295678-4295697 Msa1090330:intron 30.0%
GGGCTGATTAAAGAATAATT+TGG - chr7_3:4295719-4295738 Msa1090330:intron 30.0%
AATGAGTTATGTAAAATGCG+AGG - chr7_3:4295743-4295762 Msa1090330:intron 30.0%
TATTTGTTTAGGGGATATGT+GGG - chr7_3:4295804-4295823 Msa1090330:intron 30.0%
!!! CTTTGGTTTATTGTTTTGGA+AGG - chr7_3:4295877-4295896 Msa1090330:intron 30.0%
!!! GTTTATTGTTTTGGAAGGAT+AGG - chr7_3:4295882-4295901 Msa1090330:intron 30.0%
CAATATTGGGAAGATTTGTA+GGG - chr7_3:4295962-4295981 Msa1090330:intron 30.0%
! CAAAAGCTTTTAATCACTTC+TGG - chr7_3:4296370-4296389 Msa1090330:intron 30.0%
! AAAGTGTGTATTTTCTGTCA+CGG + chr7_3:4296494-4296513 None:intergenic 30.0%
ACAGAAAATACACACTTTGT+TGG - chr7_3:4296496-4296515 Msa1090330:intron 30.0%
AGCAGCAAATAAGCTATTTA+TGG + chr7_3:4296625-4296644 None:intergenic 30.0%
CATCTCTATGTCGATATTAA+AGG + chr7_3:4296831-4296850 None:intergenic 30.0%
GATTATGAATAAACGAACGA+AGG + chr7_3:4296875-4296894 None:intergenic 30.0%
TGACAACACCCAAATTTATA+GGG + chr7_3:4296919-4296938 None:intergenic 30.0%
ATGACAACACCCAAATTTAT+AGG + chr7_3:4296920-4296939 None:intergenic 30.0%
!! TACCTCTAAAACAATGAAGT+TGG + chr7_3:4297087-4297106 None:intergenic 30.0%
!!! AACTTCATTGTTTTAGAGGT+AGG - chr7_3:4297086-4297105 Msa1090330:intron 30.0%
!!! ACTTCATTGTTTTAGAGGTA+GGG - chr7_3:4297087-4297106 Msa1090330:intron 30.0%
AATTTCAACGACTAATTTGG+TGG - chr7_3:4297129-4297148 Msa1090330:intron 30.0%
TCATATGAGAAAAATTCCTC+AGG + chr7_3:4297211-4297230 None:intergenic 30.0%
! TGAGGAATTTTTCTCATATG+AGG - chr7_3:4297210-4297229 Msa1090330:intron 30.0%
TGTTAAGTGAAAGACATGAT+TGG - chr7_3:4297495-4297514 Msa1090330:intron 30.0%
TTGAATGCTTAATTGCAGAA+AGG - chr7_3:4297545-4297564 Msa1090330:intron 30.0%
AAAACTATTATAGAGGTGGT+TGG - chr7_3:4297576-4297595 Msa1090330:intron 30.0%
AATTGCCTATCATCATTCAA+CGG + chr7_3:4297612-4297631 None:intergenic 30.0%
! ACATTTTCCTTGTAGTTCAA+TGG + chr7_3:4297654-4297673 None:intergenic 30.0%
TTGAAATTTGGAGATTATGC+TGG - chr7_3:4297730-4297749 Msa1090330:three_prime_UTR 30.0%
ATGAGATAAATACATGACGA+TGG - chr7_3:4297925-4297944 Msa1090330:intron 30.0%
AAATACATGACGATGGATAA+TGG - chr7_3:4297932-4297951 Msa1090330:intron 30.0%
AATACATGACGATGGATAAT+GGG - chr7_3:4297933-4297952 Msa1090330:intron 30.0%
! CTCATGTTTTCATGATTTCA+AGG + chr7_3:4297969-4297988 None:intergenic 30.0%
CTTGAAATCATGAAAACATG+AGG - chr7_3:4297967-4297986 Msa1090330:intron 30.0%
AAAGAATAATCAGCCACAAT+TGG - chr7_3:4298140-4298159 Msa1090330:intron 30.0%
! CAGAATTCACAACTTTTGTT+TGG + chr7_3:4298224-4298243 None:intergenic 30.0%
TATGTAGATCATGTTCAGTT+AGG + chr7_3:4298323-4298342 None:intergenic 30.0%
! GTATTATTTGAAACTTCCCA+GGG + chr7_3:4298519-4298538 None:intergenic 30.0%
! AGTATTATTTGAAACTTCCC+AGG + chr7_3:4298520-4298539 None:intergenic 30.0%
TTAAGATGGATGGTAAGTTA+TGG - chr7_3:4298927-4298946 Msa1090330:intron 30.0%
GAAGACATATAAGGGTAATA+TGG - chr7_3:4299050-4299069 Msa1090330:intron 30.0%
!! AAATCTCATTTTCGAGACAA+GGG + chr7_3:4299298-4299317 None:intergenic 30.0%
!! AAAATCTCATTTTCGAGACA+AGG + chr7_3:4299299-4299318 None:intergenic 30.0%
! TTGTCTCGAAAATGAGATTT+TGG - chr7_3:4299298-4299317 Msa1090330:intron 30.0%
!! AAATGAGATTTTGGCCTATA+AGG - chr7_3:4299307-4299326 Msa1090330:intron 30.0%
!! TATCAAACTTGTAGCCTTAT+AGG + chr7_3:4299324-4299343 None:intergenic 30.0%
! AGGCTACAAGTTTGATAATT+AGG - chr7_3:4299327-4299346 Msa1090330:intron 30.0%
CATATCATGTTTCGCATTAA+GGG + chr7_3:4299377-4299396 None:intergenic 30.0%
ACATATCATGTTTCGCATTA+AGG + chr7_3:4299378-4299397 None:intergenic 30.0%
!!! ACCCTATTTGGTTTTGTTTT+CGG - chr7_3:4299399-4299418 Msa1090330:intron 30.0%
ACCGAAAACAAAACCAAATA+GGG + chr7_3:4299403-4299422 None:intergenic 30.0%
TACCGAAAACAAAACCAAAT+AGG + chr7_3:4299404-4299423 None:intergenic 30.0%
ATGGCTATAAGTTTGATGAA+TGG - chr7_3:4299474-4299493 Msa1090330:intron 30.0%
TGGCTATAAGTTTGATGAAT+GGG - chr7_3:4299475-4299494 Msa1090330:intron 30.0%
CATATCATGTTTCTCATCAA+GGG + chr7_3:4299515-4299534 None:intergenic 30.0%
ACATATCATGTTTCTCATCA+AGG + chr7_3:4299516-4299535 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG - chr7_3:4299238-4299257 Msa1090330:intron 30.0%
! ACATGATTTGTGAACCTATT+TGG - chr7_3:4299667-4299686 Msa1090330:intron 30.0%
CATATCATGTTTCGTATCAA+GGG + chr7_3:4299799-4299818 None:intergenic 30.0%
ACATATCATGTTTCGTATCA+AGG + chr7_3:4299800-4299819 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG - chr7_3:4299238-4299257 Msa1090330:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+TGG + chr7_3:4299869-4299888 None:intergenic 30.0%
!! CATATCATTTTTCGCATCAA+GGG + chr7_3:4300097-4300116 None:intergenic 30.0%
!! ACATATCATTTTTCGCATCA+AGG + chr7_3:4300098-4300117 None:intergenic 30.0%
TACCGAATTTCAAACCAAAT+AGG + chr7_3:4300124-4300143 None:intergenic 30.0%
! AAATTTCATTTTCGCGACAA+GGG + chr7_3:4300167-4300186 None:intergenic 30.0%
! AAAATTTCATTTTCGCGACA+AGG + chr7_3:4300168-4300187 None:intergenic 30.0%
TATCAAACTTCTAACCACAT+AGG + chr7_3:4300193-4300212 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG - chr7_3:4299238-4299257 Msa1090330:intron 30.0%
! ACATGATTTGTGAACCTATT+TGG - chr7_3:4299667-4299686 Msa1090330:intron 30.0%
CATATCATGTTTCGTATCAA+GGG + chr7_3:4299799-4299818 None:intergenic 30.0%
ACATATCATGTTTCGTATCA+AGG + chr7_3:4299800-4299819 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG - chr7_3:4299238-4299257 Msa1090330:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+TGG + chr7_3:4299869-4299888 None:intergenic 30.0%
!! CATATCATTTTTCGCATCAA+GGG + chr7_3:4300097-4300116 None:intergenic 30.0%
!! ACATATCATTTTTCGCATCA+AGG + chr7_3:4300098-4300117 None:intergenic 30.0%
TACCGAATTTCAAACCAAAT+AGG + chr7_3:4300124-4300143 None:intergenic 30.0%
! AAATTTCATTTTCGCGACAA+GGG + chr7_3:4300167-4300186 None:intergenic 30.0%
! AAAATTTCATTTTCGCGACA+AGG + chr7_3:4300168-4300187 None:intergenic 30.0%
TATCAAACTTCTAACCACAT+AGG + chr7_3:4300193-4300212 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG - chr7_3:4299238-4299257 Msa1090330:intron 30.0%
! ACATTTCATTTTCGCAACAA+GGG + chr7_3:4301121-4301140 None:intergenic 30.0%
! AACATTTCATTTTCGCAACA+AGG + chr7_3:4301122-4301141 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG - chr7_3:4299238-4299257 Msa1090330:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+CGG + chr7_3:4299869-4299888 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG - chr7_3:4299238-4299257 Msa1090330:intron 30.0%
TACCGAATTTCAAACCAAAT+AGG + chr7_3:4300124-4300143 None:intergenic 30.0%
TGGTTGCAAGTTTGATAAAT+GGG - chr7_3:4301741-4301760 Msa1090330:intron 30.0%
AAAATCATGTTTCGCATCTA+GGG + chr7_3:4301954-4301973 None:intergenic 30.0%
AAAAATCATGTTTCGCATCT+AGG + chr7_3:4301955-4301974 None:intergenic 30.0%
!!! TTCAAATCATTTTTGGGTTG+AGG + chr7_3:4302035-4302054 None:intergenic 30.0%
! CAATGATTGCTGAAGTTTTT+AGG - chr7_3:4302570-4302589 Msa1090330:intron 30.0%
CCGTAAAGAGATCAATAAAT+TGG + chr7_3:4302815-4302834 None:intergenic 30.0%
TTCCTATTTAGTTACACTCA+CGG - chr7_3:4302898-4302917 Msa1090330:intron 30.0%
! TTTTGTATGATGATTGCACT+CGG + chr7_3:4302964-4302983 None:intergenic 30.0%
TAGCATCAAACCTTATTCAA+TGG + chr7_3:4303017-4303036 None:intergenic 30.0%
ATACTTATATTAGCAGGACA+TGG + chr7_3:4303272-4303291 None:intergenic 30.0%
TGTTGAATAATCATCTTTCC+AGG - chr7_3:4303322-4303341 Msa1090330:intron 30.0%
! ATGTGCTTTTCTTTCAACTA+AGG - chr7_3:4303376-4303395 Msa1090330:intron 30.0%
AAGAGAGTCACTAAAATTCA+AGG + chr7_3:4303427-4303446 None:intergenic 30.0%
GTTGGATTCAGATGATAAAT+AGG + chr7_3:4303585-4303604 None:intergenic 30.0%
! TTCAATATGCAGTCTTATCA+AGG - chr7_3:4303669-4303688 Msa1090330:intron 30.0%
!!! ATGAGATTTTAGCTTATCTC+GGG - chr7_3:4303763-4303782 Msa1090330:intron 30.0%
GGGTTACATGTTTGATAAAT+TGG - chr7_3:4303783-4303802 Msa1090330:intron 30.0%
GATAAATTGGAAGTTTGAAC+TGG - chr7_3:4303796-4303815 Msa1090330:intron 30.0%
GATTCTCCAGAACATTCAAT+TGG - chr7_3:4287670-4287689 Msa1090330:three_prime_UTR 35.0%
ATAAGAGAAGGAGGAATGAA+GGG + chr7_3:4287742-4287761 None:intergenic 35.0%
AATAAGAGAAGGAGGAATGA+AGG + chr7_3:4287743-4287762 None:intergenic 35.0%
! AACAATTGAAGCGCTAAATC+TGG - chr7_3:4287839-4287858 Msa1090330:three_prime_UTR 35.0%
! ACAATTGAAGCGCTAAATCT+GGG - chr7_3:4287840-4287859 Msa1090330:three_prime_UTR 35.0%
! GCTTTTGGTAGAATTGAGTT+TGG - chr7_3:4287999-4288018 Msa1090330:three_prime_UTR 35.0%
TTCACCGTACAAACAATTCA+AGG - chr7_3:4288070-4288089 Msa1090330:three_prime_UTR 35.0%
AAGGCTAATTTGACAGCAAA+AGG + chr7_3:4288473-4288492 None:intergenic 35.0%
TGTTTAAGCAACAGGATCAA+AGG + chr7_3:4288492-4288511 None:intergenic 35.0%
GAAGTGAAATTGAACTCTGA+TGG - chr7_3:4289318-4289337 Msa1090330:intron 35.0%
TCAATTTCTTAATGGCAGCA+AGG + chr7_3:4289344-4289363 None:intergenic 35.0%
ATTATCAAGCATGTCAACAG+TGG + chr7_3:4289427-4289446 None:intergenic 35.0%
GTTAAAAATGGGCATTTCAG+CGG + chr7_3:4289576-4289595 None:intergenic 35.0%
AAGCATGTCAAACTTCTCAT+TGG + chr7_3:4289879-4289898 None:intergenic 35.0%
AGACTTGAAGGGATCAAATT+GGG - chr7_3:4289913-4289932 Msa1090330:intron 35.0%
CATGCTTGGTTAAGATTTCA+GGG - chr7_3:4290171-4290190 Msa1090330:intron 35.0%
TCCTATGCACTTTCAATGAA+AGG - chr7_3:4290219-4290238 Msa1090330:intron 35.0%
! TCCTTTCATTGAAAGTGCAT+AGG + chr7_3:4290223-4290242 None:intergenic 35.0%
! GCATGCCTATTTTGTATTGA+AGG + chr7_3:4290257-4290276 None:intergenic 35.0%
! TCAAAGCTAGGTTAGGTTTT+GGG + chr7_3:4290380-4290399 None:intergenic 35.0%
! TTCAAAGCTAGGTTAGGTTT+TGG + chr7_3:4290381-4290400 None:intergenic 35.0%
TCAATATCAGAATCTCGGAA+TGG - chr7_3:4290479-4290498 Msa1090330:intron 35.0%
TGACTCAATCTGAACTCAAA+CGG - chr7_3:4290509-4290528 Msa1090330:intron 35.0%
! TTATCAAACTCAGCCTCTTT+TGG - chr7_3:4290803-4290822 Msa1090330:intron 35.0%
TTAACCTCATCTTACATGCT+TGG + chr7_3:4290931-4290950 None:intergenic 35.0%
!!! GGTGTTTTTTTGGCGTTTTA+TGG - chr7_3:4291181-4291200 Msa1090330:intron 35.0%
! TTGGCGTTTTATGGTGTTTT+TGG - chr7_3:4291190-4291209 Msa1090330:intron 35.0%
! TGGCGTTTTATGGTGTTTTT+GGG - chr7_3:4291191-4291210 Msa1090330:intron 35.0%
TGCCTAAAAACACCAAAACT+GGG + chr7_3:4291265-4291284 None:intergenic 35.0%
! GTTTTATAGAGGAGATGAAG+GGG + chr7_3:4292176-4292195 None:intergenic 35.0%
!! GGTTTTATAGAGGAGATGAA+GGG + chr7_3:4292177-4292196 None:intergenic 35.0%
!! TTTCTCTGAGGGTTTTATAG+AGG + chr7_3:4292187-4292206 None:intergenic 35.0%
! CGATTGTGATTTTTCTCTGA+GGG + chr7_3:4292198-4292217 None:intergenic 35.0%
CCTCAGAGAAAAATCACAAT+CGG - chr7_3:4292196-4292215 Msa1090330:intron 35.0%
AAAGTGAGCTTACATGATGA+AGG + chr7_3:4292580-4292599 None:intergenic 35.0%
! GATTTTGGATCTCAGCTTAA+TGG - chr7_3:4292700-4292719 Msa1090330:intron 35.0%
GACATCCTTATGACTTTCAA+AGG - chr7_3:4293118-4293137 Msa1090330:intron 35.0%
! TGATGCCTTTGAAAGTCATA+AGG + chr7_3:4293126-4293145 None:intergenic 35.0%
TCATAGACCATTGTAGTTTC+AGG + chr7_3:4293155-4293174 None:intergenic 35.0%
AGAAACCTACACGAATCTAT+TGG + chr7_3:4293450-4293469 None:intergenic 35.0%
! GAATCTCAAAAGGGTGTAAT+AGG - chr7_3:4293741-4293760 Msa1090330:three_prime_UTR 35.0%
TCAGATAACAAACCTTGGTA+AGG - chr7_3:4293809-4293828 Msa1090330:three_prime_UTR 35.0%
! GCTTACCTTGATTTTGTAAG+TGG + chr7_3:4293970-4293989 None:intergenic 35.0%
AGGGTAAACATATGGTATGT+TGG + chr7_3:4294001-4294020 None:intergenic 35.0%
CATAAGATAATGCGACAAAG+AGG - chr7_3:4294061-4294080 Msa1090330:three_prime_UTR 35.0%
! CACTTCCGTTTTCATCTTAA+TGG + chr7_3:4294183-4294202 None:intergenic 35.0%
! GCATTTTCAGAAACAATGGA+AGG - chr7_3:4294609-4294628 Msa1090330:intron 35.0%
!! GTTCTTGGTTCTAAACTACT+TGG - chr7_3:4294682-4294701 Msa1090330:intron 35.0%
!! TCTTGGTTCTAAACTACTTG+GGG - chr7_3:4294684-4294703 Msa1090330:intron 35.0%
TTCTAAACTACTTGGGGTAA+GGG - chr7_3:4294690-4294709 Msa1090330:intron 35.0%
!!! GTTGGGAATTTTTCAAGCAA+AGG - chr7_3:4294735-4294754 Msa1090330:intron 35.0%
TGGTAGTTTAGCCTCTTAAA+AGG - chr7_3:4294877-4294896 Msa1090330:intron 35.0%
! CTGTAAGCATTCCTTTTAAG+AGG + chr7_3:4294891-4294910 None:intergenic 35.0%
AACACTGGTGCTTTCATATA+TGG + chr7_3:4295291-4295310 None:intergenic 35.0%
TGTAATCTTTATCTTACGCC+AGG + chr7_3:4295370-4295389 None:intergenic 35.0%
! GCAATTGATTTATTTCAGGC+TGG + chr7_3:4295602-4295621 None:intergenic 35.0%
! CGCTTTTCATTTACTTAGAC+GGG - chr7_3:4295660-4295679 Msa1090330:intron 35.0%
TCATCCACAATGAGCAAATA+TGG - chr7_3:4295769-4295788 Msa1090330:intron 35.0%
GTATTTGTTTAGGGGATATG+TGG - chr7_3:4295803-4295822 Msa1090330:intron 35.0%
ATTTGTTTAGGGGATATGTG+GGG - chr7_3:4295805-4295824 Msa1090330:intron 35.0%
ACAAATCTTCCCAATATTGG+AGG + chr7_3:4295961-4295980 None:intergenic 35.0%
CCTACAAATCTTCCCAATAT+TGG + chr7_3:4295964-4295983 None:intergenic 35.0%
CCAATATTGGGAAGATTTGT+AGG - chr7_3:4295961-4295980 Msa1090330:intron 35.0%
CATTTCTCCTTGGCATTATA+AGG + chr7_3:4296040-4296059 None:intergenic 35.0%
!! AATCAATGCTTGATTTGTGC+AGG - chr7_3:4296150-4296169 Msa1090330:intron 35.0%
!! ATCAATGCTTGATTTGTGCA+GGG - chr7_3:4296151-4296170 Msa1090330:intron 35.0%
!! TTGATTTGTGCAGGGTAAAT+GGG - chr7_3:4296159-4296178 Msa1090330:intron 35.0%
GGTCTGTATTGAATTTGAAC+TGG - chr7_3:4296307-4296326 Msa1090330:intron 35.0%
TTCCATATTAGTGTCATGTC+CGG + chr7_3:4296721-4296740 None:intergenic 35.0%
!! TATATCTGTTGGTGTCATGT+CGG - chr7_3:4296770-4296789 Msa1090330:intron 35.0%
CTATGTCGATATTAAAGGTG+TGG + chr7_3:4296826-4296845 None:intergenic 35.0%
AATATCGACATAGAGATGCA+TGG - chr7_3:4296833-4296852 Msa1090330:intron 35.0%
AACGAAGGATAGATCTTCAA+GGG + chr7_3:4296860-4296879 None:intergenic 35.0%
! TTTATAGGGCGCTTTCAATT+AGG + chr7_3:4296905-4296924 None:intergenic 35.0%
!! TTGAAAGCGCCCTATAAATT+TGG - chr7_3:4296907-4296926 Msa1090330:intron 35.0%
!! TGAAAGCGCCCTATAAATTT+GGG - chr7_3:4296908-4296927 Msa1090330:intron 35.0%
!! TGTGGTCAGTTGATAGTAAA+TGG - chr7_3:4296965-4296984 Msa1090330:intron 35.0%
AGGGACCTGATTGATATTAA+AGG - chr7_3:4297048-4297067 Msa1090330:intron 35.0%
!!! GACCAACTTCATTGTTTTAG+AGG - chr7_3:4297082-4297101 Msa1090330:intron 35.0%
!! GTGGTTTACTCGTTTTTAAC+CGG - chr7_3:4297148-4297167 Msa1090330:intron 35.0%
ATGAGAAAAATTCCTCAGGT+TGG + chr7_3:4297207-4297226 None:intergenic 35.0%
! TGATATAGTCGGTTTCTGAA+TGG - chr7_3:4297342-4297361 Msa1090330:intron 35.0%
TAGTGCATGGATAGATATTG+CGG + chr7_3:4297443-4297462 None:intergenic 35.0%
TAATGCCGTTGAATGATGAT+AGG - chr7_3:4297604-4297623 Msa1090330:intron 35.0%
! TCAAATTTAGAACCTACAGC+TGG + chr7_3:4297714-4297733 None:intergenic 35.0%
ACATTCTTCTGCTTGAAACT+AGG + chr7_3:4297793-4297812 None:intergenic 35.0%
TTTCAAGCAGAAGAATGTTC+TGG - chr7_3:4297795-4297814 Msa1090330:intron 35.0%
AAAGTTCTACAAGGCAACTT+GGG - chr7_3:4297821-4297840 Msa1090330:intron 35.0%
CGTCATGTATTTATCTCATG+TGG + chr7_3:4297924-4297943 None:intergenic 35.0%
ATACATGACGATGGATAATG+GGG - chr7_3:4297934-4297953 Msa1090330:intron 35.0%
AACTGAACTTGACTTTGCAT+TGG + chr7_3:4297993-4298012 None:intergenic 35.0%
TTAAATCTAGTCCAAAGACC+TGG - chr7_3:4298011-4298030 Msa1090330:intron 35.0%
!!! GTTGTTTTAATCCAGGTCTT+TGG + chr7_3:4298025-4298044 None:intergenic 35.0%
CTGGATTAAAACAACCATCA+GGG - chr7_3:4298030-4298049 Msa1090330:intron 35.0%
CAAAACTAGATCCTTCAACA+GGG + chr7_3:4298085-4298104 None:intergenic 35.0%
TCAAAACTAGATCCTTCAAC+AGG + chr7_3:4298086-4298105 None:intergenic 35.0%
TAGTCATATTAGAACCAGCA+GGG + chr7_3:4298197-4298216 None:intergenic 35.0%
TTAGTCATATTAGAACCAGC+AGG + chr7_3:4298198-4298217 None:intergenic 35.0%
TGAAGTTGAACCTCAAGTAT+CGG - chr7_3:4298344-4298363 Msa1090330:intron 35.0%
TGCAGAGATAAGTTGTCAAT+CGG - chr7_3:4298419-4298438 Msa1090330:intron 35.0%
CAGAAAATGAGAAAAACCTG+AGG + chr7_3:4298492-4298511 None:intergenic 35.0%
ATACATGTCTGTCTTACATG+TGG - chr7_3:4298621-4298640 Msa1090330:intron 35.0%
CAACCACTTCTGTTTATATC+CGG - chr7_3:4298782-4298801 Msa1090330:intron 35.0%
TTTCCGGATATAAACAGAAG+TGG + chr7_3:4298788-4298807 None:intergenic 35.0%
!! ATTCTTTGGAGTCACATTTC+CGG + chr7_3:4298804-4298823 None:intergenic 35.0%
!!! TCATTACCCTGAACCTTTTT+TGG - chr7_3:4298850-4298869 Msa1090330:intron 35.0%
!!! TGGTAAGTTATGGTTTTAGC+AGG - chr7_3:4298937-4298956 Msa1090330:intron 35.0%
GGTTCACATATCATGTTTCA+TGG + chr7_3:4299234-4299253 None:intergenic 35.0%
ACATGATATGTGACCCTATT+TGG - chr7_3:4299387-4299406 Msa1090330:intron 35.0%
! AAAATCTCATTTTCGCGACA+AGG + chr7_3:4299447-4299466 None:intergenic 35.0%
CAAATCATGTTTCGCATCAA+GGG + chr7_3:4299657-4299676 None:intergenic 35.0%
ACAAATCATGTTTCGCATCA+AGG + chr7_3:4299658-4299677 None:intergenic 35.0%
TGCCGAATACAAAACCAAAT+AGG + chr7_3:4299826-4299845 None:intergenic 35.0%
! AAATCTCGTTTTCGCGATAA+GGG + chr7_3:4300018-4300037 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG + chr7_3:4300019-4300038 None:intergenic 35.0%
CAAATCATGTTTCGCATCAA+GGG + chr7_3:4299657-4299676 None:intergenic 35.0%
ACAAATCATGTTTCGCATCA+AGG + chr7_3:4299658-4299677 None:intergenic 35.0%
TGCCGAATACAAAACCAAAT+AGG + chr7_3:4299826-4299845 None:intergenic 35.0%
! AAATCTCGTTTTCGCGATAA+GGG + chr7_3:4300018-4300037 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG + chr7_3:4300019-4300038 None:intergenic 35.0%
ACATGAGATGTGAACCTATT+TGG - chr7_3:4301204-4301223 Msa1090330:intron 35.0%
TGCCGAATAACAAACCAAAT+AGG + chr7_3:4301363-4301382 None:intergenic 35.0%
! AAATCTCGTTTTCGCGATAA+GGG + chr7_3:4300018-4300037 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG + chr7_3:4300019-4300038 None:intergenic 35.0%
CATATCATGTTTCGCATCAA+GGG + chr7_3:4300240-4300259 None:intergenic 35.0%
ACATATCATGTTTCGCATCA+AGG + chr7_3:4300241-4300260 None:intergenic 35.0%
! AGTATTGAAATGACCCTTGT+CGG - chr7_3:4300151-4300170 Msa1090330:intron 35.0%
TATCAAACTTGCAACCACAT+AGG + chr7_3:4301738-4301757 None:intergenic 35.0%
GTGGTTGCAAGTTTGATAAA+TGG - chr7_3:4301740-4301759 Msa1090330:intron 35.0%
!! TTTCACATAAAGGTACCTGA+GGG + chr7_3:4301770-4301789 None:intergenic 35.0%
!! ATTTCACATAAAGGTACCTG+AGG + chr7_3:4301771-4301790 None:intergenic 35.0%
! AGCCAAGTTTGTTTGGATTT+CGG - chr7_3:4301976-4301995 Msa1090330:intron 35.0%
TACCGAAATCCAAACAAACT+TGG + chr7_3:4301981-4302000 None:intergenic 35.0%
TTGTTTGGATTTCGGTAAAC+TGG - chr7_3:4301984-4302003 Msa1090330:intron 35.0%
! AAATCCAATTTTCGCGTCAA+GGG + chr7_3:4302205-4302224 None:intergenic 35.0%
! AAAATCCAATTTTCGCGTCA+AGG + chr7_3:4302206-4302225 None:intergenic 35.0%
GTTCTCAAACTTCTAAACGA+GGG + chr7_3:4302354-4302373 None:intergenic 35.0%
GTTTAGAAGTTTGAGAACGA+AGG - chr7_3:4302356-4302375 Msa1090330:CDS 35.0%
TTTCCAAACAAGGGTCATTA+AGG + chr7_3:4302465-4302484 None:intergenic 35.0%
! AATGACCCTTGTTTGGAAAA+TGG - chr7_3:4302466-4302485 Msa1090330:intron 35.0%
! TCGATCCATTTTCCAAACAA+GGG + chr7_3:4302474-4302493 None:intergenic 35.0%
! ATCGATCCATTTTCCAAACA+AGG + chr7_3:4302475-4302494 None:intergenic 35.0%
TTTGGAAAATGGATCGATAG+TGG - chr7_3:4302477-4302496 Msa1090330:intron 35.0%
TATCAAATACAACAGCCTAC+AGG + chr7_3:4302521-4302540 None:intergenic 35.0%
!! GTCAAGAGATCTTTCAAGTT+TGG - chr7_3:4302541-4302560 Msa1090330:intron 35.0%
TTCACATACGACAACAAACA+TGG - chr7_3:4302672-4302691 Msa1090330:intron 35.0%
! AACTTTATCTGCGACTGTTT+TGG - chr7_3:4302710-4302729 Msa1090330:intron 35.0%
TACAATTCGCCAACTTTCAT+TGG - chr7_3:4302755-4302774 Msa1090330:intron 35.0%
ACAATTCGCCAACTTTCATT+GGG - chr7_3:4302756-4302775 Msa1090330:intron 35.0%
! TACCTACCCTTTTAGATACA+AGG + chr7_3:4302785-4302804 None:intergenic 35.0%
AACCGTGAGTGTAACTAAAT+AGG + chr7_3:4302903-4302922 None:intergenic 35.0%
AGGTTGTGTAAAAAATGGGA+AGG - chr7_3:4303527-4303546 Msa1090330:CDS 35.0%
AAGAAAATACTTTGCTGCAG+AGG + chr7_3:4303556-4303575 None:intergenic 35.0%
TCATCTGAATCCAACAATGT+AGG - chr7_3:4303590-4303609 Msa1090330:CDS 35.0%
TAGGAAGACAATGCATCAAA+TGG - chr7_3:4303609-4303628 Msa1090330:CDS 35.0%
AGGAAGACAATGCATCAAAT+GGG - chr7_3:4303610-4303629 Msa1090330:CDS 35.0%
TGAACATGAAGTGTGAGAGA+TGG + chr7_3:4287804-4287823 None:intergenic 40.0%
! AGAATCGATTCTCAGAAGCT+AGG - chr7_3:4287969-4287988 Msa1090330:three_prime_UTR 40.0%
ACTCAATTCTACCAAAAGCC+AGG + chr7_3:4287998-4288017 None:intergenic 40.0%
TTGGTAGAATTGAGTTTGGG+AGG - chr7_3:4288003-4288022 Msa1090330:three_prime_UTR 40.0%
!!! TGGCTGTGATTTGTTTTTGC+AGG - chr7_3:4288656-4288675 Msa1090330:intron 40.0%
!! GCAGGTTTAAATGGTTTGCT+TGG - chr7_3:4288674-4288693 Msa1090330:three_prime_UTR 40.0%
TACTGCATCAGACATATCAC+AGG + chr7_3:4288842-4288861 None:intergenic 40.0%
! ATGTTGCTCTCCTTGTGTTT+TGG - chr7_3:4289014-4289033 Msa1090330:intron 40.0%
ATCTGATGCATTGTCTTGCA+TGG - chr7_3:4289159-4289178 Msa1090330:intron 40.0%
CTACATGGTGATAATCAGGA+TGG - chr7_3:4289396-4289415 Msa1090330:intron 40.0%
! GAAGCATTTCAGAAGAGTTC+AGG - chr7_3:4289493-4289512 Msa1090330:intron 40.0%
TCACCTGCATATTAGAGGTT+AGG - chr7_3:4289759-4289778 Msa1090330:intron 40.0%
CAGACTTGAAGGGATCAAAT+TGG - chr7_3:4289912-4289931 Msa1090330:intron 40.0%
TCACATGCAAGCTACACATA+TGG + chr7_3:4290016-4290035 None:intergenic 40.0%
AAGTTCAAAGAAGCTCTTCC+AGG - chr7_3:4290117-4290136 Msa1090330:intron 40.0%
TGTTGCATTTAAGCTACACC+TGG + chr7_3:4290138-4290157 None:intergenic 40.0%
ACTTGATTCAAGACCATGCT+TGG - chr7_3:4290157-4290176 Msa1090330:intron 40.0%
CCTGAAATCTTAACCAAGCA+TGG + chr7_3:4290173-4290192 None:intergenic 40.0%
CCATGCTTGGTTAAGATTTC+AGG - chr7_3:4290170-4290189 Msa1090330:intron 40.0%
TGAGTGTATTGAGTTCCGAT+TGG + chr7_3:4290420-4290439 None:intergenic 40.0%
CGGAACTCAATACACTCAAA+CGG - chr7_3:4290422-4290441 Msa1090330:intron 40.0%
!! GGCGTTTTATGGTGTTTTTG+GGG - chr7_3:4291192-4291211 Msa1090330:intron 40.0%
!!! TGCCCAGTTTTGGTGTTTTT+AGG - chr7_3:4291260-4291279 Msa1090330:intron 40.0%
CTGCCTAAAAACACCAAAAC+TGG + chr7_3:4291266-4291285 None:intergenic 40.0%
TAAAAGCAGATGGAAAGGAG+AGG + chr7_3:4292033-4292052 None:intergenic 40.0%
!! GGGTTTTATAGAGGAGATGA+AGG + chr7_3:4292178-4292197 None:intergenic 40.0%
! CCGATTGTGATTTTTCTCTG+AGG + chr7_3:4292199-4292218 None:intergenic 40.0%
GCGGATCTGAAAGAAAATAG+AGG + chr7_3:4292490-4292509 None:intergenic 40.0%
AACGTTGCCTGAAACTACAA+TGG - chr7_3:4293145-4293164 Msa1090330:intron 40.0%
AGCATCCAATAGATTCGTGT+AGG - chr7_3:4293442-4293461 Msa1090330:three_prime_UTR 40.0%
TTGTGTGCAGGAATCTCAAA+AGG - chr7_3:4293731-4293750 Msa1090330:three_prime_UTR 40.0%
TGTGTGCAGGAATCTCAAAA+GGG - chr7_3:4293732-4293751 Msa1090330:three_prime_UTR 40.0%
GTGGACAAAGGGTAAACATA+TGG + chr7_3:4294009-4294028 None:intergenic 40.0%
AGTCAGTAGAAGTGGACAAA+GGG + chr7_3:4294020-4294039 None:intergenic 40.0%
TAGTCAGTAGAAGTGGACAA+AGG + chr7_3:4294021-4294040 None:intergenic 40.0%
GCAATAGTAGTCAGTAGAAG+TGG + chr7_3:4294028-4294047 None:intergenic 40.0%
! GTTCTAAACTACTTGGGGTA+AGG - chr7_3:4294689-4294708 Msa1090330:intron 40.0%
TTCCAACTGCGAAAATGAAG+AGG - chr7_3:4295084-4295103 Msa1090330:intron 40.0%
! ATCCTCTTCATTTTCGCAGT+TGG + chr7_3:4295089-4295108 None:intergenic 40.0%
CTACAACAACATCACAACAC+TGG + chr7_3:4295306-4295325 None:intergenic 40.0%
GTCTCTGTATTAGAAAGCCA+TGG + chr7_3:4295525-4295544 None:intergenic 40.0%
GAAAGGAAAATGAGTCCAAG+AGG + chr7_3:4295624-4295643 None:intergenic 40.0%
ACGGGACAATCATTGAAAGT+AGG - chr7_3:4295697-4295716 Msa1090330:intron 40.0%
CGGGACAATCATTGAAAGTA+GGG - chr7_3:4295698-4295717 Msa1090330:intron 40.0%
GGGACAATCATTGAAAGTAG+GGG - chr7_3:4295699-4295718 Msa1090330:intron 40.0%
CGATCCATATTTGCTCATTG+TGG + chr7_3:4295776-4295795 None:intergenic 40.0%
TTTGTTTAGGGGATATGTGG+GGG - chr7_3:4295806-4295825 Msa1090330:intron 40.0%
TTGGAAGGATAGGAAGATGA+AGG - chr7_3:4295892-4295911 Msa1090330:intron 40.0%
TGGAAGGATAGGAAGATGAA+GGG - chr7_3:4295893-4295912 Msa1090330:intron 40.0%
TGAGACTCTCCTCCAATATT+GGG - chr7_3:4295949-4295968 Msa1090330:intron 40.0%
ACACAACACACATTTCTCCT+TGG + chr7_3:4296050-4296069 None:intergenic 40.0%
GTCTGATCTTCCTTTCATTG+AGG - chr7_3:4296068-4296087 Msa1090330:intron 40.0%
CAACTTCACTAACTACACCA+TGG + chr7_3:4296120-4296139 None:intergenic 40.0%
GTGTAGTTAGTGAAGTTGCA+TGG - chr7_3:4296122-4296141 Msa1090330:intron 40.0%
!! CTTGATTTGTGCAGGGTAAA+TGG - chr7_3:4296158-4296177 Msa1090330:intron 40.0%
TGTATGTTTGGGTGAGTGTT+TGG - chr7_3:4296242-4296261 Msa1090330:intron 40.0%
!! CTATTTCTATAGCAGCGAAC+AGG - chr7_3:4296672-4296691 Msa1090330:intron 40.0%
GAACGAAGGATAGATCTTCA+AGG + chr7_3:4296861-4296880 None:intergenic 40.0%
ACCTTATTGCAAGAGAGTAG+AGG - chr7_3:4297398-4297417 Msa1090330:intron 40.0%
ACCTCTACTCTCTTGCAATA+AGG + chr7_3:4297402-4297421 None:intergenic 40.0%
GGCAATTCGATGATTTCAGT+CGG - chr7_3:4297625-4297644 Msa1090330:intron 40.0%
GCAATTCGATGATTTCAGTC+GGG - chr7_3:4297626-4297645 Msa1090330:intron 40.0%
AACTTCCTTGTTGCTGAATC+GGG + chr7_3:4297691-4297710 None:intergenic 40.0%
GAACTTCCTTGTTGCTGAAT+CGG + chr7_3:4297692-4297711 None:intergenic 40.0%
! TTCTGGCTGAAAGTTCTACA+AGG - chr7_3:4297812-4297831 Msa1090330:intron 40.0%
GAAAGTTCTACAAGGCAACT+TGG - chr7_3:4297820-4297839 Msa1090330:intron 40.0%
AAGTTCTACAAGGCAACTTG+GGG - chr7_3:4297822-4297841 Msa1090330:intron 40.0%
TGGGGATAACATTGGTCAAA+AGG - chr7_3:4297840-4297859 Msa1090330:intron 40.0%
TATGTATAACAGTCGTGCAC+AGG - chr7_3:4297868-4297887 Msa1090330:three_prime_UTR 40.0%
!!! CCTGATGGTTGTTTTAATCC+AGG + chr7_3:4298032-4298051 None:intergenic 40.0%
CCTGGATTAAAACAACCATC+AGG - chr7_3:4298029-4298048 Msa1090330:intron 40.0%
GTGTGTGGCTTCATCTAAAA+TGG - chr7_3:4298052-4298071 Msa1090330:intron 40.0%
! GTTGAAGCATTCACCAATTG+TGG + chr7_3:4298156-4298175 None:intergenic 40.0%
CAATTGGTGAATGCTTCAAC+AGG - chr7_3:4298156-4298175 Msa1090330:intron 40.0%
AAACTTGACACTGATGCATC+TGG + chr7_3:4298294-4298313 None:intergenic 40.0%
GATAAGTTGTCAATCGGAAG+TGG - chr7_3:4298425-4298444 Msa1090330:intron 40.0%
! TTCTCATTTTCTGACTTCCC+TGG - chr7_3:4298499-4298518 Msa1090330:three_prime_UTR 40.0%
! TCTCATTTTCTGACTTCCCT+GGG - chr7_3:4298500-4298519 Msa1090330:three_prime_UTR 40.0%
GCTAGTCCAAAAAAGGTTCA+GGG + chr7_3:4298859-4298878 None:intergenic 40.0%
AGAAGATGCATCAGAAACAC+AGG + chr7_3:4299134-4299153 None:intergenic 40.0%
TTCGCATTAAGGGACATCAA+GGG + chr7_3:4299367-4299386 None:intergenic 40.0%
TTTCGCATTAAGGGACATCA+AGG + chr7_3:4299368-4299387 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG + chr7_3:4299938-4299957 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG + chr7_3:4299939-4299958 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG + chr7_3:4299938-4299957 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG + chr7_3:4299939-4299958 None:intergenic 40.0%
TAAACAGTGAACTTGTCCCT+CGG - chr7_3:4299628-4299647 Msa1090330:intron 40.0%
CATCTCATGTTTCGCATCAA+GGG + chr7_3:4301194-4301213 None:intergenic 40.0%
ACATCTCATGTTTCGCATCA+AGG + chr7_3:4301195-4301214 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG + chr7_3:4299938-4299957 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG + chr7_3:4299939-4299958 None:intergenic 40.0%
AAACTGGATGCAAGAGATTG+TGG - chr7_3:4302000-4302019 Msa1090330:intron 40.0%
! ATTTTCGCGACAACTGTCAT+CGG + chr7_3:4302104-4302123 None:intergenic 40.0%
CTTCTAAACGAGGGTCATAA+AGG + chr7_3:4302345-4302364 None:intergenic 40.0%
CGTTCTCAAACTTCTAAACG+AGG + chr7_3:4302355-4302374 None:intergenic 40.0%
AATATTTGACGCTTGCCTGT+AGG - chr7_3:4302503-4302522 Msa1090330:intron 40.0%
!!! GTTTTGGAAGAGACACTCAA+TGG - chr7_3:4302726-4302745 Msa1090330:intron 40.0%
TGGGACACCTTGTATCTAAA+AGG - chr7_3:4302775-4302794 Msa1090330:intron 40.0%
GGGACACCTTGTATCTAAAA+GGG - chr7_3:4302776-4302795 Msa1090330:intron 40.0%
CACCTTGTATCTAAAAGGGT+AGG - chr7_3:4302780-4302799 Msa1090330:intron 40.0%
CACGGTTATAGTCACATAAG+AGG - chr7_3:4302916-4302935 Msa1090330:intron 40.0%
AGGACAAAATGATGTACACC+TGG + chr7_3:4303343-4303362 None:intergenic 40.0%
! GGTGTACATCATTTTGTCCT+CGG - chr7_3:4303343-4303362 Msa1090330:intron 40.0%
GCATTGTCTTCCTACATTGT+TGG + chr7_3:4303603-4303622 None:intergenic 40.0%
! AAATCGCATTTTCGCGACAA+GGG + chr7_3:4303903-4303922 None:intergenic 40.0%
! AAAATCGCATTTTCGCGACA+AGG + chr7_3:4303904-4303923 None:intergenic 40.0%
AGGAGGAATGAAGGGTAGTA+GGG + chr7_3:4287734-4287753 None:intergenic 45.0%
AAGGAGGAATGAAGGGTAGT+AGG + chr7_3:4287735-4287754 None:intergenic 45.0%
AGCGCTAAATCTGGGTGATT+TGG - chr7_3:4287848-4287867 Msa1090330:three_prime_UTR 45.0%
TTCTCAGAAGCTAGGATTCC+TGG - chr7_3:4287977-4287996 Msa1090330:three_prime_UTR 45.0%
!! AAGCTAGGATTCCTGGCTTT+TGG - chr7_3:4287984-4288003 Msa1090330:three_prime_UTR 45.0%
TCCTAGGGTTTGCAAGAACT+CGG - chr7_3:4288130-4288149 Msa1090330:three_prime_UTR 45.0%
!! TTGGCCTTTGCACAAGCTTT+TGG - chr7_3:4288632-4288651 Msa1090330:intron 45.0%
! TGGCCTTTGCACAAGCTTTT+GGG - chr7_3:4288633-4288652 Msa1090330:intron 45.0%
! GGTGCTACATGGTGATAATC+AGG - chr7_3:4289392-4289411 Msa1090330:intron 45.0%
CCTCCTAACCTCTAATATGC+AGG + chr7_3:4289765-4289784 None:intergenic 45.0%
CCTGCATATTAGAGGTTAGG+AGG - chr7_3:4289762-4289781 Msa1090330:intron 45.0%
TCCGTTGTCTTCAGACTTGA+AGG - chr7_3:4289901-4289920 Msa1090330:intron 45.0%
CCCTTCAAGTCTGAAGACAA+CGG + chr7_3:4289905-4289924 None:intergenic 45.0%
CCGTTGTCTTCAGACTTGAA+GGG - chr7_3:4289902-4289921 Msa1090330:intron 45.0%
! TGTGTAGCTTGCATGTGACT+AGG - chr7_3:4290018-4290037 Msa1090330:intron 45.0%
! TTAGAGAGTGTGTGAGAGCT+AGG + chr7_3:4290338-4290357 None:intergenic 45.0%
!! CCTAACCTAGCTTTGAATCG+CGG - chr7_3:4290384-4290403 Msa1090330:intron 45.0%
TTGAACCGCGATTCAAAGCT+AGG + chr7_3:4290392-4290411 None:intergenic 45.0%
! GCTTTGAATCGCGGTTCAAT+CGG - chr7_3:4290393-4290412 Msa1090330:intron 45.0%
ACACTCAAACGGTGCTCAAA+TGG - chr7_3:4290433-4290452 Msa1090330:intron 45.0%
CAAGCCAAGCATGTAAGATG+AGG - chr7_3:4290924-4290943 Msa1090330:intron 45.0%
GTGATCTTCTAGCCAAGACT+TGG + chr7_3:4291445-4291464 None:intergenic 45.0%
ACAACCATCATCTTCTCCCT+TGG - chr7_3:4292099-4292118 Msa1090330:intron 45.0%
AGATCCAAGGGAGAAGATGA+TGG + chr7_3:4292106-4292125 None:intergenic 45.0%
TCATCTTCTCCCTTGGATCT+CGG - chr7_3:4292106-4292125 Msa1090330:intron 45.0%
! GATGAAGGGGAGTCTTTTTC+AGG + chr7_3:4292163-4292182 None:intergenic 45.0%
!! TGGAAGTGTCATTTCCGGTA+CGG + chr7_3:4292261-4292280 None:intergenic 45.0%
ACAACGTTATTCTGTCACGG+TGG + chr7_3:4292281-4292300 None:intergenic 45.0%
TCCGCAAAAAGCTTCGCTTT+CGG - chr7_3:4292511-4292530 Msa1090330:intron 45.0%
! ACCGAAAGCGAAGCTTTTTG+CGG + chr7_3:4292515-4292534 None:intergenic 45.0%
! GTCACTTTCAAGCTCAACCA+TGG - chr7_3:4292533-4292552 Msa1090330:intron 45.0%
AGCTCAACCATGGAGTTTAG+CGG - chr7_3:4292543-4292562 Msa1090330:intron 45.0%
! CGCCTTATTCACATCCACAA+GGG - chr7_3:4292637-4292656 Msa1090330:intron 45.0%
GACCCTTGTGGATGTGAATA+AGG + chr7_3:4292642-4292661 None:intergenic 45.0%
! GTTGTTGTTGCTGCATGTGT+GGG + chr7_3:4292664-4292683 None:intergenic 45.0%
! TGTTGTTGTTGCTGCATGTG+TGG + chr7_3:4292665-4292684 None:intergenic 45.0%
ATCTGATTCAAGCTGCAGAG+TGG + chr7_3:4293795-4293814 None:intergenic 45.0%
CTTAATGAAGAGGCGAGTGT+AGG + chr7_3:4295003-4295022 None:intergenic 45.0%
GGATAGGAAGATGAAGGGAT+TGG - chr7_3:4295898-4295917 Msa1090330:intron 45.0%
TAGGAAGATGAAGGGATTGG+AGG - chr7_3:4295901-4295920 Msa1090330:intron 45.0%
AGGAAGATGAAGGGATTGGA+GGG - chr7_3:4295902-4295921 Msa1090330:intron 45.0%
GTGAGACTCTCCTCCAATAT+TGG - chr7_3:4295948-4295967 Msa1090330:intron 45.0%
AGGGAGAGAACCTCAATGAA+AGG + chr7_3:4296081-4296100 None:intergenic 45.0%
GTGCAGGGTAAATGGGAAAA+TGG - chr7_3:4296166-4296185 Msa1090330:intron 45.0%
TGGCCTGCTTTGTGTATGTT+TGG - chr7_3:4296230-4296249 Msa1090330:intron 45.0%
GGCCTGCTTTGTGTATGTTT+GGG - chr7_3:4296231-4296250 Msa1090330:intron 45.0%
CACCCAAACATACACAAAGC+AGG + chr7_3:4296236-4296255 None:intergenic 45.0%
TAATTCTCTCGGAGAGACTC+AGG - chr7_3:4296591-4296610 Msa1090330:intron 45.0%
GACCCATGAAGTACAAACAC+CGG - chr7_3:4296699-4296718 Msa1090330:intron 45.0%
GTCCGGTGTTTGTACTTCAT+GGG + chr7_3:4296704-4296723 None:intergenic 45.0%
TGTCCGGTGTTTGTACTTCA+TGG + chr7_3:4296705-4296724 None:intergenic 45.0%
CACCGGACATGACACTAATA+TGG - chr7_3:4296716-4296735 Msa1090330:intron 45.0%
!!! TTATTTTGGGGACCAACCTG+AGG - chr7_3:4297192-4297211 Msa1090330:intron 45.0%
TCGGGAACCATTGAACTACA+AGG - chr7_3:4297644-4297663 Msa1090330:intron 45.0%
ACTTCCTTGTTGCTGAATCG+GGG + chr7_3:4297690-4297709 None:intergenic 45.0%
AACAAGGAAGTTCCAGCTGT+AGG - chr7_3:4297699-4297718 Msa1090330:intron 45.0%
AGGCAACTTGGGGATAACAT+TGG - chr7_3:4297832-4297851 Msa1090330:intron 45.0%
ATGGTTCCAAGCGTGACATT+AGG - chr7_3:4297894-4297913 Msa1090330:three_prime_UTR 45.0%
TGGTTCCAAGCGTGACATTA+GGG - chr7_3:4297895-4297914 Msa1090330:three_prime_UTR 45.0%
AAAACAACCATCAGGGTGTG+TGG - chr7_3:4298037-4298056 Msa1090330:intron 45.0%
ATGGCATCAATCCCTGTTGA+AGG - chr7_3:4298071-4298090 Msa1090330:intron 45.0%
TCTAATATGACAGACCCTGC+TGG - chr7_3:4298180-4298199 Msa1090330:intron 45.0%
TTGTCAATCGGAAGTGGAGA+TGG - chr7_3:4298431-4298450 Msa1090330:intron 45.0%
CAACTTAGCTGTCTCTGACT+CGG + chr7_3:4298469-4298488 None:intergenic 45.0%
TGTCTTACATGTGGCGATGT+AGG - chr7_3:4298630-4298649 Msa1090330:intron 45.0%
!! TGTAGGCTTTGAAGAGACGT+TGG - chr7_3:4298647-4298666 Msa1090330:intron 45.0%
GTAAAGCTTGTGCACTGCAT+AGG - chr7_3:4298685-4298704 Msa1090330:intron 45.0%
! GGCTAGTCCAAAAAAGGTTC+AGG + chr7_3:4298860-4298879 None:intergenic 45.0%
!! AGATGGGGCTAGTCCAAAAA+AGG + chr7_3:4298866-4298885 None:intergenic 45.0%
TTCGTATCAAGGGAGATCGA+GGG + chr7_3:4299789-4299808 None:intergenic 45.0%
TTTCGTATCAAGGGAGATCG+AGG + chr7_3:4299790-4299809 None:intergenic 45.0%
TTCGCATCAAGAGACATCGA+GGG + chr7_3:4300230-4300249 None:intergenic 45.0%
TTTCGCATCAAGAGACATCG+AGG + chr7_3:4300231-4300250 None:intergenic 45.0%
TTCGTATCAAGGGAGATCGA+GGG + chr7_3:4299789-4299808 None:intergenic 45.0%
TTTCGTATCAAGGGAGATCG+AGG + chr7_3:4299790-4299809 None:intergenic 45.0%
TTCGCATCAAGAGACATCGA+GGG + chr7_3:4300230-4300249 None:intergenic 45.0%
TTTCGCATCAAGAGACATCG+AGG + chr7_3:4300231-4300250 None:intergenic 45.0%
TTCGTATCAAGCGAGATCGA+GGG + chr7_3:4301326-4301345 None:intergenic 45.0%
TTTCGTATCAAGCGAGATCG+AGG + chr7_3:4301327-4301346 None:intergenic 45.0%
TTGATAAATGGGAAGCCCTC+AGG - chr7_3:4301752-4301771 Msa1090330:intron 45.0%
TTTCGCATCTAGGGATATCG+AGG + chr7_3:4301945-4301964 None:intergenic 45.0%
ATGACCCTTGACGCGAAAAT+TGG - chr7_3:4302198-4302217 Msa1090330:CDS 45.0%
! CAAGGTGTCCCAATGAAAGT+TGG + chr7_3:4302767-4302786 None:intergenic 45.0%
!! CTTTGCTGCTTTCATGTCAC+AGG - chr7_3:4302856-4302875 Msa1090330:CDS 45.0%
ACATAAGAGGAAGCAAGAGC+TGG - chr7_3:4302929-4302948 Msa1090330:intron 45.0%
AGCACATTATGTTCACACCG+AGG + chr7_3:4303363-4303382 None:intergenic 45.0%
TATGCATCAAGGGACATCGA+CGG + chr7_3:4303823-4303842 None:intergenic 45.0%
!!! TTAAAAGTATATTAATTTTT+GGG - chr7_3:4291611-4291630 Msa1090330:intron 5.0%
!!! TTTTATTTTTGTTTTAATTA+AGG - chr7_3:4292391-4292410 Msa1090330:intron 5.0%
!! TTATTATAAAATTGTTAAAT+AGG - chr7_3:4302061-4302080 Msa1090330:intron 5.0%
!! TATTATAAAATTGTTAAATA+GGG - chr7_3:4302062-4302081 Msa1090330:intron 5.0%
! TTTGAAGCGCTAGACTCGCT+CGG + chr7_3:4288047-4288066 None:intergenic 50.0%
TCTTGAAATCTCAGCGCGCA+AGG - chr7_3:4288107-4288126 Msa1090330:three_prime_UTR 50.0%
GGTTTGCAAGAACTCGGCTA+CGG - chr7_3:4288136-4288155 Msa1090330:three_prime_UTR 50.0%
CCACCCAAAAGCTTGTGCAA+AGG + chr7_3:4288639-4288658 None:intergenic 50.0%
! CCTTTGCACAAGCTTTTGGG+TGG - chr7_3:4288636-4288655 Msa1090330:intron 50.0%
ACGACGCATACACAGATGCA+TGG - chr7_3:4288900-4288919 Msa1090330:three_prime_UTR 50.0%
AGCACCTTGAGCAAGACAAG+AGG - chr7_3:4289370-4289389 Msa1090330:intron 50.0%
GCACCTTGAGCAAGACAAGA+GGG - chr7_3:4289371-4289390 Msa1090330:intron 50.0%
!! CAAGACAAGAGGGTGCTACA+TGG - chr7_3:4289381-4289400 Msa1090330:intron 50.0%
!! CCTGCTTTAAAGGAGAGCAG+TGG + chr7_3:4289524-4289543 None:intergenic 50.0%
!! CCACTGCTCTCCTTTAAAGC+AGG - chr7_3:4289521-4289540 Msa1090330:intron 50.0%
CACATATGGACTTCCCTGTC+TGG + chr7_3:4290002-4290021 None:intergenic 50.0%
GTGAGAGCTAGGTTAGGTTC+TGG + chr7_3:4290327-4290346 None:intergenic 50.0%
GAGTGTGTGAGAGCTAGGTT+AGG + chr7_3:4290333-4290352 None:intergenic 50.0%
CCGCGATTCAAAGCTAGGTT+AGG + chr7_3:4290387-4290406 None:intergenic 50.0%
GGTGTTCACCCAATCTGTTC+TGG - chr7_3:4290530-4290549 Msa1090330:intron 50.0%
! AGCTGTTCTGTGCCCAGTTT+TGG - chr7_3:4291250-4291269 Msa1090330:intron 50.0%
TTGTCTGTAATAGCCCCTGC+TGG - chr7_3:4291295-4291314 Msa1090330:intron 50.0%
TGTCTGTAATAGCCCCTGCT+GGG - chr7_3:4291296-4291315 Msa1090330:intron 50.0%
ACCAAAAACACCTACTGCCC+TGG + chr7_3:4291337-4291356 None:intergenic 50.0%
!!! AGGGCAGTAGGTGTTTTTGG+TGG - chr7_3:4291336-4291355 Msa1090330:intron 50.0%
TAGCTCCTGCAACCAAGTCT+TGG - chr7_3:4291430-4291449 Msa1090330:intron 50.0%
! TCTAGCCAAGACTTGGTTGC+AGG + chr7_3:4291438-4291457 None:intergenic 50.0%
AGGTAGCCGTGAACAGTGTA+CGG + chr7_3:4291963-4291982 None:intergenic 50.0%
AAGGCGGTCGGAAACATATG+AGG + chr7_3:4291983-4292002 None:intergenic 50.0%
CATATGTTTCCGACCGCCTT+TGG - chr7_3:4291983-4292002 Msa1090330:intron 50.0%
! GATGATGGCACAACCAAAGG+CGG + chr7_3:4291999-4292018 None:intergenic 50.0%
!! GGTGATGATGGCACAACCAA+AGG + chr7_3:4292002-4292021 None:intergenic 50.0%
TGGAAAGGAGAGGATGACGA+CGG + chr7_3:4292023-4292042 None:intergenic 50.0%
!! TTTTCTGGTGACCACCGTTC+CGG - chr7_3:4292223-4292242 Msa1090330:intron 50.0%
!! CACGGTGGAAGTGTCATTTC+CGG + chr7_3:4292266-4292285 None:intergenic 50.0%
! GAAAGCGAAGCTTTTTGCGG+AGG + chr7_3:4292512-4292531 None:intergenic 50.0%
AGATCTGCCGCTAAACTCCA+TGG + chr7_3:4292553-4292572 None:intergenic 50.0%
! GCGCCTTATTCACATCCACA+AGG - chr7_3:4292636-4292655 Msa1090330:intron 50.0%
!! TGTCTTCGTGCTGTTTGTCC+TGG + chr7_3:4293905-4293924 None:intergenic 50.0%
TTAGGGGATATGTGGGGGAT+AGG - chr7_3:4295811-4295830 Msa1090330:intron 50.0%
GGATATGTGGGGGATAGGAT+GGG - chr7_3:4295816-4295835 Msa1090330:intron 50.0%
GATATGTGGGGGATAGGATG+GGG - chr7_3:4295817-4295836 Msa1090330:intron 50.0%
ATATGTGGGGGATAGGATGG+GGG - chr7_3:4295818-4295837 Msa1090330:intron 50.0%
GGAAGATGAAGGGATTGGAG+GGG - chr7_3:4295903-4295922 Msa1090330:intron 50.0%
! TGGAGATTATGCTGGTGCCA+AGG - chr7_3:4297738-4297757 Msa1090330:three_prime_UTR 50.0%
AACAGTCGTGCACAGGATGA+TGG - chr7_3:4297875-4297894 Msa1090330:three_prime_UTR 50.0%
GGTTCCAAGCGTGACATTAG+GGG - chr7_3:4297896-4297915 Msa1090330:three_prime_UTR 50.0%
CTTGACACTGATGCATCTGG+CGG + chr7_3:4298291-4298310 None:intergenic 50.0%
ACTGGAGCTTCCGATACTTG+AGG + chr7_3:4298357-4298376 None:intergenic 50.0%
!! TCAAGTATCGGAAGCTCCAG+TGG - chr7_3:4298356-4298375 Msa1090330:intron 50.0%
!! GCAAGAGCATCAATCTCCAC+TGG + chr7_3:4298375-4298394 None:intergenic 50.0%
GGAGATTGATGCTCTTGCAG+AGG - chr7_3:4298377-4298396 Msa1090330:intron 50.0%
AGAGACAGCTAAGTTGCCTC+AGG - chr7_3:4298473-4298492 Msa1090330:three_prime_UTR 50.0%
TTCGCATCAAGGGACATCGA+GGG + chr7_3:4299647-4299666 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG + chr7_3:4299648-4299667 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG + chr7_3:4299647-4299666 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG + chr7_3:4299648-4299667 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG + chr7_3:4299647-4299666 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG + chr7_3:4299648-4299667 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG + chr7_3:4299647-4299666 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG + chr7_3:4299648-4299667 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG + chr7_3:4299647-4299666 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG + chr7_3:4299648-4299667 None:intergenic 50.0%
GCGCCTTAATGACCCTTGTT+TGG - chr7_3:4302459-4302478 Msa1090330:intron 50.0%
GCCGAGTTCTTGCAAACCCT+AGG + chr7_3:4288134-4288153 None:intergenic 55.0%
TTGCAAGAACTCGGCTACGG+CGG - chr7_3:4288139-4288158 Msa1090330:three_prime_UTR 55.0%
GCACCCTCTTGTCTTGCTCA+AGG + chr7_3:4289377-4289396 None:intergenic 55.0%
CGCGGTTCAATCGGTCCAAT+CGG - chr7_3:4290402-4290421 Msa1090330:intron 55.0%
!!! GGTGTTTTTGGGGCTGTTGC+TGG - chr7_3:4291202-4291221 Msa1090330:intron 55.0%
AGCTAAAACAGCGCCCAGCA+GGG + chr7_3:4291312-4291331 None:intergenic 55.0%
!! TTTTAGCTGGCCAGGGCAGT+AGG - chr7_3:4291324-4291343 Msa1090330:intron 55.0%
! GCCAGGGCAGTAGGTGTTTT+TGG - chr7_3:4291333-4291352 Msa1090330:intron 55.0%
!! CGGCTAGGGTTTGTTACAGG+GGG + chr7_3:4291940-4291959 None:intergenic 55.0%
!! GCGGCTAGGGTTTGTTACAG+GGG + chr7_3:4291941-4291960 None:intergenic 55.0%
!! GGCGGCTAGGGTTTGTTACA+GGG + chr7_3:4291942-4291961 None:intergenic 55.0%
TGAACAGTGTACGGCGGCTA+GGG + chr7_3:4291954-4291973 None:intergenic 55.0%
TAGCCGCCGTACACTGTTCA+CGG - chr7_3:4291954-4291973 Msa1090330:intron 55.0%
TAGCCGTGAACAGTGTACGG+CGG + chr7_3:4291960-4291979 None:intergenic 55.0%
ATGGCACAACCAAAGGCGGT+CGG + chr7_3:4291995-4292014 None:intergenic 55.0%
GAGGATGACGACGGTGATGA+TGG + chr7_3:4292014-4292033 None:intergenic 55.0%
CTACGATGGCCGAGATCCAA+GGG + chr7_3:4292118-4292137 None:intergenic 55.0%
TCTACGATGGCCGAGATCCA+AGG + chr7_3:4292119-4292138 None:intergenic 55.0%
GATGGTGATTTCCGGAACGG+TGG + chr7_3:4292237-4292256 None:intergenic 55.0%
GGCGATGGTGATTTCCGGAA+CGG + chr7_3:4292240-4292259 None:intergenic 55.0%
GGTACGGCGATGGTGATTTC+CGG + chr7_3:4292245-4292264 None:intergenic 55.0%
GGAAATCACCATCGCCGTAC+CGG - chr7_3:4292244-4292263 Msa1090330:intron 55.0%
! TGTCATTTCCGGTACGGCGA+TGG + chr7_3:4292255-4292274 None:intergenic 55.0%
! AGCGAAGCTTTTTGCGGAGG+CGG + chr7_3:4292509-4292528 None:intergenic 55.0%
GGGATATGTGGGGGATAGGA+TGG - chr7_3:4295815-4295834 Msa1090330:intron 55.0%
TGGGGGAGAGAGTGGATGAA+AGG - chr7_3:4295835-4295854 Msa1090330:intron 55.0%
AGCTCCCCGATTCAGCAACA+AGG - chr7_3:4297683-4297702 Msa1090330:intron 55.0%
! TATGCTGGTGCCAAGGATCG+CGG - chr7_3:4297745-4297764 Msa1090330:three_prime_UTR 55.0%
TGCCAAGGATCGCGGTTTCA+AGG - chr7_3:4297753-4297772 Msa1090330:three_prime_UTR 55.0%
CACCTTGAAACCGCGATCCT+TGG + chr7_3:4297758-4297777 None:intergenic 55.0%
CAAGGATCGCGGTTTCAAGG+TGG - chr7_3:4297756-4297775 Msa1090330:three_prime_UTR 55.0%
GATGAAGCCACACACCCTGA+TGG + chr7_3:4298047-4298066 None:intergenic 55.0%
TTCGCATCAAGGGACACCGA+GGG + chr7_3:4301184-4301203 None:intergenic 55.0%
TTTCGCATCAAGGGACACCG+AGG + chr7_3:4301185-4301204 None:intergenic 55.0%
ATCTCAGCGCGCAAGGTCCT+AGG - chr7_3:4288114-4288133 Msa1090330:three_prime_UTR 60.0%
TCTCAGCGCGCAAGGTCCTA+GGG - chr7_3:4288115-4288134 Msa1090330:three_prime_UTR 60.0%
TGCAAGAACTCGGCTACGGC+GGG - chr7_3:4288140-4288159 Msa1090330:three_prime_UTR 60.0%
GCTAAAACAGCGCCCAGCAG+GGG + chr7_3:4291311-4291330 None:intergenic 60.0%
CAGCTAAAACAGCGCCCAGC+AGG + chr7_3:4291313-4291332 None:intergenic 60.0%
!!! CTGCTGGGCGCTGTTTTAGC+TGG - chr7_3:4291311-4291330 Msa1090330:intron 60.0%
!!! GGCGCTGTTTTAGCTGGCCA+GGG - chr7_3:4291317-4291336 Msa1090330:intron 60.0%
!! CGGCGGCTAGGGTTTGTTAC+AGG + chr7_3:4291943-4291962 None:intergenic 60.0%
GTGAACAGTGTACGGCGGCT+AGG + chr7_3:4291955-4291974 None:intergenic 60.0%
CTGCATGTGTGGGACCCTTG+TGG + chr7_3:4292654-4292673 None:intergenic 60.0%
GGATAGGATGGGGGAGAGAG+TGG - chr7_3:4295827-4295846 Msa1090330:intron 60.0%
GGCTCCCCTAATGTCACGCT+TGG + chr7_3:4297903-4297922 None:intergenic 60.0%
CACTGATGCATCTGGCGGTG+CGG + chr7_3:4298286-4298305 None:intergenic 60.0%
!!! GGGCGCTGTTTTAGCTGGCC+AGG - chr7_3:4291316-4291335 Msa1090330:intron 65.0%
TCTGGCGGTGCGGATGCAAG+TGG + chr7_3:4298276-4298295 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 4287651 4304032 4287651 ID=Msa1090330;Name=Msa1090330
chr7_3 mRNA 4287651 4304032 4287651 ID=Msa1090330-mRNA-1;Parent=Msa1090330;Name=Msa1090330-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0.76|0.78|1|0.30|0.28|14|2446|210
chr7_3 exon 4287651 4288339 4287651 ID=Msa1090330-mRNA-1:exon:1612;Parent=Msa1090330-mRNA-1
chr7_3 exon 4288658 4288805 4288658 ID=Msa1090330-mRNA-1:exon:1611;Parent=Msa1090330-mRNA-1
chr7_3 exon 4288886 4288975 4288886 ID=Msa1090330-mRNA-1:exon:1610;Parent=Msa1090330-mRNA-1
chr7_3 exon 4289092 4289158 4289092 ID=Msa1090330-mRNA-1:exon:1609;Parent=Msa1090330-mRNA-1
chr7_3 exon 4292977 4293062 4292977 ID=Msa1090330-mRNA-1:exon:1608;Parent=Msa1090330-mRNA-1
chr7_3 exon 4293189 4294120 4293189 ID=Msa1090330-mRNA-1:exon:1607;Parent=Msa1090330-mRNA-1
chr7_3 exon 4297700 4297777 4297700 ID=Msa1090330-mRNA-1:exon:1606;Parent=Msa1090330-mRNA-1
chr7_3 exon 4297858 4297942 4297858 ID=Msa1090330-mRNA-1:exon:1605;Parent=Msa1090330-mRNA-1
chr7_3 exon 4298450 4298580 4298450 ID=Msa1090330-mRNA-1:exon:1604;Parent=Msa1090330-mRNA-1
chr7_3 exon 4299097 4299179 4299097 ID=Msa1090330-mRNA-1:exon:1603;Parent=Msa1090330-mRNA-1
chr7_3 exon 4302141 4302389 4302141 ID=Msa1090330-mRNA-1:exon:1602;Parent=Msa1090330-mRNA-1
chr7_3 exon 4302825 4302876 4302825 ID=Msa1090330-mRNA-1:exon:1601;Parent=Msa1090330-mRNA-1
chr7_3 exon 4303514 4303673 4303514 ID=Msa1090330-mRNA-1:exon:1600;Parent=Msa1090330-mRNA-1
chr7_3 exon 4303804 4304032 4303804 ID=Msa1090330-mRNA-1:exon:1599;Parent=Msa1090330-mRNA-1
chr7_3 CDS 4303804 4304032 4303804 ID=Msa1090330-mRNA-1:cds;Parent=Msa1090330-mRNA-1
chr7_3 CDS 4303514 4303673 4303514 ID=Msa1090330-mRNA-1:cds;Parent=Msa1090330-mRNA-1
chr7_3 CDS 4302825 4302876 4302825 ID=Msa1090330-mRNA-1:cds;Parent=Msa1090330-mRNA-1
chr7_3 CDS 4302198 4302389 4302198 ID=Msa1090330-mRNA-1:cds;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4302141 4302197 4302141 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4299097 4299179 4299097 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4298450 4298580 4298450 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4297858 4297942 4297858 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4297700 4297777 4297700 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4293189 4294120 4293189 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4292977 4293062 4292977 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4289092 4289158 4289092 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4288886 4288975 4288886 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4288658 4288805 4288658 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
chr7_3 three_prime_UTR 4287651 4288339 4287651 ID=Msa1090330-mRNA-1:three_prime_utr;Parent=Msa1090330-mRNA-1
Gene Sequence

>Msa1090330

ATGTTGCTGGGTACTCTCGGATTCTCCAGAACATTCAATTGGTTTTACTATATCTCCTTCTACAATCTAAAAACTCTTCACCCTACTACCCTTCATTCCTCCTTCTCTTATTTCTCAATTTTCTTCTTCAATTCTATCAATTGTCTTTATCCATCTCTCACACTTCATGTTCATTTTCGTTCACATGCAACAATTGAAGCGCTAAATCTGGGTGATTTGGCACAGATTAAATTGAGTTTGGGAGGCAGAATCGATATTCAGATCCGAGCGAGTCTAGCGCTTCAAACATTTCACCGTACAAACAATTCAAGGTCAAATGTATCTTCTCTTGAAATCTCAGCGCGCAAGGTCCTAGGGTTTGCAAGAACTCGGCTACGGCGGGATTTTCAGCTTATTCTTCTGAAATCTGTAGAGAAGAATACCTGTGATATGTCTGATGCAGTAAATGCGTTATCTCATATTGCTGAAGTGAAATTGAACTCTGATGGCCTTGCTGCCATTAAGAAATTGATACAAAAGCACCTTGAGCAAGACAAGAGGGTGCTACATGGTGATAATCAGGATGGAGAGACCACTGTTGACATGCTTGATAATTCATCTTCTTCCATAAATTCTTCAGACGAGAAAAATTAG

Protein sequence

>Msa1090330

MLLGTLGFSRTFNWFYYISFYNLKTLHPTTLHSSFSYFSIFFFNSINCLYPSLTLHVHFRSHATIEALNLGDLAQIKLSLGGRIDIQIRASLALQTFHRTNNSRSNVSSLEISARKVLGFARTRLRRDFQLILLKSVEKNTCDMSDAVNALSHIAEVKLNSDGLAAIKKLIQKHLEQDKRVLHGDNQDGETTVDMLDNSSSSINSSDEKN*