AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1090320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1090320 MtrunA17_Chr3g0119761 83.824 68 11 0 58 125 64 131 2.46e-34 115
Msa1090320 MtrunA17_Chr1g0211691 75.362 69 17 0 57 125 827 895 2.06e-27 105
Msa1090320 MtrunA17_Chr1g0211711 79.710 69 13 1 57 125 822 889 4.86e-27 104
Msa1090320 MtrunA17_Chr5g0420361 65.217 69 24 0 57 125 554 622 1.43e-22 91.7
Msa1090320 MtrunA17_Chr1g0183311 60.870 69 27 0 57 125 627 695 9.50e-20 83.6
Msa1090320 MtrunA17_Chr5g0426961 66.038 53 18 0 57 109 623 675 2.51e-14 68.2
Msa1090320 MtrunA17_Chr6g0472441 69.388 49 14 1 78 125 496 544 5.90e-13 64.3
Msa1090320 MtrunA17_Chr1g0211661 38.462 104 47 5 19 117 672 763 1.03e-11 60.5
Msa1090320 MtrunA17_Chr7g0231061 57.143 49 21 0 57 105 127 175 2.45e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 161 sgRNAs with CRISPR-Local

Find 924 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGAATTTACTTATTT+TGG 0.068037 7_3:+4243389 Msa1090320:three_prime_UTR
ACATAATATTTGAACCTATT+TGG 0.165996 7_3:+4253301 Msa1090320:three_prime_UTR
TTTCTCGTCTGAAGAATTTA+TGG 0.180309 7_3:-4238905 None:intergenic
TTGGCCTTTGCACAAGCTTT+TGG 0.185643 7_3:+4238080 Msa1090320:CDS
GGGTTACATGTTTGATAAAT+TGG 0.217858 7_3:+4253241 Msa1090320:three_prime_UTR
TGGGACACCTTGTATCTAAA+AGG 0.219415 7_3:+4252233 Msa1090320:three_prime_UTR
TAGGTTCTAAATTTGAAATT+TGG 0.240898 7_3:+4247169 Msa1090320:three_prime_UTR
TTCGGTAATTATAAAGTATT+AGG 0.259457 7_3:+4253331 Msa1090320:three_prime_UTR
GTTGGATTCAGATGATAAAT+AGG 0.265185 7_3:-4253040 None:intergenic
TCATAGACCATTGTAGTTTC+AGG 0.286390 7_3:-4242602 None:intergenic
GAACTTCCTTGTTGCTGAAT+CGG 0.301153 7_3:-4247140 None:intergenic
AAATACATGACGATGGATAA+TGG 0.308787 7_3:+4247383 Msa1090320:three_prime_UTR
AACTTCCTTGTTGCTGAATC+GGG 0.309232 7_3:-4247139 None:intergenic
GTGTGTGGCTTCACCTAAAA+TGG 0.310710 7_3:+4247503 Msa1090320:three_prime_UTR
TACAATTCGCCAACTTTCAT+TGG 0.311032 7_3:+4252213 Msa1090320:three_prime_UTR
AACCGAATACAAAACTAAAT+AGG 0.312099 7_3:-4253452 None:intergenic
GAATCTCAAAAGGGTGTAAT+AGG 0.312682 7_3:+4243192 Msa1090320:three_prime_UTR
AACTTTATCTGCGACTGTTT+TGG 0.316634 7_3:+4252168 Msa1090320:three_prime_UTR
AAGCTAGGATTCCTGGCTTT+TGG 0.322390 7_3:+4237432 Msa1090320:CDS
TACCGAATTTAAAACCAAAT+AGG 0.323650 7_3:-4253315 None:intergenic
TTCTCAGAAGCTAGGATTCC+TGG 0.340370 7_3:+4237425 Msa1090320:CDS
AGAGTTGGATCTTTCAAGTT+TGG 0.344503 7_3:+4251999 Msa1090320:three_prime_UTR
AACCGTGAGTGTAACTAAAT+AGG 0.356359 7_3:-4252358 None:intergenic
ATGGTTCCAAGCGTGACATT+AGG 0.359515 7_3:+4247345 Msa1090320:three_prime_UTR
TCTCCAAAATAAGTAAATTC+TGG 0.362321 7_3:-4243392 None:intergenic
TGGTTCCAAGCGTGACATTA+GGG 0.364051 7_3:+4247346 Msa1090320:three_prime_UTR
AATACATGACGATGGATAAT+GGG 0.374168 7_3:+4247384 Msa1090320:three_prime_UTR
TCAAAACTAGATCCTTCAAC+AGG 0.378708 7_3:-4247534 None:intergenic
GAAGCATTTCAGAAGAGTTC+AGG 0.380408 7_3:+4238941 Msa1090320:three_prime_UTR
TTTCAAGCAGAAGAATGTTC+TGG 0.381610 7_3:+4247246 Msa1090320:three_prime_UTR
GCATTGTCTTCCTACATTGT+TGG 0.387969 7_3:-4253058 None:intergenic
ATCGATTCTCAATTTGTTGT+TGG 0.391334 7_3:-4237403 None:intergenic
TCGATTCTCAATTTGTTGTT+GGG 0.400339 7_3:-4237402 None:intergenic
TAGGAAGACAATGCATCAAA+TGG 0.400920 7_3:+4253067 Msa1090320:three_prime_UTR
ATACAAAGCTTCTTTATTGA+CGG 0.409686 7_3:+4253096 Msa1090320:three_prime_UTR
AAAACGGAATAAAATGAATT+CGG 0.413465 7_3:+4237370 None:intergenic
GATAAATTGGAAGTTTGAAC+TGG 0.414196 7_3:+4253254 Msa1090320:three_prime_UTR
TTCAATATGCAGTCTTATCA+AGG 0.421472 7_3:+4253127 Msa1090320:three_prime_UTR
GGTGCTACATGGTGATAATC+AGG 0.426928 7_3:+4238840 Msa1090320:CDS
CACCTTGAAACCGCGATCCT+TGG 0.431343 7_3:-4247206 None:intergenic
AAATATTATGTTATGCATCA+AGG 0.435058 7_3:-4253289 None:intergenic
ATCTCAGCGCGCAAGGTCCT+AGG 0.435679 7_3:+4237562 Msa1090320:intron
CTATGAAACTTGTTGTTGAA+TGG 0.436799 7_3:+4242619 Msa1090320:three_prime_UTR
TTGTGTGCAGGAATCTCAAA+AGG 0.437894 7_3:+4243182 Msa1090320:intron
AAGAGAGTCACTAAAATTCA+AGG 0.442926 7_3:-4252882 None:intergenic
ATCATACAAAAGCAAATTCA+AGG 0.445622 7_3:+4252431 Msa1090320:three_prime_UTR
GAAAGTTCTACAAGGCAACT+TGG 0.449663 7_3:+4247271 Msa1090320:three_prime_UTR
AAAGAATAATCAGCCACAAT+TGG 0.453496 7_3:+4247591 Msa1090320:three_prime_UTR
TGGGGATAACATTGGTCAAA+AGG 0.454960 7_3:+4247291 Msa1090320:three_prime_UTR
ACATTCTTCTGCTTGAAACT+AGG 0.456561 7_3:-4247241 None:intergenic
AAAGTTCTACAAGGCAACTT+GGG 0.465977 7_3:+4247272 Msa1090320:three_prime_UTR
TATGTAGATCATGTTCAGTT+AGG 0.466456 7_3:-4247771 None:intergenic
ACAATTCGCCAACTTTCATT+GGG 0.468607 7_3:+4252214 Msa1090320:three_prime_UTR
AAACTTGACACTGATGCATC+TGG 0.469022 7_3:-4247742 None:intergenic
TGATGCCTTTGAAAGTCATA+AGG 0.471406 7_3:-4242573 None:intergenic
TAATAATTACTAATGTAGTA+AGG 0.472023 7_3:+4252965 Msa1090320:three_prime_UTR
AAAACTATTATAGAGGTGGT+TGG 0.473044 7_3:+4247027 Msa1090320:three_prime_UTR
TGTCTTACATGTGGCGATGT+AGG 0.476362 7_3:+4248079 Msa1090320:three_prime_UTR
AACTGAACTTGACTTTGCAT+TGG 0.476913 7_3:-4247441 None:intergenic
CAATTGGTGAATGCTTCAAC+AGG 0.476955 7_3:+4247607 Msa1090320:three_prime_UTR
AGAGACAGCTAAGTTGCCTC+AGG 0.477807 7_3:+4247924 Msa1090320:three_prime_UTR
TTGAAATTTGGAGATTATGC+TGG 0.486444 7_3:+4247181 Msa1090320:three_prime_UTR
TGCAAGAACTCGGCTACGGC+GGG 0.488925 7_3:+4237588 Msa1090320:CDS
CACGGTTATAGTCACATAAG+AGG 0.495209 7_3:+4252374 Msa1090320:three_prime_UTR
CCTGGATTAAAACAACCATC+AGG 0.495537 7_3:+4247480 Msa1090320:three_prime_UTR
TGCCAAGGATCGCGGTTTCA+AGG 0.495555 7_3:+4247204 Msa1090320:three_prime_UTR
ACATAAGAGGAAGCAAGAGC+TGG 0.497961 7_3:+4252387 Msa1090320:three_prime_UTR
TGCAGAGATAAGTTGTCAAT+CGG 0.499359 7_3:+4247870 Msa1090320:three_prime_UTR
TAGCATCAAACCTTATTCAA+TGG 0.504256 7_3:-4252472 None:intergenic
AAGATGCTAATTAGCTACTA+AGG 0.505530 7_3:-4243220 None:intergenic
AACAGTCGTGCACAGGATGA+TGG 0.506773 7_3:+4247326 Msa1090320:three_prime_UTR
AAAGATCCAACTCTAACTCT+TGG 0.506986 7_3:-4251990 None:intergenic
TAATGCCGTTGAATGATGAT+AGG 0.510919 7_3:+4247055 Msa1090320:three_prime_UTR
ATGGCATCAATCCCTGTTGA+AGG 0.511007 7_3:+4247522 Msa1090320:three_prime_UTR
TCAAATTTAGAACCTACAGC+TGG 0.513724 7_3:-4247162 None:intergenic
GCAAGAGCATCAATCTCCAC+TGG 0.514196 7_3:-4247823 None:intergenic
TTGTCAATCGGAAGTGGAGA+TGG 0.519404 7_3:+4247882 Msa1090320:three_prime_UTR
GATAAGTTGTCAATCGGAAG+TGG 0.524889 7_3:+4247876 Msa1090320:three_prime_UTR
GGCTCCCCTAATGTCACGCT+TGG 0.526509 7_3:-4247351 None:intergenic
GGGACACCTTGTATCTAAAA+GGG 0.527015 7_3:+4252234 Msa1090320:three_prime_UTR
AGGAAGACAATGCATCAAAT+GGG 0.527537 7_3:+4253068 Msa1090320:three_prime_UTR
TGATAGCCAAGAGTTAGAGT+TGG 0.528815 7_3:+4251984 Msa1090320:three_prime_UTR
AATATTATGTTATGCATCAA+GGG 0.534580 7_3:-4253288 None:intergenic
GCACCCTCTTGTCTTGCTCA+AGG 0.536107 7_3:-4238822 None:intergenic
TCTAATATGACAGACCCTGC+TGG 0.537237 7_3:+4247631 Msa1090320:three_prime_UTR
GTAAAGCTTGTGCACTGCAT+AGG 0.540182 7_3:+4248134 Msa1090320:three_prime_UTR
TCCTAGGGTTTGCAAGAACT+CGG 0.540523 7_3:+4237578 Msa1090320:CDS
GACATCCTTATGACTTTCAA+AGG 0.540571 7_3:+4242568 Msa1090320:three_prime_UTR
AGAATCGATTCTCAGAAGCT+AGG 0.540602 7_3:+4237417 Msa1090320:CDS
TCATCTGAATCCAACAATGT+AGG 0.544444 7_3:+4253048 Msa1090320:three_prime_UTR
GATTACCACTTACAAAATCA+AGG 0.544502 7_3:+4243413 Msa1090320:three_prime_UTR
GGCAATTCGATGATTTCAGT+CGG 0.548679 7_3:+4247076 Msa1090320:three_prime_UTR
TTTCAAAACTATTATAGAGG+TGG 0.551598 7_3:+4247023 Msa1090320:three_prime_UTR
AGCTCAACCATGGAGTTTAG+CGG 0.551609 7_3:+4241993 Msa1090320:three_prime_UTR
GCAATTCGATGATTTCAGTC+GGG 0.552297 7_3:+4247077 Msa1090320:three_prime_UTR
TTAGTCATATTAGAACCAGC+AGG 0.552780 7_3:-4247646 None:intergenic
CAAGGTGTCCCAATGAAAGT+TGG 0.554413 7_3:-4252222 None:intergenic
ACTCAATTCTACCAAAAGCC+AGG 0.557101 7_3:-4237443 None:intergenic
TCTCAGCGCGCAAGGTCCTA+GGG 0.559527 7_3:+4237563 Msa1090320:intron
AAAGTGAGCTTACATGATGA+AGG 0.561482 7_3:-4242027 None:intergenic
AAGAAAATACTTTGCTGCAG+AGG 0.562763 7_3:-4253011 None:intergenic
GTTGAAGCATTCACCAATTG+TGG 0.562816 7_3:-4247604 None:intergenic
GTCACTTTCAAGCTCAACCA+TGG 0.563416 7_3:+4241983 Msa1090320:three_prime_UTR
GAAGTGAAATTGAACTCTGA+TGG 0.566558 7_3:+4238766 Msa1090320:CDS
CGTCATGTATTTATCTCATG+TGG 0.570168 7_3:-4247372 None:intergenic
TATGTATAACAGTCGTGCAC+AGG 0.572185 7_3:+4247319 Msa1090320:three_prime_UTR
TTCCTATTTAGTTACACTCA+CGG 0.574912 7_3:+4252356 Msa1090320:three_prime_UTR
TTGAATCAGATAACAAACCT+TGG 0.575230 7_3:+4243255 Msa1090320:three_prime_UTR
CAAGACAAGAGGGTGCTACA+TGG 0.575858 7_3:+4238829 Msa1090320:CDS
CCACTGCTCTCCTTTAAAGC+AGG 0.579600 7_3:+4238969 Msa1090320:three_prime_UTR
ACTGGAGCTTCCGATACTTG+AGG 0.579857 7_3:-4247805 None:intergenic
ACTTCCTTGTTGCTGAATCG+GGG 0.580257 7_3:-4247138 None:intergenic
TGGAGATTATGCTGGTGCCA+AGG 0.580644 7_3:+4247189 Msa1090320:three_prime_UTR
TGAAGTTGAACCTCAAGTAT+CGG 0.581112 7_3:+4247795 Msa1090320:three_prime_UTR
TCGCCACATGTAAGACAGAC+AGG 0.584201 7_3:-4248073 None:intergenic
AGATCTGCCGCTAAACTCCA+TGG 0.584643 7_3:-4242000 None:intergenic
TTGCAAGAACTCGGCTACGG+CGG 0.586253 7_3:+4237587 Msa1090320:CDS
CAACTTAGCTGTCTCTGACT+CGG 0.587029 7_3:-4247917 None:intergenic
CTATTTCTAACTGATTCGAA+TGG 0.587342 7_3:+4242662 Msa1090320:three_prime_UTR
GCACCTTGAGCAAGACAAGA+GGG 0.592480 7_3:+4238819 Msa1090320:CDS
TCAAGTATCGGAAGCTCCAG+TGG 0.598462 7_3:+4247807 Msa1090320:three_prime_UTR
TCTTGAAATCTCAGCGCGCA+AGG 0.599323 7_3:+4237555 Msa1090320:intron
CACTGATGCATCTGGCGGTG+CGG 0.604862 7_3:-4247734 None:intergenic
AGCTCCCCGATTCAGCAACA+AGG 0.608377 7_3:+4247134 Msa1090320:three_prime_UTR
AAAACAACCATCAGGGTGTG+TGG 0.612294 7_3:+4247488 Msa1090320:three_prime_UTR
CAAAACTAGATCCTTCAACA+GGG 0.613617 7_3:-4247533 None:intergenic
CCTGCTTTAAAGGAGAGCAG+TGG 0.616732 7_3:-4238969 None:intergenic
TTCTGGCTGAAAGTTCTACA+AGG 0.619073 7_3:+4247263 Msa1090320:three_prime_UTR
CCAAAATAAGTAAATTCTGG+AGG 0.619991 7_3:-4243389 None:intergenic
TATGCTGGTGCCAAGGATCG+CGG 0.620538 7_3:+4247196 Msa1090320:three_prime_UTR
GGTGAAGCCACACACCCTGA+TGG 0.621745 7_3:-4247495 None:intergenic
TCAATTTCTTAATGGCAGCA+AGG 0.626798 7_3:-4238789 None:intergenic
TTAAATCTAGTCCAAAGACC+TGG 0.626898 7_3:+4247462 Msa1090320:three_prime_UTR
CTACATGGTGATAATCAGGA+TGG 0.630222 7_3:+4238844 Msa1090320:CDS
AGCACCTTGAGCAAGACAAG+AGG 0.633713 7_3:+4238818 Msa1090320:CDS
CCACCCAAAAGCTTGTGCAA+AGG 0.634474 7_3:-4238084 None:intergenic
GCCGAGTTCTTGCAAACCCT+AGG 0.636535 7_3:-4237579 None:intergenic
TGTGTGCAGGAATCTCAAAA+GGG 0.637356 7_3:+4243183 Msa1090320:intron
ATACATGACGATGGATAATG+GGG 0.639350 7_3:+4247385 Msa1090320:three_prime_UTR
GGTTTGCAAGAACTCGGCTA+CGG 0.640660 7_3:+4237584 Msa1090320:CDS
TGTAGGCTTTGAAGAGACGT+TGG 0.640799 7_3:+4248096 Msa1090320:three_prime_UTR
AATTGCCTATCATCATTCAA+CGG 0.641039 7_3:-4247060 None:intergenic
ATGAGATAAATACATGACGA+TGG 0.642316 7_3:+4247376 Msa1090320:three_prime_UTR
AAGTTCTACAAGGCAACTTG+GGG 0.642391 7_3:+4247273 Msa1090320:three_prime_UTR
AACGTTGCCTGAAACTACAA+TGG 0.642558 7_3:+4242595 Msa1090320:three_prime_UTR
TCTGGCGGTGCGGATGCAAG+TGG 0.645216 7_3:-4247724 None:intergenic
TCGGGAACCATTGAACTACA+AGG 0.645879 7_3:+4247095 Msa1090320:three_prime_UTR
AACAAGGAAGTTCCAGCTGT+AGG 0.646193 7_3:+4247150 Msa1090320:three_prime_UTR
CTTGAAATCATGAAAACATG+AGG 0.646444 7_3:+4247418 Msa1090320:three_prime_UTR
GGAGATTGATGCTCTTGCAG+AGG 0.647925 7_3:+4247828 Msa1090320:three_prime_UTR
TAGTCATATTAGAACCAGCA+GGG 0.651331 7_3:-4247645 None:intergenic
AGGCAACTTGGGGATAACAT+TGG 0.652222 7_3:+4247283 Msa1090320:three_prime_UTR
ATACCTGTCTGTCTTACATG+TGG 0.664257 7_3:+4248070 Msa1090320:three_prime_UTR
GGTTCCAAGCGTGACATTAG+GGG 0.666584 7_3:+4247347 Msa1090320:three_prime_UTR
ATCTGATTCAAGCTGCAGAG+TGG 0.677129 7_3:-4243243 None:intergenic
CTGGATTAAAACAACCATCA+GGG 0.680238 7_3:+4247481 Msa1090320:three_prime_UTR
ATTATCAAGCATGTCAACAG+TGG 0.685664 7_3:-4238872 None:intergenic
CTTGACACTGATGCATCTGG+CGG 0.686581 7_3:-4247739 None:intergenic
TATGCATCAAGGGACATCGA+CGG 0.697608 7_3:-4253278 None:intergenic
CAAGGATCGCGGTTTCAAGG+TGG 0.714835 7_3:+4247207 Msa1090320:three_prime_UTR
AGCACATTATGTTCACACCG+AGG 0.784095 7_3:-4252818 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAAGAATGTTT+AGG + chr7_3:4240015-4240034 Msa1090320:intron 10.0%
!!! CATTTTAATTACAATAAATA+TGG + chr7_3:4240840-4240859 Msa1090320:intron 10.0%
!!! AGAAAAGTATATTAATTTTT+GGG + chr7_3:4241038-4241057 Msa1090320:intron 10.0%
!!! GTTAAAAGTATATTAATTTT+TGG + chr7_3:4241060-4241079 Msa1090320:intron 10.0%
!!! AAATATCAAATAATAGATTT+TGG + chr7_3:4242135-4242154 Msa1090320:intron 10.0%
!! AAAAAAAATAAAGTTTGATA+TGG + chr7_3:4242398-4242417 Msa1090320:intron 10.0%
!! TTTAAATTCTATTATCAATA+GGG - chr7_3:4244875-4244894 None:intergenic 10.0%
!!! TTATTTTAAATTTTGTTCTT+TGG + chr7_3:4245311-4245330 Msa1090320:intron 10.0%
!! AAATTATGAATATTTCAAAA+CGG - chr7_3:4246565-4246584 None:intergenic 10.0%
!!! TAACAATTTTATAATAAACT+AGG - chr7_3:4251506-4251525 None:intergenic 10.0%
!!! TTATGAATGATATTTTTTAA+TGG + chr7_3:4252757-4252776 Msa1090320:intron 10.0%
!! ATTAGTTGAATCATTATATA+AGG + chr7_3:4238518-4238537 Msa1090320:intron 15.0%
!! GAAAGATTAAATAAAATAGT+TGG - chr7_3:4240968-4240987 None:intergenic 15.0%
!!! CAGAAAAGTATATTAATTTT+TGG + chr7_3:4241037-4241056 Msa1090320:intron 15.0%
!!! ATTTTATCTCCTTAAAAAAA+TGG + chr7_3:4241233-4241252 Msa1090320:intron 15.0%
!! TAAAATTAAACGAGAAAAAA+TGG - chr7_3:4241298-4241317 None:intergenic 15.0%
!! TACATATCATAAACAAATAT+TGG - chr7_3:4242222-4242241 None:intergenic 15.0%
!!! TCTTTATGAAGAATTTTTTT+TGG + chr7_3:4242279-4242298 Msa1090320:intron 15.0%
!!! AATGTATTATGAACATTTTT+AGG + chr7_3:4242531-4242550 Msa1090320:intron 15.0%
!! ATATTGGATTATAAAATCAA+AGG + chr7_3:4243078-4243097 Msa1090320:intron 15.0%
!!! AAAAGTGAATTTTAAGTTAT+AGG - chr7_3:4243148-4243167 None:intergenic 15.0%
!! AATAATTCTAATCGAAATAA+TGG + chr7_3:4243726-4243745 Msa1090320:intron 15.0%
!! AATTGAAATACATGTTTATT+AGG - chr7_3:4243787-4243806 None:intergenic 15.0%
!! ACCTTCAATAAAATAAAATA+AGG + chr7_3:4243975-4243994 Msa1090320:intron 15.0%
!!! TCCTTATTTTATTTTATTGA+AGG - chr7_3:4243979-4243998 None:intergenic 15.0%
!!! CACTTAATTTTTTTGATAAT+TGG + chr7_3:4243999-4244018 Msa1090320:intron 15.0%
!!! CTTTTTAACATATCATTTTA+TGG - chr7_3:4244582-4244601 None:intergenic 15.0%
!! GTTTAAATTCTATTATCAAT+AGG - chr7_3:4244876-4244895 None:intergenic 15.0%
!!! TCTAAAATTTTCTTATATGT+TGG + chr7_3:4245985-4246004 Msa1090320:intron 15.0%
!! ATTATACATAACTGATTATA+TGG - chr7_3:4246103-4246122 None:intergenic 15.0%
!! TGATATTAAAGGTTAAATAT+AGG + chr7_3:4246510-4246529 Msa1090320:intron 15.0%
!! GATATTAAAGGTTAAATATA+GGG + chr7_3:4246511-4246530 Msa1090320:intron 15.0%
!!! TACTAATTTTGTTGTTATTT+TGG + chr7_3:4246629-4246648 Msa1090320:intron 15.0%
!!! ACTAATTTTGTTGTTATTTT+GGG + chr7_3:4246630-4246649 Msa1090320:intron 15.0%
!! GGTATATATAATTATTCTAA+TGG + chr7_3:4246814-4246833 Msa1090320:intron 15.0%
!!! TGTATCATTTTAATATTCTT+TGG - chr7_3:4248267-4248286 None:intergenic 15.0%
!! ATCTTATATATTAGTTAAGA+TGG + chr7_3:4248362-4248381 Msa1090320:intron 15.0%
!! TTACCAAATTTAAAAGAAAT+TGG - chr7_3:4250970-4250989 None:intergenic 15.0%
!! TTTAAATTTGGTAAATAGAA+AGG + chr7_3:4249431-4249450 Msa1090320:intron 15.0%
!! AAATATCATATTTCACATAA+AGG - chr7_3:4251228-4251247 None:intergenic 15.0%
!!! AACCTATTTTGTTTTAAATT+TGG + chr7_3:4251249-4251268 Msa1090320:intron 15.0%
!!! TACCAAATTTAAAACAAAAT+AGG - chr7_3:4251254-4251273 None:intergenic 15.0%
!!! AAATGCTAAAATTTCATTTT+CGG - chr7_3:4251331-4251350 None:intergenic 15.0%
!!! AAATGAAATTTTAGCATTTA+TGG + chr7_3:4251332-4251351 Msa1090320:intron 15.0%
!!! TTCAAAGTACTTTTAAATTT+GGG - chr7_3:4252581-4252600 None:intergenic 15.0%
!!! ATTCAAAGTACTTTTAAATT+TGG - chr7_3:4252582-4252601 None:intergenic 15.0%
!!! GTTTAAAATTTTGAATAAGT+AGG + chr7_3:4252700-4252719 Msa1090320:intron 15.0%
!! TAATAATTACTAATGTAGTA+AGG + chr7_3:4252965-4252984 Msa1090320:three_prime_UTR 15.0%
!! AAGATTCAAAATCATAGAAT+GGG - chr7_3:4237688-4237707 None:intergenic 20.0%
!! CAAAATCAGAATTGATAAAA+AGG - chr7_3:4237789-4237808 None:intergenic 20.0%
!!! TTTATCAATTCTGATTTTGT+TGG + chr7_3:4237790-4237809 Msa1090320:intron 20.0%
!!! TTATCAATTCTGATTTTGTT+GGG + chr7_3:4237791-4237810 Msa1090320:intron 20.0%
!!! GTTATATGTAATTGTGTTTT+TGG + chr7_3:4237828-4237847 Msa1090320:intron 20.0%
!!! AAACTTGTTTCTTTTGTAAT+TGG + chr7_3:4238711-4238730 Msa1090320:intron 20.0%
!!! CTTTTGTATCAATTTCTTAA+TGG - chr7_3:4238800-4238819 None:intergenic 20.0%
!! GAACCAAACAAAAAAATTAA+TGG - chr7_3:4239052-4239071 None:intergenic 20.0%
!! TTCAAATAAATGATAGACAA+AGG - chr7_3:4239138-4239157 None:intergenic 20.0%
!! CTATCATTTATTTGAATCAT+AGG + chr7_3:4239142-4239161 Msa1090320:intron 20.0%
!!! GTATTTTGGAGTTTTTATAT+GGG - chr7_3:4240311-4240330 None:intergenic 20.0%
!! CTTGAATGATAAAATAACAT+TGG - chr7_3:4240358-4240377 None:intergenic 20.0%
!!! TTACACATTTTATCAAGATT+GGG + chr7_3:4240610-4240629 Msa1090320:intron 20.0%
!!! AAAGTATATTAATTTTTGGG+AGG + chr7_3:4241041-4241060 Msa1090320:intron 20.0%
!! TGTACATTTAAATTAACTCT+TGG + chr7_3:4241092-4241111 Msa1090320:intron 20.0%
!! ACTATTCATTCATCTTAATA+CGG - chr7_3:4241157-4241176 None:intergenic 20.0%
!! AATAACGTTGTTATAAAACT+GGG + chr7_3:4241740-4241759 Msa1090320:intron 20.0%
!!! ATATCTTGAAGAATTTGTTT+TGG + chr7_3:4242241-4242260 Msa1090320:intron 20.0%
!! TGGTTTACTTAATTATGATT+TGG + chr7_3:4242707-4242726 Msa1090320:intron 20.0%
!! CTTTCTTAAGTTTATTCTAA+AGG - chr7_3:4243031-4243050 None:intergenic 20.0%
!!! TAGTAATTTTTTTACTCACA+TGG + chr7_3:4243112-4243131 Msa1090320:intron 20.0%
!! GCAAAATAGAGAATAAAATT+TGG + chr7_3:4243289-4243308 Msa1090320:intron 20.0%
!!! TTTTAATGAATAGCCAATAA+TGG - chr7_3:4243897-4243916 None:intergenic 20.0%
!! TCTTATGAATTGAAAAAGTT+AGG + chr7_3:4244424-4244443 Msa1090320:intron 20.0%
!! TTTATAACATCTTAATGAAG+AGG - chr7_3:4244464-4244483 None:intergenic 20.0%
!! ACACAAATCTAAATTGATAT+AGG + chr7_3:4244994-4245013 Msa1090320:intron 20.0%
!! GAACTTTGATATTAAATGAA+AGG - chr7_3:4245092-4245111 None:intergenic 20.0%
!! TGGATATTGAAATATAGATA+GGG - chr7_3:4245551-4245570 None:intergenic 20.0%
!! ATGGATATTGAAATATAGAT+AGG - chr7_3:4245552-4245571 None:intergenic 20.0%
!! TATCTATATTTCAATATCCA+TGG + chr7_3:4245551-4245570 Msa1090320:intron 20.0%
!!! TTGATTTTGTAAAATTGCTT+TGG + chr7_3:4245737-4245756 Msa1090320:intron 20.0%
!! TTTCTTATAAGTAATTCTCT+CGG + chr7_3:4246031-4246050 Msa1090320:intron 20.0%
!!! ACCTTTTTGAAATATTCATA+GGG + chr7_3:4246480-4246499 Msa1090320:intron 20.0%
!! TTTAACCTTTAATATCAATC+AGG - chr7_3:4246507-4246526 None:intergenic 20.0%
!!! CTAATTTTGTTGTTATTTTG+GGG + chr7_3:4246631-4246650 Msa1090320:intron 20.0%
!!! GATTTTCAAAACTATTATAG+AGG + chr7_3:4247020-4247039 Msa1090320:three_prime_UTR 20.0%
!!! TAGGTTCTAAATTTGAAATT+TGG + chr7_3:4247169-4247188 Msa1090320:three_prime_UTR 20.0%
!! TTAATTCAGTGATTCATAAA+AGG - chr7_3:4248034-4248053 None:intergenic 20.0%
!! TTTGTAGAACAAATTAAGAT+GGG - chr7_3:4248331-4248350 None:intergenic 20.0%
!! TATATATTAGTTAAGATGGA+TGG + chr7_3:4248366-4248385 Msa1090320:intron 20.0%
!!! AATTTAAAAGCATGTACATA+TGG - chr7_3:4248454-4248473 None:intergenic 20.0%
!!! ACATGCTTTTAAATTTCTAT+TGG + chr7_3:4248459-4248478 Msa1090320:intron 20.0%
!!! AACCTATTTGATTTTGTATT+CGG + chr7_3:4248699-4248718 Msa1090320:intron 20.0%
!!! AAATGAGATTTTAGTCTATA+TGG + chr7_3:4248904-4248923 Msa1090320:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4248986-4249005 Msa1090320:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4248986-4249005 Msa1090320:intron 20.0%
!!! AAATGAGATTTTAGTCTATA+TGG + chr7_3:4248904-4248923 Msa1090320:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG - chr7_3:4249344-4249363 None:intergenic 20.0%
!! AATATTATGTTACGCAATAA+AGG - chr7_3:4249397-4249416 None:intergenic 20.0%
!!! AACCAATTTCGTTTTAAATT+TGG + chr7_3:4249419-4249438 Msa1090320:intron 20.0%
!!! TACCAAATTTAAAACGAAAT+TGG - chr7_3:4249424-4249443 None:intergenic 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4248986-4249005 Msa1090320:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4248986-4249005 Msa1090320:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG - chr7_3:4249344-4249363 None:intergenic 20.0%
!! AATATTATGTTACGCAATAA+AGG - chr7_3:4249397-4249416 None:intergenic 20.0%
!!! TACCAAATTTAAAACGAAAT+TGG - chr7_3:4249424-4249443 None:intergenic 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4248986-4249005 Msa1090320:intron 20.0%
!!! TTTGATAAAGGTTTGAAATT+CGG + chr7_3:4250522-4250541 Msa1090320:intron 20.0%
!!! AACCTATTTGGTTTTATATT+CGG + chr7_3:4248986-4249005 Msa1090320:intron 20.0%
!!! TATCAAACTTTTAACCATAT+AGG - chr7_3:4249344-4249363 None:intergenic 20.0%
!!! GAACCAATTTCTTTTAAATT+TGG + chr7_3:4250964-4250983 Msa1090320:intron 20.0%
!!! TACATGTTTGTTAAATATGA+AGG + chr7_3:4249500-4249519 Msa1090320:intron 20.0%
!!! AATGCTAAAATTTCATTTTC+GGG - chr7_3:4251330-4251349 None:intergenic 20.0%
!! TACAAAAATGATAAATGAGA+AGG + chr7_3:4251356-4251375 Msa1090320:intron 20.0%
!!! AGACGTTTTAAACTATTAAT+TGG + chr7_3:4251587-4251606 Msa1090320:intron 20.0%
!! ACAGTTAGAAATTTGATAAA+TGG + chr7_3:4251681-4251700 Msa1090320:intron 20.0%
!! CAGTTAGAAATTTGATAAAT+GGG + chr7_3:4251682-4251701 Msa1090320:intron 20.0%
!! AGCATAGTTAATTCTAAATT+CGG + chr7_3:4251744-4251763 Msa1090320:intron 20.0%
!! TAATTCTAAATTCGGTAAAT+TGG + chr7_3:4251752-4251771 Msa1090320:intron 20.0%
!!! TGGTTTTAAATTCAGTAAAT+TGG + chr7_3:4251870-4251889 Msa1090320:intron 20.0%
!! AAAAACAAAAATCTTGAGAT+CGG - chr7_3:4252513-4252532 None:intergenic 20.0%
!!! TCATGTTATTTATCTACTTT+GGG + chr7_3:4252617-4252636 Msa1090320:intron 20.0%
!!! TCAAAATTTTAAACGTATTC+AGG - chr7_3:4252694-4252713 None:intergenic 20.0%
!! TGATGTTCAAATTTCAAAAA+AGG - chr7_3:4252937-4252956 None:intergenic 20.0%
!! AATATTATGTTATGCATCAA+GGG - chr7_3:4253291-4253310 None:intergenic 20.0%
!! AAATATTATGTTATGCATCA+AGG - chr7_3:4253292-4253311 None:intergenic 20.0%
!! ACATAATATTTGAACCTATT+TGG + chr7_3:4253301-4253320 Msa1090320:three_prime_UTR 20.0%
!!! AACCTATTTGGTTTTAAATT+CGG + chr7_3:4253313-4253332 Msa1090320:three_prime_UTR 20.0%
!!! TTCGGTAATTATAAAGTATT+AGG + chr7_3:4253331-4253350 Msa1090320:three_prime_UTR 20.0%
!!! ATGGTTACAAGTTTTATAAA+TGG + chr7_3:4253389-4253408 Msa1090320:three_prime_UTR 20.0%
!!! TACAAGTTTTATAAATGGAA+AGG + chr7_3:4253394-4253413 Msa1090320:three_prime_UTR 20.0%
!!! AACCTATTTAGTTTTGTATT+CGG + chr7_3:4253450-4253469 Msa1090320:three_prime_UTR 20.0%
! GAAGATTCAAAATCATAGAA+TGG - chr7_3:4237689-4237708 None:intergenic 25.0%
! ATCTGAATTTGAATCTCATA+TGG + chr7_3:4237733-4237752 Msa1090320:intron 25.0%
! AAGTGTTAAATTTAGATCAG+TGG + chr7_3:4237883-4237902 Msa1090320:intron 25.0%
! TATCATAATGTTTAAGCAAC+AGG - chr7_3:4237948-4237967 None:intergenic 25.0%
! ATGTCTTCTCATAATATCAA+TGG + chr7_3:4238020-4238039 Msa1090320:intron 25.0%
!! GTAATTTTCAACACACTATT+TGG + chr7_3:4238061-4238080 Msa1090320:CDS 25.0%
!!! TTTGTTTTTGCAGGTTTAAA+TGG + chr7_3:4238113-4238132 Msa1090320:intron 25.0%
! AACACTCTATACTAAATGTT+TGG + chr7_3:4238166-4238185 Msa1090320:intron 25.0%
! TCATAACCTTCTTCATTAAT+AGG + chr7_3:4238233-4238252 Msa1090320:intron 25.0%
! AATAAGCCTATTAATGAAGA+AGG - chr7_3:4238242-4238261 None:intergenic 25.0%
! TTCAATTGAGTATCATTGAA+AGG + chr7_3:4238313-4238332 Msa1090320:intron 25.0%
! ATTACAACTTTCTAATCCAA+AGG - chr7_3:4238573-4238592 None:intergenic 25.0%
!!! TCTTTTGTAATTGGCTTTTT+AGG + chr7_3:4238720-4238739 Msa1090320:intron 25.0%
!! ACAAATTTTACCTGCTTTAA+AGG - chr7_3:4238982-4239001 None:intergenic 25.0%
! TAATGGCTCAAGTTAAAAAT+GGG - chr7_3:4239035-4239054 None:intergenic 25.0%
! TTAATGGCTCAAGTTAAAAA+TGG - chr7_3:4239036-4239055 None:intergenic 25.0%
!!! GAGCCATTAATTTTTTTGTT+TGG + chr7_3:4239046-4239065 Msa1090320:intron 25.0%
!!! AGTGAATTGATTTTGACTAA+TGG + chr7_3:4239093-4239112 Msa1090320:intron 25.0%
! TTTATTTGAATCATAGGACT+TGG + chr7_3:4239148-4239167 Msa1090320:intron 25.0%
! TTATTTGAATCATAGGACTT+GGG + chr7_3:4239149-4239168 Msa1090320:intron 25.0%
!!! TGATATTTTTTTCAGATGTG+AGG - chr7_3:4239190-4239209 None:intergenic 25.0%
!! GTAGTTTGCATAAACAATAA+AGG - chr7_3:4239389-4239408 None:intergenic 25.0%
! CAAACTACTTATAAAGACTA+AGG + chr7_3:4239401-4239420 Msa1090320:intron 25.0%
!! ATTGATAATTCCAAAAGACT+AGG + chr7_3:4239492-4239511 Msa1090320:intron 25.0%
! TGATAACTTCATTACTTCTA+AGG - chr7_3:4240239-4240258 None:intergenic 25.0%
!!! CGTATTTTGGAGTTTTTATA+TGG - chr7_3:4240312-4240331 None:intergenic 25.0%
! ATAAAAACTCCAAAATACGT+AGG + chr7_3:4240313-4240332 Msa1090320:intron 25.0%
! TGTGTAAGATATTATCTAGA+CGG - chr7_3:4240597-4240616 None:intergenic 25.0%
!! CTTACACATTTTATCAAGAT+TGG + chr7_3:4240609-4240628 Msa1090320:intron 25.0%
! ACCAAAAATACATGAATAGT+AGG - chr7_3:4240817-4240836 None:intergenic 25.0%
! TCACTTATTATACTCATTAC+CGG + chr7_3:4240992-4241011 Msa1090320:intron 25.0%
!! ATGATTCTAGTTATATAGAC+CGG - chr7_3:4241014-4241033 None:intergenic 25.0%
!!! TTGACAAGACCATTTTTTTA+AGG - chr7_3:4241245-4241264 None:intergenic 25.0%
! GAATAACGTTGTTATAAAAC+TGG + chr7_3:4241739-4241758 Msa1090320:intron 25.0%
! AAAACAATGGATCTAAAGAA+TGG - chr7_3:4241897-4241916 None:intergenic 25.0%
! AATAGGCTGTAAAAAAACAA+TGG - chr7_3:4241910-4241929 None:intergenic 25.0%
! GTCTATTATTGAATATGTTG+AGG + chr7_3:4242475-4242494 Msa1090320:intron 25.0%
! CATAATACATTATGTTAGTG+TGG - chr7_3:4242522-4242541 None:intergenic 25.0%
!!! ATTTATGGACTTCTAGAATA+TGG + chr7_3:4242687-4242706 Msa1090320:intron 25.0%
!! TTTGGTGATTTAGTGATTAT+TGG + chr7_3:4242725-4242744 Msa1090320:intron 25.0%
! TAACTCTTGGCATAAATATT+TGG - chr7_3:4243055-4243074 None:intergenic 25.0%
! AATCCAATATCAATAACTCT+TGG - chr7_3:4243068-4243087 None:intergenic 25.0%
!!! TCTTGTTTTCTCACTTTAAT+TGG + chr7_3:4243321-4243340 Msa1090320:intron 25.0%
!!! TTTAATTGGTTTTACTTTCC+AGG + chr7_3:4243335-4243354 Msa1090320:intron 25.0%
! TCTCCAAAATAAGTAAATTC+TGG - chr7_3:4243395-4243414 None:intergenic 25.0%
! TATCTTATGCATTGAAAACA+GGG - chr7_3:4243501-4243520 None:intergenic 25.0%
! TTATCTTATGCATTGAAAAC+AGG - chr7_3:4243502-4243521 None:intergenic 25.0%
! TTCAACAAAATTGATAGAGT+TGG - chr7_3:4243541-4243560 None:intergenic 25.0%
! GTATTCCATTAAGATGAAAA+CGG + chr7_3:4243626-4243645 Msa1090320:intron 25.0%
! TTCTAATCGAAATAATGGTA+AGG + chr7_3:4243731-4243750 Msa1090320:intron 25.0%
!!! TTTTTCCTCTCTAAAATAGT+TGG + chr7_3:4243861-4243880 Msa1090320:intron 25.0%
!! TGGAAAGATTTTTCCATTAT+TGG + chr7_3:4243881-4243900 Msa1090320:intron 25.0%
! TACCTTCAATAAGTATTCAA+TGG + chr7_3:4243927-4243946 Msa1090320:intron 25.0%
! TACCATTGAATACTTATTGA+AGG - chr7_3:4243932-4243951 None:intergenic 25.0%
!!! AATTCACTGTTTTAAAACTC+TGG - chr7_3:4244038-4244057 None:intergenic 25.0%
!! TTCACCAACAATAATGTTTT+TGG + chr7_3:4244111-4244130 Msa1090320:intron 25.0%
! AGAACCAAAAACATTATTGT+TGG - chr7_3:4244118-4244137 None:intergenic 25.0%
!!! ACAATAATGTTTTTGGTTCT+TGG + chr7_3:4244118-4244137 Msa1090320:intron 25.0%
!! ATTAGTCTATGAGTATGATT+GGG - chr7_3:4244307-4244326 None:intergenic 25.0%
!! AATTAGTCTATGAGTATGAT+TGG - chr7_3:4244308-4244327 None:intergenic 25.0%
! ATCATACTCATAGACTAATT+TGG + chr7_3:4244308-4244327 Msa1090320:intron 25.0%
! TATCATTTGCTTTCTTAATG+AGG + chr7_3:4244510-4244529 Msa1090320:intron 25.0%
! ATCATTTGCTTTCTTAATGA+GGG + chr7_3:4244511-4244530 Msa1090320:intron 25.0%
! AGAAATTATCATGCAAAACT+GGG - chr7_3:4244657-4244676 None:intergenic 25.0%
! AAGAAATTATCATGCAAAAC+TGG - chr7_3:4244658-4244677 None:intergenic 25.0%
!!! TCTTATTCACTTTTTTTTCC+TGG + chr7_3:4244800-4244819 Msa1090320:intron 25.0%
!! TACATTATCAGAAAAAGTGT+TGG + chr7_3:4244917-4244936 Msa1090320:intron 25.0%
! TCGTTACATAGTATTTGTTT+AGG + chr7_3:4245244-4245263 Msa1090320:intron 25.0%
! CGTTACATAGTATTTGTTTA+GGG + chr7_3:4245245-4245264 Msa1090320:intron 25.0%
! GTTACATAGTATTTGTTTAG+GGG + chr7_3:4245246-4245265 Msa1090320:intron 25.0%
!!! TGTTCTTTGGTTTATTGTTT+TGG + chr7_3:4245324-4245343 Msa1090320:intron 25.0%
! TTGGCATTATAAGGATATTT+AGG - chr7_3:4245482-4245501 None:intergenic 25.0%
! TAAATATCCTTATAATGCCA+AGG + chr7_3:4245481-4245500 Msa1090320:intron 25.0%
! GAAAATAGAGATTAATGAGT+TGG + chr7_3:4245661-4245680 Msa1090320:intron 25.0%
! ATAAGCTATTTATGGAAACA+AGG - chr7_3:4246068-4246087 None:intergenic 25.0%
! AAGTGATTGAATATATCTGT+TGG + chr7_3:4246210-4246229 Msa1090320:intron 25.0%
!!! CTAATCATTTTGACAAAATG+TGG + chr7_3:4246398-4246417 Msa1090320:intron 25.0%
!!! GACCTTTTTGAAATATTCAT+AGG + chr7_3:4246479-4246498 Msa1090320:intron 25.0%
! TCCCTATGAATATTTCAAAA+AGG - chr7_3:4246484-4246503 None:intergenic 25.0%
! CATAATTTCAACGACTAATT+TGG + chr7_3:4246577-4246596 Msa1090320:intron 25.0%
! ACAAAATTAGTAACTTTCAC+TGG - chr7_3:4246621-4246640 None:intergenic 25.0%
!!! TGTTTTTTGAGTGATATAGT+CGG + chr7_3:4246782-4246801 Msa1090320:intron 25.0%
! TTAATTTATGACATAGTGCA+TGG - chr7_3:4246907-4246926 None:intergenic 25.0%
! TTTCAAAACTATTATAGAGG+TGG + chr7_3:4247023-4247042 Msa1090320:three_prime_UTR 25.0%
!! TCATGTTTTCATGATTTCAA+GGG - chr7_3:4247419-4247438 None:intergenic 25.0%
! CGACAAGTTTAAAAATATTG+TGG + chr7_3:4247567-4247586 Msa1090320:three_prime_UTR 25.0%
! GATGAATGCAAAATATTAGA+TGG - chr7_3:4248179-4248198 None:intergenic 25.0%
! TTGTAGAACAAATTAAGATG+GGG - chr7_3:4248330-4248349 None:intergenic 25.0%
! CTTTGTAGAACAAATTAAGA+TGG - chr7_3:4248332-4248351 None:intergenic 25.0%
!! TAGAATTCTGAAGACATATA+AGG + chr7_3:4248490-4248509 Msa1090320:intron 25.0%
!! AGAATTCTGAAGACATATAA+GGG + chr7_3:4248491-4248510 Msa1090320:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr7_3:4248633-4248652 None:intergenic 25.0%
! TACCGAATACAAAATCAAAT+AGG - chr7_3:4248704-4248723 None:intergenic 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr7_3:4248716-4248735 Msa1090320:intron 25.0%
! TACCGAATATAAAACCAAAT+AGG - chr7_3:4248991-4249010 None:intergenic 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr7_3:4248716-4248735 Msa1090320:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4249042-4249061 Msa1090320:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4249059-4249078 None:intergenic 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4249133-4249152 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4249145-4249164 Msa1090320:intron 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr7_3:4249060-4249079 Msa1090320:intron 25.0%
!!! AACCTATTTGGTTTTGTATT+CGG + chr7_3:4249270-4249289 Msa1090320:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG - chr7_3:4249325-4249344 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG - chr7_3:4249041-4249060 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4249042-4249061 Msa1090320:intron 25.0%
! AAATGATATGTGAACCTATT+TGG + chr7_3:4249556-4249575 Msa1090320:intron 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG + chr7_3:4249568-4249587 Msa1090320:intron 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG + chr7_3:4249625-4249644 Msa1090320:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4249133-4249152 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4249145-4249164 Msa1090320:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4249042-4249061 Msa1090320:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4249059-4249078 None:intergenic 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4249133-4249152 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4249145-4249164 Msa1090320:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4249042-4249061 Msa1090320:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4249059-4249078 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr7_3:4249060-4249079 Msa1090320:intron 25.0%
!!! AACCTATTTGGTTTTGTATT+CGG + chr7_3:4249270-4249289 Msa1090320:intron 25.0%
!!! TAGGCTAAAATCTCATTTTT+GGG - chr7_3:4249325-4249344 None:intergenic 25.0%
!! ATAGGCTAAAATCTCATTTT+TGG - chr7_3:4249041-4249060 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4249042-4249061 Msa1090320:intron 25.0%
!!! AGCCAATTTCGTTTTAAATT+TGG + chr7_3:4250144-4250163 Msa1090320:intron 25.0%
! AAATGATATGTGAACCTATT+TGG + chr7_3:4249556-4249575 Msa1090320:intron 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG + chr7_3:4249568-4249587 Msa1090320:intron 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG + chr7_3:4249625-4249644 Msa1090320:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4249133-4249152 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4249145-4249164 Msa1090320:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4249042-4249061 Msa1090320:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4249059-4249078 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr7_3:4249060-4249079 Msa1090320:intron 25.0%
! TTCCGAATATAAAACCAAAT+AGG - chr7_3:4249133-4249152 None:intergenic 25.0%
!! ATTCGGAAAAATGAAAGTAT+TGG + chr7_3:4249145-4249164 Msa1090320:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr7_3:4249042-4249061 Msa1090320:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr7_3:4249059-4249078 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr7_3:4249060-4249079 Msa1090320:intron 25.0%
! AACATTATGTTACGCAATAA+AGG - chr7_3:4250943-4250962 None:intergenic 25.0%
!!! AACCTATTTGGTTTGAAATT+CGG + chr7_3:4249568-4249587 Msa1090320:intron 25.0%
!! AAAATTTCATTTTCCGACAA+GGG - chr7_3:4251161-4251180 None:intergenic 25.0%
!! TAAAATTTCATTTTCCGACA+AGG - chr7_3:4251162-4251181 None:intergenic 25.0%
!!! AAATGAAATTTTAGCCTATG+TGG + chr7_3:4249625-4249644 Msa1090320:intron 25.0%
!!! ATTTTTAAGCCAAGTTTGTT+TGG + chr7_3:4251417-4251436 Msa1090320:intron 25.0%
!!! ACTAGGTTCAAATCATTTTT+GGG - chr7_3:4251489-4251508 None:intergenic 25.0%
!! AACTAGGTTCAAATCATTTT+TGG - chr7_3:4251490-4251509 None:intergenic 25.0%
! TAGAAATTTGATAAATGGGA+AGG + chr7_3:4251686-4251705 Msa1090320:intron 25.0%
!! ACTTGATATTTAAGACTAGT+TGG + chr7_3:4251850-4251869 Msa1090320:intron 25.0%
! AAAAGAGTAAAGATGCAAAT+GGG - chr7_3:4252070-4252089 None:intergenic 25.0%
! AAAAAGAGTAAAGATGCAAA+TGG - chr7_3:4252071-4252090 None:intergenic 25.0%
!! GCAGATAAAGTTTTCTTAAT+CGG - chr7_3:4252160-4252179 None:intergenic 25.0%
! CCAATTTATTGATCTCTTTA+CGG + chr7_3:4252270-4252289 Msa1090320:intron 25.0%
! ATCATACAAAAGCAAATTCA+AGG + chr7_3:4252431-4252450 Msa1090320:three_prime_UTR 25.0%
!! TAATTTTCTGCCATTGAATA+AGG + chr7_3:4252462-4252481 Msa1090320:three_prime_UTR 25.0%
!! GTCATGTTATTTATCTACTT+TGG + chr7_3:4252616-4252635 Msa1090320:intron 25.0%
! TATGAAATTGCTCAAAGTTA+GGG - chr7_3:4252668-4252687 None:intergenic 25.0%
! ATATGAAATTGCTCAAAGTT+AGG - chr7_3:4252669-4252688 None:intergenic 25.0%
! TCTAACATACTTATATTAGC+AGG - chr7_3:4252736-4252755 None:intergenic 25.0%
! TAGTAAGGTTGTGTAAAAAA+TGG + chr7_3:4252980-4252999 Msa1090320:three_prime_UTR 25.0%
! AGTAAGGTTGTGTAAAAAAT+GGG + chr7_3:4252981-4253000 Msa1090320:three_prime_UTR 25.0%
! ATACAAAGCTTCTTTATTGA+CGG + chr7_3:4253096-4253115 Msa1090320:three_prime_UTR 25.0%
!! AAGCTAAAATCTCATTTTCT+CGG - chr7_3:4253216-4253235 None:intergenic 25.0%
!!! AATGAGATTTTAGCTTATCT+CGG + chr7_3:4253220-4253239 Msa1090320:three_prime_UTR 25.0%
!! TACCGAATTTAAAACCAAAT+AGG - chr7_3:4253318-4253337 None:intergenic 25.0%
!!! AAATGCGATTTTAGCTTATA+TGG + chr7_3:4253370-4253389 Msa1090320:three_prime_UTR 25.0%
!!! CACATCATGTTTTAAATCAA+GGG - chr7_3:4253430-4253449 None:intergenic 25.0%
!!! TCACATCATGTTTTAAATCA+AGG - chr7_3:4253431-4253450 None:intergenic 25.0%
! AACCGAATACAAAACTAAAT+AGG - chr7_3:4253455-4253474 None:intergenic 25.0%
!! TCGATTCTCAATTTGTTGTT+GGG - chr7_3:4237405-4237424 None:intergenic 30.0%
!! ATCGATTCTCAATTTGTTGT+TGG - chr7_3:4237406-4237425 None:intergenic 30.0%
! CTTTTGGTAGAATTGAGTTT+GGG + chr7_3:4237448-4237467 Msa1090320:intron 30.0%
TTGACCTTGAATTGTTTGTA+CGG - chr7_3:4237525-4237544 None:intergenic 30.0%
! TTGTTGGGTATGTTTTTCTT+AGG + chr7_3:4237806-4237825 Msa1090320:intron 30.0%
!!! TAATTGTGTTTTTGGACTGT+TGG + chr7_3:4237836-4237855 Msa1090320:intron 30.0%
AAACAACGAGCAAAAGTTTA+AGG - chr7_3:4238387-4238406 None:intergenic 30.0%
TTACTAGAAACCAAAACACA+AGG - chr7_3:4238475-4238494 None:intergenic 30.0%
TGAAATATGATCATTGCCTT+TGG + chr7_3:4238554-4238573 Msa1090320:intron 30.0%
TTTCTCGTCTGAAGAATTTA+TGG - chr7_3:4238908-4238927 None:intergenic 30.0%
AAATATCACCTGCATATTAG+AGG + chr7_3:4239202-4239221 Msa1090320:intron 30.0%
CACTCAACATGAATCATTAT+AGG + chr7_3:4239293-4239312 Msa1090320:intron 30.0%
! TCAAACTTCTCATTGGTTAT+TGG - chr7_3:4239320-4239339 None:intergenic 30.0%
TTATACACAATTTACCAGAC+AGG + chr7_3:4239433-4239452 Msa1090320:intron 30.0%
TATACACAATTTACCAGACA+GGG + chr7_3:4239434-4239453 Msa1090320:intron 30.0%
!! TATCTTATCACCTAGTCTTT+TGG - chr7_3:4239505-4239524 None:intergenic 30.0%
TTGCTCCTTCAATACAAAAT+AGG + chr7_3:4239697-4239716 Msa1090320:intron 30.0%
! TCTGATATTGAGTTCTGATT+GGG - chr7_3:4239918-4239937 None:intergenic 30.0%
! TTCTGATATTGAGTTCTGAT+TGG - chr7_3:4239919-4239938 None:intergenic 30.0%
AGAACTCAATATCAGAATCT+CGG + chr7_3:4239922-4239941 Msa1090320:intron 30.0%
AAAGTTATCCAGAACAGATT+GGG - chr7_3:4239989-4240008 None:intergenic 30.0%
AAAAGTTATCCAGAACAGAT+TGG - chr7_3:4239990-4240009 None:intergenic 30.0%
! TAACTTCATTACTTCTAAGG+TGG - chr7_3:4240236-4240255 None:intergenic 30.0%
!! TAATCTAGTCTTACCAAAAG+AGG - chr7_3:4240269-4240288 None:intergenic 30.0%
!! ACTTATTAGCCTACGTATTT+TGG - chr7_3:4240325-4240344 None:intergenic 30.0%
!!! ATCAAGATTGGGTGTTTTTT+TGG + chr7_3:4240621-4240640 Msa1090320:intron 30.0%
! GCCTACTATTCATGTATTTT+TGG + chr7_3:4240813-4240832 Msa1090320:intron 30.0%
! TTTTATGTTGACATACTGCT+AGG - chr7_3:4240931-4240950 None:intergenic 30.0%
TGATATAAAAGCAGATGGAA+AGG - chr7_3:4241488-4241507 None:intergenic 30.0%
CAACTTGATATAAAAGCAGA+TGG - chr7_3:4241493-4241512 None:intergenic 30.0%
TTTCAAAATGAGATCTACGA+TGG - chr7_3:4241582-4241601 None:intergenic 30.0%
!!! ATCACAATCGGAATTTTTTC+TGG + chr7_3:4241658-4241677 Msa1090320:intron 30.0%
ATAACAACGTTATTCTGTCA+CGG - chr7_3:4241734-4241753 None:intergenic 30.0%
! GAACGATGTAGACTAATTTT+TGG + chr7_3:4241767-4241786 Msa1090320:intron 30.0%
AAAATAGAGGAAGAGAGAAT+AGG - chr7_3:4241927-4241946 None:intergenic 30.0%
!!! TCTTTCTGTATCTTTTTTCG+CGG + chr7_3:4242313-4242332 Msa1090320:intron 30.0%
!! CTATGAAACTTGTTGTTGAA+TGG + chr7_3:4242619-4242638 Msa1090320:three_prime_UTR 30.0%
!! CTATTTCTAACTGATTCGAA+TGG + chr7_3:4242662-4242681 Msa1090320:three_prime_UTR 30.0%
! CTGATTCGAATGGTAATTTA+TGG + chr7_3:4242672-4242691 Msa1090320:intron 30.0%
AAGATATTAGCATGCAAAGT+TGG - chr7_3:4242768-4242787 None:intergenic 30.0%
AACTTTGCATGCTAATATCT+TGG + chr7_3:4242767-4242786 Msa1090320:intron 30.0%
ACTTTGCATGCTAATATCTT+GGG + chr7_3:4242768-4242787 Msa1090320:intron 30.0%
GATGAAGAAATGAAGTAAGA+AGG - chr7_3:4242952-4242971 None:intergenic 30.0%
! TTCTAAAGGTTAGTGAAGAA+TGG - chr7_3:4243017-4243036 None:intergenic 30.0%
ATGCCAAGAGTTATTGATAT+TGG + chr7_3:4243062-4243081 Msa1090320:intron 30.0%
TAAACTGAATTATTGTGTGC+AGG + chr7_3:4243170-4243189 Msa1090320:intron 30.0%
AAGATGCTAATTAGCTACTA+AGG - chr7_3:4243223-4243242 None:intergenic 30.0%
TTGAATCAGATAACAAACCT+TGG + chr7_3:4243255-4243274 Msa1090320:three_prime_UTR 30.0%
! TTTTGCAATATTCCTTACCA+AGG - chr7_3:4243275-4243294 None:intergenic 30.0%
CCAAAATAAGTAAATTCTGG+AGG - chr7_3:4243392-4243411 None:intergenic 30.0%
! CCTCCAGAATTTACTTATTT+TGG + chr7_3:4243389-4243408 Msa1090320:three_prime_UTR 30.0%
GATTACCACTTACAAAATCA+AGG + chr7_3:4243413-4243432 Msa1090320:three_prime_UTR 30.0%
TGTTGAACTATATAACACGT+TGG + chr7_3:4243554-4243573 Msa1090320:intron 30.0%
! GTAAGGTGATACTCTAATTT+TGG + chr7_3:4243748-4243767 Msa1090320:intron 30.0%
!! TCTAATTTTGGTCTGAATGA+AGG + chr7_3:4243760-4243779 Msa1090320:intron 30.0%
!! TCTTTCCAACTATTTTAGAG+AGG - chr7_3:4243869-4243888 None:intergenic 30.0%
! TTGTGCATTTTCAGAAACAA+TGG + chr7_3:4244056-4244075 Msa1090320:intron 30.0%
!! TTCTTGGTTCTAAACTACTT+GGG + chr7_3:4244134-4244153 Msa1090320:intron 30.0%
AATTTGCCTCTAATTTCTGT+TGG + chr7_3:4244168-4244187 Msa1090320:intron 30.0%
ATTTGCCTCTAATTTCTGTT+GGG + chr7_3:4244169-4244188 Msa1090320:intron 30.0%
AAATTCCCAACAGAAATTAG+AGG - chr7_3:4244177-4244196 None:intergenic 30.0%
GAAATTATCATGCAAAACTG+GGG - chr7_3:4244656-4244675 None:intergenic 30.0%
TCTATTATCAATAGGGTCAA+TGG - chr7_3:4244868-4244887 None:intergenic 30.0%
! ATTTAAACGCAGCTTTGTAA+TGG + chr7_3:4244888-4244907 Msa1090320:intron 30.0%
! TTTAAACGCAGCTTTGTAAT+GGG + chr7_3:4244889-4244908 Msa1090320:intron 30.0%
! AGAGGCAATTGATTTATTTC+AGG - chr7_3:4245057-4245076 None:intergenic 30.0%
GAAATAAATCAATTGCCTCT+TGG + chr7_3:4245057-4245076 Msa1090320:intron 30.0%
! ACGCTTTTCATTTACTTAGA+CGG + chr7_3:4245129-4245148 Msa1090320:intron 30.0%
GGGCTGATTAAAGAATAATT+TGG + chr7_3:4245170-4245189 Msa1090320:intron 30.0%
AATGAGTTATGTAAAATGCG+AGG + chr7_3:4245194-4245213 Msa1090320:intron 30.0%
TATTTGTTTAGGGGATATGT+GGG + chr7_3:4245255-4245274 Msa1090320:intron 30.0%
!!! CTTTGGTTTATTGTTTTGGA+AGG + chr7_3:4245328-4245347 Msa1090320:intron 30.0%
!!! GTTTATTGTTTTGGAAGGAT+AGG + chr7_3:4245333-4245352 Msa1090320:intron 30.0%
CAATATTGGGAAGATTTGTA+GGG + chr7_3:4245413-4245432 Msa1090320:intron 30.0%
! CAAAAGCTTTTAATCACTTC+TGG + chr7_3:4245821-4245840 Msa1090320:intron 30.0%
! AAAGTGTGTATTTTCTGTCA+CGG - chr7_3:4245945-4245964 None:intergenic 30.0%
ACAGAAAATACACACTTTGT+TGG + chr7_3:4245947-4245966 Msa1090320:intron 30.0%
AGCAGCAAATAAGCTATTTA+TGG - chr7_3:4246076-4246095 None:intergenic 30.0%
CATCTCTATGTCGATATTAA+AGG - chr7_3:4246282-4246301 None:intergenic 30.0%
GATTATGAATAAACGAACGA+AGG - chr7_3:4246326-4246345 None:intergenic 30.0%
!! TACCTCTAAAACAATGAAGT+TGG - chr7_3:4246538-4246557 None:intergenic 30.0%
!!! AACTTCATTGTTTTAGAGGT+AGG + chr7_3:4246537-4246556 Msa1090320:intron 30.0%
!!! ACTTCATTGTTTTAGAGGTA+GGG + chr7_3:4246538-4246557 Msa1090320:intron 30.0%
AATTTCAACGACTAATTTGG+TGG + chr7_3:4246580-4246599 Msa1090320:intron 30.0%
TCATATGAGAAAAATTCCTC+AGG - chr7_3:4246662-4246681 None:intergenic 30.0%
! TGAGGAATTTTTCTCATATG+AGG + chr7_3:4246661-4246680 Msa1090320:intron 30.0%
TGTTAAGTGAAAGACATGAT+TGG + chr7_3:4246946-4246965 Msa1090320:intron 30.0%
TTGAATGCTTAATTGCAGAA+AGG + chr7_3:4246996-4247015 Msa1090320:intron 30.0%
AAAACTATTATAGAGGTGGT+TGG + chr7_3:4247027-4247046 Msa1090320:three_prime_UTR 30.0%
AATTGCCTATCATCATTCAA+CGG - chr7_3:4247063-4247082 None:intergenic 30.0%
! ACATTTTCCTTGTAGTTCAA+TGG - chr7_3:4247105-4247124 None:intergenic 30.0%
TTGAAATTTGGAGATTATGC+TGG + chr7_3:4247181-4247200 Msa1090320:three_prime_UTR 30.0%
ATGAGATAAATACATGACGA+TGG + chr7_3:4247376-4247395 Msa1090320:three_prime_UTR 30.0%
AAATACATGACGATGGATAA+TGG + chr7_3:4247383-4247402 Msa1090320:three_prime_UTR 30.0%
AATACATGACGATGGATAAT+GGG + chr7_3:4247384-4247403 Msa1090320:three_prime_UTR 30.0%
! CTCATGTTTTCATGATTTCA+AGG - chr7_3:4247420-4247439 None:intergenic 30.0%
CTTGAAATCATGAAAACATG+AGG + chr7_3:4247418-4247437 Msa1090320:three_prime_UTR 30.0%
AAAGAATAATCAGCCACAAT+TGG + chr7_3:4247591-4247610 Msa1090320:three_prime_UTR 30.0%
! CAGAATTCACAACTTTTGTT+TGG - chr7_3:4247675-4247694 None:intergenic 30.0%
TATGTAGATCATGTTCAGTT+AGG - chr7_3:4247774-4247793 None:intergenic 30.0%
! GTATTATTTGAAACTTCCCA+GGG - chr7_3:4247970-4247989 None:intergenic 30.0%
! AGTATTATTTGAAACTTCCC+AGG - chr7_3:4247971-4247990 None:intergenic 30.0%
TTAAGATGGATGGTAAGTTA+TGG + chr7_3:4248376-4248395 Msa1090320:intron 30.0%
GAAGACATATAAGGGTAATA+TGG + chr7_3:4248499-4248518 Msa1090320:intron 30.0%
!! AAATCTCATTTTCGAGACAA+GGG - chr7_3:4248747-4248766 None:intergenic 30.0%
!! AAAATCTCATTTTCGAGACA+AGG - chr7_3:4248748-4248767 None:intergenic 30.0%
! TTGTCTCGAAAATGAGATTT+TGG + chr7_3:4248747-4248766 Msa1090320:intron 30.0%
!! AAATGAGATTTTGGCCTATA+AGG + chr7_3:4248756-4248775 Msa1090320:intron 30.0%
!! TATCAAACTTGTAGCCTTAT+AGG - chr7_3:4248773-4248792 None:intergenic 30.0%
! AGGCTACAAGTTTGATAATT+AGG + chr7_3:4248776-4248795 Msa1090320:intron 30.0%
CATATCATGTTTCGCATTAA+GGG - chr7_3:4248826-4248845 None:intergenic 30.0%
ACATATCATGTTTCGCATTA+AGG - chr7_3:4248827-4248846 None:intergenic 30.0%
!!! ACCCTATTTGGTTTTGTATT+CGG + chr7_3:4248848-4248867 Msa1090320:intron 30.0%
ACCGAATACAAAACCAAATA+GGG - chr7_3:4248852-4248871 None:intergenic 30.0%
TACCGAATACAAAACCAAAT+AGG - chr7_3:4248853-4248872 None:intergenic 30.0%
ATGGCTATAAGTTTGATGAA+TGG + chr7_3:4248923-4248942 Msa1090320:intron 30.0%
TGGCTATAAGTTTGATGAAT+GGG + chr7_3:4248924-4248943 Msa1090320:intron 30.0%
CATATCATGTTTCTCATCAA+GGG - chr7_3:4248964-4248983 None:intergenic 30.0%
ACATATCATGTTTCTCATCA+AGG - chr7_3:4248965-4248984 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4248687-4248706 Msa1090320:intron 30.0%
! ACATGATTTGTGAACCTATT+TGG + chr7_3:4249116-4249135 Msa1090320:intron 30.0%
CATATCATGTTTCGTATCAA+GGG - chr7_3:4249248-4249267 None:intergenic 30.0%
ACATATCATGTTTCGTATCA+AGG - chr7_3:4249249-4249268 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4248687-4248706 Msa1090320:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+TGG - chr7_3:4249318-4249337 None:intergenic 30.0%
!! CATATCATTTTTCGCATCAA+GGG - chr7_3:4249546-4249565 None:intergenic 30.0%
!! ACATATCATTTTTCGCATCA+AGG - chr7_3:4249547-4249566 None:intergenic 30.0%
TACCGAATTTCAAACCAAAT+AGG - chr7_3:4249573-4249592 None:intergenic 30.0%
! AAATTTCATTTTCGCGACAA+GGG - chr7_3:4249616-4249635 None:intergenic 30.0%
! AAAATTTCATTTTCGCGACA+AGG - chr7_3:4249617-4249636 None:intergenic 30.0%
TATCAAACTTCTAACCACAT+AGG - chr7_3:4249642-4249661 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4248687-4248706 Msa1090320:intron 30.0%
! ACATGATTTGTGAACCTATT+TGG + chr7_3:4249116-4249135 Msa1090320:intron 30.0%
CATATCATGTTTCGTATCAA+GGG - chr7_3:4249248-4249267 None:intergenic 30.0%
ACATATCATGTTTCGTATCA+AGG - chr7_3:4249249-4249268 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4248687-4248706 Msa1090320:intron 30.0%
!!! AAATCTCATTTTTGGGACAA+TGG - chr7_3:4249318-4249337 None:intergenic 30.0%
!! CATATCATTTTTCGCATCAA+GGG - chr7_3:4249546-4249565 None:intergenic 30.0%
!! ACATATCATTTTTCGCATCA+AGG - chr7_3:4249547-4249566 None:intergenic 30.0%
TACCGAATTTCAAACCAAAT+AGG - chr7_3:4249573-4249592 None:intergenic 30.0%
! AAATTTCATTTTCGCGACAA+GGG - chr7_3:4249616-4249635 None:intergenic 30.0%
! AAAATTTCATTTTCGCGACA+AGG - chr7_3:4249617-4249636 None:intergenic 30.0%
TATCAAACTTCTAACCACAT+AGG - chr7_3:4249642-4249661 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4248687-4248706 Msa1090320:intron 30.0%
! ACATTTCATTTTCGCAACAA+GGG - chr7_3:4250570-4250589 None:intergenic 30.0%
! AACATTTCATTTTCGCAACA+AGG - chr7_3:4250571-4250590 None:intergenic 30.0%
! AAATGAAATGTTAGCCTATG+TGG + chr7_3:4250579-4250598 Msa1090320:intron 30.0%
TATCAAACTTCTAACCACAT+AGG - chr7_3:4249642-4249661 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4248687-4248706 Msa1090320:intron 30.0%
ATATGTGAACCTATTTGGTT+TGG + chr7_3:4248979-4248998 Msa1090320:intron 30.0%
!! AACCTATTTGGTTTGGTATT+CGG + chr7_3:4250807-4250826 Msa1090320:intron 30.0%
ACATGATATGTGAACCTATT+TGG + chr7_3:4248687-4248706 Msa1090320:intron 30.0%
TACCGAATTTCAAACCAAAT+AGG - chr7_3:4249573-4249592 None:intergenic 30.0%
TGGTTGCAAGTTTGATAAAT+GGG + chr7_3:4251189-4251208 Msa1090320:intron 30.0%
AAAATCATGTTTCGCATCAA+GGG - chr7_3:4251402-4251421 None:intergenic 30.0%
AAAAATCATGTTTCGCATCA+AGG - chr7_3:4251403-4251422 None:intergenic 30.0%
!!! TTCAAATCATTTTTGGGTTG+AGG - chr7_3:4251483-4251502 None:intergenic 30.0%
! CAATGATTGCTGAAGTTTTT+AGG + chr7_3:4252028-4252047 Msa1090320:three_prime_UTR 30.0%
CCGTAAAGAGATCAATAAAT+TGG - chr7_3:4252273-4252292 None:intergenic 30.0%
TTCCTATTTAGTTACACTCA+CGG + chr7_3:4252356-4252375 Msa1090320:three_prime_UTR 30.0%
! TTTTGTATGATGATTGCACT+CGG - chr7_3:4252422-4252441 None:intergenic 30.0%
TAGCATCAAACCTTATTCAA+TGG - chr7_3:4252475-4252494 None:intergenic 30.0%
ATACTTATATTAGCAGGACA+TGG - chr7_3:4252730-4252749 None:intergenic 30.0%
TGTTGAATAATCATCTTTCC+AGG + chr7_3:4252780-4252799 Msa1090320:intron 30.0%
! ATGTGCTTTTCTTTCAACTA+AGG + chr7_3:4252834-4252853 Msa1090320:three_prime_UTR 30.0%
AAGAGAGTCACTAAAATTCA+AGG - chr7_3:4252885-4252904 None:intergenic 30.0%
GTTGGATTCAGATGATAAAT+AGG - chr7_3:4253043-4253062 None:intergenic 30.0%
! TTCAATATGCAGTCTTATCA+AGG + chr7_3:4253127-4253146 Msa1090320:three_prime_UTR 30.0%
!!! ATGAGATTTTAGCTTATCTC+GGG + chr7_3:4253221-4253240 Msa1090320:three_prime_UTR 30.0%
GGGTTACATGTTTGATAAAT+TGG + chr7_3:4253241-4253260 Msa1090320:three_prime_UTR 30.0%
GATAAATTGGAAGTTTGAAC+TGG + chr7_3:4253254-4253273 Msa1090320:three_prime_UTR 30.0%
! GCTTTTGGTAGAATTGAGTT+TGG + chr7_3:4237447-4237466 Msa1090320:intron 35.0%
TTCACCGTACAAACAATTCA+AGG + chr7_3:4237518-4237537 Msa1090320:intron 35.0%
AAGGCTAATTTGACAGCAAA+AGG - chr7_3:4237921-4237940 None:intergenic 35.0%
TGTTTAAGCAACAGGATCAA+AGG - chr7_3:4237940-4237959 None:intergenic 35.0%
GAAGTGAAATTGAACTCTGA+TGG + chr7_3:4238766-4238785 Msa1090320:CDS 35.0%
TCAATTTCTTAATGGCAGCA+AGG - chr7_3:4238792-4238811 None:intergenic 35.0%
ATTATCAAGCATGTCAACAG+TGG - chr7_3:4238875-4238894 None:intergenic 35.0%
GTTAAAAATGGGCATTTCAG+CGG - chr7_3:4239024-4239043 None:intergenic 35.0%
AAGCATGTCAAACTTCTCAT+TGG - chr7_3:4239327-4239346 None:intergenic 35.0%
AGACTTGAAGGGATCAAATT+GGG + chr7_3:4239361-4239380 Msa1090320:intron 35.0%
CATGCTTGGTTAAGATTTCA+GGG + chr7_3:4239619-4239638 Msa1090320:intron 35.0%
TCCTATGCACTTTCAATGAA+AGG + chr7_3:4239667-4239686 Msa1090320:intron 35.0%
! TCCTTTCATTGAAAGTGCAT+AGG - chr7_3:4239671-4239690 None:intergenic 35.0%
! GCATGCCTATTTTGTATTGA+AGG - chr7_3:4239705-4239724 None:intergenic 35.0%
! TCAAAGCTAGGTTAGGTTTT+GGG - chr7_3:4239828-4239847 None:intergenic 35.0%
! TTCAAAGCTAGGTTAGGTTT+TGG - chr7_3:4239829-4239848 None:intergenic 35.0%
TCAATATCAGAATCTCGGAA+TGG + chr7_3:4239927-4239946 Msa1090320:intron 35.0%
TGACTCAATCTGAACTCAAA+CGG + chr7_3:4239957-4239976 Msa1090320:intron 35.0%
! TTATCAAACTCAGCCTCTTT+TGG + chr7_3:4240253-4240272 Msa1090320:intron 35.0%
TTAACCTCATCTTACATGCT+TGG - chr7_3:4240381-4240400 None:intergenic 35.0%
!!! GGTGTTTTTTTGGCGTTTTA+TGG + chr7_3:4240631-4240650 Msa1090320:intron 35.0%
! TTGGCGTTTTATGGTGTTTT+TGG + chr7_3:4240640-4240659 Msa1090320:intron 35.0%
! TGGCGTTTTATGGTGTTTTT+GGG + chr7_3:4240641-4240660 Msa1090320:intron 35.0%
TGCCTAAAAACACCAAAACT+GGG - chr7_3:4240715-4240734 None:intergenic 35.0%
! GTTTTATAGAGGAGATGAAG+GGG - chr7_3:4241626-4241645 None:intergenic 35.0%
!! GGTTTTATAGAGGAGATGAA+GGG - chr7_3:4241627-4241646 None:intergenic 35.0%
!! TTTCTCTGAGGGTTTTATAG+AGG - chr7_3:4241637-4241656 None:intergenic 35.0%
! CGATTGTGATTTTTCTCTGA+GGG - chr7_3:4241648-4241667 None:intergenic 35.0%
CCTCAGAGAAAAATCACAAT+CGG + chr7_3:4241646-4241665 Msa1090320:intron 35.0%
AAAGTGAGCTTACATGATGA+AGG - chr7_3:4242030-4242049 None:intergenic 35.0%
! GATTTTGGATCTCAGCTTAA+TGG + chr7_3:4242150-4242169 Msa1090320:intron 35.0%
GACATCCTTATGACTTTCAA+AGG + chr7_3:4242568-4242587 Msa1090320:three_prime_UTR 35.0%
! TGATGCCTTTGAAAGTCATA+AGG - chr7_3:4242576-4242595 None:intergenic 35.0%
TCATAGACCATTGTAGTTTC+AGG - chr7_3:4242605-4242624 None:intergenic 35.0%
AGAAACCTACACGAATCTAT+TGG - chr7_3:4242900-4242919 None:intergenic 35.0%
! GAATCTCAAAAGGGTGTAAT+AGG + chr7_3:4243192-4243211 Msa1090320:three_prime_UTR 35.0%
TCAGATAACAAACCTTGGTA+AGG + chr7_3:4243260-4243279 Msa1090320:intron 35.0%
! GCTTACCTTGATTTTGTAAG+TGG - chr7_3:4243421-4243440 None:intergenic 35.0%
AGGGTAAACATATGGTATGT+TGG - chr7_3:4243452-4243471 None:intergenic 35.0%
CATAAGATAATGCGACAAAG+AGG + chr7_3:4243512-4243531 Msa1090320:intron 35.0%
! CACTTCCGTTTTCATCTTAA+TGG - chr7_3:4243634-4243653 None:intergenic 35.0%
! GCATTTTCAGAAACAATGGA+AGG + chr7_3:4244060-4244079 Msa1090320:intron 35.0%
!! GTTCTTGGTTCTAAACTACT+TGG + chr7_3:4244133-4244152 Msa1090320:intron 35.0%
!! TCTTGGTTCTAAACTACTTG+GGG + chr7_3:4244135-4244154 Msa1090320:intron 35.0%
TTCTAAACTACTTGGGGTAA+GGG + chr7_3:4244141-4244160 Msa1090320:intron 35.0%
!!! GTTGGGAATTTTTCAAGCAA+AGG + chr7_3:4244186-4244205 Msa1090320:intron 35.0%
TGGTAGTTTAGCCTCTTAAA+AGG + chr7_3:4244328-4244347 Msa1090320:intron 35.0%
! CTGTAAGCATTCCTTTTAAG+AGG - chr7_3:4244342-4244361 None:intergenic 35.0%
AACACTGGTGCTTTCATATA+TGG - chr7_3:4244742-4244761 None:intergenic 35.0%
TGTAATCTTTATCTTACGCC+AGG - chr7_3:4244821-4244840 None:intergenic 35.0%
CCATGGATATTAAGAGTTCA+AGG - chr7_3:4244959-4244978 None:intergenic 35.0%
CCTTGAACTCTTAATATCCA+TGG + chr7_3:4244956-4244975 Msa1090320:intron 35.0%
! GCAATTGATTTATTTCAGGC+TGG - chr7_3:4245053-4245072 None:intergenic 35.0%
! CGCTTTTCATTTACTTAGAC+GGG + chr7_3:4245111-4245130 Msa1090320:intron 35.0%
TCATCCACAATGAGCAAATA+TGG + chr7_3:4245220-4245239 Msa1090320:intron 35.0%
GTATTTGTTTAGGGGATATG+TGG + chr7_3:4245254-4245273 Msa1090320:intron 35.0%
ATTTGTTTAGGGGATATGTG+GGG + chr7_3:4245256-4245275 Msa1090320:intron 35.0%
ACAAATCTTCCCAATATTGG+AGG - chr7_3:4245412-4245431 None:intergenic 35.0%
CCTACAAATCTTCCCAATAT+TGG - chr7_3:4245415-4245434 None:intergenic 35.0%
CCAATATTGGGAAGATTTGT+AGG + chr7_3:4245412-4245431 Msa1090320:intron 35.0%
CATTTCTCCTTGGCATTATA+AGG - chr7_3:4245491-4245510 None:intergenic 35.0%
!! AATCAATGCTTGATTTGTGC+AGG + chr7_3:4245601-4245620 Msa1090320:intron 35.0%
!! ATCAATGCTTGATTTGTGCA+GGG + chr7_3:4245602-4245621 Msa1090320:intron 35.0%
!! TTGATTTGTGCAGGGTAAAT+GGG + chr7_3:4245610-4245629 Msa1090320:intron 35.0%
GGTCTGTATTGAATTTGAAC+TGG + chr7_3:4245758-4245777 Msa1090320:intron 35.0%
TTCCATATTAGTGTCATGTC+CGG - chr7_3:4246172-4246191 None:intergenic 35.0%
!! TATATCTGTTGGTGTCATGT+CGG + chr7_3:4246221-4246240 Msa1090320:intron 35.0%
CTATGTCGATATTAAAGGTG+TGG - chr7_3:4246277-4246296 None:intergenic 35.0%
AATATCGACATAGAGATGCA+TGG + chr7_3:4246284-4246303 Msa1090320:intron 35.0%
AACGAAGGATAGATCTTCAA+GGG - chr7_3:4246311-4246330 None:intergenic 35.0%
! TTTATAGGGCGCTTTCAATT+AGG - chr7_3:4246356-4246375 None:intergenic 35.0%
!! TTGAAAGCGCCCTATAAATT+TGG + chr7_3:4246358-4246377 Msa1090320:intron 35.0%
!! TGAAAGCGCCCTATAAATTT+GGG + chr7_3:4246359-4246378 Msa1090320:intron 35.0%
!! TGTGGTCAGTTGATAGTAAA+TGG + chr7_3:4246416-4246435 Msa1090320:intron 35.0%
AGGGACCTGATTGATATTAA+AGG + chr7_3:4246499-4246518 Msa1090320:intron 35.0%
!!! GACCAACTTCATTGTTTTAG+AGG + chr7_3:4246533-4246552 Msa1090320:intron 35.0%
ATGAGAAAAATTCCTCAGGT+TGG - chr7_3:4246658-4246677 None:intergenic 35.0%
! TGATATAGTCGGTTTCTGAA+TGG + chr7_3:4246793-4246812 Msa1090320:intron 35.0%
TAGTGCATGGATAGATATTG+CGG - chr7_3:4246894-4246913 None:intergenic 35.0%
TAATGCCGTTGAATGATGAT+AGG + chr7_3:4247055-4247074 Msa1090320:three_prime_UTR 35.0%
! TCAAATTTAGAACCTACAGC+TGG - chr7_3:4247165-4247184 None:intergenic 35.0%
ACATTCTTCTGCTTGAAACT+AGG - chr7_3:4247244-4247263 None:intergenic 35.0%
TTTCAAGCAGAAGAATGTTC+TGG + chr7_3:4247246-4247265 Msa1090320:three_prime_UTR 35.0%
AAAGTTCTACAAGGCAACTT+GGG + chr7_3:4247272-4247291 Msa1090320:three_prime_UTR 35.0%
CGTCATGTATTTATCTCATG+TGG - chr7_3:4247375-4247394 None:intergenic 35.0%
ATACATGACGATGGATAATG+GGG + chr7_3:4247385-4247404 Msa1090320:three_prime_UTR 35.0%
AACTGAACTTGACTTTGCAT+TGG - chr7_3:4247444-4247463 None:intergenic 35.0%
TTAAATCTAGTCCAAAGACC+TGG + chr7_3:4247462-4247481 Msa1090320:three_prime_UTR 35.0%
!!! GTTGTTTTAATCCAGGTCTT+TGG - chr7_3:4247476-4247495 None:intergenic 35.0%
CTGGATTAAAACAACCATCA+GGG + chr7_3:4247481-4247500 Msa1090320:three_prime_UTR 35.0%
CAAAACTAGATCCTTCAACA+GGG - chr7_3:4247536-4247555 None:intergenic 35.0%
TCAAAACTAGATCCTTCAAC+AGG - chr7_3:4247537-4247556 None:intergenic 35.0%
TAGTCATATTAGAACCAGCA+GGG - chr7_3:4247648-4247667 None:intergenic 35.0%
TTAGTCATATTAGAACCAGC+AGG - chr7_3:4247649-4247668 None:intergenic 35.0%
TGAAGTTGAACCTCAAGTAT+CGG + chr7_3:4247795-4247814 Msa1090320:three_prime_UTR 35.0%
TGCAGAGATAAGTTGTCAAT+CGG + chr7_3:4247870-4247889 Msa1090320:three_prime_UTR 35.0%
CAGAAAATGAGAAAAACCTG+AGG - chr7_3:4247943-4247962 None:intergenic 35.0%
CAACCACTTCTGTTTATATC+CGG + chr7_3:4248231-4248250 Msa1090320:intron 35.0%
TTTCCGGATATAAACAGAAG+TGG - chr7_3:4248237-4248256 None:intergenic 35.0%
!! ATTCTTTGGAGTCACATTTC+CGG - chr7_3:4248253-4248272 None:intergenic 35.0%
!!! TCATTACCCTGAACCTTTTT+TGG + chr7_3:4248299-4248318 Msa1090320:intron 35.0%
!!! TGGTAAGTTATGGTTTTAGC+AGG + chr7_3:4248386-4248405 Msa1090320:intron 35.0%
GGTTCACATATCATGTTTCA+TGG - chr7_3:4248683-4248702 None:intergenic 35.0%
ACATGATATGTGACCCTATT+TGG + chr7_3:4248836-4248855 Msa1090320:intron 35.0%
! AAAATCTCATTTTCGCGACA+AGG - chr7_3:4248896-4248915 None:intergenic 35.0%
CAAATCATGTTTCGCATCAA+GGG - chr7_3:4249106-4249125 None:intergenic 35.0%
ACAAATCATGTTTCGCATCA+AGG - chr7_3:4249107-4249126 None:intergenic 35.0%
TGCCGAATACAAAACCAAAT+AGG - chr7_3:4249275-4249294 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG - chr7_3:4249468-4249487 None:intergenic 35.0%
CAAATCATGTTTCGCATCAA+GGG - chr7_3:4249106-4249125 None:intergenic 35.0%
ACAAATCATGTTTCGCATCA+AGG - chr7_3:4249107-4249126 None:intergenic 35.0%
TGCCGAATACAAAACCAAAT+AGG - chr7_3:4249275-4249294 None:intergenic 35.0%
! AAATCTCGTTTTCGCGATAA+GGG - chr7_3:4249467-4249486 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG - chr7_3:4249468-4249487 None:intergenic 35.0%
ACATGAGATGTGAACCTATT+TGG + chr7_3:4250653-4250672 Msa1090320:intron 35.0%
! AAATCTCGTTTTCGCGATAA+GGG - chr7_3:4249467-4249486 None:intergenic 35.0%
! AAAATCTCGTTTTCGCGATA+AGG - chr7_3:4249468-4249487 None:intergenic 35.0%
CATATCATGTTTCGCATCAA+GGG - chr7_3:4249689-4249708 None:intergenic 35.0%
ACATATCATGTTTCGCATCA+AGG - chr7_3:4249690-4249709 None:intergenic 35.0%
! AGTATTGAAATGACCCTTGT+CGG + chr7_3:4249600-4249619 Msa1090320:intron 35.0%
TATCAAACTTGCAACCACAT+AGG - chr7_3:4251186-4251205 None:intergenic 35.0%
GTGGTTGCAAGTTTGATAAA+TGG + chr7_3:4251188-4251207 Msa1090320:intron 35.0%
!! TTTCACATAAAGGTACCTGA+GGG - chr7_3:4251218-4251237 None:intergenic 35.0%
!! ATTTCACATAAAGGTACCTG+AGG - chr7_3:4251219-4251238 None:intergenic 35.0%
! AGCCAAGTTTGTTTGGATTT+CGG + chr7_3:4251424-4251443 Msa1090320:intron 35.0%
TACCGAAATCCAAACAAACT+TGG - chr7_3:4251429-4251448 None:intergenic 35.0%
TTGTTTGGATTTCGGTAAAC+TGG + chr7_3:4251432-4251451 Msa1090320:intron 35.0%
! AAATCCAATTTTCGCGTCAA+GGG - chr7_3:4251653-4251672 None:intergenic 35.0%
! AAAATCCAATTTTCGCGTCA+AGG - chr7_3:4251654-4251673 None:intergenic 35.0%
GTTCTCAAACTTCTAAACGA+GGG - chr7_3:4251802-4251821 None:intergenic 35.0%
GTTTAGAAGTTTGAGAACGA+AGG + chr7_3:4251804-4251823 Msa1090320:intron 35.0%
TTTCCAAACAAGGGTCATTA+AGG - chr7_3:4251913-4251932 None:intergenic 35.0%
! AATGACCCTTGTTTGGAAAA+TGG + chr7_3:4251914-4251933 Msa1090320:intron 35.0%
! TCGATCCATTTTCCAAACAA+GGG - chr7_3:4251922-4251941 None:intergenic 35.0%
! ATCGATCCATTTTCCAAACA+AGG - chr7_3:4251923-4251942 None:intergenic 35.0%
TTTGGAAAATGGATCGATAG+TGG + chr7_3:4251925-4251944 Msa1090320:intron 35.0%
TATCAAATACAACAGCCTAC+AGG - chr7_3:4251969-4251988 None:intergenic 35.0%
AAAGATCCAACTCTAACTCT+TGG - chr7_3:4251993-4252012 None:intergenic 35.0%
!! AGAGTTGGATCTTTCAAGTT+TGG + chr7_3:4251999-4252018 Msa1090320:three_prime_UTR 35.0%
TTCACATACGACAACAAACA+TGG + chr7_3:4252130-4252149 Msa1090320:intron 35.0%
! AACTTTATCTGCGACTGTTT+TGG + chr7_3:4252168-4252187 Msa1090320:three_prime_UTR 35.0%
TACAATTCGCCAACTTTCAT+TGG + chr7_3:4252213-4252232 Msa1090320:three_prime_UTR 35.0%
ACAATTCGCCAACTTTCATT+GGG + chr7_3:4252214-4252233 Msa1090320:three_prime_UTR 35.0%
! TACCTACCCTTTTAGATACA+AGG - chr7_3:4252243-4252262 None:intergenic 35.0%
AACCGTGAGTGTAACTAAAT+AGG - chr7_3:4252361-4252380 None:intergenic 35.0%
AGGTTGTGTAAAAAATGGGA+AGG + chr7_3:4252985-4253004 Msa1090320:three_prime_UTR 35.0%
AAGAAAATACTTTGCTGCAG+AGG - chr7_3:4253014-4253033 None:intergenic 35.0%
TCATCTGAATCCAACAATGT+AGG + chr7_3:4253048-4253067 Msa1090320:three_prime_UTR 35.0%
TAGGAAGACAATGCATCAAA+TGG + chr7_3:4253067-4253086 Msa1090320:three_prime_UTR 35.0%
AGGAAGACAATGCATCAAAT+GGG + chr7_3:4253068-4253087 Msa1090320:three_prime_UTR 35.0%
! AGAATCGATTCTCAGAAGCT+AGG + chr7_3:4237417-4237436 Msa1090320:CDS 40.0%
ACTCAATTCTACCAAAAGCC+AGG - chr7_3:4237446-4237465 None:intergenic 40.0%
TTGGTAGAATTGAGTTTGGG+AGG + chr7_3:4237451-4237470 Msa1090320:intron 40.0%
!!! TGGCTGTGATTTGTTTTTGC+AGG + chr7_3:4238104-4238123 Msa1090320:CDS 40.0%
!! GCAGGTTTAAATGGTTTGCT+TGG + chr7_3:4238122-4238141 Msa1090320:intron 40.0%
TACTGCATCAGACATATCAC+AGG - chr7_3:4238290-4238309 None:intergenic 40.0%
! ATGTTGCTCTCCTTGTGTTT+TGG + chr7_3:4238462-4238481 Msa1090320:intron 40.0%
ATCTGATGCATTGTCTTGCA+TGG + chr7_3:4238607-4238626 Msa1090320:intron 40.0%
CTACATGGTGATAATCAGGA+TGG + chr7_3:4238844-4238863 Msa1090320:CDS 40.0%
! GAAGCATTTCAGAAGAGTTC+AGG + chr7_3:4238941-4238960 Msa1090320:three_prime_UTR 40.0%
TCACCTGCATATTAGAGGTT+AGG + chr7_3:4239207-4239226 Msa1090320:intron 40.0%
CAGACTTGAAGGGATCAAAT+TGG + chr7_3:4239360-4239379 Msa1090320:intron 40.0%
TCACATGCAAGCTACACATA+TGG - chr7_3:4239464-4239483 None:intergenic 40.0%
AAGTTCAAAGAAGCTCTTCC+AGG + chr7_3:4239565-4239584 Msa1090320:intron 40.0%
TGTTGCATTTAAGCTACACC+TGG - chr7_3:4239586-4239605 None:intergenic 40.0%
ACTTGATTCAAGACCATGCT+TGG + chr7_3:4239605-4239624 Msa1090320:intron 40.0%
CCTGAAATCTTAACCAAGCA+TGG - chr7_3:4239621-4239640 None:intergenic 40.0%
CCATGCTTGGTTAAGATTTC+AGG + chr7_3:4239618-4239637 Msa1090320:intron 40.0%
TGAGTGTATTGAGTTCCGAT+TGG - chr7_3:4239868-4239887 None:intergenic 40.0%
CGGAACTCAATACACTCAAA+CGG + chr7_3:4239870-4239889 Msa1090320:intron 40.0%
!! GGCGTTTTATGGTGTTTTTG+GGG + chr7_3:4240642-4240661 Msa1090320:intron 40.0%
!!! TGCCCAGTTTTGGTGTTTTT+AGG + chr7_3:4240710-4240729 Msa1090320:intron 40.0%
CTGCCTAAAAACACCAAAAC+TGG - chr7_3:4240716-4240735 None:intergenic 40.0%
TAAAAGCAGATGGAAAGGAG+AGG - chr7_3:4241483-4241502 None:intergenic 40.0%
!! GGGTTTTATAGAGGAGATGA+AGG - chr7_3:4241628-4241647 None:intergenic 40.0%
! CCGATTGTGATTTTTCTCTG+AGG - chr7_3:4241649-4241668 None:intergenic 40.0%
GCGGATCTGAAAGAAAATAG+AGG - chr7_3:4241940-4241959 None:intergenic 40.0%
AACGTTGCCTGAAACTACAA+TGG + chr7_3:4242595-4242614 Msa1090320:three_prime_UTR 40.0%
AGCATCCAATAGATTCGTGT+AGG + chr7_3:4242892-4242911 Msa1090320:intron 40.0%
TTGTGTGCAGGAATCTCAAA+AGG + chr7_3:4243182-4243201 Msa1090320:intron 40.0%
TGTGTGCAGGAATCTCAAAA+GGG + chr7_3:4243183-4243202 Msa1090320:intron 40.0%
GTGGACAAAGGGTAAACATA+TGG - chr7_3:4243460-4243479 None:intergenic 40.0%
AGTCAGTAGAAGTGGACAAA+GGG - chr7_3:4243471-4243490 None:intergenic 40.0%
TAGTCAGTAGAAGTGGACAA+AGG - chr7_3:4243472-4243491 None:intergenic 40.0%
GCAATAGTAGTCAGTAGAAG+TGG - chr7_3:4243479-4243498 None:intergenic 40.0%
! GTTCTAAACTACTTGGGGTA+AGG + chr7_3:4244140-4244159 Msa1090320:intron 40.0%
TTCCAACTGCGAAAATGAAG+AGG + chr7_3:4244535-4244554 Msa1090320:intron 40.0%
! ATCCTCTTCATTTTCGCAGT+TGG - chr7_3:4244540-4244559 None:intergenic 40.0%
CTACAACAACATCACAACAC+TGG - chr7_3:4244757-4244776 None:intergenic 40.0%
GTCTCTGTATTAGAAAGCCA+TGG - chr7_3:4244976-4244995 None:intergenic 40.0%
GAAAGGAAAATGAGTCCAAG+AGG - chr7_3:4245075-4245094 None:intergenic 40.0%
ACGGGACAATCATTGAAAGT+AGG + chr7_3:4245148-4245167 Msa1090320:intron 40.0%
CGGGACAATCATTGAAAGTA+GGG + chr7_3:4245149-4245168 Msa1090320:intron 40.0%
GGGACAATCATTGAAAGTAG+GGG + chr7_3:4245150-4245169 Msa1090320:intron 40.0%
CGATCCATATTTGCTCATTG+TGG - chr7_3:4245227-4245246 None:intergenic 40.0%
TTTGTTTAGGGGATATGTGG+GGG + chr7_3:4245257-4245276 Msa1090320:intron 40.0%
TTGGAAGGATAGGAAGATGA+AGG + chr7_3:4245343-4245362 Msa1090320:intron 40.0%
TGGAAGGATAGGAAGATGAA+GGG + chr7_3:4245344-4245363 Msa1090320:intron 40.0%
TGAGACTCTCCTCCAATATT+GGG + chr7_3:4245400-4245419 Msa1090320:intron 40.0%
ACACAACACACATTTCTCCT+TGG - chr7_3:4245501-4245520 None:intergenic 40.0%
GTCTGATCTTCCTTTCATTG+AGG + chr7_3:4245519-4245538 Msa1090320:intron 40.0%
CAACTTCACTAACTACACCA+TGG - chr7_3:4245571-4245590 None:intergenic 40.0%
GTGTAGTTAGTGAAGTTGCA+TGG + chr7_3:4245573-4245592 Msa1090320:intron 40.0%
!! CTTGATTTGTGCAGGGTAAA+TGG + chr7_3:4245609-4245628 Msa1090320:intron 40.0%
TGTATGTTTGGGTGAGTGTT+TGG + chr7_3:4245693-4245712 Msa1090320:intron 40.0%
!! CTATTTCTATAGCAGCGAAC+AGG + chr7_3:4246123-4246142 Msa1090320:intron 40.0%
GAACGAAGGATAGATCTTCA+AGG - chr7_3:4246312-4246331 None:intergenic 40.0%
ACCTTATTGCAAGAGAGTAG+AGG + chr7_3:4246849-4246868 Msa1090320:intron 40.0%
ACCTCTACTCTCTTGCAATA+AGG - chr7_3:4246853-4246872 None:intergenic 40.0%
GGCAATTCGATGATTTCAGT+CGG + chr7_3:4247076-4247095 Msa1090320:three_prime_UTR 40.0%
GCAATTCGATGATTTCAGTC+GGG + chr7_3:4247077-4247096 Msa1090320:three_prime_UTR 40.0%
AACTTCCTTGTTGCTGAATC+GGG - chr7_3:4247142-4247161 None:intergenic 40.0%
GAACTTCCTTGTTGCTGAAT+CGG - chr7_3:4247143-4247162 None:intergenic 40.0%
! TTCTGGCTGAAAGTTCTACA+AGG + chr7_3:4247263-4247282 Msa1090320:three_prime_UTR 40.0%
GAAAGTTCTACAAGGCAACT+TGG + chr7_3:4247271-4247290 Msa1090320:three_prime_UTR 40.0%
AAGTTCTACAAGGCAACTTG+GGG + chr7_3:4247273-4247292 Msa1090320:three_prime_UTR 40.0%
TGGGGATAACATTGGTCAAA+AGG + chr7_3:4247291-4247310 Msa1090320:three_prime_UTR 40.0%
TATGTATAACAGTCGTGCAC+AGG + chr7_3:4247319-4247338 Msa1090320:three_prime_UTR 40.0%
!!! CCTGATGGTTGTTTTAATCC+AGG - chr7_3:4247483-4247502 None:intergenic 40.0%
CCTGGATTAAAACAACCATC+AGG + chr7_3:4247480-4247499 Msa1090320:three_prime_UTR 40.0%
!!! ACAGGGATTGATGCCATTTT+AGG - chr7_3:4247519-4247538 None:intergenic 40.0%
! GTTGAAGCATTCACCAATTG+TGG - chr7_3:4247607-4247626 None:intergenic 40.0%
CAATTGGTGAATGCTTCAAC+AGG + chr7_3:4247607-4247626 Msa1090320:three_prime_UTR 40.0%
AAACTTGACACTGATGCATC+TGG - chr7_3:4247745-4247764 None:intergenic 40.0%
GATAAGTTGTCAATCGGAAG+TGG + chr7_3:4247876-4247895 Msa1090320:three_prime_UTR 40.0%
! TTCTCATTTTCTGACTTCCC+TGG + chr7_3:4247950-4247969 Msa1090320:intron 40.0%
! TCTCATTTTCTGACTTCCCT+GGG + chr7_3:4247951-4247970 Msa1090320:intron 40.0%
ATACCTGTCTGTCTTACATG+TGG + chr7_3:4248070-4248089 Msa1090320:three_prime_UTR 40.0%
GCTAGTCCAAAAAAGGTTCA+GGG - chr7_3:4248308-4248327 None:intergenic 40.0%
AGAAGATGCATCAGAAACAC+AGG - chr7_3:4248583-4248602 None:intergenic 40.0%
TTCGCATTAAGGGACATCAA+GGG - chr7_3:4248816-4248835 None:intergenic 40.0%
TTTCGCATTAAGGGACATCA+AGG - chr7_3:4248817-4248836 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG - chr7_3:4249387-4249406 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG - chr7_3:4249388-4249407 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG - chr7_3:4249387-4249406 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG - chr7_3:4249388-4249407 None:intergenic 40.0%
TAAACAGTGAACTTGTCCCT+CGG + chr7_3:4249077-4249096 Msa1090320:intron 40.0%
CATCTCATGTTTCGCATCAA+GGG - chr7_3:4250643-4250662 None:intergenic 40.0%
ACATCTCATGTTTCGCATCA+AGG - chr7_3:4250644-4250663 None:intergenic 40.0%
TGCCGAATACCAAACCAAAT+AGG - chr7_3:4250812-4250831 None:intergenic 40.0%
TACGCAATAAAGGACATCGA+GGG - chr7_3:4249387-4249406 None:intergenic 40.0%
TTACGCAATAAAGGACATCG+AGG - chr7_3:4249388-4249407 None:intergenic 40.0%
AAACTGGATGCAAGAGATTG+TGG + chr7_3:4251448-4251467 Msa1090320:intron 40.0%
! ATTTTCGCGACAACTGTCAT+CGG - chr7_3:4251552-4251571 None:intergenic 40.0%
CTTCTAAACGAGGGTCATAA+AGG - chr7_3:4251793-4251812 None:intergenic 40.0%
CGTTCTCAAACTTCTAAACG+AGG - chr7_3:4251803-4251822 None:intergenic 40.0%
AATATTTGACGCTTGCCTGT+AGG + chr7_3:4251951-4251970 Msa1090320:intron 40.0%
TGATAGCCAAGAGTTAGAGT+TGG + chr7_3:4251984-4252003 Msa1090320:three_prime_UTR 40.0%
!!! GTTTTGGAAGAGACACTCAA+TGG + chr7_3:4252184-4252203 Msa1090320:three_prime_UTR 40.0%
TGGGACACCTTGTATCTAAA+AGG + chr7_3:4252233-4252252 Msa1090320:three_prime_UTR 40.0%
GGGACACCTTGTATCTAAAA+GGG + chr7_3:4252234-4252253 Msa1090320:three_prime_UTR 40.0%
CACCTTGTATCTAAAAGGGT+AGG + chr7_3:4252238-4252257 Msa1090320:intron 40.0%
CACGGTTATAGTCACATAAG+AGG + chr7_3:4252374-4252393 Msa1090320:three_prime_UTR 40.0%
AGGACAAAATGATGTACACC+TGG - chr7_3:4252801-4252820 None:intergenic 40.0%
! GGTGTACATCATTTTGTCCT+CGG + chr7_3:4252801-4252820 Msa1090320:intron 40.0%
GCATTGTCTTCCTACATTGT+TGG - chr7_3:4253061-4253080 None:intergenic 40.0%
! AAATCGCATTTTCGCGACAA+GGG - chr7_3:4253361-4253380 None:intergenic 40.0%
! AAAATCGCATTTTCGCGACA+AGG - chr7_3:4253362-4253381 None:intergenic 40.0%
TTCTCAGAAGCTAGGATTCC+TGG + chr7_3:4237425-4237444 Msa1090320:CDS 45.0%
!! AAGCTAGGATTCCTGGCTTT+TGG + chr7_3:4237432-4237451 Msa1090320:CDS 45.0%
TCCTAGGGTTTGCAAGAACT+CGG + chr7_3:4237578-4237597 Msa1090320:CDS 45.0%
!! TTGGCCTTTGCACAAGCTTT+TGG + chr7_3:4238080-4238099 Msa1090320:CDS 45.0%
! TGGCCTTTGCACAAGCTTTT+GGG + chr7_3:4238081-4238100 Msa1090320:CDS 45.0%
! GGTGCTACATGGTGATAATC+AGG + chr7_3:4238840-4238859 Msa1090320:CDS 45.0%
CCTCCTAACCTCTAATATGC+AGG - chr7_3:4239213-4239232 None:intergenic 45.0%
CCTGCATATTAGAGGTTAGG+AGG + chr7_3:4239210-4239229 Msa1090320:intron 45.0%
TCCGTTGTCTTCAGACTTGA+AGG + chr7_3:4239349-4239368 Msa1090320:intron 45.0%
CCCTTCAAGTCTGAAGACAA+CGG - chr7_3:4239353-4239372 None:intergenic 45.0%
CCGTTGTCTTCAGACTTGAA+GGG + chr7_3:4239350-4239369 Msa1090320:intron 45.0%
! TGTGTAGCTTGCATGTGACT+AGG + chr7_3:4239466-4239485 Msa1090320:intron 45.0%
! TTAGAGAGAGTGTGAGAGCT+AGG - chr7_3:4239786-4239805 None:intergenic 45.0%
!! CCTAACCTAGCTTTGAATCG+CGG + chr7_3:4239832-4239851 Msa1090320:intron 45.0%
TTGAACCGCGATTCAAAGCT+AGG - chr7_3:4239840-4239859 None:intergenic 45.0%
! GCTTTGAATCGCGGTTCAAT+CGG + chr7_3:4239841-4239860 Msa1090320:intron 45.0%
ACACTCAAACGGTGCTCAAA+TGG + chr7_3:4239881-4239900 Msa1090320:intron 45.0%
CAAGCCAAGCATGTAAGATG+AGG + chr7_3:4240374-4240393 Msa1090320:intron 45.0%
GTGATCTTCTAGCCAAGACT+TGG - chr7_3:4240895-4240914 None:intergenic 45.0%
ACAACCATCATCTTCTCCCT+TGG + chr7_3:4241549-4241568 Msa1090320:intron 45.0%
AGATCCAAGGGAGAAGATGA+TGG - chr7_3:4241556-4241575 None:intergenic 45.0%
TCATCTTCTCCCTTGGATCT+CGG + chr7_3:4241556-4241575 Msa1090320:intron 45.0%
! GATGAAGGGGAGTCTTTTTC+AGG - chr7_3:4241613-4241632 None:intergenic 45.0%
!! TGGAAGTGTCATTTCCGGTA+CGG - chr7_3:4241711-4241730 None:intergenic 45.0%
ACAACGTTATTCTGTCACGG+TGG - chr7_3:4241731-4241750 None:intergenic 45.0%
TCCGCAAAAAGCTTCGCTTT+CGG + chr7_3:4241961-4241980 Msa1090320:three_prime_UTR 45.0%
! ACCGAAAGCGAAGCTTTTTG+CGG - chr7_3:4241965-4241984 None:intergenic 45.0%
! GTCACTTTCAAGCTCAACCA+TGG + chr7_3:4241983-4242002 Msa1090320:three_prime_UTR 45.0%
AGCTCAACCATGGAGTTTAG+CGG + chr7_3:4241993-4242012 Msa1090320:three_prime_UTR 45.0%
! CGCCTTATTCACATCCACAA+GGG + chr7_3:4242087-4242106 Msa1090320:intron 45.0%
GACCCTTGTGGATGTGAATA+AGG - chr7_3:4242092-4242111 None:intergenic 45.0%
! GTTGTTGTTGCTGCATGTGT+GGG - chr7_3:4242114-4242133 None:intergenic 45.0%
! TGTTGTTGTTGCTGCATGTG+TGG - chr7_3:4242115-4242134 None:intergenic 45.0%
ATCTGATTCAAGCTGCAGAG+TGG - chr7_3:4243246-4243265 None:intergenic 45.0%
CTTAATGAAGAGGCGAGTGT+AGG - chr7_3:4244454-4244473 None:intergenic 45.0%
GGATAGGAAGATGAAGGGAT+TGG + chr7_3:4245349-4245368 Msa1090320:intron 45.0%
TAGGAAGATGAAGGGATTGG+AGG + chr7_3:4245352-4245371 Msa1090320:intron 45.0%
AGGAAGATGAAGGGATTGGA+GGG + chr7_3:4245353-4245372 Msa1090320:intron 45.0%
GTGAGACTCTCCTCCAATAT+TGG + chr7_3:4245399-4245418 Msa1090320:intron 45.0%
AGGGAGAGAACCTCAATGAA+AGG - chr7_3:4245532-4245551 None:intergenic 45.0%
GTGCAGGGTAAATGGGAAAA+TGG + chr7_3:4245617-4245636 Msa1090320:intron 45.0%
TGGCCTGCTTTGTGTATGTT+TGG + chr7_3:4245681-4245700 Msa1090320:intron 45.0%
GGCCTGCTTTGTGTATGTTT+GGG + chr7_3:4245682-4245701 Msa1090320:intron 45.0%
CACCCAAACATACACAAAGC+AGG - chr7_3:4245687-4245706 None:intergenic 45.0%
TAATTCTCTCGGAGAGACTC+AGG + chr7_3:4246042-4246061 Msa1090320:intron 45.0%
GACCCATGAAGTACAAACAC+CGG + chr7_3:4246150-4246169 Msa1090320:intron 45.0%
GTCCGGTGTTTGTACTTCAT+GGG - chr7_3:4246155-4246174 None:intergenic 45.0%
TGTCCGGTGTTTGTACTTCA+TGG - chr7_3:4246156-4246175 None:intergenic 45.0%
CACCGGACATGACACTAATA+TGG + chr7_3:4246167-4246186 Msa1090320:intron 45.0%
!!! TTATTTTGGGGACCAACCTG+AGG + chr7_3:4246643-4246662 Msa1090320:intron 45.0%
TCGGGAACCATTGAACTACA+AGG + chr7_3:4247095-4247114 Msa1090320:three_prime_UTR 45.0%
ACTTCCTTGTTGCTGAATCG+GGG - chr7_3:4247141-4247160 None:intergenic 45.0%
AACAAGGAAGTTCCAGCTGT+AGG + chr7_3:4247150-4247169 Msa1090320:three_prime_UTR 45.0%
AGGCAACTTGGGGATAACAT+TGG + chr7_3:4247283-4247302 Msa1090320:three_prime_UTR 45.0%
ATGGTTCCAAGCGTGACATT+AGG + chr7_3:4247345-4247364 Msa1090320:three_prime_UTR 45.0%
TGGTTCCAAGCGTGACATTA+GGG + chr7_3:4247346-4247365 Msa1090320:three_prime_UTR 45.0%
AAAACAACCATCAGGGTGTG+TGG + chr7_3:4247488-4247507 Msa1090320:three_prime_UTR 45.0%
GTGTGTGGCTTCACCTAAAA+TGG + chr7_3:4247503-4247522 Msa1090320:three_prime_UTR 45.0%
ATGGCATCAATCCCTGTTGA+AGG + chr7_3:4247522-4247541 Msa1090320:three_prime_UTR 45.0%
TCTAATATGACAGACCCTGC+TGG + chr7_3:4247631-4247650 Msa1090320:three_prime_UTR 45.0%
TTGTCAATCGGAAGTGGAGA+TGG + chr7_3:4247882-4247901 Msa1090320:three_prime_UTR 45.0%
CAACTTAGCTGTCTCTGACT+CGG - chr7_3:4247920-4247939 None:intergenic 45.0%
TGTCTTACATGTGGCGATGT+AGG + chr7_3:4248079-4248098 Msa1090320:three_prime_UTR 45.0%
!! TGTAGGCTTTGAAGAGACGT+TGG + chr7_3:4248096-4248115 Msa1090320:three_prime_UTR 45.0%
GTAAAGCTTGTGCACTGCAT+AGG + chr7_3:4248134-4248153 Msa1090320:three_prime_UTR 45.0%
! GGCTAGTCCAAAAAAGGTTC+AGG - chr7_3:4248309-4248328 None:intergenic 45.0%
!! AGATGGGGCTAGTCCAAAAA+AGG - chr7_3:4248315-4248334 None:intergenic 45.0%
TTCGTATCAAGGGAGATCGA+GGG - chr7_3:4249238-4249257 None:intergenic 45.0%
TTTCGTATCAAGGGAGATCG+AGG - chr7_3:4249239-4249258 None:intergenic 45.0%
TTCGCATCAAGAGACATCGA+GGG - chr7_3:4249679-4249698 None:intergenic 45.0%
TTTCGCATCAAGAGACATCG+AGG - chr7_3:4249680-4249699 None:intergenic 45.0%
TTCGTATCAAGGGAGATCGA+GGG - chr7_3:4249238-4249257 None:intergenic 45.0%
TTTCGTATCAAGGGAGATCG+AGG - chr7_3:4249239-4249258 None:intergenic 45.0%
TTCGCATCAAGAGACATCGA+GGG - chr7_3:4249679-4249698 None:intergenic 45.0%
TTTCGCATCAAGAGACATCG+AGG - chr7_3:4249680-4249699 None:intergenic 45.0%
TTCGTATCAAGCGAGATCGA+GGG - chr7_3:4250775-4250794 None:intergenic 45.0%
TTTCGTATCAAGCGAGATCG+AGG - chr7_3:4250776-4250795 None:intergenic 45.0%
TTGATAAATGGGAAGCCCTC+AGG + chr7_3:4251200-4251219 Msa1090320:intron 45.0%
TTTCGCATCAAGGGATATCG+AGG - chr7_3:4251393-4251412 None:intergenic 45.0%
ATGACCCTTGACGCGAAAAT+TGG + chr7_3:4251646-4251665 Msa1090320:intron 45.0%
! CAAGGTGTCCCAATGAAAGT+TGG - chr7_3:4252225-4252244 None:intergenic 45.0%
!! CTTTGCTGCTTTCATGTCAC+AGG + chr7_3:4252314-4252333 Msa1090320:intron 45.0%
ACATAAGAGGAAGCAAGAGC+TGG + chr7_3:4252387-4252406 Msa1090320:three_prime_UTR 45.0%
AGCACATTATGTTCACACCG+AGG - chr7_3:4252821-4252840 None:intergenic 45.0%
TATGCATCAAGGGACATCGA+CGG - chr7_3:4253281-4253300 None:intergenic 45.0%
!!! TTAAAAGTATATTAATTTTT+GGG + chr7_3:4241061-4241080 Msa1090320:intron 5.0%
!!! TTTTATTTTTGTTTTAATTA+AGG + chr7_3:4241841-4241860 Msa1090320:intron 5.0%
!!! TGTTTTTTTTTTTTTTTTTT+TGG + chr7_3:4242972-4242991 Msa1090320:intron 5.0%
!! TTATTATAAAATTGTTAAAT+AGG + chr7_3:4251509-4251528 Msa1090320:intron 5.0%
!! TATTATAAAATTGTTAAATA+GGG + chr7_3:4251510-4251529 Msa1090320:intron 5.0%
! TTTGAAGCGCTAGACTCGCT+CGG - chr7_3:4237495-4237514 None:intergenic 50.0%
TCTTGAAATCTCAGCGCGCA+AGG + chr7_3:4237555-4237574 Msa1090320:intron 50.0%
GGTTTGCAAGAACTCGGCTA+CGG + chr7_3:4237584-4237603 Msa1090320:CDS 50.0%
CCACCCAAAAGCTTGTGCAA+AGG - chr7_3:4238087-4238106 None:intergenic 50.0%
! CCTTTGCACAAGCTTTTGGG+TGG + chr7_3:4238084-4238103 Msa1090320:CDS 50.0%
ACGACGCATACACAGATGCA+TGG + chr7_3:4238348-4238367 Msa1090320:intron 50.0%
AGCACCTTGAGCAAGACAAG+AGG + chr7_3:4238818-4238837 Msa1090320:CDS 50.0%
GCACCTTGAGCAAGACAAGA+GGG + chr7_3:4238819-4238838 Msa1090320:CDS 50.0%
!! CAAGACAAGAGGGTGCTACA+TGG + chr7_3:4238829-4238848 Msa1090320:CDS 50.0%
!! CCTGCTTTAAAGGAGAGCAG+TGG - chr7_3:4238972-4238991 None:intergenic 50.0%
!! CCACTGCTCTCCTTTAAAGC+AGG + chr7_3:4238969-4238988 Msa1090320:three_prime_UTR 50.0%
CACATATGGACTTCCCTGTC+TGG - chr7_3:4239450-4239469 None:intergenic 50.0%
GTGAGAGCTAGGTTAGGTTC+TGG - chr7_3:4239775-4239794 None:intergenic 50.0%
! GAGAGTGTGAGAGCTAGGTT+AGG - chr7_3:4239781-4239800 None:intergenic 50.0%
CCGCGATTCAAAGCTAGGTT+AGG - chr7_3:4239835-4239854 None:intergenic 50.0%
GGTGTTCACCCAATCTGTTC+TGG + chr7_3:4239978-4239997 Msa1090320:intron 50.0%
! AGCTGTTCTGTGCCCAGTTT+TGG + chr7_3:4240700-4240719 Msa1090320:intron 50.0%
TTGTCTGTAATAGCCCCTGC+TGG + chr7_3:4240745-4240764 Msa1090320:intron 50.0%
TGTCTGTAATAGCCCCTGCT+GGG + chr7_3:4240746-4240765 Msa1090320:intron 50.0%
ACCAAAAACACCTACTGCCC+TGG - chr7_3:4240787-4240806 None:intergenic 50.0%
!!! AGGGCAGTAGGTGTTTTTGG+TGG + chr7_3:4240786-4240805 Msa1090320:intron 50.0%
TAGCTCCTGCAACCAAGTCT+TGG + chr7_3:4240880-4240899 Msa1090320:intron 50.0%
! TCTAGCCAAGACTTGGTTGC+AGG - chr7_3:4240888-4240907 None:intergenic 50.0%
AGGTAGCCGTGAACAGTGTA+CGG - chr7_3:4241413-4241432 None:intergenic 50.0%
AAGGCGGTCGGAAACATATG+AGG - chr7_3:4241433-4241452 None:intergenic 50.0%
CATATGTTTCCGACCGCCTT+TGG + chr7_3:4241433-4241452 Msa1090320:intron 50.0%
! GATGATGGCACAACCAAAGG+CGG - chr7_3:4241449-4241468 None:intergenic 50.0%
!! GGTGATGATGGCACAACCAA+AGG - chr7_3:4241452-4241471 None:intergenic 50.0%
TGGAAAGGAGAGGATGACGA+CGG - chr7_3:4241473-4241492 None:intergenic 50.0%
!! TTTTCTGGTGACCACCGTTC+CGG + chr7_3:4241673-4241692 Msa1090320:intron 50.0%
!! CACGGTGGAAGTGTCATTTC+CGG - chr7_3:4241716-4241735 None:intergenic 50.0%
! GAAAGCGAAGCTTTTTGCGG+AGG - chr7_3:4241962-4241981 None:intergenic 50.0%
AGATCTGCCGCTAAACTCCA+TGG - chr7_3:4242003-4242022 None:intergenic 50.0%
! GCGCCTTATTCACATCCACA+AGG + chr7_3:4242086-4242105 Msa1090320:intron 50.0%
!! TGTCTTCGTGCTGTTTGTCC+TGG - chr7_3:4243356-4243375 None:intergenic 50.0%
TTAGGGGATATGTGGGGGAT+AGG + chr7_3:4245262-4245281 Msa1090320:intron 50.0%
GGATATGTGGGGGATAGGAT+GGG + chr7_3:4245267-4245286 Msa1090320:intron 50.0%
GATATGTGGGGGATAGGATG+GGG + chr7_3:4245268-4245287 Msa1090320:intron 50.0%
ATATGTGGGGGATAGGATGG+GGG + chr7_3:4245269-4245288 Msa1090320:intron 50.0%
GGAAGATGAAGGGATTGGAG+GGG + chr7_3:4245354-4245373 Msa1090320:intron 50.0%
! TGGAGATTATGCTGGTGCCA+AGG + chr7_3:4247189-4247208 Msa1090320:three_prime_UTR 50.0%
AACAGTCGTGCACAGGATGA+TGG + chr7_3:4247326-4247345 Msa1090320:three_prime_UTR 50.0%
GGTTCCAAGCGTGACATTAG+GGG + chr7_3:4247347-4247366 Msa1090320:three_prime_UTR 50.0%
CTTGACACTGATGCATCTGG+CGG - chr7_3:4247742-4247761 None:intergenic 50.0%
ACTGGAGCTTCCGATACTTG+AGG - chr7_3:4247808-4247827 None:intergenic 50.0%
!! TCAAGTATCGGAAGCTCCAG+TGG + chr7_3:4247807-4247826 Msa1090320:three_prime_UTR 50.0%
!! GCAAGAGCATCAATCTCCAC+TGG - chr7_3:4247826-4247845 None:intergenic 50.0%
GGAGATTGATGCTCTTGCAG+AGG + chr7_3:4247828-4247847 Msa1090320:three_prime_UTR 50.0%
AGAGACAGCTAAGTTGCCTC+AGG + chr7_3:4247924-4247943 Msa1090320:three_prime_UTR 50.0%
TCGCCACATGTAAGACAGAC+AGG - chr7_3:4248076-4248095 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4249096-4249115 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4249097-4249116 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4249096-4249115 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4249097-4249116 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4249096-4249115 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4249097-4249116 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4249096-4249115 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4249097-4249116 None:intergenic 50.0%
TTCGCATCAAGGGACATCGA+GGG - chr7_3:4249096-4249115 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr7_3:4249097-4249116 None:intergenic 50.0%
GCGCCTTAATGACCCTTGTT+TGG + chr7_3:4251907-4251926 Msa1090320:intron 50.0%
GCCGAGTTCTTGCAAACCCT+AGG - chr7_3:4237582-4237601 None:intergenic 55.0%
TTGCAAGAACTCGGCTACGG+CGG + chr7_3:4237587-4237606 Msa1090320:CDS 55.0%
GCACCCTCTTGTCTTGCTCA+AGG - chr7_3:4238825-4238844 None:intergenic 55.0%
CGCGGTTCAATCGGTCCAAT+CGG + chr7_3:4239850-4239869 Msa1090320:intron 55.0%
!!! GGTGTTTTTGGGGCTGTTGC+TGG + chr7_3:4240652-4240671 Msa1090320:intron 55.0%
AGCTAAAACAGCGCCCAGCA+GGG - chr7_3:4240762-4240781 None:intergenic 55.0%
!! TTTTAGCTGGCCAGGGCAGT+AGG + chr7_3:4240774-4240793 Msa1090320:intron 55.0%
! GCCAGGGCAGTAGGTGTTTT+TGG + chr7_3:4240783-4240802 Msa1090320:intron 55.0%
!! CGGCTAGGGTTTGTTACAGG+GGG - chr7_3:4241390-4241409 None:intergenic 55.0%
!! GCGGCTAGGGTTTGTTACAG+GGG - chr7_3:4241391-4241410 None:intergenic 55.0%
!! GGCGGCTAGGGTTTGTTACA+GGG - chr7_3:4241392-4241411 None:intergenic 55.0%
TGAACAGTGTACGGCGGCTA+GGG - chr7_3:4241404-4241423 None:intergenic 55.0%
TAGCCGCCGTACACTGTTCA+CGG + chr7_3:4241404-4241423 Msa1090320:intron 55.0%
TAGCCGTGAACAGTGTACGG+CGG - chr7_3:4241410-4241429 None:intergenic 55.0%
ATGGCACAACCAAAGGCGGT+CGG - chr7_3:4241445-4241464 None:intergenic 55.0%
GAGGATGACGACGGTGATGA+TGG - chr7_3:4241464-4241483 None:intergenic 55.0%
CTACGATGGCCGAGATCCAA+GGG - chr7_3:4241568-4241587 None:intergenic 55.0%
TCTACGATGGCCGAGATCCA+AGG - chr7_3:4241569-4241588 None:intergenic 55.0%
GATGGTGATTTCCGGAACGG+TGG - chr7_3:4241687-4241706 None:intergenic 55.0%
GGCGATGGTGATTTCCGGAA+CGG - chr7_3:4241690-4241709 None:intergenic 55.0%
GGTACGGCGATGGTGATTTC+CGG - chr7_3:4241695-4241714 None:intergenic 55.0%
GGAAATCACCATCGCCGTAC+CGG + chr7_3:4241694-4241713 Msa1090320:intron 55.0%
! TGTCATTTCCGGTACGGCGA+TGG - chr7_3:4241705-4241724 None:intergenic 55.0%
! AGCGAAGCTTTTTGCGGAGG+CGG - chr7_3:4241959-4241978 None:intergenic 55.0%
GGGATATGTGGGGGATAGGA+TGG + chr7_3:4245266-4245285 Msa1090320:intron 55.0%
TGGGGGAGAGAGTGGATGAA+AGG + chr7_3:4245286-4245305 Msa1090320:intron 55.0%
AGCTCCCCGATTCAGCAACA+AGG + chr7_3:4247134-4247153 Msa1090320:three_prime_UTR 55.0%
! TATGCTGGTGCCAAGGATCG+CGG + chr7_3:4247196-4247215 Msa1090320:three_prime_UTR 55.0%
TGCCAAGGATCGCGGTTTCA+AGG + chr7_3:4247204-4247223 Msa1090320:three_prime_UTR 55.0%
CACCTTGAAACCGCGATCCT+TGG - chr7_3:4247209-4247228 None:intergenic 55.0%
CAAGGATCGCGGTTTCAAGG+TGG + chr7_3:4247207-4247226 Msa1090320:three_prime_UTR 55.0%
TTCGCATCAAGGGACACCGA+GGG - chr7_3:4250633-4250652 None:intergenic 55.0%
TTTCGCATCAAGGGACACCG+AGG - chr7_3:4250634-4250653 None:intergenic 55.0%
ATCTCAGCGCGCAAGGTCCT+AGG + chr7_3:4237562-4237581 Msa1090320:intron 60.0%
TCTCAGCGCGCAAGGTCCTA+GGG + chr7_3:4237563-4237582 Msa1090320:intron 60.0%
TGCAAGAACTCGGCTACGGC+GGG + chr7_3:4237588-4237607 Msa1090320:CDS 60.0%
GCTAAAACAGCGCCCAGCAG+GGG - chr7_3:4240761-4240780 None:intergenic 60.0%
CAGCTAAAACAGCGCCCAGC+AGG - chr7_3:4240763-4240782 None:intergenic 60.0%
!!! CTGCTGGGCGCTGTTTTAGC+TGG + chr7_3:4240761-4240780 Msa1090320:intron 60.0%
!!! GGCGCTGTTTTAGCTGGCCA+GGG + chr7_3:4240767-4240786 Msa1090320:intron 60.0%
!! CGGCGGCTAGGGTTTGTTAC+AGG - chr7_3:4241393-4241412 None:intergenic 60.0%
GTGAACAGTGTACGGCGGCT+AGG - chr7_3:4241405-4241424 None:intergenic 60.0%
CTGCATGTGTGGGACCCTTG+TGG - chr7_3:4242104-4242123 None:intergenic 60.0%
GGATAGGATGGGGGAGAGAG+TGG + chr7_3:4245278-4245297 Msa1090320:intron 60.0%
GGCTCCCCTAATGTCACGCT+TGG - chr7_3:4247354-4247373 None:intergenic 60.0%
GGTGAAGCCACACACCCTGA+TGG - chr7_3:4247498-4247517 None:intergenic 60.0%
CACTGATGCATCTGGCGGTG+CGG - chr7_3:4247737-4247756 None:intergenic 60.0%
!!! GGGCGCTGTTTTAGCTGGCC+AGG + chr7_3:4240766-4240785 Msa1090320:intron 65.0%
TCTGGCGGTGCGGATGCAAG+TGG - chr7_3:4247727-4247746 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 4237383 4253490 4237383 ID=Msa1090320;Name=Msa1090320
chr7_3 mRNA 4237383 4253490 4237383 ID=Msa1090320-mRNA-1;Parent=Msa1090320;Name=Msa1090320-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.76|0.78|0.92|0.38|0.42|14|2456|125
chr7_3 exon 4237383 4237453 4237383 ID=Msa1090320-mRNA-1:exon:1583;Parent=Msa1090320-mRNA-1
chr7_3 exon 4237569 4237617 4237569 ID=Msa1090320-mRNA-1:exon:1584;Parent=Msa1090320-mRNA-1
chr7_3 exon 4238060 4238125 4238060 ID=Msa1090320-mRNA-1:exon:1585;Parent=Msa1090320-mRNA-1
chr7_3 exon 4238742 4238990 4238742 ID=Msa1090320-mRNA-1:exon:1586;Parent=Msa1090320-mRNA-1
chr7_3 exon 4241954 4242036 4241954 ID=Msa1090320-mRNA-1:exon:1587;Parent=Msa1090320-mRNA-1
chr7_3 exon 4242553 4242683 4242553 ID=Msa1090320-mRNA-1:exon:1588;Parent=Msa1090320-mRNA-1
chr7_3 exon 4243192 4243276 4243192 ID=Msa1090320-mRNA-1:exon:1589;Parent=Msa1090320-mRNA-1
chr7_3 exon 4243357 4243434 4243357 ID=Msa1090320-mRNA-1:exon:1590;Parent=Msa1090320-mRNA-1
chr7_3 exon 4247014 4247945 4247014 ID=Msa1090320-mRNA-1:exon:1591;Parent=Msa1090320-mRNA-1
chr7_3 exon 4248070 4248155 4248070 ID=Msa1090320-mRNA-1:exon:1592;Parent=Msa1090320-mRNA-1
chr7_3 exon 4251973 4252049 4251973 ID=Msa1090320-mRNA-1:exon:1593;Parent=Msa1090320-mRNA-1
chr7_3 exon 4252166 4252255 4252166 ID=Msa1090320-mRNA-1:exon:1594;Parent=Msa1090320-mRNA-1
chr7_3 exon 4252336 4252483 4252336 ID=Msa1090320-mRNA-1:exon:1595;Parent=Msa1090320-mRNA-1
chr7_3 exon 4252802 4253490 4252802 ID=Msa1090320-mRNA-1:exon:1596;Parent=Msa1090320-mRNA-1
chr7_3 CDS 4237383 4237453 4237383 ID=Msa1090320-mRNA-1:cds;Parent=Msa1090320-mRNA-1
chr7_3 CDS 4237569 4237617 4237569 ID=Msa1090320-mRNA-1:cds;Parent=Msa1090320-mRNA-1
chr7_3 CDS 4238060 4238125 4238060 ID=Msa1090320-mRNA-1:cds;Parent=Msa1090320-mRNA-1
chr7_3 CDS 4238742 4238933 4238742 ID=Msa1090320-mRNA-1:cds;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4238934 4238990 4238934 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4241954 4242036 4241954 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4242553 4242683 4242553 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4243192 4243276 4243192 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4243357 4243434 4243357 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4247014 4247945 4247014 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4248070 4248155 4248070 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4251973 4252049 4251973 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4252166 4252255 4252166 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4252336 4252483 4252336 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
chr7_3 three_prime_UTR 4252802 4253490 4252802 ID=Msa1090320-mRNA-1:three_prime_utr;Parent=Msa1090320-mRNA-1
Gene Sequence

>Msa1090320

ATGAATTCGGAAATTGTAACCCAACAACAAATTGAGAATCGATTCTCAGAAGCTAGGATTCCTGGCTTTTGCGCGCAAGGTCCTAGGGTTTGCAAGAACTCGGCTACGGCGGGATTTTCATGTAATTTTCAACACACTATTTGGCCTTTGCACAAGCTTTTGGGTGGCTGTGATTTGTTTTTGCAGGTAAATGCGTTATCTCATATTGCTGAAGTGAAATTGAACTCTGATGGCCTTGCTGCCATTAAGAAATTGATACAAAAGCACCTTGAGCAAGACAAGAGGGTGCTACATGGTGATAATCAGGATGGAGAGACCACTGTTGACATGCTTGATAATTCATCTTCTTCCATAAATTCTTCAGACGAGAAAAATTAG

Protein sequence

>Msa1090320

MNSEIVTQQQIENRFSEARIPGFCAQGPRVCKNSATAGFSCNFQHTIWPLHKLLGGCDLFLQVNALSHIAEVKLNSDGLAAIKKLIQKHLEQDKRVLHGDNQDGETTVDMLDNSSSSINSSDEKN*