Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773310 | G7KBE5 | 95.876 | 194 | 1 | 2 | 1 | 193 | 1 | 188 | 3.01e-129 | 370 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029850 | Msa0773310 | 0.827135 | 1.848686e-54 | -8.615850e-47 |
| Msa0042550 | Msa0773310 | 0.837779 | 4.248989e-57 | -8.615850e-47 |
| Msa0050380 | Msa0773310 | 0.806853 | 6.722908e-50 | -8.615850e-47 |
| Msa0055070 | Msa0773310 | 0.819987 | 8.702767e-53 | -8.615850e-47 |
| Msa0056450 | Msa0773310 | 0.802644 | 5.087477e-49 | -8.615850e-47 |
| Msa0058600 | Msa0773310 | 0.825081 | 5.694673e-54 | -8.615850e-47 |
| Msa0064110 | Msa0773310 | 0.838364 | 3.004740e-57 | -8.615850e-47 |
| Msa0076700 | Msa0773310 | 0.826849 | 2.164621e-54 | -8.615850e-47 |
| Msa0077180 | Msa0773310 | 0.828001 | 1.145596e-54 | -8.615850e-47 |
| Msa0077450 | Msa0773310 | 0.836545 | 8.789819e-57 | -8.615850e-47 |
| Msa0085720 | Msa0773310 | 0.834820 | 2.403160e-56 | -8.615850e-47 |
| Msa0092440 | Msa0773310 | 0.819657 | 1.034977e-52 | -8.615850e-47 |
| Msa0101020 | Msa0773310 | 0.822572 | 2.205185e-53 | -8.615850e-47 |
| Msa0102120 | Msa0773310 | 0.801908 | 7.211522e-49 | -8.615850e-47 |
| Msa0603370 | Msa0773310 | 0.819706 | 1.008923e-52 | -8.615850e-47 |
| Msa0613460 | Msa0773310 | 0.845764 | 3.312495e-59 | -8.615850e-47 |
| Msa0622600 | Msa0773310 | 0.808805 | 2.586099e-50 | -8.615850e-47 |
| Msa0626990 | Msa0773310 | 0.848351 | 6.476978e-60 | -8.615850e-47 |
| Msa0627350 | Msa0773310 | 0.847152 | 1.385299e-59 | -8.615850e-47 |
| Msa0653440 | Msa0773310 | 0.822982 | 1.769524e-53 | -8.615850e-47 |
| Msa0654010 | Msa0773310 | 0.802868 | 4.574428e-49 | -8.615850e-47 |
| Msa0667740 | Msa0773310 | 0.804308 | 2.299114e-49 | -8.615850e-47 |
| Msa0679550 | Msa0773310 | 0.828435 | 9.004286e-55 | -8.615850e-47 |
| Msa0691050 | Msa0773310 | 0.804226 | 2.390821e-49 | -8.615850e-47 |
| Msa0695870 | Msa0773310 | 0.830759 | 2.450300e-55 | -8.615850e-47 |
| Msa0698930 | Msa0773310 | 0.813724 | 2.214879e-51 | -8.615850e-47 |
| Msa0713240 | Msa0773310 | 0.822858 | 1.892056e-53 | -8.615850e-47 |
| Msa0715410 | Msa0773310 | 0.825944 | 3.556405e-54 | -8.615850e-47 |
| Msa0724950 | Msa0773310 | 0.820820 | 5.604719e-53 | -8.615850e-47 |
| Msa0731180 | Msa0773310 | 0.812594 | 3.919384e-51 | -8.615850e-47 |
| Msa0735160 | Msa0773310 | 0.882683 | 8.477976e-71 | -8.615850e-47 |
| Msa0741160 | Msa0773310 | 0.818328 | 2.075890e-52 | -8.615850e-47 |
| Msa0749440 | Msa0773310 | 0.800227 | 1.590990e-48 | -8.615850e-47 |
| Msa0755070 | Msa0773310 | 0.837047 | 6.544379e-57 | -8.615850e-47 |
| Msa0763080 | Msa0773310 | 0.813793 | 2.138548e-51 | -8.615850e-47 |
| Msa0766090 | Msa0773310 | 0.821777 | 3.371752e-53 | -8.615850e-47 |
| Msa0773310 | Msa0780280 | 0.825266 | 5.148815e-54 | -8.615850e-47 |
| Msa0773310 | Msa0795070 | 0.805963 | 1.035812e-49 | -8.615850e-47 |
| Msa0773310 | Msa0800770 | 0.827530 | 1.486600e-54 | -8.615850e-47 |
| Msa0773310 | Msa0807030 | 0.804357 | 2.245466e-49 | -8.615850e-47 |
| Msa0773310 | Msa0810760 | 0.944278 | 2.615449e-103 | -8.615850e-47 |
| Msa0773310 | Msa0818110 | 0.826083 | 3.296197e-54 | -8.615850e-47 |
| Msa0773310 | Msa0821800 | 0.816813 | 4.557381e-52 | -8.615850e-47 |
| Msa0773310 | Msa0827470 | 0.829502 | 4.967777e-55 | -8.615850e-47 |
| Msa0773310 | Msa0828660 | 0.809621 | 1.728689e-50 | -8.615850e-47 |
| Msa0773310 | Msa0831850 | 0.810449 | 1.146459e-50 | -8.615850e-47 |
| Msa0773310 | Msa0832090 | 0.817001 | 4.136053e-52 | -8.615850e-47 |
| Msa0773310 | Msa0834440 | 0.847933 | 8.452936e-60 | -8.615850e-47 |
| Msa0773310 | Msa0836650 | 0.802348 | 5.854752e-49 | -8.615850e-47 |
| Msa0773310 | Msa0838930 | 0.835195 | 1.932259e-56 | -8.615850e-47 |
| Msa0773310 | Msa0845070 | 0.835365 | 1.751135e-56 | -8.615850e-47 |
| Msa0773310 | Msa0845560 | 0.803869 | 2.836639e-49 | -8.615850e-47 |
| Msa0773310 | Msa0847880 | 0.811924 | 5.487522e-51 | -8.615850e-47 |
| Msa0773310 | Msa0861830 | 0.816797 | 4.594595e-52 | -8.615850e-47 |
| Msa0773310 | Msa0874630 | 0.860711 | 1.707362e-63 | -8.615850e-47 |
| Msa0773310 | Msa0881160 | 0.806891 | 6.598137e-50 | -8.615850e-47 |
| Msa0773310 | Msa0892570 | 0.807677 | 4.496976e-50 | -8.615850e-47 |
| Msa0773310 | Msa0902710 | 0.825768 | 3.914402e-54 | -8.615850e-47 |
| Msa0773310 | Msa0921570 | 0.800819 | 1.205099e-48 | -8.615850e-47 |
| Msa0773310 | Msa0930820 | 0.804872 | 1.753552e-49 | -8.615850e-47 |
| Msa0773310 | Msa0939120 | 0.841727 | 3.987143e-58 | -8.615850e-47 |
| Msa0773310 | Msa0960740 | 0.805819 | 1.110354e-49 | -8.615850e-47 |
| Msa0773310 | Msa0968150 | 0.812025 | 5.217124e-51 | -8.615850e-47 |
| Msa0773310 | Msa0974630 | 0.801642 | 8.176090e-49 | -8.615850e-47 |
| Msa0773310 | Msa0975940 | 0.806645 | 7.437794e-50 | -8.615850e-47 |
| Msa0773310 | Msa0994740 | 0.838380 | 2.976786e-57 | -8.615850e-47 |
| Msa0773310 | Msa1006850 | 0.831567 | 1.551288e-55 | -8.615850e-47 |
| Msa0773310 | Msa1008750 | 0.807730 | 4.382963e-50 | -8.615850e-47 |
| Msa0773310 | Msa1014010 | 0.808349 | 3.235946e-50 | -8.615850e-47 |
| Msa0773310 | Msa1021510 | 0.841640 | 4.203793e-58 | -8.615850e-47 |
| Msa0773310 | Msa1026410 | 0.801630 | 8.223402e-49 | -8.615850e-47 |
| Msa0773310 | Msa1031820 | 0.827086 | 1.899668e-54 | -8.615850e-47 |
| Msa0773310 | Msa1050740 | 0.847101 | 1.431020e-59 | -8.615850e-47 |
| Msa0773310 | Msa1070840 | 0.805955 | 1.039609e-49 | -8.615850e-47 |
| Msa0773310 | Msa1077340 | 0.820461 | 6.776574e-53 | -8.615850e-47 |
| Msa0773310 | Msa1080960 | 0.814539 | 1.463425e-51 | -8.615850e-47 |
| Msa0773310 | Msa1084260 | 0.806992 | 6.283365e-50 | -8.615850e-47 |
| Msa0773310 | Msa1093480 | 0.831380 | 1.725265e-55 | -8.615850e-47 |
| Msa0773310 | Msa1098250 | 0.801756 | 7.749175e-49 | -8.615850e-47 |
| Msa0773310 | Msa1098270 | 0.824967 | 6.058373e-54 | -8.615850e-47 |
| Msa0773310 | Msa1105190 | 0.814879 | 1.230202e-51 | -8.615850e-47 |
| Msa0773310 | Msa1105500 | 0.832398 | 9.670913e-56 | -8.615850e-47 |
| Msa0773310 | Msa1114180 | 0.824123 | 9.574123e-54 | -8.615850e-47 |
| Msa0773310 | Msa1115280 | 0.845342 | 4.310612e-59 | -8.615850e-47 |
| Msa0773310 | Msa1118760 | 0.834535 | 2.834207e-56 | -8.615850e-47 |
| Msa0773310 | Msa1133220 | 0.800421 | 1.452719e-48 | -8.615850e-47 |
| Msa0773310 | Msa1133570 | 0.827312 | 1.677394e-54 | -8.615850e-47 |
| Msa0773310 | Msa1135880 | 0.830687 | 2.552438e-55 | -8.615850e-47 |
| Msa0773310 | Msa1143020 | 0.810909 | 9.119415e-51 | -8.615850e-47 |
| Msa0773310 | Msa1144720 | -0.810725 | 9.994389e-51 | -8.615850e-47 |
| Msa0773310 | Msa1158660 | 0.820223 | 7.684051e-53 | -8.615850e-47 |
| Msa0773310 | Msa1164020 | 0.814668 | 1.370232e-51 | -8.615850e-47 |
| Msa0773310 | Msa1168690 | 0.800799 | 1.216244e-48 | -8.615850e-47 |
| Msa0773310 | Msa1174310 | 0.804438 | 2.160084e-49 | -8.615850e-47 |
| Msa0773310 | Msa1177780 | 0.803994 | 2.672332e-49 | -8.615850e-47 |
| Msa0773310 | Msa1182130 | 0.836975 | 6.826171e-57 | -8.615850e-47 |
| Msa0773310 | Msa1205390 | 0.834419 | 3.030627e-56 | -8.615850e-47 |
| Msa0773310 | Msa1222280 | 0.821679 | 3.552108e-53 | -8.615850e-47 |
| Msa0773310 | Msa1227330 | 0.808592 | 2.871630e-50 | -8.615850e-47 |
| Msa0773310 | Msa1229600 | 0.801438 | 9.003744e-49 | -8.615850e-47 |
| Msa0773310 | Msa1229610 | 0.803419 | 3.517435e-49 | -8.615850e-47 |
| Msa0773310 | Msa1235390 | 0.811625 | 6.375542e-51 | -8.615850e-47 |
| Msa0773310 | Msa1241570 | 0.802669 | 5.026962e-49 | -8.615850e-47 |
| Msa0773310 | Msa1247030 | 0.819650 | 1.038964e-52 | -8.615850e-47 |
| Msa0773310 | Msa1250310 | 0.803999 | 2.666699e-49 | -8.615850e-47 |
| Msa0773310 | Msa1273120 | 0.805699 | 1.176922e-49 | -8.615850e-47 |
| Msa0773310 | Msa1276340 | 0.804550 | 2.046781e-49 | -8.615850e-47 |
| Msa0773310 | Msa1287650 | 0.810267 | 1.254913e-50 | -8.615850e-47 |
| Msa0773310 | Msa1287680 | 0.820064 | 8.356522e-53 | -8.615850e-47 |
| Msa0773310 | Msa1288340 | 0.801330 | 9.476618e-49 | -8.615850e-47 |
| Msa0773310 | Msa1288450 | 0.828797 | 7.361219e-55 | -8.615850e-47 |
| Msa0773310 | Msa1297310 | 0.843815 | 1.110935e-58 | -8.615850e-47 |
| Msa0773310 | Msa1299070 | 0.804406 | 2.194105e-49 | -8.615850e-47 |
| Msa0773310 | Msa1305350 | 0.807290 | 5.433019e-50 | -8.615850e-47 |
| Msa0773310 | Msa1307550 | 0.844441 | 7.544116e-59 | -8.615850e-47 |
| Msa0773310 | Msa1311250 | 0.812116 | 4.983382e-51 | -8.615850e-47 |
| Msa0773310 | Msa1311340 | 0.801562 | 8.491763e-49 | -8.615850e-47 |
| Msa0773310 | Msa1314770 | 0.811340 | 7.352830e-51 | -8.615850e-47 |
| Msa0773310 | Msa1319820 | 0.826734 | 2.305503e-54 | -8.615850e-47 |
| Msa0773310 | Msa1333730 | 0.800720 | 1.262412e-48 | -8.615850e-47 |
| Msa0773310 | Msa1335710 | 0.819362 | 1.208653e-52 | -8.615850e-47 |
| Msa0773310 | Msa1349450 | 0.810509 | 1.112773e-50 | -8.615850e-47 |
| Msa0773310 | Msa1352540 | -0.835224 | 1.900125e-56 | -8.615850e-47 |
| Msa0773310 | Msa1360200 | 0.805936 | 1.049481e-49 | -8.615850e-47 |
| Msa0773310 | Msa1360240 | 0.815395 | 9.451753e-52 | -8.615850e-47 |
| Msa0773310 | Msa1366300 | 0.830050 | 3.653240e-55 | -8.615850e-47 |
| Msa0773310 | Msa1371310 | 0.801068 | 1.071707e-48 | -8.615850e-47 |
| Msa0773310 | Msa1371940 | 0.802562 | 5.289161e-49 | -8.615850e-47 |
| Msa0773310 | Msa1372150 | 0.843132 | 1.690478e-58 | -8.615850e-47 |
| Msa0773310 | Msa1373350 | 0.825753 | 3.946856e-54 | -8.615850e-47 |
| Msa0773310 | Msa1376890 | 0.807096 | 5.973874e-50 | -8.615850e-47 |
| Msa0773310 | Msa1379850 | 0.859726 | 3.387418e-63 | -8.615850e-47 |
| Msa0773310 | Msa1385020 | 0.842166 | 3.051817e-58 | -8.615850e-47 |
| Msa0773310 | Msa1393410 | 0.804724 | 1.882908e-49 | -8.615850e-47 |
| Msa0773310 | Msa1397260 | 0.846643 | 1.909826e-59 | -8.615850e-47 |
| Msa0773310 | Msa1400070 | 0.822252 | 2.616683e-53 | -8.615850e-47 |
| Msa0773310 | Msa1401140 | 0.845753 | 3.335718e-59 | -8.615850e-47 |
| Msa0773310 | Msa1407650 | 0.855246 | 7.176072e-62 | -8.615850e-47 |
| Msa0773310 | Msa1424630 | 0.800420 | 1.453148e-48 | -8.615850e-47 |
| Msa0773310 | Msa1433220 | 0.855716 | 5.233369e-62 | -8.615850e-47 |
| Msa0773310 | Msa1435400 | 0.833742 | 4.478191e-56 | -8.615850e-47 |
| Msa0773310 | Msa1435420 | 0.805596 | 1.236568e-49 | -8.615850e-47 |
| Msa0773310 | Msa1440940 | 0.822626 | 2.142155e-53 | -8.615850e-47 |
| Msa0773310 | Msa1445220 | 0.821691 | 3.529553e-53 | -8.615850e-47 |
| Msa0773310 | Msa1451620 | -0.809443 | 1.887935e-50 | -8.615850e-47 |
| Msa0124550 | Msa0773310 | 0.854536 | 1.153465e-61 | -8.615850e-47 |
| Msa0125050 | Msa0773310 | 0.800351 | 1.501302e-48 | -8.615850e-47 |
| Msa0130520 | Msa0773310 | 0.803732 | 3.029101e-49 | -8.615850e-47 |
| Msa0139700 | Msa0773310 | 0.822644 | 2.121558e-53 | -8.615850e-47 |
| Msa0144790 | Msa0773310 | 0.815758 | 7.845205e-52 | -8.615850e-47 |
| Msa0169820 | Msa0773310 | 0.843605 | 1.264624e-58 | -8.615850e-47 |
| Msa0170140 | Msa0773310 | 0.824516 | 7.738700e-54 | -8.615850e-47 |
| Msa0175050 | Msa0773310 | 0.816639 | 4.986230e-52 | -8.615850e-47 |
| Msa0178510 | Msa0773310 | 0.849731 | 2.679288e-60 | -8.615850e-47 |
| Msa0183010 | Msa0773310 | -0.816349 | 5.790200e-52 | -8.615850e-47 |
| Msa0184190 | Msa0773310 | 0.820826 | 5.586060e-53 | -8.615850e-47 |
| Msa0187030 | Msa0773310 | 0.812793 | 3.545990e-51 | -8.615850e-47 |
| Msa0187830 | Msa0773310 | 0.805201 | 1.496797e-49 | -8.615850e-47 |
| Msa0188050 | Msa0773310 | 0.847584 | 1.054204e-59 | -8.615850e-47 |
| Msa0190530 | Msa0773310 | 0.810437 | 1.153465e-50 | -8.615850e-47 |
| Msa0193540 | Msa0773310 | 0.801262 | 9.781393e-49 | -8.615850e-47 |
| Msa0195330 | Msa0773310 | 0.801248 | 9.848384e-49 | -8.615850e-47 |
| Msa0195710 | Msa0773310 | 0.801089 | 1.061588e-48 | -8.615850e-47 |
| Msa0200560 | Msa0773310 | 0.809247 | 2.079036e-50 | -8.615850e-47 |
| Msa0202930 | Msa0773310 | 0.809996 | 1.435449e-50 | -8.615850e-47 |
| Msa0206790 | Msa0773310 | 0.801413 | 9.111026e-49 | -8.615850e-47 |
| Msa0226180 | Msa0773310 | 0.811801 | 5.836098e-51 | -8.615850e-47 |
| Msa0365490 | Msa0773310 | 0.821608 | 3.689338e-53 | -8.615850e-47 |
| Msa0377440 | Msa0773310 | 0.815586 | 8.571314e-52 | -8.615850e-47 |
| Msa0388030 | Msa0773310 | -0.832304 | 1.020607e-55 | -8.615850e-47 |
| Msa0388220 | Msa0773310 | 0.804000 | 2.664932e-49 | -8.615850e-47 |
| Msa0422180 | Msa0773310 | 0.812857 | 3.432975e-51 | -8.615850e-47 |
| Msa0422500 | Msa0773310 | 0.802823 | 4.671527e-49 | -8.615850e-47 |
| Msa0429090 | Msa0773310 | 0.819584 | 1.075844e-52 | -8.615850e-47 |
| Msa0435150 | Msa0773310 | 0.802198 | 6.285184e-49 | -8.615850e-47 |
| Msa0436370 | Msa0773310 | 0.862060 | 6.622623e-64 | -8.615850e-47 |
| Msa0445280 | Msa0773310 | 0.805446 | 1.329844e-49 | -8.615850e-47 |
| Msa0450350 | Msa0773310 | 0.812425 | 4.267491e-51 | -8.615850e-47 |
| Msa0458440 | Msa0773310 | 0.811310 | 7.463328e-51 | -8.615850e-47 |
| Msa0469940 | Msa0773310 | -0.805468 | 1.315887e-49 | -8.615850e-47 |
| Msa0475500 | Msa0773310 | 0.806094 | 9.721327e-50 | -8.615850e-47 |
| Msa0239690 | Msa0773310 | 0.844108 | 9.269096e-59 | -8.615850e-47 |
| Msa0244140 | Msa0773310 | 0.803002 | 4.291373e-49 | -8.615850e-47 |
| Msa0244190 | Msa0773310 | 0.807343 | 5.295655e-50 | -8.615850e-47 |
| Msa0266240 | Msa0773310 | 0.836906 | 7.110647e-57 | -8.615850e-47 |
| Msa0269520 | Msa0773310 | 0.819204 | 1.313127e-52 | -8.615850e-47 |
| Msa0278900 | Msa0773310 | 0.846511 | 2.074765e-59 | -8.615850e-47 |
| Msa0287700 | Msa0773310 | 0.807100 | 5.961052e-50 | -8.615850e-47 |
| Msa0308460 | Msa0773310 | 0.804744 | 1.864754e-49 | -8.615850e-47 |
| Msa0320800 | Msa0773310 | 0.800732 | 1.255335e-48 | -8.615850e-47 |
| Msa0322680 | Msa0773310 | 0.811101 | 8.283678e-51 | -8.615850e-47 |
| Msa0342070 | Msa0773310 | 0.858836 | 6.266532e-63 | -8.615850e-47 |
| Msa0344690 | Msa0773310 | -0.805878 | 1.079001e-49 | -8.615850e-47 |
| Msa0350840 | Msa0773310 | 0.807144 | 5.834696e-50 | -8.615850e-47 |
| Msa0485490 | Msa0773310 | 0.801156 | 1.028433e-48 | -8.615850e-47 |
| Msa0517650 | Msa0773310 | 0.805329 | 1.406880e-49 | -8.615850e-47 |
| Msa0518380 | Msa0773310 | 0.801824 | 7.503239e-49 | -8.615850e-47 |
| Msa0525610 | Msa0773310 | 0.802060 | 6.709357e-49 | -8.615850e-47 |
| Msa0530650 | Msa0773310 | 0.844066 | 9.513743e-59 | -8.615850e-47 |
| Msa0557050 | Msa0773310 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0559500 | Msa0773310 | 0.809209 | 2.119223e-50 | -8.615850e-47 |
| Msa0572420 | Msa0773310 | 0.809564 | 1.777837e-50 | -8.615850e-47 |
| Msa0572480 | Msa0773310 | 0.849015 | 4.241234e-60 | -8.615850e-47 |
| Msa0573040 | Msa0773310 | 0.821865 | 3.217428e-53 | -8.615850e-47 |
| Msa0587190 | Msa0773310 | 0.838117 | 3.479770e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773310 | MtrunA17_Chr5g0427021 | 95.876 | 194 | 1 | 2 | 1 | 193 | 1 | 188 | 5.79e-133 | 370 |
| Msa0773310 | MtrunA17_Chr7g0231881 | 46.970 | 66 | 33 | 1 | 14 | 79 | 5 | 68 | 8.64e-14 | 65.1 |
| Msa0773310 | MtrunA17_Chr8g0334651 | 45.614 | 57 | 31 | 0 | 17 | 73 | 8 | 64 | 6.15e-13 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773310 | AT1G02070.1 | 55.102 | 49 | 21 | 1 | 17 | 64 | 5 | 53 | 1.23e-11 | 60.1 |
Find 39 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTTCTGATGGTGATTT+TGG | 0.180402 | 5_2:+48186294 | None:intergenic |
| TTTGGTTTCTTCATTGGTTT+TGG | 0.200009 | 5_2:+48186312 | None:intergenic |
| GATGAAGAATTTGAAGAGTT+TGG | 0.223033 | 5_2:+48186447 | None:intergenic |
| TACTATATATTGAAATAAAA+AGG | 0.257168 | 5_2:+48186011 | None:intergenic |
| TTGCACGTTAAAATGACATT+AGG | 0.278421 | 5_2:+48185902 | None:intergenic |
| ACCTGTGTTGAGATCGGATT+TGG | 0.307776 | 5_2:+48186922 | None:intergenic |
| CAACTTAATGAAGTTATGTT+TGG | 0.318699 | 5_2:-48185749 | Msa0773310:three_prime_UTR |
| CATTGAGAGGTGAGAGGGAG+AGG | 0.322912 | 5_2:+48187069 | None:intergenic |
| CTTATTCCTGAAAACTTGTT+TGG | 0.327849 | 5_2:+48186128 | None:intergenic |
| TTAGTTATGTACATTGCATT+AGG | 0.341687 | 5_2:+48185967 | None:intergenic |
| AAAAGTAGTAATAATAATAT+TGG | 0.354978 | 5_2:-48186156 | Msa0773310:CDS |
| CGAGTTGAAACTAAAATAGA+TGG | 0.362041 | 5_2:+48186246 | None:intergenic |
| TGCACGTTAAAATGACATTA+GGG | 0.362405 | 5_2:+48185903 | None:intergenic |
| CACATGCAACACTCTGTCTT+TGG | 0.364915 | 5_2:+48186990 | None:intergenic |
| TGTTGCATGTGTGGGGATCT+TGG | 0.374832 | 5_2:-48186978 | Msa0773310:CDS |
| AATCATCACAAACGGTGCTT+TGG | 0.403206 | 5_2:-48186217 | Msa0773310:CDS |
| ATTGAGAGGTGAGAGGGAGA+GGG | 0.479847 | 5_2:+48187070 | None:intergenic |
| CGCAAAAGAATCATCACAAA+CGG | 0.503705 | 5_2:-48186225 | Msa0773310:CDS |
| CAGAAGAAAGGAGTAATCAA+AGG | 0.511163 | 5_2:-48186360 | Msa0773310:CDS |
| TTAAATACCTGTGTTGAGAT+CGG | 0.514874 | 5_2:+48186916 | None:intergenic |
| AGCTATTAGGACTGAATTGA+CGG | 0.515966 | 5_2:-48185783 | Msa0773310:three_prime_UTR |
| GCAACAAGGAAAATTAGAAT+CGG | 0.525386 | 5_2:-48185883 | Msa0773310:three_prime_UTR |
| TTAATGAAGTTATGTTTGGA+TGG | 0.537344 | 5_2:-48185745 | Msa0773310:three_prime_UTR |
| GGAGATGTTGATGATGCTAT+TGG | 0.539445 | 5_2:+48186267 | None:intergenic |
| AAAGGAGTAATCAAAGGAAG+TGG | 0.542816 | 5_2:-48186354 | Msa0773310:CDS |
| TTGAAGATAGATGAAGAACT+AGG | 0.558656 | 5_2:+48187109 | None:intergenic |
| AATGAAAGCACAGAAGATGA+AGG | 0.559578 | 5_2:-48186411 | Msa0773310:CDS |
| AGTCTATATCTTGTTTAACT+CGG | 0.560190 | 5_2:-48187186 | Msa0773310:five_prime_UTR |
| TTGAGTACTCAATGAGGTTG+TGG | 0.572693 | 5_2:-48185851 | Msa0773310:three_prime_UTR |
| CAGCAAAACATGACAAGCAA+AGG | 0.581246 | 5_2:-48187035 | Msa0773310:exon |
| AAGACAGAGTGTTGCATGTG+TGG | 0.591608 | 5_2:-48186987 | Msa0773310:CDS |
| GATAGATGAAGAACTAGGAG+AGG | 0.593712 | 5_2:+48187114 | None:intergenic |
| GTGCTTTGGAAGAGAAGTTG+AGG | 0.598720 | 5_2:-48186203 | Msa0773310:CDS |
| AGACAGAGTGTTGCATGTGT+GGG | 0.608298 | 5_2:-48186986 | Msa0773310:CDS |
| GCCAAATCCGATCTCAACAC+AGG | 0.610494 | 5_2:-48186923 | Msa0773310:intron |
| GTACTCAATGAGGTTGTGGT+AGG | 0.617424 | 5_2:-48185847 | Msa0773310:three_prime_UTR |
| TTGGTGTTTGAGTCAGAACG+AGG | 0.661090 | 5_2:-48186475 | Msa0773310:CDS |
| GACAGAGTGTTGCATGTGTG+GGG | 0.680628 | 5_2:-48186985 | Msa0773310:CDS |
| TGTTGATTGAGTACTCAATG+AGG | 0.683702 | 5_2:-48185857 | Msa0773310:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATTAAAAAAAAGATTAA+GGG | + | chr5_2:48185956-48185975 | None:intergenic | 10.0% |
| !! | TTTCATTAAAAAAAAGATTA+AGG | + | chr5_2:48185957-48185976 | None:intergenic | 10.0% |
| !!! | AATATAATTTTTTTGTTATC+TGG | - | chr5_2:48186233-48186252 | Msa0773310:CDS | 10.0% |
| !! | AAAAGTAGTAATAATAATAT+TGG | - | chr5_2:48186670-48186689 | Msa0773310:intron | 10.0% |
| !! | TACTATATATTGAAATAAAA+AGG | + | chr5_2:48186818-48186837 | None:intergenic | 10.0% |
| !!! | AATATATAGTATTTTGTTTT+TGG | - | chr5_2:48186827-48186846 | Msa0773310:intron | 10.0% |
| !! | AATTATAAAAAGTTTATTTG+CGG | - | chr5_2:48187166-48187185 | Msa0773310:five_prime_UTR | 10.0% |
| !! | TTCATTAAAAAAAAGATTAA+GGG | + | chr5_2:48185956-48185975 | None:intergenic | 10.0% |
| !! | TTTCATTAAAAAAAAGATTA+AGG | + | chr5_2:48185957-48185976 | None:intergenic | 10.0% |
| !!! | AATATAATTTTTTTGTTATC+TGG | - | chr5_2:48186233-48186252 | Msa0773310:CDS | 10.0% |
| !! | AAAAGTAGTAATAATAATAT+TGG | - | chr5_2:48186670-48186689 | Msa0773310:intron | 10.0% |
| !! | TACTATATATTGAAATAAAA+AGG | + | chr5_2:48186818-48186837 | None:intergenic | 10.0% |
| !!! | AATATATAGTATTTTGTTTT+TGG | - | chr5_2:48186827-48186846 | Msa0773310:intron | 10.0% |
| !! | TATTGTATTTAAATTTAGTG+AGG | - | chr5_2:48186170-48186189 | Msa0773310:CDS | 15.0% |
| !! | AAACAAAAAAAGAAAAGAAA+AGG | - | chr5_2:48186783-48186802 | Msa0773310:intron | 15.0% |
| !! | AACAAAAAAAGAAAAGAAAA+GGG | - | chr5_2:48186784-48186803 | Msa0773310:intron | 15.0% |
| !! | TATTGTATTTAAATTTAGTG+AGG | - | chr5_2:48186170-48186189 | Msa0773310:CDS | 15.0% |
| !! | AAACAAAAAAAGAAAAGAAA+AGG | - | chr5_2:48186783-48186802 | Msa0773310:intron | 15.0% |
| !! | AACAAAAAAAGAAAAGAAAA+GGG | - | chr5_2:48186784-48186803 | Msa0773310:intron | 15.0% |
| !!! | AATTTTTTGGAACATGTAAT+TGG | - | chr5_2:48186332-48186351 | Msa0773310:CDS | 20.0% |
| !!! | AAAAATTGTTTTCAGAAGAA+AGG | - | chr5_2:48186454-48186473 | Msa0773310:CDS | 20.0% |
| !!! | AATTTTTTGGAACATGTAAT+TGG | - | chr5_2:48186332-48186351 | Msa0773310:CDS | 20.0% |
| !!! | AAAAATTGTTTTCAGAAGAA+AGG | - | chr5_2:48186454-48186473 | Msa0773310:CDS | 20.0% |
| !! | AGTCTATATCTTGTTTAACT+CGG | - | chr5_2:48185640-48185659 | Msa0773310:three_prime_UTR | 25.0% |
| !!! | CTCTTTACCTTTTTTATTTG+TGG | - | chr5_2:48185682-48185701 | Msa0773310:three_prime_UTR | 25.0% |
| ! | CTAATGACCACAAATAAAAA+AGG | + | chr5_2:48185692-48185711 | None:intergenic | 25.0% |
| !!! | TGTATCTATTTTTCATTGAG+AGG | + | chr5_2:48185773-48185792 | None:intergenic | 25.0% |
| !!! | GAGTTACATATAGTTTTGAA+AGG | - | chr5_2:48186068-48186087 | Msa0773310:three_prime_UTR | 25.0% |
| !!! | AATTTTTTTGTTATCTGGTG+TGG | - | chr5_2:48186238-48186257 | Msa0773310:CDS | 25.0% |
| !! | CTCTTTCATGAAAATTTTGT+AGG | - | chr5_2:48186281-48186300 | Msa0773310:CDS | 25.0% |
| !!! | TATCCAACAACAGAATTTTT+TGG | - | chr5_2:48186319-48186338 | Msa0773310:CDS | 25.0% |
| ! | TTAGTTATGTACATTGCATT+AGG | + | chr5_2:48186862-48186881 | None:intergenic | 25.0% |
| !! | ATATTTTGTGTGAAGCTATT+AGG | - | chr5_2:48187030-48187049 | Msa0773310:exon | 25.0% |
| ! | CAACTTAATGAAGTTATGTT+TGG | - | chr5_2:48187077-48187096 | Msa0773310:five_prime_UTR | 25.0% |
| ! | TTAATGAAGTTATGTTTGGA+TGG | - | chr5_2:48187081-48187100 | Msa0773310:five_prime_UTR | 25.0% |
| !! | AGTCTATATCTTGTTTAACT+CGG | - | chr5_2:48185640-48185659 | Msa0773310:three_prime_UTR | 25.0% |
| !!! | CTCTTTACCTTTTTTATTTG+TGG | - | chr5_2:48185682-48185701 | Msa0773310:three_prime_UTR | 25.0% |
| ! | CTAATGACCACAAATAAAAA+AGG | + | chr5_2:48185692-48185711 | None:intergenic | 25.0% |
| !!! | TGTATCTATTTTTCATTGAG+AGG | + | chr5_2:48185773-48185792 | None:intergenic | 25.0% |
| !!! | GAGTTACATATAGTTTTGAA+AGG | - | chr5_2:48186068-48186087 | Msa0773310:three_prime_UTR | 25.0% |
| !!! | AATTTTTTTGTTATCTGGTG+TGG | - | chr5_2:48186238-48186257 | Msa0773310:CDS | 25.0% |
| !! | CTCTTTCATGAAAATTTTGT+AGG | - | chr5_2:48186281-48186300 | Msa0773310:CDS | 25.0% |
| !!! | TATCCAACAACAGAATTTTT+TGG | - | chr5_2:48186319-48186338 | Msa0773310:CDS | 25.0% |
| ! | TTAGTTATGTACATTGCATT+AGG | + | chr5_2:48186862-48186881 | None:intergenic | 25.0% |
| !! | ATATTTTGTGTGAAGCTATT+AGG | - | chr5_2:48187030-48187049 | Msa0773310:exon | 25.0% |
| ! | CAACTTAATGAAGTTATGTT+TGG | - | chr5_2:48187077-48187096 | Msa0773310:five_prime_UTR | 25.0% |
| ! | TTAATGAAGTTATGTTTGGA+TGG | - | chr5_2:48187081-48187100 | Msa0773310:five_prime_UTR | 25.0% |
| TTGAAGATAGATGAAGAACT+AGG | + | chr5_2:48185720-48185739 | None:intergenic | 30.0% | |
| ! | AGATTTTGCATAGAAAAAGC+TGG | + | chr5_2:48185883-48185902 | None:intergenic | 30.0% |
| TTAAATACCTGTGTTGAGAT+CGG | + | chr5_2:48185913-48185932 | None:intergenic | 30.0% | |
| GTTCCAAAAAATTCTGTTGT+TGG | + | chr5_2:48186325-48186344 | None:intergenic | 30.0% | |
| GATGAAGAATTTGAAGAGTT+TGG | + | chr5_2:48186382-48186401 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTCTTCATTGGTTT+TGG | + | chr5_2:48186517-48186536 | None:intergenic | 30.0% |
| ! | CGAGTTGAAACTAAAATAGA+TGG | + | chr5_2:48186583-48186602 | None:intergenic | 30.0% |
| ! | CTTATTCCTGAAAACTTGTT+TGG | + | chr5_2:48186701-48186720 | None:intergenic | 30.0% |
| !! | CAAACAAGTTTTCAGGAATA+AGG | - | chr5_2:48186699-48186718 | Msa0773310:intron | 30.0% |
| !! | TTTTCAGGAATAAGGTAAGA+AGG | - | chr5_2:48186707-48186726 | Msa0773310:intron | 30.0% |
| TGCACGTTAAAATGACATTA+GGG | + | chr5_2:48186926-48186945 | None:intergenic | 30.0% | |
| TTGCACGTTAAAATGACATT+AGG | + | chr5_2:48186927-48186946 | None:intergenic | 30.0% | |
| GCAACAAGGAAAATTAGAAT+CGG | - | chr5_2:48186943-48186962 | Msa0773310:CDS | 30.0% | |
| TTGAAGATAGATGAAGAACT+AGG | + | chr5_2:48185720-48185739 | None:intergenic | 30.0% | |
| ! | AGATTTTGCATAGAAAAAGC+TGG | + | chr5_2:48185883-48185902 | None:intergenic | 30.0% |
| TTAAATACCTGTGTTGAGAT+CGG | + | chr5_2:48185913-48185932 | None:intergenic | 30.0% | |
| GTTCCAAAAAATTCTGTTGT+TGG | + | chr5_2:48186325-48186344 | None:intergenic | 30.0% | |
| GATGAAGAATTTGAAGAGTT+TGG | + | chr5_2:48186382-48186401 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTCTTCATTGGTTT+TGG | + | chr5_2:48186517-48186536 | None:intergenic | 30.0% |
| ! | CGAGTTGAAACTAAAATAGA+TGG | + | chr5_2:48186583-48186602 | None:intergenic | 30.0% |
| ! | CTTATTCCTGAAAACTTGTT+TGG | + | chr5_2:48186701-48186720 | None:intergenic | 30.0% |
| !! | CAAACAAGTTTTCAGGAATA+AGG | - | chr5_2:48186699-48186718 | Msa0773310:intron | 30.0% |
| !! | TTTTCAGGAATAAGGTAAGA+AGG | - | chr5_2:48186707-48186726 | Msa0773310:intron | 30.0% |
| TGCACGTTAAAATGACATTA+GGG | + | chr5_2:48186926-48186945 | None:intergenic | 30.0% | |
| TTGCACGTTAAAATGACATT+AGG | + | chr5_2:48186927-48186946 | None:intergenic | 30.0% | |
| GCAACAAGGAAAATTAGAAT+CGG | - | chr5_2:48186943-48186962 | Msa0773310:CDS | 30.0% | |
| !!! | ACTCGGTTTAGTCTTTTTTG+TGG | - | chr5_2:48185657-48185676 | Msa0773310:three_prime_UTR | 35.0% |
| !!! | CTCGGTTTAGTCTTTTTTGT+GGG | - | chr5_2:48185658-48185677 | Msa0773310:three_prime_UTR | 35.0% |
| ! | TTTTTCATTGAGAGGTGAGA+GGG | + | chr5_2:48185765-48185784 | None:intergenic | 35.0% |
| ! | ATTTTTCATTGAGAGGTGAG+AGG | + | chr5_2:48185766-48185785 | None:intergenic | 35.0% |
| ! | AATGAAAGCACAGAAGATGA+AGG | - | chr5_2:48186415-48186434 | Msa0773310:CDS | 35.0% |
| CAGAAGAAAGGAGTAATCAA+AGG | - | chr5_2:48186466-48186485 | Msa0773310:CDS | 35.0% | |
| AAAGGAGTAATCAAAGGAAG+TGG | - | chr5_2:48186472-48186491 | Msa0773310:CDS | 35.0% | |
| !!! | GGTGATTTTGGTTTCTTCAT+TGG | + | chr5_2:48186523-48186542 | None:intergenic | 35.0% |
| !! | TTTGCTTCTGATGGTGATTT+TGG | + | chr5_2:48186535-48186554 | None:intergenic | 35.0% |
| !! | ATTGGTGATTTTGCTTCTGA+TGG | + | chr5_2:48186544-48186563 | None:intergenic | 35.0% |
| CGCAAAAGAATCATCACAAA+CGG | - | chr5_2:48186601-48186620 | Msa0773310:intron | 35.0% | |
| !!! | TGTCATTTTAACGTGCAACA+AGG | - | chr5_2:48186929-48186948 | Msa0773310:CDS | 35.0% |
| ! | TGTTGATTGAGTACTCAATG+AGG | - | chr5_2:48186969-48186988 | Msa0773310:CDS | 35.0% |
| AGCTATTAGGACTGAATTGA+CGG | - | chr5_2:48187043-48187062 | Msa0773310:exon | 35.0% | |
| GTTTGGATGGAAGAGAAAAA+AGG | - | chr5_2:48187094-48187113 | Msa0773310:five_prime_UTR | 35.0% | |
| !!! | ACTCGGTTTAGTCTTTTTTG+TGG | - | chr5_2:48185657-48185676 | Msa0773310:three_prime_UTR | 35.0% |
| !!! | CTCGGTTTAGTCTTTTTTGT+GGG | - | chr5_2:48185658-48185677 | Msa0773310:three_prime_UTR | 35.0% |
| ! | TTTTTCATTGAGAGGTGAGA+GGG | + | chr5_2:48185765-48185784 | None:intergenic | 35.0% |
| ! | ATTTTTCATTGAGAGGTGAG+AGG | + | chr5_2:48185766-48185785 | None:intergenic | 35.0% |
| ! | AATGAAAGCACAGAAGATGA+AGG | - | chr5_2:48186415-48186434 | Msa0773310:CDS | 35.0% |
| CAGAAGAAAGGAGTAATCAA+AGG | - | chr5_2:48186466-48186485 | Msa0773310:CDS | 35.0% | |
| AAAGGAGTAATCAAAGGAAG+TGG | - | chr5_2:48186472-48186491 | Msa0773310:CDS | 35.0% | |
| !!! | GGTGATTTTGGTTTCTTCAT+TGG | + | chr5_2:48186523-48186542 | None:intergenic | 35.0% |
| !! | TTTGCTTCTGATGGTGATTT+TGG | + | chr5_2:48186535-48186554 | None:intergenic | 35.0% |
| !! | ATTGGTGATTTTGCTTCTGA+TGG | + | chr5_2:48186544-48186563 | None:intergenic | 35.0% |
| CGCAAAAGAATCATCACAAA+CGG | - | chr5_2:48186601-48186620 | Msa0773310:intron | 35.0% | |
| !!! | TGTCATTTTAACGTGCAACA+AGG | - | chr5_2:48186929-48186948 | Msa0773310:CDS | 35.0% |
| ! | TGTTGATTGAGTACTCAATG+AGG | - | chr5_2:48186969-48186988 | Msa0773310:CDS | 35.0% |
| AGCTATTAGGACTGAATTGA+CGG | - | chr5_2:48187043-48187062 | Msa0773310:exon | 35.0% | |
| GTTTGGATGGAAGAGAAAAA+AGG | - | chr5_2:48187094-48187113 | Msa0773310:five_prime_UTR | 35.0% | |
| GATAGATGAAGAACTAGGAG+AGG | + | chr5_2:48185715-48185734 | None:intergenic | 40.0% | |
| CAGCAAAACATGACAAGCAA+AGG | - | chr5_2:48185791-48185810 | Msa0773310:three_prime_UTR | 40.0% | |
| TTGTTATCTGGTGTGGTCTT+TGG | - | chr5_2:48186245-48186264 | Msa0773310:CDS | 40.0% | |
| !! | GGAGATGTTGATGATGCTAT+TGG | + | chr5_2:48186562-48186581 | None:intergenic | 40.0% |
| AATCATCACAAACGGTGCTT+TGG | - | chr5_2:48186609-48186628 | Msa0773310:intron | 40.0% | |
| ! | GTGTGACCAAACAAGTTTTC+AGG | - | chr5_2:48186692-48186711 | Msa0773310:intron | 40.0% |
| TTGAGTACTCAATGAGGTTG+TGG | - | chr5_2:48186975-48186994 | Msa0773310:CDS | 40.0% | |
| GGATGGAAGAGAAAAAAGGA+CGG | - | chr5_2:48187098-48187117 | Msa0773310:five_prime_UTR | 40.0% | |
| GATAGATGAAGAACTAGGAG+AGG | + | chr5_2:48185715-48185734 | None:intergenic | 40.0% | |
| CAGCAAAACATGACAAGCAA+AGG | - | chr5_2:48185791-48185810 | Msa0773310:three_prime_UTR | 40.0% | |
| TTGTTATCTGGTGTGGTCTT+TGG | - | chr5_2:48186245-48186264 | Msa0773310:CDS | 40.0% | |
| !! | GGAGATGTTGATGATGCTAT+TGG | + | chr5_2:48186562-48186581 | None:intergenic | 40.0% |
| AATCATCACAAACGGTGCTT+TGG | - | chr5_2:48186609-48186628 | Msa0773310:intron | 40.0% | |
| ! | GTGTGACCAAACAAGTTTTC+AGG | - | chr5_2:48186692-48186711 | Msa0773310:intron | 40.0% |
| TTGAGTACTCAATGAGGTTG+TGG | - | chr5_2:48186975-48186994 | Msa0773310:CDS | 40.0% | |
| GGATGGAAGAGAAAAAAGGA+CGG | - | chr5_2:48187098-48187117 | Msa0773310:five_prime_UTR | 40.0% | |
| CACATGCAACACTCTGTCTT+TGG | + | chr5_2:48185839-48185858 | None:intergenic | 45.0% | |
| !! | AAGACAGAGTGTTGCATGTG+TGG | - | chr5_2:48185839-48185858 | Msa0773310:three_prime_UTR | 45.0% |
| !! | AGACAGAGTGTTGCATGTGT+GGG | - | chr5_2:48185840-48185859 | Msa0773310:three_prime_UTR | 45.0% |
| ACCTGTGTTGAGATCGGATT+TGG | + | chr5_2:48185907-48185926 | None:intergenic | 45.0% | |
| ! | TTGGTGTTTGAGTCAGAACG+AGG | - | chr5_2:48186351-48186370 | Msa0773310:CDS | 45.0% |
| !! | GTGCTTTGGAAGAGAAGTTG+AGG | - | chr5_2:48186623-48186642 | Msa0773310:intron | 45.0% |
| GTACTCAATGAGGTTGTGGT+AGG | - | chr5_2:48186979-48186998 | Msa0773310:CDS | 45.0% | |
| CACATGCAACACTCTGTCTT+TGG | + | chr5_2:48185839-48185858 | None:intergenic | 45.0% | |
| !! | AAGACAGAGTGTTGCATGTG+TGG | - | chr5_2:48185839-48185858 | Msa0773310:three_prime_UTR | 45.0% |
| !! | AGACAGAGTGTTGCATGTGT+GGG | - | chr5_2:48185840-48185859 | Msa0773310:three_prime_UTR | 45.0% |
| ACCTGTGTTGAGATCGGATT+TGG | + | chr5_2:48185907-48185926 | None:intergenic | 45.0% | |
| ! | TTGGTGTTTGAGTCAGAACG+AGG | - | chr5_2:48186351-48186370 | Msa0773310:CDS | 45.0% |
| !! | GTGCTTTGGAAGAGAAGTTG+AGG | - | chr5_2:48186623-48186642 | Msa0773310:intron | 45.0% |
| GTACTCAATGAGGTTGTGGT+AGG | - | chr5_2:48186979-48186998 | Msa0773310:CDS | 45.0% | |
| !!! | ATAAATTTTATATTTTTGTA+AGG | - | chr5_2:48186114-48186133 | Msa0773310:CDS | 5.0% |
| !!! | ATAAATTTTATATTTTTGTA+AGG | - | chr5_2:48186114-48186133 | Msa0773310:CDS | 5.0% |
| ATTGAGAGGTGAGAGGGAGA+GGG | + | chr5_2:48185759-48185778 | None:intergenic | 50.0% | |
| !! | GACAGAGTGTTGCATGTGTG+GGG | - | chr5_2:48185841-48185860 | Msa0773310:three_prime_UTR | 50.0% |
| TGTTGCATGTGTGGGGATCT+TGG | - | chr5_2:48185848-48185867 | Msa0773310:three_prime_UTR | 50.0% | |
| GCCAAATCCGATCTCAACAC+AGG | - | chr5_2:48185903-48185922 | Msa0773310:three_prime_UTR | 50.0% | |
| ATTGAGAGGTGAGAGGGAGA+GGG | + | chr5_2:48185759-48185778 | None:intergenic | 50.0% | |
| !! | GACAGAGTGTTGCATGTGTG+GGG | - | chr5_2:48185841-48185860 | Msa0773310:three_prime_UTR | 50.0% |
| TGTTGCATGTGTGGGGATCT+TGG | - | chr5_2:48185848-48185867 | Msa0773310:three_prime_UTR | 50.0% | |
| GCCAAATCCGATCTCAACAC+AGG | - | chr5_2:48185903-48185922 | Msa0773310:three_prime_UTR | 50.0% | |
| CATTGAGAGGTGAGAGGGAG+AGG | + | chr5_2:48185760-48185779 | None:intergenic | 55.0% | |
| CATTGAGAGGTGAGAGGGAG+AGG | + | chr5_2:48185760-48185779 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 48185628 | 48187220 | 48185628 | ID=Msa0773310;Name=Msa0773310 |
| chr5_2 | mRNA | 48185628 | 48187220 | 48185628 | ID=Msa0773310-mRNA-1;Parent=Msa0773310;Name=Msa0773310-mRNA-1;_AED=0.01;_eAED=0.01;_QI=172|1|1|1|1|1|2|461|193 |
| chr5_2 | exon | 48185628 | 48186545 | 48185628 | ID=Msa0773310-mRNA-1:exon:14403;Parent=Msa0773310-mRNA-1 |
| chr5_2 | exon | 48186924 | 48187220 | 48186924 | ID=Msa0773310-mRNA-1:exon:14402;Parent=Msa0773310-mRNA-1 |
| chr5_2 | five_prime_UTR | 48187049 | 48187220 | 48187049 | ID=Msa0773310-mRNA-1:five_prime_utr;Parent=Msa0773310-mRNA-1 |
| chr5_2 | CDS | 48186924 | 48187048 | 48186924 | ID=Msa0773310-mRNA-1:cds;Parent=Msa0773310-mRNA-1 |
| chr5_2 | CDS | 48186089 | 48186545 | 48186089 | ID=Msa0773310-mRNA-1:cds;Parent=Msa0773310-mRNA-1 |
| chr5_2 | three_prime_UTR | 48185628 | 48186088 | 48185628 | ID=Msa0773310-mRNA-1:three_prime_utr;Parent=Msa0773310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
