AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0827150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827150 MtrunA17_Chr1g0213121 98.110 529 10 0 1 529 842 1370 0.0 1068
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827150 AT5G13590.6 32.710 535 267 24 2 518 722 1181 3.58e-32 132
Msa0827150 AT5G13590.5 32.710 535 267 24 2 518 729 1188 3.83e-32 132
Msa0827150 AT5G13590.1 32.710 535 267 24 2 518 704 1163 3.96e-32 132
Msa0827150 AT5G13590.3 32.710 535 267 24 2 518 704 1163 3.96e-32 132
Msa0827150 AT5G13590.2 32.710 535 267 24 2 518 704 1163 3.96e-32 132
Msa0827150 AT5G13590.4 32.710 535 267 24 2 518 704 1163 3.96e-32 132

Find 380 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTTAGTACTTATTTAT+TGG 0.148497 5_3:+68217332 Msa0827150:three_prime_UTR
TTTGGTGTGCTATTCATTTA+AGG 0.155225 5_3:-68217447 None:intergenic
CAACCCTGCCATTTGTTTAT+AGG 0.167891 5_3:-68217273 None:intergenic
AGAAATTCTAGATTGAATTT+TGG 0.169087 5_3:+68215628 Msa0827150:CDS
TCCATGTTTCTTGTTCTTCT+AGG 0.184922 5_3:-68216837 None:intergenic
GGCAAATCCTGAACTCTTAT+TGG 0.196285 5_3:+68213251 Msa0827150:five_prime_UTR
CTTCTTGGGGACCTCCTTCT+AGG 0.205103 5_3:-68216216 None:intergenic
TGCTATGACTTGGTCAGTTT+TGG 0.223722 5_3:+68217423 Msa0827150:three_prime_UTR
TCCTTCACTTCAAGCTTCTT+TGG 0.234510 5_3:+68212938 Msa0827150:five_prime_UTR
CCTCCTGGTGACCTCCTTCT+TGG 0.240688 5_3:-68215880 None:intergenic
GAAGCCAATGCCCGTCTTCT+AGG 0.249331 5_3:+68214017 Msa0827150:five_prime_UTR
GCAGAAGACTATTCGGATTA+AGG 0.252972 5_3:-68216960 None:intergenic
GGTTCTCCTTTCTCCATATT+GGG 0.260244 5_3:-68213444 None:intergenic
CAGGATTTGCCTTAATTGTT+TGG 0.267301 5_3:-68213239 None:intergenic
CCATCTGGAGATCTTCTTCT+TGG 0.272717 5_3:-68216231 None:intergenic
TGTGGTACTCTCTGCTGTTT+TGG 0.286701 5_3:-68214159 None:intergenic
GAAGGAATCAAACCCTTCTT+TGG 0.286984 5_3:+68213155 Msa0827150:five_prime_UTR
CAGTTTAGTGATTTAGTTGC+AGG 0.293863 5_3:+68212750 Msa0827150:five_prime_UTR
TAAATAAGTACTAAATTATT+AGG 0.296432 5_3:-68217328 None:intergenic
TTCATCGGCAACTTCTTTCT+TGG 0.299088 5_3:-68214492 None:intergenic
GTTTCTAGATATAGCAAGTT+TGG 0.305548 5_3:-68217246 None:intergenic
AGGATTTGCCTTAATTGTTT+GGG 0.311598 5_3:-68213238 None:intergenic
GATCTTCTATGAGTGATTTC+AGG 0.318142 5_3:-68216267 None:intergenic
ATTTAGTTGGGACTTCAGTA+TGG 0.321595 5_3:+68217219 Msa0827150:three_prime_UTR
TGCATTCTAGCAGGGCAAAC+TGG 0.321750 5_3:+68213556 Msa0827150:five_prime_UTR
GCGCCACGGTATTGTTGATT+TGG 0.323386 5_3:-68215733 None:intergenic
TTTGGAAGAGGCTTCGGTTC+AGG 0.324689 5_3:+68212956 Msa0827150:five_prime_UTR
TTCAGGATCCCAAACAATTA+AGG 0.327840 5_3:+68213230 Msa0827150:five_prime_UTR
TTGTTATTACCATTGTTATA+AGG 0.329381 5_3:-68216666 None:intergenic
CTATCAAATGTCAGTATTGC+AGG 0.334431 5_3:+68212888 Msa0827150:five_prime_UTR
AGTAAAACTAGGCCTATTTC+AGG 0.335446 5_3:+68215329 Msa0827150:CDS
AGGGATGAAGTTTACATTGA+TGG 0.338714 5_3:+68215562 Msa0827150:intron
TTTCATTCAATCAATAAATT+CGG 0.339023 5_3:+68211560 Msa0827150:five_prime_UTR
CAAGAGAGTCCTATAGTTCC+TGG 0.339885 5_3:+68213345 Msa0827150:five_prime_UTR
AGGTTCTCCTTTCTCCATAT+TGG 0.340151 5_3:-68213445 None:intergenic
CCTCCAATACATCTACTATT+AGG 0.341848 5_3:-68215952 None:intergenic
CAATAAGATACAACCCAATA+TGG 0.350047 5_3:+68213431 Msa0827150:five_prime_UTR
AGCTTCTTTGGAAGAGGCTT+CGG 0.351485 5_3:+68212950 Msa0827150:five_prime_UTR
TCTGTTAAAACTTCTATTGA+TGG 0.351544 5_3:+68213627 Msa0827150:five_prime_UTR
TTGGTGTGCTATTCATTTAA+GGG 0.353372 5_3:-68217446 None:intergenic
AGAAGATCTCCAGATGGTTT+TGG 0.354830 5_3:+68216237 Msa0827150:CDS
CCTGATGATTCATATGTTAA+TGG 0.355936 5_3:+68215814 Msa0827150:CDS
TTCCCTTGCGAAACATTAAC+TGG 0.356403 5_3:-68215037 None:intergenic
AAGAATAGTTTATTCGATAC+AGG 0.357041 5_3:+68212440 Msa0827150:five_prime_UTR
TCAGGCATGGTGGACAAGTT+TGG 0.357207 5_3:+68216877 Msa0827150:CDS
CTGAACAAGTAAAATTTAGT+TGG 0.361738 5_3:+68217206 Msa0827150:three_prime_UTR
TTTGCAGCCAATAAGAGTTC+AGG 0.362535 5_3:-68213258 None:intergenic
TCTACCAGATGGACTCCTAT+TGG 0.363112 5_3:-68216454 None:intergenic
ATCCATTCCCTCAAATTGTT+GGG 0.366281 5_3:-68216064 None:intergenic
AAAGCTTTCGTTACTTCAAC+TGG 0.366983 5_3:+68213762 Msa0827150:five_prime_UTR
ACTACCGTTAGTAACATCTT+TGG 0.371285 5_3:-68215255 None:intergenic
CATCTGGAGATCTTCTTCTT+GGG 0.375256 5_3:-68216230 None:intergenic
ATGCAAATACTTCTAGTGTT+AGG 0.378253 5_3:+68213946 Msa0827150:five_prime_UTR
TGTTTCTCTTACCTCGCATA+TGG 0.383045 5_3:-68214768 None:intergenic
GGCAGCGATCTGCCTGAAAT+AGG 0.386193 5_3:-68215341 None:intergenic
AAAGATAAAGTAGTACTTCC+AGG 0.386693 5_3:-68213363 None:intergenic
TTTAGACTTATTATTTCAAA+TGG 0.388351 5_3:+68217561 Msa0827150:three_prime_UTR
TCCTCCAGCAGAAGACTATT+CGG 0.388487 5_3:-68216967 None:intergenic
GAATCTGAGCGTGAATATTC+TGG 0.390340 5_3:+68215694 Msa0827150:CDS
ATGAGCAAGAAGATAATTTC+AGG 0.390395 5_3:+68216859 Msa0827150:CDS
GGTGAGGAGAGGAGGAGGTT+TGG 0.393262 5_3:+68216609 Msa0827150:CDS
CATCTACTATTAGGACTAAC+AGG 0.396484 5_3:-68215943 None:intergenic
ATCAGATAACCCGGCAGAAC+TGG 0.396746 5_3:-68213039 None:intergenic
TGTGTTGTGATGTGAGAAAA+AGG 0.399388 5_3:-68211720 None:intergenic
CTTTCTTCGCAGTTGTTTCG+TGG 0.402115 5_3:+68211669 Msa0827150:five_prime_UTR
AAGTTCTCATCATACGGTTC+TGG 0.402426 5_3:-68213978 None:intergenic
CCAGTGAAAACAGGTCGATC+AGG 0.402633 5_3:-68216321 None:intergenic
ATAGCCGAGGTCGTGGTGAC+TGG 0.403031 5_3:+68215671 Msa0827150:CDS
CAGAAGACTATTCGGATTAA+GGG 0.405190 5_3:-68216959 None:intergenic
GGAGGGGATGGTTCAGACTT+AGG 0.409337 5_3:+68215970 Msa0827150:CDS
AAACAGTTTACGTGCTCGAC+TGG 0.410366 5_3:+68213681 Msa0827150:five_prime_UTR
GTAGTACTTCCAGGAACTAT+AGG 0.411692 5_3:-68213354 None:intergenic
CCATCAGTGGCTTGATTGCA+AGG 0.411970 5_3:-68215115 None:intergenic
ATTCTGTCAACCCTGTATAA+TGG 0.412769 5_3:-68216291 None:intergenic
AGTTGCTATTTCTAATCCTA+TGG 0.416946 5_3:+68214436 Msa0827150:five_prime_UTR
TTAGCAGATCCTTCCATCTT+CGG 0.419561 5_3:-68215218 None:intergenic
CACGACCTTCTAATGATATG+AGG 0.420923 5_3:+68216385 Msa0827150:CDS
ATAGAAGATCACCATTATAC+AGG 0.421452 5_3:+68216280 Msa0827150:CDS
AAGGAAATGGTGAGGAGAGG+AGG 0.422893 5_3:+68216601 Msa0827150:CDS
GTATCTGTTAAACTAAATTC+AGG 0.422945 5_3:+68213873 Msa0827150:five_prime_UTR
ATTAACAATGGTGAAGGAAA+TGG 0.423862 5_3:+68216588 Msa0827150:CDS
TTATCATAATTACCTGAGTC+AGG 0.425379 5_3:-68214797 None:intergenic
GAAATGGTGAGGAGAGGAGG+AGG 0.429153 5_3:+68216604 Msa0827150:CDS
TTAGACTTATTATTTCAAAT+GGG 0.429165 5_3:+68217562 Msa0827150:three_prime_UTR
AGCGTTCTTATAGCGAAGAT+TGG 0.429608 5_3:+68212562 Msa0827150:five_prime_UTR
CATCCATTCCCTCAAATTGT+TGG 0.430239 5_3:-68216065 None:intergenic
CGGAACCTGCTCAGAATTTG+AGG 0.431303 5_3:-68214405 None:intergenic
AGTACTAAATTATTAGGAAC+AGG 0.433509 5_3:-68217322 None:intergenic
ACCACCACTCCTTTCTCCAC+TGG 0.435208 5_3:-68214824 None:intergenic
TGAACGACTCCTCGATCTGA+TGG 0.435729 5_3:-68216175 None:intergenic
TGCTATTGCTGATACTGATC+TGG 0.436561 5_3:+68215774 Msa0827150:CDS
TCTAATCCTATGGTTACTCC+TGG 0.438282 5_3:+68214446 Msa0827150:five_prime_UTR
CTCTTATTGGCTGCAAAAGA+TGG 0.438646 5_3:+68213264 Msa0827150:five_prime_UTR
AATGTAGAATCGACATTAGA+TGG 0.438760 5_3:-68214095 None:intergenic
AGGAAGAGATGGCATTCAAA+TGG 0.440656 5_3:+68215903 Msa0827150:CDS
AGTGGGATAAAGTCCTTTGC+TGG 0.441090 5_3:+68212726 Msa0827150:five_prime_UTR
GGGAAAGGGACTTTGATAGA+AGG 0.442842 5_3:+68216787 Msa0827150:CDS
GGGTTTGATTCCTTCCGCTT+CGG 0.443273 5_3:-68213147 None:intergenic
TCATATGTTAATGGTCGGTT+AGG 0.443348 5_3:+68215823 Msa0827150:CDS
CCAGCAGTAGCTGTCGGACT+TGG 0.445295 5_3:-68213921 None:intergenic
ATGCCATCTCTTCCTCCTCC+TGG 0.446471 5_3:-68215895 None:intergenic
ATGTTGGAAGATGATTCTTT+TGG 0.446585 5_3:+68214617 Msa0827150:five_prime_UTR
ATGGCATTCAAATGGGTCAT+AGG 0.447730 5_3:+68215911 Msa0827150:CDS
CGATTATCATTGCTATGACT+TGG 0.449378 5_3:+68217413 Msa0827150:three_prime_UTR
ACTCTCTCCCCAGTGAAAAC+AGG 0.449421 5_3:-68216330 None:intergenic
TTTACTAGGGGATGACGAAC+TGG 0.451311 5_3:-68215312 None:intergenic
ATCATTATCAGATCGATCTC+GGG 0.452747 5_3:-68216514 None:intergenic
CAAGGTCTGTCATTTCCAAT+AGG 0.455806 5_3:+68216439 Msa0827150:CDS
AGTGGAGGGCCTATGCATTC+CGG 0.455841 5_3:+68216552 Msa0827150:CDS
GTCAATGGACATCTCCTAGA+AGG 0.456043 5_3:+68216202 Msa0827150:CDS
GTCTCCTTCACCTCCTCGTA+CGG 0.456230 5_3:+68212812 Msa0827150:five_prime_UTR
TATAAACAAATGGCAGGGTT+GGG 0.456775 5_3:+68217275 Msa0827150:three_prime_UTR
CAAGTCATAGCAATGATAAT+CGG 0.457916 5_3:-68217412 None:intergenic
GTATTTCCTGACACACTTGA+TGG 0.458004 5_3:+68215383 Msa0827150:CDS
TCTTGACTACCCTCATGACT+TGG 0.461485 5_3:-68214131 None:intergenic
TTGTCACCATCAAGTGTGTC+AGG 0.461496 5_3:-68215389 None:intergenic
TGAACAAGTAAAATTTAGTT+GGG 0.461924 5_3:+68217207 Msa0827150:three_prime_UTR
AATAATTGTCTCTGAAACTC+AGG 0.463199 5_3:+68215081 Msa0827150:five_prime_UTR
ATCAAGGGTAGGAATGGAAA+TGG 0.464585 5_3:+68216810 Msa0827150:CDS
AGTCCTAATAGTAGATGTAT+TGG 0.466113 5_3:+68215949 Msa0827150:CDS
TGAAGTGAGGCTAAGGATAG+TGG 0.466383 5_3:+68212373 Msa0827150:five_prime_UTR
TGAGAGAGGCAATAACTTGA+GGG 0.467420 5_3:+68216767 Msa0827150:CDS
GTTTCCGTCTGTTACAAGTT+CGG 0.467750 5_3:+68213404 Msa0827150:five_prime_UTR
ACCCTTTCTACCAGTTCTGC+CGG 0.467930 5_3:+68213029 Msa0827150:five_prime_UTR
ACTTCAAGCTTCTTTGGAAG+AGG 0.468551 5_3:+68212944 Msa0827150:five_prime_UTR
AAAGATAGTTCTAATGAGAC+AGG 0.471095 5_3:-68213465 None:intergenic
CGTCATCCCCTAGTAAAACT+AGG 0.471888 5_3:+68215318 Msa0827150:CDS
CATCATTATCAGATCGATCT+CGG 0.472429 5_3:-68216515 None:intergenic
ACCTCTTCACGGCCTGAGAT+GGG 0.473312 5_3:-68212592 None:intergenic
TTTACAGACACGGCACTTGT+TGG 0.474189 5_3:-68213714 None:intergenic
CTGTTAAAACTTCTATTGAT+GGG 0.474367 5_3:+68213628 Msa0827150:five_prime_UTR
CCCTTTCTACCAGTTCTGCC+GGG 0.475861 5_3:+68213030 Msa0827150:five_prime_UTR
ATTGGAATCATGCCCATCTC+AGG 0.476661 5_3:+68212580 Msa0827150:five_prime_UTR
GGACTTGGCAAACTAACAAT+AGG 0.476939 5_3:-68213906 None:intergenic
GGAGGTACCCTCCTTTGATT+CGG 0.477122 5_3:+68212790 Msa0827150:five_prime_UTR
TCGACATACTTCTGAACAAA+AGG 0.479784 5_3:-68213837 None:intergenic
ACAATGGATGCATGGGATGA+AGG 0.481287 5_3:+68213591 Msa0827150:five_prime_UTR
CTATAAACAAATGGCAGGGT+TGG 0.482298 5_3:+68217274 Msa0827150:three_prime_UTR
GGAGTCGTTCACCCGGTCAA+TGG 0.486073 5_3:+68216187 Msa0827150:CDS
GGATGTCCACCAAAACCATC+TGG 0.486343 5_3:-68216246 None:intergenic
AGAAGGATCAAGGGTAGGAA+TGG 0.486430 5_3:+68216804 Msa0827150:CDS
AGATCGCTGCCAACTCGAGC+TGG 0.486756 5_3:+68215353 Msa0827150:CDS
CACCTCTTCACGGCCTGAGA+TGG 0.487293 5_3:-68212593 None:intergenic
ACCCGGCAGAACTGGTAGAA+AGG 0.488032 5_3:-68213031 None:intergenic
TCCCCAACAATTTGAGGGAA+TGG 0.488319 5_3:+68216062 Msa0827150:CDS
AAACTGAACCTATAAACAAA+TGG 0.489209 5_3:+68217265 Msa0827150:three_prime_UTR
CCCGGCAGAACTGGTAGAAA+GGG 0.491402 5_3:-68213030 None:intergenic
ATTTCCAATAGGAGTCCATC+TGG 0.491818 5_3:+68216450 Msa0827150:CDS
AGTTTCCTCAAATTCTGAGC+AGG 0.492604 5_3:+68214400 Msa0827150:five_prime_UTR
GGACTTTGATAGAAGGATCA+AGG 0.493120 5_3:+68216794 Msa0827150:CDS
TACACGTCCCCAACAATTTG+AGG 0.493340 5_3:+68216056 Msa0827150:CDS
GATAATAAACCAGTGGAGAA+AGG 0.494205 5_3:+68214815 Msa0827150:five_prime_UTR
CTTTATTTGAAGTGAGGCTA+AGG 0.494568 5_3:+68212366 Msa0827150:five_prime_UTR
AACCTTGTCAACTGATATGT+TGG 0.495212 5_3:+68214601 Msa0827150:five_prime_UTR
CTATTCACAACATCCAAAGA+AGG 0.499854 5_3:-68213168 None:intergenic
TCTAGGAGATGTCCATTGAC+CGG 0.502238 5_3:-68216199 None:intergenic
CCATTAACATATGAATCATC+AGG 0.503736 5_3:-68215814 None:intergenic
TGAACCTAGAAGACGGGCAT+TGG 0.505164 5_3:-68214021 None:intergenic
TTCAATTACCGGGTTTCCAA+TGG 0.507775 5_3:-68213063 None:intergenic
GTTACTAACGGTAGTAATCA+AGG 0.509540 5_3:+68215263 Msa0827150:CDS
GCTTAAGCCATTCTAAGTGG+TGG 0.511960 5_3:+68217089 Msa0827150:three_prime_UTR
CTACTCGTGTGCATTCTAGC+AGG 0.512507 5_3:+68213547 Msa0827150:five_prime_UTR
TCCAAAGAAGCTTGAAGTGA+AGG 0.512770 5_3:-68212939 None:intergenic
CAATGGATGCATGGGATGAA+GGG 0.513916 5_3:+68213592 Msa0827150:five_prime_UTR
GTTGAATGATTAAATGTTGG+TGG 0.514643 5_3:-68217386 None:intergenic
GCCGGGTTATCTGATACCAT+TGG 0.514961 5_3:+68213047 Msa0827150:five_prime_UTR
GAGGCAATAACTTGAGGGAA+AGG 0.519366 5_3:+68216772 Msa0827150:CDS
ATAGAAGAATATTTCAAGCC+AGG 0.520872 5_3:-68214464 None:intergenic
GGTGAAGGAGACCGAATCAA+AGG 0.521308 5_3:-68212801 None:intergenic
GGAAGAGATGGCATTCAAAT+GGG 0.521400 5_3:+68215904 Msa0827150:CDS
GCATTCTAGCAGGGCAAACT+GGG 0.521448 5_3:+68213557 Msa0827150:five_prime_UTR
TGAACCTATAAACAAATGGC+AGG 0.523517 5_3:+68217269 Msa0827150:three_prime_UTR
AAATTCTGAGCAGGTTCCGC+TGG 0.525521 5_3:+68214409 Msa0827150:five_prime_UTR
ATATATGAGCCATCATTCAA+TGG 0.525555 5_3:-68215853 None:intergenic
GATGATGAATACTTCGGTAG+TGG 0.525570 5_3:+68216534 Msa0827150:CDS
AGGCAATAACTTGAGGGAAA+GGG 0.526122 5_3:+68216773 Msa0827150:CDS
TAATCCGAATAGTCTTCTGC+TGG 0.526209 5_3:+68216963 Msa0827150:three_prime_UTR
GTCTGTCTCTTGAAAATCTG+TGG 0.527974 5_3:-68215588 None:intergenic
AATATTACTCACAGTGCACT+TGG 0.527982 5_3:+68213654 Msa0827150:five_prime_UTR
CTGATTAAAATTCTACCAGA+TGG 0.528653 5_3:-68216465 None:intergenic
TTATTGGAGTGCTTTGCTGT+TGG 0.528727 5_3:+68217348 Msa0827150:three_prime_UTR
ATCTGATACCATTGGAAACC+CGG 0.528772 5_3:+68213055 Msa0827150:five_prime_UTR
TAGCCGAGGTCGTGGTGACT+GGG 0.529918 5_3:+68215672 Msa0827150:CDS
ATGTTTCTTGTTCTTCTAGG+TGG 0.530945 5_3:-68216834 None:intergenic
AACAATGGTAATAACAATGT+TGG 0.531891 5_3:+68216672 Msa0827150:CDS
GATGAACATAATGACATTTG+AGG 0.532123 5_3:-68214206 None:intergenic
ATGTCCCTCATATCATTAGA+AGG 0.532489 5_3:-68216390 None:intergenic
GAGAGAGTGGTGAGGAGACA+TGG 0.533770 5_3:+68216345 Msa0827150:CDS
TGAATACTACAATGGATGCA+TGG 0.533948 5_3:+68213583 Msa0827150:five_prime_UTR
CAGGTGCACCTATCAAGAAA+AGG 0.533951 5_3:+68212907 Msa0827150:five_prime_UTR
ATGGTATCCTCCACTTTGGA+AGG 0.534162 5_3:-68214749 None:intergenic
TCACCAGGAGGAGGAAGAGA+TGG 0.534938 5_3:+68215892 Msa0827150:CDS
TCTTCCATGCAGAGAAGGGG+TGG 0.534969 5_3:+68216126 Msa0827150:CDS
GTTACTTCAACTGGTCTGTA+CGG 0.535226 5_3:+68213771 Msa0827150:five_prime_UTR
TTCCACCACACGAGATGAAG+TGG 0.535529 5_3:-68214861 None:intergenic
AGGAAATAAACACCTCTTCA+CGG 0.536910 5_3:-68212603 None:intergenic
AGAAGGAGGTCACCAGGAGG+AGG 0.537792 5_3:+68215883 Msa0827150:CDS
GAACAGAATCTATAATGTCT+AGG 0.538171 5_3:-68216726 None:intergenic
ACAGACACGGCACTTGTTGG+TGG 0.538646 5_3:-68213711 None:intergenic
TTTAGTTGGGACTTCAGTAT+GGG 0.538671 5_3:+68217220 Msa0827150:three_prime_UTR
CCTAATAGTAGATGTATTGG+AGG 0.538765 5_3:+68215952 Msa0827150:CDS
AGTAGATGTATTGGAGGGGA+TGG 0.538810 5_3:+68215958 Msa0827150:CDS
TCAAGGGTAGGAATGGAAAT+GGG 0.539279 5_3:+68216811 Msa0827150:CDS
ATACAACCCAATATGGAGAA+AGG 0.539741 5_3:+68213438 Msa0827150:five_prime_UTR
AAATACTTCTAGTGTTAGGT+TGG 0.540184 5_3:+68213950 Msa0827150:five_prime_UTR
ATCTAATGAACCTAGAAGAC+GGG 0.540750 5_3:-68214027 None:intergenic
TTGGTTGAATGATTAAATGT+TGG 0.542925 5_3:-68217389 None:intergenic
AGACCAGTTAATGTTTCGCA+AGG 0.543573 5_3:+68215034 Msa0827150:five_prime_UTR
CAGTGAAAACAGGTCGATCA+GGG 0.543897 5_3:-68216320 None:intergenic
GAAGGTCGTGATATAAATTG+AGG 0.544234 5_3:-68216372 None:intergenic
TCTGTCTCTTGAAAATCTGT+GGG 0.544472 5_3:-68215587 None:intergenic
ATCTGGAGATCTTCTTCTTG+GGG 0.546028 5_3:-68216229 None:intergenic
CTATTGGAAATGACAGACCT+TGG 0.546564 5_3:-68216438 None:intergenic
GAAGATGATGATTATGAAGA+TGG 0.547048 5_3:+68214704 Msa0827150:five_prime_UTR
CTCACTTCAAATAAAGTAGC+GGG 0.547633 5_3:-68212359 None:intergenic
ACACGTCCCCAACAATTTGA+GGG 0.547961 5_3:+68216057 Msa0827150:CDS
CTAGGAGATGTCCATTGACC+GGG 0.548103 5_3:-68216198 None:intergenic
GATGGTCTAGCACTTAGCAT+TGG 0.549129 5_3:+68213282 Msa0827150:five_prime_UTR
GAAAACTCAAGCACTTCTCA+AGG 0.549211 5_3:+68212858 Msa0827150:five_prime_UTR
ATGAGAGAGGCAATAACTTG+AGG 0.549473 5_3:+68216766 Msa0827150:CDS
TCCACTTTGGAAGGTTCCAG+TGG 0.549663 5_3:-68214740 None:intergenic
ATGATATTTCCAGAGTGAAG+AGG 0.550005 5_3:+68216916 Msa0827150:CDS
GTTAATGTTAACCATCCTAC+CGG 0.550188 5_3:-68216571 None:intergenic
CAGGTGTGCCAATCAAGAAA+AGG 0.552564 5_3:+68212769 Msa0827150:five_prime_UTR
GCCTATGCATTCCGGTAGGA+TGG 0.553493 5_3:+68216560 Msa0827150:CDS
GGTAGAAAGCCATTGAATGA+TGG 0.553531 5_3:+68215844 Msa0827150:CDS
AAGACCACCCCTTCTCTGCA+TGG 0.553535 5_3:-68216130 None:intergenic
GAAAAGGTGATGCTCAATGA+AGG 0.553951 5_3:+68213195 Msa0827150:five_prime_UTR
GATGAATACTTCGGTAGTGG+AGG 0.557632 5_3:+68216537 Msa0827150:CDS
CTTTACTAACTACTTCATTG+TGG 0.557864 5_3:-68214904 None:intergenic
TCCCACTTCATCTCGTGTGG+TGG 0.558202 5_3:+68214859 Msa0827150:five_prime_UTR
AGTACCACAACAAATCAGTT+GGG 0.559569 5_3:+68214173 Msa0827150:five_prime_UTR
CCGCTACTTTATTTGAAGTG+AGG 0.560549 5_3:+68212360 Msa0827150:five_prime_UTR
TTTGCTTATGCCGAAGCGGA+AGG 0.561012 5_3:+68213137 Msa0827150:five_prime_UTR
CGATGTTACCAATATTGACA+TGG 0.561830 5_3:+68213101 Msa0827150:five_prime_UTR
TGGTGAGGTTCGAGAACCAC+TGG 0.562059 5_3:+68214724 Msa0827150:five_prime_UTR
GCATATGGTATCCTCCACTT+TGG 0.562239 5_3:-68214753 None:intergenic
TTCAGACCTCCTTATAACAA+TGG 0.563574 5_3:+68216657 Msa0827150:CDS
TTTGGATGTTGTGAATAGCA+AGG 0.563598 5_3:+68213173 Msa0827150:five_prime_UTR
AGAGTTAATAGCCGAGGTCG+TGG 0.563629 5_3:+68215664 Msa0827150:CDS
TTTACCCAACTGATTTGTTG+TGG 0.563925 5_3:-68214177 None:intergenic
GCACCAAGAAGGAGGTCACC+AGG 0.564752 5_3:+68215877 Msa0827150:CDS
TCTTCCGTACGAGGAGGTGA+AGG 0.565270 5_3:-68212816 None:intergenic
GATCTGGAGTACAATAATGC+TGG 0.565354 5_3:+68215790 Msa0827150:CDS
ATCACTAAACTGCCCAGCAA+AGG 0.565419 5_3:-68212739 None:intergenic
CCAAGTCCGACAGCTACTGC+TGG 0.565564 5_3:+68213921 Msa0827150:five_prime_UTR
CATAGTGAGAAATTTATGAG+AGG 0.565699 5_3:+68216003 Msa0827150:CDS
CAACATGACTGGCACTGTCA+TGG 0.568682 5_3:-68214231 None:intergenic
AAACAAATGGCAGGGTTGGG+TGG 0.569265 5_3:+68217278 Msa0827150:three_prime_UTR
TTGAATGATTAAATGTTGGT+GGG 0.571139 5_3:-68217385 None:intergenic
TATTCACAACATCCAAAGAA+GGG 0.571735 5_3:-68213167 None:intergenic
GTTAACATTAACAATGGTGA+AGG 0.571735 5_3:+68216582 Msa0827150:CDS
ATTCAATCTAGAATTTCTAG+TGG 0.571786 5_3:-68215623 None:intergenic
CAACAATTTGAGGGAATGGA+TGG 0.573050 5_3:+68216066 Msa0827150:CDS
ATGATTCATATGTTAATGGT+CGG 0.573230 5_3:+68215818 Msa0827150:CDS
TCCAATGGTATCAGATAACC+CGG 0.573838 5_3:-68213048 None:intergenic
TGTGTTGAATTCAACATGAC+TGG 0.574452 5_3:-68214242 None:intergenic
GTGAAGGAAATGGTGAGGAG+AGG 0.576483 5_3:+68216598 Msa0827150:CDS
TTAGCTTAAGCCATTCTAAG+TGG 0.577546 5_3:+68217086 Msa0827150:three_prime_UTR
TAGACTTATTATTTCAAATG+GGG 0.577841 5_3:+68217563 Msa0827150:three_prime_UTR
GAACGACTCCTCGATCTGAT+GGG 0.579413 5_3:-68216174 None:intergenic
TCCATTCCCTCAAATTGTTG+GGG 0.579605 5_3:-68216063 None:intergenic
AACTCAGTTTCTTCCGTACG+AGG 0.581519 5_3:-68212825 None:intergenic
TTGATAGAAGGATCAAGGGT+AGG 0.583187 5_3:+68216799 Msa0827150:CDS
CAAGAGGAAGAGGACGGGGT+AGG 0.583638 5_3:+68216097 Msa0827150:CDS
CCTTGCAATCAAGCCACTGA+TGG 0.583732 5_3:+68215115 Msa0827150:five_prime_UTR
GAGTACCACAACAAATCAGT+TGG 0.584233 5_3:+68214172 Msa0827150:five_prime_UTR
CAAGAAGATAATTTCAGGCA+TGG 0.584482 5_3:+68216864 Msa0827150:CDS
GATAATGATGATGAATACTT+CGG 0.585751 5_3:+68216528 Msa0827150:CDS
ATCAACAATACCGTGGCGCA+AGG 0.585756 5_3:+68215737 Msa0827150:CDS
AACAGTTTACGTGCTCGACT+GGG 0.586460 5_3:+68213682 Msa0827150:five_prime_UTR
GTACACACAGGTTTCACAGC+AGG 0.586615 5_3:-68214287 None:intergenic
CTAATAGTAGATGTATTGGA+GGG 0.586615 5_3:+68215953 Msa0827150:CDS
GACTTTGATAGAAGGATCAA+GGG 0.588082 5_3:+68216795 Msa0827150:CDS
AAAGAAGCTTGAAGTGAAGG+AGG 0.588171 5_3:-68212936 None:intergenic
AGTCTTCTGCTGGAGGACAA+TGG 0.588518 5_3:+68216973 Msa0827150:three_prime_UTR
AGTTTAACAGATACTCTAGA+GGG 0.589079 5_3:-68213864 None:intergenic
TGAGGGACATTGACTCTGCA+AGG 0.589450 5_3:+68216403 Msa0827150:CDS
CAAGGGACCATGGTCATCCA+AGG 0.589530 5_3:+68216421 Msa0827150:CDS
AATTTGAGGGAATGGATGGT+CGG 0.590551 5_3:+68216070 Msa0827150:CDS
ATTGACTCTGCAAGGGACCA+TGG 0.590625 5_3:+68216411 Msa0827150:CDS
GAATACTACAATGGATGCAT+GGG 0.590714 5_3:+68213584 Msa0827150:five_prime_UTR
ACGACCTTCTAATGATATGA+GGG 0.592017 5_3:+68216386 Msa0827150:CDS
GCTCATATATTGCACCAAGA+AGG 0.593462 5_3:+68215866 Msa0827150:CDS
GCCCATCTCAGGCCGTGAAG+AGG 0.594748 5_3:+68212591 Msa0827150:five_prime_UTR
TGTGTGTGTGCAAGAGTCGA+TGG 0.595528 5_3:+68214979 Msa0827150:five_prime_UTR
ATTAGAACTATCTTTAAGCA+AGG 0.596628 5_3:+68213473 Msa0827150:five_prime_UTR
TTATTACCATTGTTATAAGG+AGG 0.596789 5_3:-68216663 None:intergenic
AGGAGGTTTGGTGAAAGAAG+AGG 0.597081 5_3:+68216621 Msa0827150:CDS
GCGAGCAGATTGTCTTGTCA+AGG 0.597545 5_3:+68217158 Msa0827150:three_prime_UTR
CTGGGATCTGAATACTACAA+TGG 0.598186 5_3:+68213575 Msa0827150:five_prime_UTR
TCTGCAACCATCATGTTCAT+CGG 0.598749 5_3:-68214507 None:intergenic
ACATCTCTTCCAGCTCGAGT+TGG 0.600517 5_3:-68215362 None:intergenic
GTGGGATAAAGTCCTTTGCT+GGG 0.600853 5_3:+68212727 Msa0827150:five_prime_UTR
TGTTGTGAATAGCAAGGAAA+AGG 0.601251 5_3:+68213179 Msa0827150:five_prime_UTR
AGAAGACTATTCGGATTAAG+GGG 0.601506 5_3:-68216958 None:intergenic
TCCGAATAGTCTTCTGCTGG+AGG 0.601893 5_3:+68216966 Msa0827150:three_prime_UTR
GAAACAGAACATCCTGACTC+AGG 0.602901 5_3:+68214785 Msa0827150:five_prime_UTR
AGATCGAGGAGTCGTTCACC+CGG 0.603349 5_3:+68216180 Msa0827150:CDS
TCATAGCAATGATAATCGGT+TGG 0.604134 5_3:-68217408 None:intergenic
TAAATCTGAACCAAGTCATG+AGG 0.604815 5_3:+68214121 Msa0827150:five_prime_UTR
CATGTCAATATTGGTAACAT+CGG 0.605115 5_3:-68213100 None:intergenic
ACCACTGGAACCTTCCAAAG+TGG 0.607998 5_3:+68214739 Msa0827150:five_prime_UTR
TATCACATGTCTTCCATCAG+TGG 0.608534 5_3:-68215128 None:intergenic
TTCCAACATATCAGTTGACA+AGG 0.612146 5_3:-68214603 None:intergenic
GCAGATTGTCTTGTCAAGGA+AGG 0.613499 5_3:+68217162 Msa0827150:three_prime_UTR
TACTCGTGTGCATTCTAGCA+GGG 0.616378 5_3:+68213548 Msa0827150:five_prime_UTR
CCACTGTCTCGTGCATCAGT+AGG 0.616416 5_3:-68214548 None:intergenic
TATCTAATGAACCTAGAAGA+CGG 0.619088 5_3:-68214028 None:intergenic
TAGTTTAACAGATACTCTAG+AGG 0.619656 5_3:-68213865 None:intergenic
ATTCCCAGTCACCACGACCT+CGG 0.619986 5_3:-68215675 None:intergenic
GTTCTTTGCTTATGCCGAAG+CGG 0.620541 5_3:+68213133 Msa0827150:five_prime_UTR
CATATATTGCACCAAGAAGG+AGG 0.621278 5_3:+68215869 Msa0827150:CDS
GAAGGAGACCGAATCAAAGG+AGG 0.621543 5_3:-68212798 None:intergenic
TTCAAGCCAGGAGTAACCAT+AGG 0.621756 5_3:-68214452 None:intergenic
CCTCACTTCAAATAAAGTAG+CGG 0.625650 5_3:-68212360 None:intergenic
GTTAATACTGCTGTACACAC+AGG 0.626163 5_3:-68214299 None:intergenic
TGTACAGCAGTATTAACTAC+CGG 0.627022 5_3:+68214305 Msa0827150:five_prime_UTR
ATGAATACTTCGGTAGTGGA+GGG 0.627136 5_3:+68216538 Msa0827150:CDS
GTGACAAGTTATACAGAGGA+AGG 0.627621 5_3:+68215405 Msa0827150:CDS
AAATCTGAACCAAGTCATGA+GGG 0.627722 5_3:+68214122 Msa0827150:five_prime_UTR
TAGAAGATCACCATTATACA+GGG 0.629026 5_3:+68216281 Msa0827150:CDS
TTTCATCTAAATGCTGAAGA+CGG 0.629128 5_3:+68216702 Msa0827150:CDS
ACCAGTGGAGAAAGGAGTGG+TGG 0.632899 5_3:+68214823 Msa0827150:five_prime_UTR
GGCGAAAGACATAGATTACG+TGG 0.633289 5_3:-68213816 None:intergenic
GACCAGTTAATGTTTCGCAA+GGG 0.634373 5_3:+68215035 Msa0827150:five_prime_UTR
AGATGTTCTATGTGCTGATG+AGG 0.634848 5_3:+68215150 Msa0827150:five_prime_UTR
AAGAAGCTTGAAGTGAAGGA+GGG 0.635303 5_3:-68212935 None:intergenic
TAATAGTAGATGTATTGGAG+GGG 0.638418 5_3:+68215954 Msa0827150:CDS
TTATCCCACTTCATCTCGTG+TGG 0.638559 5_3:+68214856 Msa0827150:five_prime_UTR
AGAGGAAGAGTTAATAGCCG+AGG 0.639606 5_3:+68215658 Msa0827150:CDS
CAATGGTGAAGGAAATGGTG+AGG 0.642534 5_3:+68216593 Msa0827150:CDS
GCATCACCAGCAGTAGCTGT+CGG 0.643723 5_3:-68213927 None:intergenic
TAAGCTAAAGCAATGCAGCA+AGG 0.643999 5_3:-68217071 None:intergenic
ATATCCGAACTTGTAACAGA+CGG 0.645643 5_3:-68213408 None:intergenic
TCCACCACACGAGATGAAGT+GGG 0.646428 5_3:-68214860 None:intergenic
GTGTGCCAATCAAGAAAAGG+AGG 0.646569 5_3:+68212772 Msa0827150:five_prime_UTR
ACCTAGAAGAACAAGAAACA+TGG 0.647178 5_3:+68216836 Msa0827150:CDS
GAAGATAATTTCAGGCATGG+TGG 0.649167 5_3:+68216867 Msa0827150:CDS
CAAAATCACCCATCAGATCG+AGG 0.651523 5_3:+68216166 Msa0827150:CDS
AGGATGGTTAACATTAACAA+TGG 0.652887 5_3:+68216576 Msa0827150:CDS
GAACCTATAAACAAATGGCA+GGG 0.653965 5_3:+68217270 Msa0827150:three_prime_UTR
TGCAGAAAAGTAAACAGACG+TGG 0.654190 5_3:+68217500 Msa0827150:three_prime_UTR
GAGGGACATTGACTCTGCAA+GGG 0.656182 5_3:+68216404 Msa0827150:CDS
TCATTATCAGATCGATCTCG+GGG 0.657381 5_3:-68216513 None:intergenic
ACCATCCTACCGGAATGCAT+AGG 0.657514 5_3:-68216561 None:intergenic
ATTCAAATGAATGAGAAACC+TGG 0.658290 5_3:+68214938 Msa0827150:five_prime_UTR
ACTGGAACCTTCCAAAGTGG+AGG 0.660298 5_3:+68214742 Msa0827150:five_prime_UTR
ATAACCAAAGATGTTACTAA+CGG 0.660450 5_3:+68215251 Msa0827150:CDS
GCGTGTTTGATTTACAGACA+CGG 0.660939 5_3:-68213724 None:intergenic
CGGACAGCAGTTTAAATGTG+CGG 0.662176 5_3:+68213791 Msa0827150:five_prime_UTR
TGTGTGCAAGAGTCGATGGA+TGG 0.662221 5_3:+68214983 Msa0827150:five_prime_UTR
GTTCAGACTTAGGTGGCATG+AGG 0.663487 5_3:+68215980 Msa0827150:CDS
TGACAGACCTTGGATGACCA+TGG 0.667016 5_3:-68216428 None:intergenic
GAAGTTGCCGATGAACATGA+TGG 0.670129 5_3:+68214500 Msa0827150:five_prime_UTR
GTGCACCTATCAAGAAAAGG+AGG 0.670530 5_3:+68212910 Msa0827150:five_prime_UTR
AAGGAGACCGAATCAAAGGA+GGG 0.673998 5_3:-68212797 None:intergenic
GGAGGTCTGAAAGAACGCAC+AGG 0.674972 5_3:-68216645 None:intergenic
AATGGACATCTCCTAGAAGG+AGG 0.675530 5_3:+68216205 Msa0827150:CDS
TCAGTTTCTTCCGTACGAGG+AGG 0.676250 5_3:-68212822 None:intergenic
GATGCACGAGACAGTGGTGT+AGG 0.679696 5_3:+68214554 Msa0827150:five_prime_UTR
GAGGGCCTATGCATTCCGGT+AGG 0.679811 5_3:+68216556 Msa0827150:CDS
AGTAGTTAGTAAAGATGACG+TGG 0.680898 5_3:+68214913 Msa0827150:five_prime_UTR
TCTAGCACTTAGCATTGGAG+CGG 0.685535 5_3:+68213287 Msa0827150:five_prime_UTR
CCAAGAAGAAGATCTCCAGA+TGG 0.685641 5_3:+68216231 Msa0827150:CDS
AGTGAAAACAGGTCGATCAG+GGG 0.693262 5_3:-68216319 None:intergenic
CTACAGCAACAGTTACAGCA+TGG 0.693466 5_3:-68214664 None:intergenic
GAAATAGCAACTGTTACCAG+CGG 0.693730 5_3:-68214425 None:intergenic
TAAACCAGTGGAGAAAGGAG+TGG 0.694524 5_3:+68214820 Msa0827150:five_prime_UTR
TAATTATGATAATAAACCAG+TGG 0.697261 5_3:+68214808 Msa0827150:five_prime_UTR
AGTGGAGGATACCATATGCG+AGG 0.697835 5_3:+68214757 Msa0827150:five_prime_UTR
CCTACTGATGCACGAGACAG+TGG 0.701542 5_3:+68214548 Msa0827150:five_prime_UTR
TGATGATTATGAAGATGGTG+AGG 0.704434 5_3:+68214709 Msa0827150:five_prime_UTR
GGGGATGGTTCAGACTTAGG+TGG 0.706692 5_3:+68215973 Msa0827150:CDS
AAGGGTTGAACTCAGTGATG+TGG 0.710011 5_3:-68213012 None:intergenic
GATGGTGACAAGTTATACAG+AGG 0.712102 5_3:+68215401 Msa0827150:CDS
CCAAGAAGGAGGTCACCAGG+AGG 0.715766 5_3:+68215880 Msa0827150:CDS
TCACTGGGGAGAGAGTGGTG+AGG 0.719867 5_3:+68216337 Msa0827150:CDS
GGTCCAAATCAACAATACCG+TGG 0.726181 5_3:+68215730 Msa0827150:CDS
CTGTCTCTTGAAAATCTGTG+GGG 0.726330 5_3:-68215586 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTATATTATTGATATTT+TGG + chr5_3:68212249-68212268 Msa0827150:intron 10.0%
!! TAAATAAGTACTAAATTATT+AGG - chr5_3:68217331-68217350 None:intergenic 10.0%
!! ATAATTTAGTACTTATTTAT+TGG + chr5_3:68217332-68217351 Msa0827150:three_prime_UTR 10.0%
!! TTTCATTCAATCAATAAATT+CGG + chr5_3:68211560-68211579 Msa0827150:five_prime_UTR 15.0%
!! CTATTTGAAAAAAAAAACTA+GGG - chr5_3:68211600-68211619 None:intergenic 15.0%
!! TCTATTTGAAAAAAAAAACT+AGG - chr5_3:68211601-68211620 None:intergenic 15.0%
!!! TATTGTTTGTTTATTGATTT+TGG + chr5_3:68212222-68212241 Msa0827150:intron 15.0%
!!! TAACTTGAATATTTTTATTG+AGG + chr5_3:68212473-68212492 Msa0827150:five_prime_UTR 15.0%
!!! TTGATTTTTTTTTCAATTAC+CGG - chr5_3:68213077-68213096 None:intergenic 15.0%
!! GAATACAATTCAATTAATAA+GGG - chr5_3:68215506-68215525 None:intergenic 15.0%
!! TGAATACAATTCAATTAATA+AGG - chr5_3:68215507-68215526 None:intergenic 15.0%
!! TTTAGACTTATTATTTCAAA+TGG + chr5_3:68217561-68217580 Msa0827150:three_prime_UTR 15.0%
!! TTCCAACATATGATTATATT+TGG + chr5_3:68212073-68212092 Msa0827150:intron 20.0%
!! AACCAAATATAATCATATGT+TGG - chr5_3:68212078-68212097 None:intergenic 20.0%
!! AACATATGATTATATTTGGT+TGG + chr5_3:68212077-68212096 Msa0827150:intron 20.0%
!!! TGGTGTAATTAAATTTTCAT+AGG + chr5_3:68212269-68212288 Msa0827150:intron 20.0%
!!! TGATTTTTTTTTCAATTACC+GGG - chr5_3:68213076-68213095 None:intergenic 20.0%
!! TAATTATGATAATAAACCAG+TGG + chr5_3:68214808-68214827 Msa0827150:five_prime_UTR 20.0%
!! AAAATAGTAGTAGTATAGAT+AGG - chr5_3:68215444-68215463 None:intergenic 20.0%
!! AATGGTAGTAGTATATATAT+AGG - chr5_3:68215480-68215499 None:intergenic 20.0%
!!! AGAAATTCTAGATTGAATTT+TGG + chr5_3:68215628-68215647 Msa0827150:CDS 20.0%
!!! GAAATTCTAGATTGAATTTT+GGG + chr5_3:68215629-68215648 Msa0827150:CDS 20.0%
!!! TTGTTATTACCATTGTTATA+AGG - chr5_3:68216669-68216688 None:intergenic 20.0%
!! TGAACAAGTAAAATTTAGTT+GGG + chr5_3:68217207-68217226 Msa0827150:three_prime_UTR 20.0%
! AAAACCTGATAAGAAAAACA+AGG - chr5_3:68211747-68211766 None:intergenic 25.0%
! AAATATATACCGTAAATTGC+AGG - chr5_3:68211875-68211894 None:intergenic 25.0%
!!! ATTTTCCGCTTTTTCTTTAT+AGG + chr5_3:68211925-68211944 Msa0827150:intron 25.0%
! CTAAACCTATAAAGAAAAAG+CGG - chr5_3:68211933-68211952 None:intergenic 25.0%
! AGAAAAAAAAAACCCATTGA+GGG - chr5_3:68212024-68212043 None:intergenic 25.0%
! AAGAAAAAAAAAACCCATTG+AGG - chr5_3:68212025-68212044 None:intergenic 25.0%
!!! TGGTAAAGTTTGTTTTTTGT+TGG + chr5_3:68212097-68212116 Msa0827150:intron 25.0%
!!! GGTAAAGTTTGTTTTTTGTT+GGG + chr5_3:68212098-68212117 Msa0827150:intron 25.0%
!!! ATTTAGAGTGGATTTTTTGT+CGG + chr5_3:68212123-68212142 Msa0827150:intron 25.0%
! TAGTTTCATAGTACTTAACT+TGG + chr5_3:68212153-68212172 Msa0827150:intron 25.0%
!!! GTTTGTTTTGTTTTGATCAA+TGG + chr5_3:68212294-68212313 Msa0827150:intron 25.0%
!!! TTGTTTTGATCAATGGTTTA+AGG + chr5_3:68212301-68212320 Msa0827150:intron 25.0%
! AAGAATAGTTTATTCGATAC+AGG + chr5_3:68212440-68212459 Msa0827150:five_prime_UTR 25.0%
! CAAAATAGAACAAATTGTCA+TGG - chr5_3:68212676-68212695 None:intergenic 25.0%
!!! CATGACAATTTGTTCTATTT+TGG + chr5_3:68212674-68212693 Msa0827150:intron 25.0%
! ATTAGAACTATCTTTAAGCA+AGG + chr5_3:68213473-68213492 Msa0827150:five_prime_UTR 25.0%
!!! AATAGAAGTTTTAACAGAAC+TGG - chr5_3:68213625-68213644 None:intergenic 25.0%
! TCTGTTAAAACTTCTATTGA+TGG + chr5_3:68213627-68213646 Msa0827150:five_prime_UTR 25.0%
! CTGTTAAAACTTCTATTGAT+GGG + chr5_3:68213628-68213647 Msa0827150:five_prime_UTR 25.0%
! GTATCTGTTAAACTAAATTC+AGG + chr5_3:68213873-68213892 Msa0827150:five_prime_UTR 25.0%
!!! TTTTTCAAGTTCTCATCATA+CGG - chr5_3:68213987-68214006 None:intergenic 25.0%
!!! TTGACCTACTATATTTTTAC+CGG - chr5_3:68214327-68214346 None:intergenic 25.0%
! TAAAAATATAGTAGGTCAAC+TGG + chr5_3:68214328-68214347 Msa0827150:five_prime_UTR 25.0%
!! TTTTTATCAATGACTTTACC+AGG - chr5_3:68214959-68214978 None:intergenic 25.0%
! ATAACCAAAGATGTTACTAA+CGG + chr5_3:68215251-68215270 Msa0827150:CDS 25.0%
! TTCAATTAATAAGGGCAAAA+TGG - chr5_3:68215498-68215517 None:intergenic 25.0%
!! ATTCAATCTAGAATTTCTAG+TGG - chr5_3:68215626-68215645 None:intergenic 25.0%
!! TATTCTGGTGAATTTTACAA+TGG + chr5_3:68215709-68215728 Msa0827150:CDS 25.0%
! ATGATTCATATGTTAATGGT+CGG + chr5_3:68215818-68215837 Msa0827150:CDS 25.0%
! TTATTACCATTGTTATAAGG+AGG - chr5_3:68216666-68216685 None:intergenic 25.0%
! AACAATGGTAATAACAATGT+TGG + chr5_3:68216672-68216691 Msa0827150:CDS 25.0%
! GGAAAAAAAAAATGAAGTTC+TGG + chr5_3:68217110-68217129 Msa0827150:three_prime_UTR 25.0%
! CTGAACAAGTAAAATTTAGT+TGG + chr5_3:68217206-68217225 Msa0827150:three_prime_UTR 25.0%
! AAACTGAACCTATAAACAAA+TGG + chr5_3:68217265-68217284 Msa0827150:three_prime_UTR 25.0%
! AGTACTAAATTATTAGGAAC+AGG - chr5_3:68217325-68217344 None:intergenic 25.0%
! TTGAATGATTAAATGTTGGT+GGG - chr5_3:68217388-68217407 None:intergenic 25.0%
! TTGGTTGAATGATTAAATGT+TGG - chr5_3:68217392-68217411 None:intergenic 25.0%
!!! TAAGTCGCTTTATTTTACTT+TGG - chr5_3:68217468-68217487 None:intergenic 25.0%
!!! ACAACCTTGTTTTTCTTATC+AGG + chr5_3:68211740-68211759 Msa0827150:five_prime_UTR 30.0%
AAAGCGGAAAATAATGTGTA+GGG - chr5_3:68211917-68211936 None:intergenic 30.0%
AAAAGCGGAAAATAATGTGT+AGG - chr5_3:68211918-68211937 None:intergenic 30.0%
ACAGAAAACTAAGAATCAAG+CGG - chr5_3:68211992-68212011 None:intergenic 30.0%
!! TGTTTTTAAATCCCCTCAAT+GGG + chr5_3:68212009-68212028 Msa0827150:intron 30.0%
GAAAAAAAAAACCCATTGAG+GGG - chr5_3:68212023-68212042 None:intergenic 30.0%
! TTTTGTTGGGTAATTTAGAG+TGG + chr5_3:68212111-68212130 Msa0827150:intron 30.0%
! TTTTGATCAATGGTTTAAGG+TGG + chr5_3:68212304-68212323 Msa0827150:intron 30.0%
!!! CTTTACATGTTTTGTTTTGC+AGG + chr5_3:68212334-68212353 Msa0827150:intron 30.0%
TAGCTGTAAATCAATCAGAA+AGG - chr5_3:68212626-68212645 None:intergenic 30.0%
TTGATCTTATATTGACAGAG+TGG + chr5_3:68212708-68212727 Msa0827150:intron 30.0%
TGATCTTATATTGACAGAGT+GGG + chr5_3:68212709-68212728 Msa0827150:intron 30.0%
! CATGTCAATATTGGTAACAT+CGG - chr5_3:68213103-68213122 None:intergenic 30.0%
! TTTTTGCACCATGTCAATAT+TGG - chr5_3:68213112-68213131 None:intergenic 30.0%
TATTCACAACATCCAAAGAA+GGG - chr5_3:68213170-68213189 None:intergenic 30.0%
GAAGGTAATGAGAAAAATTC+AGG + chr5_3:68213213-68213232 Msa0827150:five_prime_UTR 30.0%
AGGATTTGCCTTAATTGTTT+GGG - chr5_3:68213241-68213260 None:intergenic 30.0%
AAAGATAAAGTAGTACTTCC+AGG - chr5_3:68213366-68213385 None:intergenic 30.0%
CAATAAGATACAACCCAATA+TGG + chr5_3:68213431-68213450 Msa0827150:five_prime_UTR 30.0%
!! AAAGATAGTTCTAATGAGAC+AGG - chr5_3:68213468-68213487 None:intergenic 30.0%
AGTTTAACAGATACTCTAGA+GGG - chr5_3:68213867-68213886 None:intergenic 30.0%
TAGTTTAACAGATACTCTAG+AGG - chr5_3:68213868-68213887 None:intergenic 30.0%
ATGCAAATACTTCTAGTGTT+AGG + chr5_3:68213946-68213965 Msa0827150:five_prime_UTR 30.0%
AAATACTTCTAGTGTTAGGT+TGG + chr5_3:68213950-68213969 Msa0827150:five_prime_UTR 30.0%
TATCTAATGAACCTAGAAGA+CGG - chr5_3:68214031-68214050 None:intergenic 30.0%
AATGTAGAATCGACATTAGA+TGG - chr5_3:68214098-68214117 None:intergenic 30.0%
GATGAACATAATGACATTTG+AGG - chr5_3:68214209-68214228 None:intergenic 30.0%
ACTACCGGTAAAAATATAGT+AGG + chr5_3:68214320-68214339 Msa0827150:five_prime_UTR 30.0%
!! AGTTGCTATTTCTAATCCTA+TGG + chr5_3:68214436-68214455 Msa0827150:five_prime_UTR 30.0%
ATAGAAGAATATTTCAAGCC+AGG - chr5_3:68214467-68214486 None:intergenic 30.0%
! ATGTTGGAAGATGATTCTTT+TGG + chr5_3:68214617-68214636 Msa0827150:five_prime_UTR 30.0%
GAAGATGATGATTATGAAGA+TGG + chr5_3:68214704-68214723 Msa0827150:five_prime_UTR 30.0%
TTATCATAATTACCTGAGTC+AGG - chr5_3:68214800-68214819 None:intergenic 30.0%
CTTTACTAACTACTTCATTG+TGG - chr5_3:68214907-68214926 None:intergenic 30.0%
ATTCAAATGAATGAGAAACC+TGG + chr5_3:68214938-68214957 Msa0827150:five_prime_UTR 30.0%
!! AATAATTGTCTCTGAAACTC+AGG + chr5_3:68215081-68215100 Msa0827150:five_prime_UTR 30.0%
!!! AAATAGGCCTAGTTTTACTA+GGG - chr5_3:68215328-68215347 None:intergenic 30.0%
GTAGTATAGATAGGACTAAA+AGG - chr5_3:68215435-68215454 None:intergenic 30.0%
CCATTAACATATGAATCATC+AGG - chr5_3:68215817-68215836 None:intergenic 30.0%
CCTGATGATTCATATGTTAA+TGG + chr5_3:68215814-68215833 Msa0827150:CDS 30.0%
ATATATGAGCCATCATTCAA+TGG - chr5_3:68215856-68215875 None:intergenic 30.0%
AGTCCTAATAGTAGATGTAT+TGG + chr5_3:68215949-68215968 Msa0827150:CDS 30.0%
CTAATAGTAGATGTATTGGA+GGG + chr5_3:68215953-68215972 Msa0827150:CDS 30.0%
TAATAGTAGATGTATTGGAG+GGG + chr5_3:68215954-68215973 Msa0827150:CDS 30.0%
CATAGTGAGAAATTTATGAG+AGG + chr5_3:68216003-68216022 Msa0827150:CDS 30.0%
ATAGAAGATCACCATTATAC+AGG + chr5_3:68216280-68216299 Msa0827150:CDS 30.0%
TAGAAGATCACCATTATACA+GGG + chr5_3:68216281-68216300 Msa0827150:CDS 30.0%
CTGATTAAAATTCTACCAGA+TGG - chr5_3:68216468-68216487 None:intergenic 30.0%
AGGATGGTTAACATTAACAA+TGG + chr5_3:68216576-68216595 Msa0827150:CDS 30.0%
GTTAACATTAACAATGGTGA+AGG + chr5_3:68216582-68216601 Msa0827150:CDS 30.0%
ATTAACAATGGTGAAGGAAA+TGG + chr5_3:68216588-68216607 Msa0827150:CDS 30.0%
TTTCATCTAAATGCTGAAGA+CGG + chr5_3:68216702-68216721 Msa0827150:CDS 30.0%
GAACAGAATCTATAATGTCT+AGG - chr5_3:68216729-68216748 None:intergenic 30.0%
ATGAGCAAGAAGATAATTTC+AGG + chr5_3:68216859-68216878 Msa0827150:CDS 30.0%
!!! TTTTTTTCCACCACTTAGAA+TGG - chr5_3:68217099-68217118 None:intergenic 30.0%
! GTTTCTAGATATAGCAAGTT+TGG - chr5_3:68217249-68217268 None:intergenic 30.0%
GTTGAATGATTAAATGTTGG+TGG - chr5_3:68217389-68217408 None:intergenic 30.0%
CAAGTCATAGCAATGATAAT+CGG - chr5_3:68217415-68217434 None:intergenic 30.0%
! TTGGTGTGCTATTCATTTAA+GGG - chr5_3:68217449-68217468 None:intergenic 30.0%
! TTTGGTGTGCTATTCATTTA+AGG - chr5_3:68217450-68217469 None:intergenic 30.0%
! ATGTGAGAAAAAGGGTTTTG+GGG - chr5_3:68211714-68211733 None:intergenic 35.0%
! GATGTGAGAAAAAGGGTTTT+GGG - chr5_3:68211715-68211734 None:intergenic 35.0%
! TGATGTGAGAAAAAGGGTTT+TGG - chr5_3:68211716-68211735 None:intergenic 35.0%
GTGTTGTGATGTGAGAAAAA+GGG - chr5_3:68211722-68211741 None:intergenic 35.0%
TGTGTTGTGATGTGAGAAAA+AGG - chr5_3:68211723-68211742 None:intergenic 35.0%
TGACGATGAAAAACAGGAAT+AGG - chr5_3:68211794-68211813 None:intergenic 35.0%
AGATCTTGACGATGAAAAAC+AGG - chr5_3:68211800-68211819 None:intergenic 35.0%
AAGCGGAAAATAATGTGTAG+GGG - chr5_3:68211916-68211935 None:intergenic 35.0%
!!! CTGTTTTTAAATCCCCTCAA+TGG + chr5_3:68212008-68212027 Msa0827150:intron 35.0%
CTCACTTCAAATAAAGTAGC+GGG - chr5_3:68212362-68212381 None:intergenic 35.0%
CCTCACTTCAAATAAAGTAG+CGG - chr5_3:68212363-68212382 None:intergenic 35.0%
! CTTTATTTGAAGTGAGGCTA+AGG + chr5_3:68212366-68212385 Msa0827150:five_prime_UTR 35.0%
AGGAAATAAACACCTCTTCA+CGG - chr5_3:68212606-68212625 None:intergenic 35.0%
CAGTTTAGTGATTTAGTTGC+AGG + chr5_3:68212750-68212769 Msa0827150:five_prime_UTR 35.0%
CTATCAAATGTCAGTATTGC+AGG + chr5_3:68212888-68212907 Msa0827150:five_prime_UTR 35.0%
AAAAAGTCATGCTTTGCGAA+AGG + chr5_3:68212980-68212999 Msa0827150:five_prime_UTR 35.0%
CGATGTTACCAATATTGACA+TGG + chr5_3:68213101-68213120 Msa0827150:five_prime_UTR 35.0%
CTATTCACAACATCCAAAGA+AGG - chr5_3:68213171-68213190 None:intergenic 35.0%
TTTGGATGTTGTGAATAGCA+AGG + chr5_3:68213173-68213192 Msa0827150:five_prime_UTR 35.0%
TGTTGTGAATAGCAAGGAAA+AGG + chr5_3:68213179-68213198 Msa0827150:five_prime_UTR 35.0%
TTCAGGATCCCAAACAATTA+AGG + chr5_3:68213230-68213249 Msa0827150:five_prime_UTR 35.0%
CAGGATTTGCCTTAATTGTT+TGG - chr5_3:68213242-68213261 None:intergenic 35.0%
ATATCCGAACTTGTAACAGA+CGG - chr5_3:68213411-68213430 None:intergenic 35.0%
ATACAACCCAATATGGAGAA+AGG + chr5_3:68213438-68213457 Msa0827150:five_prime_UTR 35.0%
!! GTCACTATCACTTTTAGCAT+CGG - chr5_3:68213526-68213545 None:intergenic 35.0%
TGAATACTACAATGGATGCA+TGG + chr5_3:68213583-68213602 Msa0827150:five_prime_UTR 35.0%
GAATACTACAATGGATGCAT+GGG + chr5_3:68213584-68213603 Msa0827150:five_prime_UTR 35.0%
AATATTACTCACAGTGCACT+TGG + chr5_3:68213654-68213673 Msa0827150:five_prime_UTR 35.0%
AAAGCTTTCGTTACTTCAAC+TGG + chr5_3:68213762-68213781 Msa0827150:five_prime_UTR 35.0%
TCGACATACTTCTGAACAAA+AGG - chr5_3:68213840-68213859 None:intergenic 35.0%
!! TTTTGTTCAGAAGTATGTCG+AGG + chr5_3:68213839-68213858 Msa0827150:five_prime_UTR 35.0%
ATCTAATGAACCTAGAAGAC+GGG - chr5_3:68214030-68214049 None:intergenic 35.0%
TAAATCTGAACCAAGTCATG+AGG + chr5_3:68214121-68214140 Msa0827150:five_prime_UTR 35.0%
AAATCTGAACCAAGTCATGA+GGG + chr5_3:68214122-68214141 Msa0827150:five_prime_UTR 35.0%
AGTACCACAACAAATCAGTT+GGG + chr5_3:68214173-68214192 Msa0827150:five_prime_UTR 35.0%
!! TTTACCCAACTGATTTGTTG+TGG - chr5_3:68214180-68214199 None:intergenic 35.0%
TGTGTTGAATTCAACATGAC+TGG - chr5_3:68214245-68214264 None:intergenic 35.0%
! TTCAACACAAGTTTTTGCAG+AGG + chr5_3:68214256-68214275 Msa0827150:five_prime_UTR 35.0%
TGTACAGCAGTATTAACTAC+CGG + chr5_3:68214305-68214324 Msa0827150:five_prime_UTR 35.0%
AACCTTGTCAACTGATATGT+TGG + chr5_3:68214601-68214620 Msa0827150:five_prime_UTR 35.0%
TTCCAACATATCAGTTGACA+AGG - chr5_3:68214606-68214625 None:intergenic 35.0%
!!! GAAGATGATTCTTTTGGTTC+TGG + chr5_3:68214623-68214642 Msa0827150:five_prime_UTR 35.0%
! AGTTACAGCATGGTTTTCAT+CGG - chr5_3:68214657-68214676 None:intergenic 35.0%
TGATGATTATGAAGATGGTG+AGG + chr5_3:68214709-68214728 Msa0827150:five_prime_UTR 35.0%
GATAATAAACCAGTGGAGAA+AGG + chr5_3:68214815-68214834 Msa0827150:five_prime_UTR 35.0%
AGTAGTTAGTAAAGATGACG+TGG + chr5_3:68214913-68214932 Msa0827150:five_prime_UTR 35.0%
ACTACCGTTAGTAACATCTT+TGG - chr5_3:68215258-68215277 None:intergenic 35.0%
GTTACTAACGGTAGTAATCA+AGG + chr5_3:68215263-68215282 Msa0827150:CDS 35.0%
!!! AATAGGCCTAGTTTTACTAG+GGG - chr5_3:68215327-68215346 None:intergenic 35.0%
!!! GAAATAGGCCTAGTTTTACT+AGG - chr5_3:68215329-68215348 None:intergenic 35.0%
AGTAAAACTAGGCCTATTTC+AGG + chr5_3:68215329-68215348 Msa0827150:CDS 35.0%
AGGGATGAAGTTTACATTGA+TGG + chr5_3:68215562-68215581 Msa0827150:intron 35.0%
TCTGTCTCTTGAAAATCTGT+GGG - chr5_3:68215590-68215609 None:intergenic 35.0%
TCATATGTTAATGGTCGGTT+AGG + chr5_3:68215823-68215842 Msa0827150:CDS 35.0%
CATCTACTATTAGGACTAAC+AGG - chr5_3:68215946-68215965 None:intergenic 35.0%
CCTCCAATACATCTACTATT+AGG - chr5_3:68215955-68215974 None:intergenic 35.0%
CCTAATAGTAGATGTATTGG+AGG + chr5_3:68215952-68215971 Msa0827150:CDS 35.0%
ATCCATTCCCTCAAATTGTT+GGG - chr5_3:68216067-68216086 None:intergenic 35.0%
! ATTTTTCTTCCATGCAGAGA+AGG + chr5_3:68216121-68216140 Msa0827150:CDS 35.0%
! TTTTTCTTCCATGCAGAGAA+GGG + chr5_3:68216122-68216141 Msa0827150:CDS 35.0%
GATCTTCTATGAGTGATTTC+AGG - chr5_3:68216270-68216289 None:intergenic 35.0%
ATTCTGTCAACCCTGTATAA+TGG - chr5_3:68216294-68216313 None:intergenic 35.0%
GAAGGTCGTGATATAAATTG+AGG - chr5_3:68216375-68216394 None:intergenic 35.0%
ACGACCTTCTAATGATATGA+GGG + chr5_3:68216386-68216405 Msa0827150:CDS 35.0%
ATGTCCCTCATATCATTAGA+AGG - chr5_3:68216393-68216412 None:intergenic 35.0%
ATCATTATCAGATCGATCTC+GGG - chr5_3:68216517-68216536 None:intergenic 35.0%
CATCATTATCAGATCGATCT+CGG - chr5_3:68216518-68216537 None:intergenic 35.0%
GTTAATGTTAACCATCCTAC+CGG - chr5_3:68216574-68216593 None:intergenic 35.0%
TTCAGACCTCCTTATAACAA+TGG + chr5_3:68216657-68216676 Msa0827150:CDS 35.0%
! GATTCAGATTTTCATGAGAG+AGG + chr5_3:68216753-68216772 Msa0827150:CDS 35.0%
GACTTTGATAGAAGGATCAA+GGG + chr5_3:68216795-68216814 Msa0827150:CDS 35.0%
ATGTTTCTTGTTCTTCTAGG+TGG - chr5_3:68216837-68216856 None:intergenic 35.0%
ACCTAGAAGAACAAGAAACA+TGG + chr5_3:68216836-68216855 Msa0827150:CDS 35.0%
TCCATGTTTCTTGTTCTTCT+AGG - chr5_3:68216840-68216859 None:intergenic 35.0%
CAAGAAGATAATTTCAGGCA+TGG + chr5_3:68216864-68216883 Msa0827150:CDS 35.0%
ATGATATTTCCAGAGTGAAG+AGG + chr5_3:68216916-68216935 Msa0827150:CDS 35.0%
! AAATCTTTTCCTCTTCACTC+TGG - chr5_3:68216928-68216947 None:intergenic 35.0%
AGAAGACTATTCGGATTAAG+GGG - chr5_3:68216961-68216980 None:intergenic 35.0%
CAGAAGACTATTCGGATTAA+GGG - chr5_3:68216962-68216981 None:intergenic 35.0%
TTAGCTTAAGCCATTCTAAG+TGG + chr5_3:68217086-68217105 Msa0827150:three_prime_UTR 35.0%
ATTTAGTTGGGACTTCAGTA+TGG + chr5_3:68217219-68217238 Msa0827150:three_prime_UTR 35.0%
TTTAGTTGGGACTTCAGTAT+GGG + chr5_3:68217220-68217239 Msa0827150:three_prime_UTR 35.0%
TGAACCTATAAACAAATGGC+AGG + chr5_3:68217269-68217288 Msa0827150:three_prime_UTR 35.0%
GAACCTATAAACAAATGGCA+GGG + chr5_3:68217270-68217289 Msa0827150:three_prime_UTR 35.0%
TATAAACAAATGGCAGGGTT+GGG + chr5_3:68217275-68217294 Msa0827150:three_prime_UTR 35.0%
TCATAGCAATGATAATCGGT+TGG - chr5_3:68217411-68217430 None:intergenic 35.0%
CGATTATCATTGCTATGACT+TGG + chr5_3:68217413-68217432 Msa0827150:three_prime_UTR 35.0%
! TAGATCTGTTTCTTGCCTTG+TGG + chr5_3:68211950-68211969 Msa0827150:intron 40.0%
! AGATCTGTTTCTTGCCTTGT+GGG + chr5_3:68211951-68211970 Msa0827150:intron 40.0%
! CCGCTACTTTATTTGAAGTG+AGG + chr5_3:68212360-68212379 Msa0827150:five_prime_UTR 40.0%
AGCGTTCTTATAGCGAAGAT+TGG + chr5_3:68212562-68212581 Msa0827150:five_prime_UTR 40.0%
GAAAACTCAAGCACTTCTCA+AGG + chr5_3:68212858-68212877 Msa0827150:five_prime_UTR 40.0%
AAGAAGCTTGAAGTGAAGGA+GGG - chr5_3:68212938-68212957 None:intergenic 40.0%
AAAGAAGCTTGAAGTGAAGG+AGG - chr5_3:68212939-68212958 None:intergenic 40.0%
TCCTTCACTTCAAGCTTCTT+TGG + chr5_3:68212938-68212957 Msa0827150:five_prime_UTR 40.0%
TCCAAAGAAGCTTGAAGTGA+AGG - chr5_3:68212942-68212961 None:intergenic 40.0%
! ACTTCAAGCTTCTTTGGAAG+AGG + chr5_3:68212944-68212963 Msa0827150:five_prime_UTR 40.0%
TCCAATGGTATCAGATAACC+CGG - chr5_3:68213051-68213070 None:intergenic 40.0%
ATCTGATACCATTGGAAACC+CGG + chr5_3:68213055-68213074 Msa0827150:five_prime_UTR 40.0%
TTCAATTACCGGGTTTCCAA+TGG - chr5_3:68213066-68213085 None:intergenic 40.0%
GAAGGAATCAAACCCTTCTT+TGG + chr5_3:68213155-68213174 Msa0827150:five_prime_UTR 40.0%
GAAAAGGTGATGCTCAATGA+AGG + chr5_3:68213195-68213214 Msa0827150:five_prime_UTR 40.0%
GGCAAATCCTGAACTCTTAT+TGG + chr5_3:68213251-68213270 Msa0827150:five_prime_UTR 40.0%
TTTGCAGCCAATAAGAGTTC+AGG - chr5_3:68213261-68213280 None:intergenic 40.0%
! CTCTTATTGGCTGCAAAAGA+TGG + chr5_3:68213264-68213283 Msa0827150:five_prime_UTR 40.0%
GTAGTACTTCCAGGAACTAT+AGG - chr5_3:68213357-68213376 None:intergenic 40.0%
GTTTCCGTCTGTTACAAGTT+CGG + chr5_3:68213404-68213423 Msa0827150:five_prime_UTR 40.0%
GGTTCTCCTTTCTCCATATT+GGG - chr5_3:68213447-68213466 None:intergenic 40.0%
AGGTTCTCCTTTCTCCATAT+TGG - chr5_3:68213448-68213467 None:intergenic 40.0%
CTGGGATCTGAATACTACAA+TGG + chr5_3:68213575-68213594 Msa0827150:five_prime_UTR 40.0%
! GCGTGTTTGATTTACAGACA+CGG - chr5_3:68213727-68213746 None:intergenic 40.0%
! GTTACTTCAACTGGTCTGTA+CGG + chr5_3:68213771-68213790 Msa0827150:five_prime_UTR 40.0%
GGACTTGGCAAACTAACAAT+AGG - chr5_3:68213909-68213928 None:intergenic 40.0%
AAGTTCTCATCATACGGTTC+TGG - chr5_3:68213981-68214000 None:intergenic 40.0%
GAGTACCACAACAAATCAGT+TGG + chr5_3:68214172-68214191 Msa0827150:five_prime_UTR 40.0%
! AACACAAGTTTTTGCAGAGG+CGG + chr5_3:68214259-68214278 Msa0827150:five_prime_UTR 40.0%
GTTAATACTGCTGTACACAC+AGG - chr5_3:68214302-68214321 None:intergenic 40.0%
AGTTTCCTCAAATTCTGAGC+AGG + chr5_3:68214400-68214419 Msa0827150:five_prime_UTR 40.0%
GAAATAGCAACTGTTACCAG+CGG - chr5_3:68214428-68214447 None:intergenic 40.0%
TCTAATCCTATGGTTACTCC+TGG + chr5_3:68214446-68214465 Msa0827150:five_prime_UTR 40.0%
TTCATCGGCAACTTCTTTCT+TGG - chr5_3:68214495-68214514 None:intergenic 40.0%
TCTGCAACCATCATGTTCAT+CGG - chr5_3:68214510-68214529 None:intergenic 40.0%
TGTTTCTCTTACCTCGCATA+TGG - chr5_3:68214771-68214790 None:intergenic 40.0%
AGACCAGTTAATGTTTCGCA+AGG + chr5_3:68215034-68215053 Msa0827150:five_prime_UTR 40.0%
GACCAGTTAATGTTTCGCAA+GGG + chr5_3:68215035-68215054 Msa0827150:five_prime_UTR 40.0%
TTCCCTTGCGAAACATTAAC+TGG - chr5_3:68215040-68215059 None:intergenic 40.0%
TATCACATGTCTTCCATCAG+TGG - chr5_3:68215131-68215150 None:intergenic 40.0%
! AGATGTTCTATGTGCTGATG+AGG + chr5_3:68215150-68215169 Msa0827150:five_prime_UTR 40.0%
! TGACTCAGATTTTCCGAAGA+TGG + chr5_3:68215205-68215224 Msa0827150:exon 40.0%
! TCAGATTTTCCGAAGATGGA+AGG + chr5_3:68215209-68215228 Msa0827150:exon 40.0%
TTAGCAGATCCTTCCATCTT+CGG - chr5_3:68215221-68215240 None:intergenic 40.0%
GTATTTCCTGACACACTTGA+TGG + chr5_3:68215383-68215402 Msa0827150:CDS 40.0%
GATGGTGACAAGTTATACAG+AGG + chr5_3:68215401-68215420 Msa0827150:CDS 40.0%
GTGACAAGTTATACAGAGGA+AGG + chr5_3:68215405-68215424 Msa0827150:CDS 40.0%
CTGAAAATCAAAGCAGGGAA+GGG - chr5_3:68215544-68215563 None:intergenic 40.0%
!! CTTCCCTGCTTTGATTTTCA+GGG + chr5_3:68215543-68215562 Msa0827150:intron 40.0%
CATCCCTGAAAATCAAAGCA+GGG - chr5_3:68215549-68215568 None:intergenic 40.0%
TCATCCCTGAAAATCAAAGC+AGG - chr5_3:68215550-68215569 None:intergenic 40.0%
CTGTCTCTTGAAAATCTGTG+GGG - chr5_3:68215589-68215608 None:intergenic 40.0%
GTCTGTCTCTTGAAAATCTG+TGG - chr5_3:68215591-68215610 None:intergenic 40.0%
! TCTAGATTGAATTTTGGGCG+TGG + chr5_3:68215634-68215653 Msa0827150:CDS 40.0%
GAATCTGAGCGTGAATATTC+TGG + chr5_3:68215694-68215713 Msa0827150:CDS 40.0%
!!! AATATTTTGACCTTGCGCCA+CGG - chr5_3:68215750-68215769 None:intergenic 40.0%
TGCTATTGCTGATACTGATC+TGG + chr5_3:68215774-68215793 Msa0827150:CDS 40.0%
! GATCTGGAGTACAATAATGC+TGG + chr5_3:68215790-68215809 Msa0827150:CDS 40.0%
GGTAGAAAGCCATTGAATGA+TGG + chr5_3:68215844-68215863 Msa0827150:CDS 40.0%
GCTCATATATTGCACCAAGA+AGG + chr5_3:68215866-68215885 Msa0827150:CDS 40.0%
CATATATTGCACCAAGAAGG+AGG + chr5_3:68215869-68215888 Msa0827150:CDS 40.0%
AGGAAGAGATGGCATTCAAA+TGG + chr5_3:68215903-68215922 Msa0827150:CDS 40.0%
GGAAGAGATGGCATTCAAAT+GGG + chr5_3:68215904-68215923 Msa0827150:CDS 40.0%
ATGGCATTCAAATGGGTCAT+AGG + chr5_3:68215911-68215930 Msa0827150:CDS 40.0%
TCCATTCCCTCAAATTGTTG+GGG - chr5_3:68216066-68216085 None:intergenic 40.0%
CATCCATTCCCTCAAATTGT+TGG - chr5_3:68216068-68216087 None:intergenic 40.0%
CAACAATTTGAGGGAATGGA+TGG + chr5_3:68216066-68216085 Msa0827150:CDS 40.0%
AATTTGAGGGAATGGATGGT+CGG + chr5_3:68216070-68216089 Msa0827150:CDS 40.0%
! TTTTCTTCCATGCAGAGAAG+GGG + chr5_3:68216123-68216142 Msa0827150:CDS 40.0%
ATCTGGAGATCTTCTTCTTG+GGG - chr5_3:68216232-68216251 None:intergenic 40.0%
CATCTGGAGATCTTCTTCTT+GGG - chr5_3:68216233-68216252 None:intergenic 40.0%
! AGAAGATCTCCAGATGGTTT+TGG + chr5_3:68216237-68216256 Msa0827150:CDS 40.0%
CACGACCTTCTAATGATATG+AGG + chr5_3:68216385-68216404 Msa0827150:CDS 40.0%
CTATTGGAAATGACAGACCT+TGG - chr5_3:68216441-68216460 None:intergenic 40.0%
! CAAGGTCTGTCATTTCCAAT+AGG + chr5_3:68216439-68216458 Msa0827150:CDS 40.0%
ATTTCCAATAGGAGTCCATC+TGG + chr5_3:68216450-68216469 Msa0827150:CDS 40.0%
TCATTATCAGATCGATCTCG+GGG - chr5_3:68216516-68216535 None:intergenic 40.0%
ATGAGAGAGGCAATAACTTG+AGG + chr5_3:68216766-68216785 Msa0827150:CDS 40.0%
TGAGAGAGGCAATAACTTGA+GGG + chr5_3:68216767-68216786 Msa0827150:CDS 40.0%
AGGCAATAACTTGAGGGAAA+GGG + chr5_3:68216773-68216792 Msa0827150:CDS 40.0%
GGACTTTGATAGAAGGATCA+AGG + chr5_3:68216794-68216813 Msa0827150:CDS 40.0%
TTGATAGAAGGATCAAGGGT+AGG + chr5_3:68216799-68216818 Msa0827150:CDS 40.0%
ATCAAGGGTAGGAATGGAAA+TGG + chr5_3:68216810-68216829 Msa0827150:CDS 40.0%
TCAAGGGTAGGAATGGAAAT+GGG + chr5_3:68216811-68216830 Msa0827150:CDS 40.0%
GAAGATAATTTCAGGCATGG+TGG + chr5_3:68216867-68216886 Msa0827150:CDS 40.0%
GCAGAAGACTATTCGGATTA+AGG - chr5_3:68216963-68216982 None:intergenic 40.0%
TAATCCGAATAGTCTTCTGC+TGG + chr5_3:68216963-68216982 Msa0827150:three_prime_UTR 40.0%
TAAGCTAAAGCAATGCAGCA+AGG - chr5_3:68217074-68217093 None:intergenic 40.0%
! CAACCCTGCCATTTGTTTAT+AGG - chr5_3:68217276-68217295 None:intergenic 40.0%
CTATAAACAAATGGCAGGGT+TGG + chr5_3:68217274-68217293 Msa0827150:three_prime_UTR 40.0%
! TTATTGGAGTGCTTTGCTGT+TGG + chr5_3:68217348-68217367 Msa0827150:three_prime_UTR 40.0%
!!! CTTTGCTGTTGGTTCTTTTC+TGG + chr5_3:68217359-68217378 Msa0827150:three_prime_UTR 40.0%
!!! TGCTATGACTTGGTCAGTTT+TGG + chr5_3:68217423-68217442 Msa0827150:three_prime_UTR 40.0%
TGCAGAAAAGTAAACAGACG+TGG + chr5_3:68217500-68217519 Msa0827150:three_prime_UTR 40.0%
! CTTTCTTCGCAGTTGTTTCG+TGG + chr5_3:68211669-68211688 Msa0827150:five_prime_UTR 45.0%
ATACCGTAAATTGCAGGCCA+CGG - chr5_3:68211869-68211888 None:intergenic 45.0%
! TCTTGCCTTGTGGGTTTTCT+CGG + chr5_3:68211960-68211979 Msa0827150:intron 45.0%
TGAAGTGAGGCTAAGGATAG+TGG + chr5_3:68212373-68212392 Msa0827150:five_prime_UTR 45.0%
ATTGGAATCATGCCCATCTC+AGG + chr5_3:68212580-68212599 Msa0827150:five_prime_UTR 45.0%
AGTGGGATAAAGTCCTTTGC+TGG + chr5_3:68212726-68212745 Msa0827150:five_prime_UTR 45.0%
GTGGGATAAAGTCCTTTGCT+GGG + chr5_3:68212727-68212746 Msa0827150:five_prime_UTR 45.0%
ATCACTAAACTGCCCAGCAA+AGG - chr5_3:68212742-68212761 None:intergenic 45.0%
CAGGTGTGCCAATCAAGAAA+AGG + chr5_3:68212769-68212788 Msa0827150:five_prime_UTR 45.0%
GTGTGCCAATCAAGAAAAGG+AGG + chr5_3:68212772-68212791 Msa0827150:five_prime_UTR 45.0%
! GGGTACCTCCTTTTCTTGAT+TGG - chr5_3:68212780-68212799 None:intergenic 45.0%
AAGGAGACCGAATCAAAGGA+GGG - chr5_3:68212800-68212819 None:intergenic 45.0%
AACTCAGTTTCTTCCGTACG+AGG - chr5_3:68212828-68212847 None:intergenic 45.0%
CAGGTGCACCTATCAAGAAA+AGG + chr5_3:68212907-68212926 Msa0827150:five_prime_UTR 45.0%
GTGCACCTATCAAGAAAAGG+AGG + chr5_3:68212910-68212929 Msa0827150:five_prime_UTR 45.0%
! GGGAACCTCCTTTTCTTGAT+AGG - chr5_3:68212918-68212937 None:intergenic 45.0%
! AGCTTCTTTGGAAGAGGCTT+CGG + chr5_3:68212950-68212969 Msa0827150:five_prime_UTR 45.0%
AAGGGTTGAACTCAGTGATG+TGG - chr5_3:68213015-68213034 None:intergenic 45.0%
GTTCTTTGCTTATGCCGAAG+CGG + chr5_3:68213133-68213152 Msa0827150:five_prime_UTR 45.0%
GATGGTCTAGCACTTAGCAT+TGG + chr5_3:68213282-68213301 Msa0827150:five_prime_UTR 45.0%
! TCTAGCACTTAGCATTGGAG+CGG + chr5_3:68213287-68213306 Msa0827150:five_prime_UTR 45.0%
CAAGAGAGTCCTATAGTTCC+TGG + chr5_3:68213345-68213364 Msa0827150:five_prime_UTR 45.0%
TACTCGTGTGCATTCTAGCA+GGG + chr5_3:68213548-68213567 Msa0827150:five_prime_UTR 45.0%
ACAATGGATGCATGGGATGA+AGG + chr5_3:68213591-68213610 Msa0827150:five_prime_UTR 45.0%
CAATGGATGCATGGGATGAA+GGG + chr5_3:68213592-68213611 Msa0827150:five_prime_UTR 45.0%
AAACAGTTTACGTGCTCGAC+TGG + chr5_3:68213681-68213700 Msa0827150:five_prime_UTR 45.0%
AACAGTTTACGTGCTCGACT+GGG + chr5_3:68213682-68213701 Msa0827150:five_prime_UTR 45.0%
TTTACAGACACGGCACTTGT+TGG - chr5_3:68213717-68213736 None:intergenic 45.0%
CGGACAGCAGTTTAAATGTG+CGG + chr5_3:68213791-68213810 Msa0827150:five_prime_UTR 45.0%
GGCGAAAGACATAGATTACG+TGG - chr5_3:68213819-68213838 None:intergenic 45.0%
TCTTGACTACCCTCATGACT+TGG - chr5_3:68214134-68214153 None:intergenic 45.0%
!! TGTGGTACTCTCTGCTGTTT+TGG - chr5_3:68214162-68214181 None:intergenic 45.0%
TTCAAGCCAGGAGTAACCAT+AGG - chr5_3:68214455-68214474 None:intergenic 45.0%
GAAGTTGCCGATGAACATGA+TGG + chr5_3:68214500-68214519 Msa0827150:five_prime_UTR 45.0%
CTACAGCAACAGTTACAGCA+TGG - chr5_3:68214667-68214686 None:intergenic 45.0%
ATGGTATCCTCCACTTTGGA+AGG - chr5_3:68214752-68214771 None:intergenic 45.0%
GCATATGGTATCCTCCACTT+TGG - chr5_3:68214756-68214775 None:intergenic 45.0%
GAAACAGAACATCCTGACTC+AGG + chr5_3:68214785-68214804 Msa0827150:five_prime_UTR 45.0%
TAAACCAGTGGAGAAAGGAG+TGG + chr5_3:68214820-68214839 Msa0827150:five_prime_UTR 45.0%
TTATCCCACTTCATCTCGTG+TGG + chr5_3:68214856-68214875 Msa0827150:five_prime_UTR 45.0%
TTTACTAGGGGATGACGAAC+TGG - chr5_3:68215315-68215334 None:intergenic 45.0%
CGTCATCCCCTAGTAAAACT+AGG + chr5_3:68215318-68215337 Msa0827150:CDS 45.0%
TTGTCACCATCAAGTGTGTC+AGG - chr5_3:68215392-68215411 None:intergenic 45.0%
CCTGAAAATCAAAGCAGGGA+AGG - chr5_3:68215545-68215564 None:intergenic 45.0%
!! CCTTCCCTGCTTTGATTTTC+AGG + chr5_3:68215542-68215561 Msa0827150:intron 45.0%
! TTGAATTTTGGGCGTGGTAG+AGG + chr5_3:68215640-68215659 Msa0827150:CDS 45.0%
AGAGGAAGAGTTAATAGCCG+AGG + chr5_3:68215658-68215677 Msa0827150:CDS 45.0%
GGTCCAAATCAACAATACCG+TGG + chr5_3:68215730-68215749 Msa0827150:CDS 45.0%
AGTAGATGTATTGGAGGGGA+TGG + chr5_3:68215958-68215977 Msa0827150:CDS 45.0%
TACACGTCCCCAACAATTTG+AGG + chr5_3:68216056-68216075 Msa0827150:CDS 45.0%
ACACGTCCCCAACAATTTGA+GGG + chr5_3:68216057-68216076 Msa0827150:CDS 45.0%
TCCCCAACAATTTGAGGGAA+TGG + chr5_3:68216062-68216081 Msa0827150:CDS 45.0%
!! ATGGATGGTCGGTTTTCAAG+AGG + chr5_3:68216081-68216100 Msa0827150:CDS 45.0%
!! GGTTTTCAAGAGGAAGAGGA+CGG + chr5_3:68216091-68216110 Msa0827150:CDS 45.0%
!! GTTTTCAAGAGGAAGAGGAC+GGG + chr5_3:68216092-68216111 Msa0827150:CDS 45.0%
!! TTTTCAAGAGGAAGAGGACG+GGG + chr5_3:68216093-68216112 Msa0827150:CDS 45.0%
CAAAATCACCCATCAGATCG+AGG + chr5_3:68216166-68216185 Msa0827150:CDS 45.0%
TCTAGGAGATGTCCATTGAC+CGG - chr5_3:68216202-68216221 None:intergenic 45.0%
GTCAATGGACATCTCCTAGA+AGG + chr5_3:68216202-68216221 Msa0827150:CDS 45.0%
AATGGACATCTCCTAGAAGG+AGG + chr5_3:68216205-68216224 Msa0827150:CDS 45.0%
CCATCTGGAGATCTTCTTCT+TGG - chr5_3:68216234-68216253 None:intergenic 45.0%
CCAAGAAGAAGATCTCCAGA+TGG + chr5_3:68216231-68216250 Msa0827150:CDS 45.0%
!!! AGATCTCCAGATGGTTTTGG+TGG + chr5_3:68216240-68216259 Msa0827150:CDS 45.0%
AGTGAAAACAGGTCGATCAG+GGG - chr5_3:68216322-68216341 None:intergenic 45.0%
CAGTGAAAACAGGTCGATCA+GGG - chr5_3:68216323-68216342 None:intergenic 45.0%
! CTGATCGACCTGTTTTCACT+GGG + chr5_3:68216322-68216341 Msa0827150:CDS 45.0%
! TGATCGACCTGTTTTCACTG+GGG + chr5_3:68216323-68216342 Msa0827150:CDS 45.0%
! TCTACCAGATGGACTCCTAT+TGG - chr5_3:68216457-68216476 None:intergenic 45.0%
CAATGGTGAAGGAAATGGTG+AGG + chr5_3:68216593-68216612 Msa0827150:CDS 45.0%
!! AGGAGGTTTGGTGAAAGAAG+AGG + chr5_3:68216621-68216640 Msa0827150:CDS 45.0%
GAGGCAATAACTTGAGGGAA+AGG + chr5_3:68216772-68216791 Msa0827150:CDS 45.0%
GGGAAAGGGACTTTGATAGA+AGG + chr5_3:68216787-68216806 Msa0827150:CDS 45.0%
AGAAGGATCAAGGGTAGGAA+TGG + chr5_3:68216804-68216823 Msa0827150:CDS 45.0%
TCCTCCAGCAGAAGACTATT+CGG - chr5_3:68216970-68216989 None:intergenic 45.0%
GCTTAAGCCATTCTAAGTGG+TGG + chr5_3:68217089-68217108 Msa0827150:three_prime_UTR 45.0%
GCAGATTGTCTTGTCAAGGA+AGG + chr5_3:68217162-68217181 Msa0827150:three_prime_UTR 45.0%
CTCTCTGTCTGATTCTTCCG+TGG + chr5_3:68211849-68211868 Msa0827150:intron 50.0%
CTTCCGTGGCCTGCAATTTA+CGG + chr5_3:68211863-68211882 Msa0827150:intron 50.0%
GTGAACCGAGAAAACCCACA+AGG - chr5_3:68211968-68211987 None:intergenic 50.0%
!! GGAGGTACCCTCCTTTGATT+CGG + chr5_3:68212790-68212809 Msa0827150:five_prime_UTR 50.0%
GAAGGAGACCGAATCAAAGG+AGG - chr5_3:68212801-68212820 None:intergenic 50.0%
GGTGAAGGAGACCGAATCAA+AGG - chr5_3:68212804-68212823 None:intergenic 50.0%
TCAGTTTCTTCCGTACGAGG+AGG - chr5_3:68212825-68212844 None:intergenic 50.0%
TTTGGAAGAGGCTTCGGTTC+AGG + chr5_3:68212956-68212975 Msa0827150:five_prime_UTR 50.0%
ACCCTTTCTACCAGTTCTGC+CGG + chr5_3:68213029-68213048 Msa0827150:five_prime_UTR 50.0%
ATCAGATAACCCGGCAGAAC+TGG - chr5_3:68213042-68213061 None:intergenic 50.0%
GCCGGGTTATCTGATACCAT+TGG + chr5_3:68213047-68213066 Msa0827150:five_prime_UTR 50.0%
TTTGCTTATGCCGAAGCGGA+AGG + chr5_3:68213137-68213156 Msa0827150:five_prime_UTR 50.0%
GGGTTTGATTCCTTCCGCTT+CGG - chr5_3:68213150-68213169 None:intergenic 50.0%
CTACTCGTGTGCATTCTAGC+AGG + chr5_3:68213547-68213566 Msa0827150:five_prime_UTR 50.0%
TGCATTCTAGCAGGGCAAAC+TGG + chr5_3:68213556-68213575 Msa0827150:five_prime_UTR 50.0%
GCATTCTAGCAGGGCAAACT+GGG + chr5_3:68213557-68213576 Msa0827150:five_prime_UTR 50.0%
TGAACCTAGAAGACGGGCAT+TGG - chr5_3:68214024-68214043 None:intergenic 50.0%
CAACATGACTGGCACTGTCA+TGG - chr5_3:68214234-68214253 None:intergenic 50.0%
GTACACACAGGTTTCACAGC+AGG - chr5_3:68214290-68214309 None:intergenic 50.0%
CGGAACCTGCTCAGAATTTG+AGG - chr5_3:68214408-68214427 None:intergenic 50.0%
AAATTCTGAGCAGGTTCCGC+TGG + chr5_3:68214409-68214428 Msa0827150:five_prime_UTR 50.0%
ACCACTGGAACCTTCCAAAG+TGG + chr5_3:68214739-68214758 Msa0827150:five_prime_UTR 50.0%
! TCCACTTTGGAAGGTTCCAG+TGG - chr5_3:68214743-68214762 None:intergenic 50.0%
ACTGGAACCTTCCAAAGTGG+AGG + chr5_3:68214742-68214761 Msa0827150:five_prime_UTR 50.0%
AGTGGAGGATACCATATGCG+AGG + chr5_3:68214757-68214776 Msa0827150:five_prime_UTR 50.0%
TCCACCACACGAGATGAAGT+GGG - chr5_3:68214863-68214882 None:intergenic 50.0%
TTCCACCACACGAGATGAAG+TGG - chr5_3:68214864-68214883 None:intergenic 50.0%
TGTGTGTGTGCAAGAGTCGA+TGG + chr5_3:68214979-68214998 Msa0827150:five_prime_UTR 50.0%
TGTGTGCAAGAGTCGATGGA+TGG + chr5_3:68214983-68215002 Msa0827150:five_prime_UTR 50.0%
CCATCAGTGGCTTGATTGCA+AGG - chr5_3:68215118-68215137 None:intergenic 50.0%
CCTTGCAATCAAGCCACTGA+TGG + chr5_3:68215115-68215134 Msa0827150:five_prime_UTR 50.0%
ACATCTCTTCCAGCTCGAGT+TGG - chr5_3:68215365-68215384 None:intergenic 50.0%
AGAGTTAATAGCCGAGGTCG+TGG + chr5_3:68215664-68215683 Msa0827150:CDS 50.0%
! GCGCCACGGTATTGTTGATT+TGG - chr5_3:68215736-68215755 None:intergenic 50.0%
ATCAACAATACCGTGGCGCA+AGG + chr5_3:68215737-68215756 Msa0827150:CDS 50.0%
GTTCAGACTTAGGTGGCATG+AGG + chr5_3:68215980-68215999 Msa0827150:CDS 50.0%
!! GGTCGGTTTTCAAGAGGAAG+AGG + chr5_3:68216087-68216106 Msa0827150:CDS 50.0%
GAACGACTCCTCGATCTGAT+GGG - chr5_3:68216177-68216196 None:intergenic 50.0%
TGAACGACTCCTCGATCTGA+TGG - chr5_3:68216178-68216197 None:intergenic 50.0%
CTAGGAGATGTCCATTGACC+GGG - chr5_3:68216201-68216220 None:intergenic 50.0%
GGATGTCCACCAAAACCATC+TGG - chr5_3:68216249-68216268 None:intergenic 50.0%
CCAGTGAAAACAGGTCGATC+AGG - chr5_3:68216324-68216343 None:intergenic 50.0%
! CCTGATCGACCTGTTTTCAC+TGG + chr5_3:68216321-68216340 Msa0827150:CDS 50.0%
ACTCTCTCCCCAGTGAAAAC+AGG - chr5_3:68216333-68216352 None:intergenic 50.0%
! TGTTTTCACTGGGGAGAGAG+TGG + chr5_3:68216332-68216351 Msa0827150:CDS 50.0%
!! TGAGGGACATTGACTCTGCA+AGG + chr5_3:68216403-68216422 Msa0827150:CDS 50.0%
!! GAGGGACATTGACTCTGCAA+GGG + chr5_3:68216404-68216423 Msa0827150:CDS 50.0%
! ATTGACTCTGCAAGGGACCA+TGG + chr5_3:68216411-68216430 Msa0827150:CDS 50.0%
TGACAGACCTTGGATGACCA+TGG - chr5_3:68216431-68216450 None:intergenic 50.0%
ACCATCCTACCGGAATGCAT+AGG - chr5_3:68216564-68216583 None:intergenic 50.0%
GTGAAGGAAATGGTGAGGAG+AGG + chr5_3:68216598-68216617 Msa0827150:CDS 50.0%
AAGGAAATGGTGAGGAGAGG+AGG + chr5_3:68216601-68216620 Msa0827150:CDS 50.0%
!! TCAGGCATGGTGGACAAGTT+TGG + chr5_3:68216877-68216896 Msa0827150:CDS 50.0%
TCCGAATAGTCTTCTGCTGG+AGG + chr5_3:68216966-68216985 Msa0827150:three_prime_UTR 50.0%
AGTCTTCTGCTGGAGGACAA+TGG + chr5_3:68216973-68216992 Msa0827150:three_prime_UTR 50.0%
GCGAGCAGATTGTCTTGTCA+AGG + chr5_3:68217158-68217177 Msa0827150:three_prime_UTR 50.0%
AAACAAATGGCAGGGTTGGG+TGG + chr5_3:68217278-68217297 Msa0827150:three_prime_UTR 50.0%
ACCTCTTCACGGCCTGAGAT+GGG - chr5_3:68212595-68212614 None:intergenic 55.0%
GTCTCCTTCACCTCCTCGTA+CGG + chr5_3:68212812-68212831 Msa0827150:five_prime_UTR 55.0%
TCTTCCGTACGAGGAGGTGA+AGG - chr5_3:68212819-68212838 None:intergenic 55.0%
CCCGGCAGAACTGGTAGAAA+GGG - chr5_3:68213033-68213052 None:intergenic 55.0%
CCCTTTCTACCAGTTCTGCC+GGG + chr5_3:68213030-68213049 Msa0827150:five_prime_UTR 55.0%
ACCCGGCAGAACTGGTAGAA+AGG - chr5_3:68213034-68213053 None:intergenic 55.0%
! ACAGACACGGCACTTGTTGG+TGG - chr5_3:68213714-68213733 None:intergenic 55.0%
GCATCACCAGCAGTAGCTGT+CGG - chr5_3:68213930-68213949 None:intergenic 55.0%
GAAGCCAATGCCCGTCTTCT+AGG + chr5_3:68214017-68214036 Msa0827150:five_prime_UTR 55.0%
CCACTGTCTCGTGCATCAGT+AGG - chr5_3:68214551-68214570 None:intergenic 55.0%
CCTACTGATGCACGAGACAG+TGG + chr5_3:68214548-68214567 Msa0827150:five_prime_UTR 55.0%
GATGCACGAGACAGTGGTGT+AGG + chr5_3:68214554-68214573 Msa0827150:five_prime_UTR 55.0%
TGGTGAGGTTCGAGAACCAC+TGG + chr5_3:68214724-68214743 Msa0827150:five_prime_UTR 55.0%
ACCAGTGGAGAAAGGAGTGG+TGG + chr5_3:68214823-68214842 Msa0827150:five_prime_UTR 55.0%
ACCACCACTCCTTTCTCCAC+TGG - chr5_3:68214827-68214846 None:intergenic 55.0%
TCCCACTTCATCTCGTGTGG+TGG + chr5_3:68214859-68214878 Msa0827150:five_prime_UTR 55.0%
GGCAGCGATCTGCCTGAAAT+AGG - chr5_3:68215344-68215363 None:intergenic 55.0%
ATTCCCAGTCACCACGACCT+CGG - chr5_3:68215678-68215697 None:intergenic 55.0%
TCACCAGGAGGAGGAAGAGA+TGG + chr5_3:68215892-68215911 Msa0827150:CDS 55.0%
ATGCCATCTCTTCCTCCTCC+TGG - chr5_3:68215898-68215917 None:intergenic 55.0%
GGAGGGGATGGTTCAGACTT+AGG + chr5_3:68215970-68215989 Msa0827150:CDS 55.0%
GGGGATGGTTCAGACTTAGG+TGG + chr5_3:68215973-68215992 Msa0827150:CDS 55.0%
TCTTCCATGCAGAGAAGGGG+TGG + chr5_3:68216126-68216145 Msa0827150:CDS 55.0%
AAGACCACCCCTTCTCTGCA+TGG - chr5_3:68216133-68216152 None:intergenic 55.0%
AGATCGAGGAGTCGTTCACC+CGG + chr5_3:68216180-68216199 Msa0827150:CDS 55.0%
CTTCTTGGGGACCTCCTTCT+AGG - chr5_3:68216219-68216238 None:intergenic 55.0%
GAGAGAGTGGTGAGGAGACA+TGG + chr5_3:68216345-68216364 Msa0827150:CDS 55.0%
CAAGGGACCATGGTCATCCA+AGG + chr5_3:68216421-68216440 Msa0827150:CDS 55.0%
AGTGGAGGGCCTATGCATTC+CGG + chr5_3:68216552-68216571 Msa0827150:CDS 55.0%
GCCTATGCATTCCGGTAGGA+TGG + chr5_3:68216560-68216579 Msa0827150:CDS 55.0%
GAAATGGTGAGGAGAGGAGG+AGG + chr5_3:68216604-68216623 Msa0827150:CDS 55.0%
GGAGGTCTGAAAGAACGCAC+AGG - chr5_3:68216648-68216667 None:intergenic 55.0%
CACCTCTTCACGGCCTGAGA+TGG - chr5_3:68212596-68212615 None:intergenic 60.0%
CCAGCAGTAGCTGTCGGACT+TGG - chr5_3:68213924-68213943 None:intergenic 60.0%
CCAAGTCCGACAGCTACTGC+TGG + chr5_3:68213921-68213940 Msa0827150:five_prime_UTR 60.0%
AGATCGCTGCCAACTCGAGC+TGG + chr5_3:68215353-68215372 Msa0827150:CDS 60.0%
ATAGCCGAGGTCGTGGTGAC+TGG + chr5_3:68215671-68215690 Msa0827150:CDS 60.0%
TAGCCGAGGTCGTGGTGACT+GGG + chr5_3:68215672-68215691 Msa0827150:CDS 60.0%
GCACCAAGAAGGAGGTCACC+AGG + chr5_3:68215877-68215896 Msa0827150:CDS 60.0%
CCTCCTGGTGACCTCCTTCT+TGG - chr5_3:68215883-68215902 None:intergenic 60.0%
CCAAGAAGGAGGTCACCAGG+AGG + chr5_3:68215880-68215899 Msa0827150:CDS 60.0%
AGAAGGAGGTCACCAGGAGG+AGG + chr5_3:68215883-68215902 Msa0827150:CDS 60.0%
CAAGAGGAAGAGGACGGGGT+AGG + chr5_3:68216097-68216116 Msa0827150:CDS 60.0%
GGAGTCGTTCACCCGGTCAA+TGG + chr5_3:68216187-68216206 Msa0827150:CDS 60.0%
TCACTGGGGAGAGAGTGGTG+AGG + chr5_3:68216337-68216356 Msa0827150:CDS 60.0%
GAGGGCCTATGCATTCCGGT+AGG + chr5_3:68216556-68216575 Msa0827150:CDS 60.0%
GGTGAGGAGAGGAGGAGGTT+TGG + chr5_3:68216609-68216628 Msa0827150:CDS 60.0%
GCCCATCTCAGGCCGTGAAG+AGG + chr5_3:68212591-68212610 Msa0827150:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 68211546 68217584 68211546 ID=Msa0827150;Name=Msa0827150
chr5_3 mRNA 68211546 68217584 68211546 ID=Msa0827150-mRNA-1;Parent=Msa0827150;Name=Msa0827150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=2971|1|1|1|1|0.5|4|634|529
chr5_3 exon 68211546 68211761 68211546 ID=Msa0827150-mRNA-1:exon:21369;Parent=Msa0827150-mRNA-1
chr5_3 exon 68212356 68212612 68212356 ID=Msa0827150-mRNA-1:exon:21370;Parent=Msa0827150-mRNA-1
chr5_3 exon 68212726 68215426 68212726 ID=Msa0827150-mRNA-1:exon:21371;Parent=Msa0827150-mRNA-1
chr5_3 exon 68215564 68217584 68215564 ID=Msa0827150-mRNA-1:exon:21372;Parent=Msa0827150-mRNA-1
chr5_3 five_prime_UTR 68211546 68211761 68211546 ID=Msa0827150-mRNA-1:five_prime_utr;Parent=Msa0827150-mRNA-1
chr5_3 five_prime_UTR 68212356 68212612 68212356 ID=Msa0827150-mRNA-1:five_prime_utr;Parent=Msa0827150-mRNA-1
chr5_3 five_prime_UTR 68212726 68215223 68212726 ID=Msa0827150-mRNA-1:five_prime_utr;Parent=Msa0827150-mRNA-1
chr5_3 CDS 68215224 68215426 68215224 ID=Msa0827150-mRNA-1:cds;Parent=Msa0827150-mRNA-1
chr5_3 CDS 68215564 68216950 68215564 ID=Msa0827150-mRNA-1:cds;Parent=Msa0827150-mRNA-1
chr5_3 three_prime_UTR 68216951 68217584 68216951 ID=Msa0827150-mRNA-1:three_prime_utr;Parent=Msa0827150-mRNA-1
Gene Sequence

>Msa0827150

ATGGAAGGATCTGCTAATACTGAAGATATAACCAAAGATGTTACTAACGGTAGTAATCAAGGAAGAATCATAGATCTGTCACGAGCTGCCAGTTCGTCATCCCCTAGTAAAACTAGGCCTATTTCAGGCAGATCGCTGCCAACTCGAGCTGGAAGAGATGTATTTCCTGACACACTTGATGGTGACAAGTTATACAGAGGAAGGGATGAAGTTTACATTGATGGTCCCCACAGATTTTCAAGAGACAGACATCAAGACATGTCCACTAGAAATTCTAGATTGAATTTTGGGCGTGGTAGAGGAAGAGTTAATAGCCGAGGTCGTGGTGACTGGGAATCTGAGCGTGAATATTCTGGTGAATTTTACAATGGTCCAAATCAACAATACCGTGGCGCAAGGTCAAAATATTCATCTGCTATTGCTGATACTGATCTGGAGTACAATAATGCTGGTCCTGATGATTCATATGTTAATGGTCGGTTAGGTAGAAAGCCATTGAATGATGGCTCATATATTGCACCAAGAAGGAGGTCACCAGGAGGAGGAAGAGATGGCATTCAAATGGGTCATAGGAATCAAAGACCTGTTAGTCCTAATAGTAGATGTATTGGAGGGGATGGTTCAGACTTAGGTGGCATGAGGCATAGTGAGAAATTTATGAGAGGTTTTAATGATGATACTCTAGATTCTGTGTATACACGTCCCCAACAATTTGAGGGAATGGATGGTCGGTTTTCAAGAGGAAGAGGACGGGGTAGGAATTTTTCTTCCATGCAGAGAAGGGGTGGTCTTTCTCGAATGCGTTCAAAATCACCCATCAGATCGAGGAGTCGTTCACCCGGTCAATGGACATCTCCTAGAAGGAGGTCCCCAAGAAGAAGATCTCCAGATGGTTTTGGTGGACATCCTGAAATCACTCATAGAAGATCACCATTATACAGGGTTGACAGAATGAGATCCCCTGATCGACCTGTTTTCACTGGGGAGAGAGTGGTGAGGAGACATGGCTCACCTCAATTTATATCACGACCTTCTAATGATATGAGGGACATTGACTCTGCAAGGGACCATGGTCATCCAAGGTCTGTCATTTCCAATAGGAGTCCATCTGGTAGAATTTTAATCAGAAACAGAAGATTTGATGTTGTAGATCCCCGAGATCGATCTGATAATGATGATGAATACTTCGGTAGTGGAGGGCCTATGCATTCCGGTAGGATGGTTAACATTAACAATGGTGAAGGAAATGGTGAGGAGAGGAGGAGGTTTGGTGAAAGAAGAGGTCCTGTGCGTTCTTTCAGACCTCCTTATAACAATGGTAATAACAATGTTGGTGAGAACTTTCATCTAAATGCTGAAGACGGACCTAGACATTATAGATTCTGTTCAGATGATTCAGATTTTCATGAGAGAGGCAATAACTTGAGGGAAAGGGACTTTGATAGAAGGATCAAGGGTAGGAATGGAAATGGGCCACCTAGAAGAACAAGAAACATGGATGAGCAAGAAGATAATTTCAGGCATGGTGGACAAGTTTGGAGTGATGACAGTTTTGATGATATTTCCAGAGTGAAGAGGAAAAGATTTTGA
Protein sequence

>Msa0827150

MEGSANTEDITKDVTNGSNQGRIIDLSRAASSSSPSKTRPISGRSLPTRAGRDVFPDTLDGDKLYRGRDEVYIDGPHRFSRDRHQDMSTRNSRLNFGRGRGRVNSRGRGDWESEREYSGEFYNGPNQQYRGARSKYSSAIADTDLEYNNAGPDDSYVNGRLGRKPLNDGSYIAPRRRSPGGGRDGIQMGHRNQRPVSPNSRCIGGDGSDLGGMRHSEKFMRGFNDDTLDSVYTRPQQFEGMDGRFSRGRGRGRNFSSMQRRGGLSRMRSKSPIRSRSRSPGQWTSPRRRSPRRRSPDGFGGHPEITHRRSPLYRVDRMRSPDRPVFTGERVVRRHGSPQFISRPSNDMRDIDSARDHGHPRSVISNRSPSGRILIRNRRFDVVDPRDRSDNDDEYFGSGGPMHSGRMVNINNGEGNGEERRRFGERRGPVRSFRPPYNNGNNNVGENFHLNAEDGPRHYRFCSDDSDFHERGNNLRERDFDRRIKGRNGNGPPRRTRNMDEQEDNFRHGGQVWSDDSFDDISRVKRKRF*