Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475500 | XP_003602894.2 | 96.828 | 662 | 21 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475500 | sp|O04492|DRB1_ARATH | 64.362 | 188 | 66 | 1 | 12 | 199 | 9 | 195 | 3.54e-77 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475500 | G7J4K9 | 96.828 | 662 | 21 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1310 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003300 | Msa0475500 | 0.804401 | 2.198546e-49 | -8.615850e-47 |
| Msa0006510 | Msa0475500 | 0.851526 | 8.378241e-61 | -8.615850e-47 |
| Msa0015670 | Msa0475500 | 0.865884 | 4.270279e-65 | -8.615850e-47 |
| Msa0039570 | Msa0475500 | 0.806550 | 7.791977e-50 | -8.615850e-47 |
| Msa0041860 | Msa0475500 | 0.830574 | 2.720022e-55 | -8.615850e-47 |
| Msa0042550 | Msa0475500 | 0.821174 | 4.645991e-53 | -8.615850e-47 |
| Msa0045550 | Msa0475500 | 0.830233 | 3.296228e-55 | -8.615850e-47 |
| Msa0045910 | Msa0475500 | 0.832871 | 7.379815e-56 | -8.615850e-47 |
| Msa0050930 | Msa0475500 | 0.824488 | 7.854207e-54 | -8.615850e-47 |
| Msa0055070 | Msa0475500 | 0.845002 | 5.326428e-59 | -8.615850e-47 |
| Msa0056450 | Msa0475500 | 0.825810 | 3.827053e-54 | -8.615850e-47 |
| Msa0064110 | Msa0475500 | 0.809680 | 1.679002e-50 | -8.615850e-47 |
| Msa0076700 | Msa0475500 | 0.839141 | 1.892296e-57 | -8.615850e-47 |
| Msa0077030 | Msa0475500 | 0.807331 | 5.326223e-50 | -8.615850e-47 |
| Msa0077450 | Msa0475500 | 0.840054 | 1.095392e-57 | -8.615850e-47 |
| Msa0087220 | Msa0475500 | 0.814740 | 1.320525e-51 | -8.615850e-47 |
| Msa0089870 | Msa0475500 | 0.836346 | 9.874824e-57 | -8.615850e-47 |
| Msa0101020 | Msa0475500 | 0.840927 | 6.474854e-58 | -8.615850e-47 |
| Msa0108390 | Msa0475500 | 0.812002 | 5.277492e-51 | -8.615850e-47 |
| Msa0119320 | Msa0475500 | 0.826148 | 3.179591e-54 | -8.615850e-47 |
| Msa0124260 | Msa0475500 | 0.800479 | 1.413520e-48 | -8.615850e-47 |
| Msa0134000 | Msa0475500 | 0.800037 | 1.738861e-48 | -8.615850e-47 |
| Msa0136260 | Msa0475500 | 0.831866 | 1.309049e-55 | -8.615850e-47 |
| Msa0142460 | Msa0475500 | 0.817552 | 3.107942e-52 | -8.615850e-47 |
| Msa0144790 | Msa0475500 | 0.814226 | 1.715835e-51 | -8.615850e-47 |
| Msa0145110 | Msa0475500 | 0.821608 | 3.688499e-53 | -8.615850e-47 |
| Msa0168630 | Msa0475500 | 0.836366 | 9.758972e-57 | -8.615850e-47 |
| Msa0169440 | Msa0475500 | 0.840330 | 9.280230e-58 | -8.615850e-47 |
| Msa0169820 | Msa0475500 | 0.805132 | 1.547333e-49 | -8.615850e-47 |
| Msa0170140 | Msa0475500 | 0.821211 | 4.554326e-53 | -8.615850e-47 |
| Msa0175050 | Msa0475500 | 0.804183 | 2.441135e-49 | -8.615850e-47 |
| Msa0178510 | Msa0475500 | 0.823415 | 1.402383e-53 | -8.615850e-47 |
| Msa0187030 | Msa0475500 | 0.837103 | 6.331858e-57 | -8.615850e-47 |
| Msa0187830 | Msa0475500 | 0.830456 | 2.907619e-55 | -8.615850e-47 |
| Msa0191890 | Msa0475500 | 0.837985 | 3.762617e-57 | -8.615850e-47 |
| Msa0193540 | Msa0475500 | 0.862540 | 4.713341e-64 | -8.615850e-47 |
| Msa0194010 | Msa0475500 | 0.815648 | 8.300017e-52 | -8.615850e-47 |
| Msa0200560 | Msa0475500 | 0.835680 | 1.457447e-56 | -8.615850e-47 |
| Msa0225640 | Msa0475500 | 0.827824 | 1.264070e-54 | -8.615850e-47 |
| Msa0227230 | Msa0475500 | 0.816367 | 5.734880e-52 | -8.615850e-47 |
| Msa0230370 | Msa0475500 | 0.825637 | 4.206104e-54 | -8.615850e-47 |
| Msa0234440 | Msa0475500 | 0.801974 | 6.988505e-49 | -8.615850e-47 |
| Msa0235470 | Msa0475500 | 0.829895 | 3.984810e-55 | -8.615850e-47 |
| Msa0235880 | Msa0475500 | 0.823794 | 1.143042e-53 | -8.615850e-47 |
| Msa0238230 | Msa0475500 | 0.801089 | 1.061449e-48 | -8.615850e-47 |
| Msa0377440 | Msa0475500 | 0.838676 | 2.496078e-57 | -8.615850e-47 |
| Msa0379710 | Msa0475500 | 0.937025 | 6.766936e-98 | -8.615850e-47 |
| Msa0382490 | Msa0475500 | 0.810185 | 1.307150e-50 | -8.615850e-47 |
| Msa0390960 | Msa0475500 | 0.834817 | 2.406526e-56 | -8.615850e-47 |
| Msa0398200 | Msa0475500 | 0.824284 | 8.771800e-54 | -8.615850e-47 |
| Msa0403660 | Msa0475500 | 0.805923 | 1.056030e-49 | -8.615850e-47 |
| Msa0417650 | Msa0475500 | 0.805556 | 1.261036e-49 | -8.615850e-47 |
| Msa0417730 | Msa0475500 | 0.801739 | 7.811816e-49 | -8.615850e-47 |
| Msa0422180 | Msa0475500 | 0.815720 | 7.999875e-52 | -8.615850e-47 |
| Msa0429090 | Msa0475500 | 0.976237 | 1.924024e-141 | -8.615850e-47 |
| Msa0432670 | Msa0475500 | 0.834940 | 2.240986e-56 | -8.615850e-47 |
| Msa0436370 | Msa0475500 | 0.863144 | 3.070606e-64 | -8.615850e-47 |
| Msa0437970 | Msa0475500 | 0.816321 | 5.874209e-52 | -8.615850e-47 |
| Msa0475500 | Msa0514610 | 0.800505 | 1.396912e-48 | -8.615850e-47 |
| Msa0475500 | Msa0517650 | 0.834141 | 3.558394e-56 | -8.615850e-47 |
| Msa0475500 | Msa0559500 | 0.817598 | 3.034666e-52 | -8.615850e-47 |
| Msa0475500 | Msa0559510 | 0.821964 | 3.050592e-53 | -8.615850e-47 |
| Msa0475500 | Msa0572420 | 0.847208 | 1.337586e-59 | -8.615850e-47 |
| Msa0475500 | Msa0572480 | 0.861058 | 1.339342e-63 | -8.615850e-47 |
| Msa0475500 | Msa0573040 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0475500 | Msa0576890 | 0.821158 | 4.684985e-53 | -8.615850e-47 |
| Msa0475500 | Msa0579660 | 0.822871 | 1.878584e-53 | -8.615850e-47 |
| Msa0475500 | Msa0581050 | 0.815901 | 7.291282e-52 | -8.615850e-47 |
| Msa0475500 | Msa0613710 | 0.813900 | 2.025105e-51 | -8.615850e-47 |
| Msa0475500 | Msa0653440 | 0.820546 | 6.477575e-53 | -8.615850e-47 |
| Msa0475500 | Msa0661320 | 0.816088 | 6.622626e-52 | -8.615850e-47 |
| Msa0475500 | Msa0662570 | 0.806247 | 9.026316e-50 | -8.615850e-47 |
| Msa0475500 | Msa0689760 | 0.839691 | 1.361635e-57 | -8.615850e-47 |
| Msa0475500 | Msa0691050 | 0.813275 | 2.778968e-51 | -8.615850e-47 |
| Msa0475500 | Msa0695870 | 0.808109 | 3.639996e-50 | -8.615850e-47 |
| Msa0475500 | Msa0698290 | 0.800317 | 1.525427e-48 | -8.615850e-47 |
| Msa0475500 | Msa0698440 | 0.819636 | 1.046834e-52 | -8.615850e-47 |
| Msa0475500 | Msa0714990 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0475500 | Msa0716860 | 0.827226 | 1.758180e-54 | -8.615850e-47 |
| Msa0475500 | Msa0718070 | 0.821855 | 3.233995e-53 | -8.615850e-47 |
| Msa0475500 | Msa0740720 | 0.806118 | 9.607492e-50 | -8.615850e-47 |
| Msa0475500 | Msa0747650 | 0.930828 | 9.264528e-94 | -8.615850e-47 |
| Msa0475500 | Msa0750250 | 0.828593 | 8.249020e-55 | -8.615850e-47 |
| Msa0475500 | Msa0751260 | 0.838194 | 3.323678e-57 | -8.615850e-47 |
| Msa0475500 | Msa0757800 | 0.808853 | 2.524616e-50 | -8.615850e-47 |
| Msa0475500 | Msa0758250 | 0.817983 | 2.484185e-52 | -8.615850e-47 |
| Msa0475500 | Msa0773310 | 0.806094 | 9.721327e-50 | -8.615850e-47 |
| Msa0475500 | Msa0780280 | 0.831385 | 1.719989e-55 | -8.615850e-47 |
| Msa0475500 | Msa0795070 | 0.824577 | 7.487697e-54 | -8.615850e-47 |
| Msa0475500 | Msa0798010 | 0.832543 | 8.905083e-56 | -8.615850e-47 |
| Msa0475500 | Msa0800770 | 0.822642 | 2.123585e-53 | -8.615850e-47 |
| Msa0475500 | Msa0809140 | 0.832469 | 9.286170e-56 | -8.615850e-47 |
| Msa0475500 | Msa0810760 | 0.802400 | 5.713106e-49 | -8.615850e-47 |
| Msa0475500 | Msa0821800 | 0.818575 | 1.824640e-52 | -8.615850e-47 |
| Msa0475500 | Msa0827150 | 0.833078 | 6.556706e-56 | -8.615850e-47 |
| Msa0475500 | Msa0836650 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0475500 | Msa0837870 | 0.817089 | 3.950912e-52 | -8.615850e-47 |
| Msa0475500 | Msa0838930 | 0.843377 | 1.455098e-58 | -8.615850e-47 |
| Msa0475500 | Msa0839000 | 0.813605 | 2.352103e-51 | -8.615850e-47 |
| Msa0475500 | Msa0861450 | 0.804892 | 1.736316e-49 | -8.615850e-47 |
| Msa0475500 | Msa0861830 | 0.803691 | 3.089317e-49 | -8.615850e-47 |
| Msa0475500 | Msa0868160 | 0.816503 | 5.346597e-52 | -8.615850e-47 |
| Msa0475500 | Msa0873860 | 0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa0475500 | Msa0902710 | 0.814059 | 1.868322e-51 | -8.615850e-47 |
| Msa0475500 | Msa0975940 | 0.802570 | 5.269275e-49 | -8.615850e-47 |
| Msa0475500 | Msa0981310 | 0.833323 | 5.695425e-56 | -8.615850e-47 |
| Msa0475500 | Msa0982240 | 0.804297 | 2.311605e-49 | -8.615850e-47 |
| Msa0475500 | Msa1000190 | 0.804293 | 2.315514e-49 | -8.615850e-47 |
| Msa0475500 | Msa1008750 | 0.821054 | 4.951084e-53 | -8.615850e-47 |
| Msa0475500 | Msa1009390 | 0.856716 | 2.666117e-62 | -8.615850e-47 |
| Msa0475500 | Msa1010070 | 0.817265 | 3.607020e-52 | -8.615850e-47 |
| Msa0475500 | Msa1014010 | 0.815701 | 8.077803e-52 | -8.615850e-47 |
| Msa0475500 | Msa1021510 | 0.816055 | 6.735095e-52 | -8.615850e-47 |
| Msa0475500 | Msa1034700 | 0.819584 | 1.075633e-52 | -8.615850e-47 |
| Msa0475500 | Msa1038080 | 0.808845 | 2.535601e-50 | -8.615850e-47 |
| Msa0475500 | Msa1050740 | 0.829825 | 4.144506e-55 | -8.615850e-47 |
| Msa0475500 | Msa1093480 | 0.829394 | 5.275942e-55 | -8.615850e-47 |
| Msa0475500 | Msa1096060 | 0.836352 | 9.838475e-57 | -8.615850e-47 |
| Msa0475500 | Msa1098250 | 0.826527 | 2.583637e-54 | -8.615850e-47 |
| Msa0475500 | Msa1098270 | 0.879027 | 1.742181e-69 | -8.615850e-47 |
| Msa0475500 | Msa1098290 | 0.867749 | 1.087517e-65 | -8.615850e-47 |
| Msa0475500 | Msa1114180 | 0.801041 | 1.085711e-48 | -8.615850e-47 |
| Msa0475500 | Msa1118610 | 0.802293 | 6.009547e-49 | -8.615850e-47 |
| Msa0475500 | Msa1118760 | 0.841859 | 3.680251e-58 | -8.615850e-47 |
| Msa0475500 | Msa1129690 | 0.801910 | 7.203276e-49 | -8.615850e-47 |
| Msa0475500 | Msa1133220 | 0.845632 | 3.597761e-59 | -8.615850e-47 |
| Msa0475500 | Msa1136920 | -0.817049 | 4.034165e-52 | -8.615850e-47 |
| Msa0475500 | Msa1138280 | 0.839141 | 1.892655e-57 | -8.615850e-47 |
| Msa0475500 | Msa1138320 | 0.876122 | 1.793983e-68 | -8.615850e-47 |
| Msa0475500 | Msa1143020 | 0.814678 | 1.362950e-51 | -8.615850e-47 |
| Msa0475500 | Msa1158660 | 0.828355 | 9.414844e-55 | -8.615850e-47 |
| Msa0475500 | Msa1170130 | 0.826174 | 3.136026e-54 | -8.615850e-47 |
| Msa0475500 | Msa1171760 | 0.801540 | 8.581597e-49 | -8.615850e-47 |
| Msa0475500 | Msa1177780 | 0.819627 | 1.051697e-52 | -8.615850e-47 |
| Msa0475500 | Msa1182130 | 0.803229 | 3.851965e-49 | -8.615850e-47 |
| Msa0475500 | Msa1215070 | 0.812187 | 4.809311e-51 | -8.615850e-47 |
| Msa0475500 | Msa1219900 | 0.827017 | 1.972882e-54 | -8.615850e-47 |
| Msa0475500 | Msa1225200 | 0.848074 | 7.725457e-60 | -8.615850e-47 |
| Msa0475500 | Msa1227330 | 0.811215 | 7.826444e-51 | -8.615850e-47 |
| Msa0475500 | Msa1259270 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa0475500 | Msa1264330 | -0.814710 | 1.341240e-51 | -8.615850e-47 |
| Msa0475500 | Msa1266490 | 0.826820 | 2.199703e-54 | -8.615850e-47 |
| Msa0475500 | Msa1279420 | 0.810134 | 1.340610e-50 | -8.615850e-47 |
| Msa0475500 | Msa1288450 | 0.812634 | 3.840482e-51 | -8.615850e-47 |
| Msa0475500 | Msa1297310 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0475500 | Msa1297960 | 0.820134 | 8.050886e-53 | -8.615850e-47 |
| Msa0475500 | Msa1303090 | -0.808478 | 3.036557e-50 | -8.615850e-47 |
| Msa0475500 | Msa1319820 | 0.828508 | 8.646544e-55 | -8.615850e-47 |
| Msa0475500 | Msa1330780 | 0.807383 | 5.192900e-50 | -8.615850e-47 |
| Msa0475500 | Msa1332050 | 0.802567 | 5.276525e-49 | -8.615850e-47 |
| Msa0475500 | Msa1341490 | 0.804026 | 2.631876e-49 | -8.615850e-47 |
| Msa0475500 | Msa1349450 | 0.812357 | 4.415627e-51 | -8.615850e-47 |
| Msa0475500 | Msa1352540 | -0.820127 | 8.083029e-53 | -8.615850e-47 |
| Msa0475500 | Msa1359920 | 0.892395 | 1.652239e-74 | -8.615850e-47 |
| Msa0475500 | Msa1360240 | 0.805133 | 1.546394e-49 | -8.615850e-47 |
| Msa0475500 | Msa1366300 | 0.835371 | 1.744359e-56 | -8.615850e-47 |
| Msa0475500 | Msa1370470 | -0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0475500 | Msa1372150 | 0.817223 | 3.686944e-52 | -8.615850e-47 |
| Msa0475500 | Msa1376930 | 0.806838 | 6.771074e-50 | -8.615850e-47 |
| Msa0475500 | Msa1379590 | 0.824031 | 1.005869e-53 | -8.615850e-47 |
| Msa0475500 | Msa1379850 | 0.862210 | 5.953181e-64 | -8.615850e-47 |
| Msa0475500 | Msa1382680 | 0.813833 | 2.094874e-51 | -8.615850e-47 |
| Msa0475500 | Msa1383980 | -0.806988 | 6.294550e-50 | -8.615850e-47 |
| Msa0475500 | Msa1385020 | 0.802416 | 5.667892e-49 | -8.615850e-47 |
| Msa0475500 | Msa1398890 | 0.806498 | 7.989588e-50 | -8.615850e-47 |
| Msa0475500 | Msa1400070 | 0.802248 | 6.140097e-49 | -8.615850e-47 |
| Msa0475500 | Msa1401270 | 0.835694 | 1.445722e-56 | -8.615850e-47 |
| Msa0475500 | Msa1408620 | -0.800589 | 1.342667e-48 | -8.615850e-47 |
| Msa0475500 | Msa1409490 | 0.813374 | 2.643922e-51 | -8.615850e-47 |
| Msa0475500 | Msa1420250 | 0.837983 | 3.765424e-57 | -8.615850e-47 |
| Msa0475500 | Msa1424630 | 0.833206 | 6.091258e-56 | -8.615850e-47 |
| Msa0475500 | Msa1424640 | 0.822448 | 2.356092e-53 | -8.615850e-47 |
| Msa0475500 | Msa1426570 | 0.808580 | 2.888041e-50 | -8.615850e-47 |
| Msa0475500 | Msa1433220 | 0.855343 | 6.725732e-62 | -8.615850e-47 |
| Msa0475500 | Msa1435400 | 0.806411 | 8.332789e-50 | -8.615850e-47 |
| Msa0475500 | Msa1445220 | 0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0475500 | Msa1446780 | 0.831155 | 1.959724e-55 | -8.615850e-47 |
| Msa0475500 | Msa1447150 | 0.809423 | 1.906476e-50 | -8.615850e-47 |
| Msa0475500 | Msa1453360 | 0.802041 | 6.771173e-49 | -8.615850e-47 |
| Msa0475500 | Msa1458340 | 0.836163 | 1.099199e-56 | -8.615850e-47 |
| Msa0475500 | Msa1459050 | 0.820380 | 7.072299e-53 | -8.615850e-47 |
| Msa0475500 | Msa1462660 | 0.808620 | 2.832611e-50 | -8.615850e-47 |
| Msa0243250 | Msa0475500 | 0.833490 | 5.176893e-56 | -8.615850e-47 |
| Msa0266240 | Msa0475500 | 0.811681 | 6.200546e-51 | -8.615850e-47 |
| Msa0274630 | Msa0475500 | 0.860885 | 1.511277e-63 | -8.615850e-47 |
| Msa0275660 | Msa0475500 | 0.804203 | 2.418361e-49 | -8.615850e-47 |
| Msa0277420 | Msa0475500 | 0.833419 | 5.390916e-56 | -8.615850e-47 |
| Msa0279260 | Msa0475500 | 0.802109 | 6.556609e-49 | -8.615850e-47 |
| Msa0281640 | Msa0475500 | 0.812518 | 4.071209e-51 | -8.615850e-47 |
| Msa0312530 | Msa0475500 | 0.833954 | 3.963024e-56 | -8.615850e-47 |
| Msa0314060 | Msa0475500 | 0.843463 | 1.379513e-58 | -8.615850e-47 |
| Msa0317270 | Msa0475500 | 0.843793 | 1.125880e-58 | -8.615850e-47 |
| Msa0320800 | Msa0475500 | 0.828534 | 8.523992e-55 | -8.615850e-47 |
| Msa0339280 | Msa0475500 | 0.866397 | 2.938359e-65 | -8.615850e-47 |
| Msa0347950 | Msa0475500 | 0.822947 | 1.803585e-53 | -8.615850e-47 |
| Msa0347990 | Msa0475500 | 0.827549 | 1.471515e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475500 | MtrunA17_Chr3g0132821 | 96.526 | 662 | 21 | 1 | 1 | 662 | 1 | 660 | 0.0 | 1300 |
| Msa0475500 | MtrunA17_Chr7g0273611 | 38.462 | 156 | 94 | 1 | 18 | 173 | 1 | 154 | 4.13e-25 | 109 |
| Msa0475500 | MtrunA17_Chr4g0029001 | 37.500 | 152 | 93 | 1 | 18 | 169 | 1 | 150 | 1.13e-21 | 99.0 |
| Msa0475500 | MtrunA17_Chr2g0326721 | 36.842 | 152 | 94 | 1 | 18 | 169 | 1 | 150 | 1.67e-21 | 97.4 |
| Msa0475500 | MtrunA17_Chr4g0002041 | 34.177 | 158 | 100 | 2 | 19 | 176 | 28 | 181 | 1.07e-20 | 93.6 |
| Msa0475500 | MtrunA17_Chr5g0435011 | 33.333 | 159 | 102 | 2 | 18 | 176 | 27 | 181 | 2.39e-19 | 91.7 |
| Msa0475500 | MtrunA17_Chr6g0461131 | 35.625 | 160 | 89 | 4 | 17 | 173 | 157 | 305 | 3.69e-17 | 85.1 |
| Msa0475500 | MtrunA17_Chr3g0118921 | 32.468 | 154 | 93 | 4 | 20 | 173 | 50 | 192 | 2.06e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475500 | AT1G09700.2 | 64.362 | 188 | 66 | 1 | 12 | 199 | 9 | 195 | 8.53e-80 | 255 |
| Msa0475500 | AT1G09700.1 | 64.362 | 188 | 66 | 1 | 12 | 199 | 9 | 195 | 3.59e-78 | 255 |
| Msa0475500 | AT3G26932.1 | 40.385 | 156 | 91 | 1 | 18 | 173 | 1 | 154 | 5.90e-28 | 116 |
| Msa0475500 | AT3G26932.2 | 40.385 | 156 | 91 | 1 | 18 | 173 | 1 | 154 | 5.90e-28 | 116 |
| Msa0475500 | AT5G41070.1 | 32.243 | 214 | 125 | 3 | 18 | 231 | 1 | 194 | 4.76e-24 | 105 |
| Msa0475500 | AT2G28380.1 | 36.196 | 163 | 102 | 1 | 18 | 180 | 1 | 161 | 3.07e-22 | 100 |
| Msa0475500 | AT3G62800.3 | 31.839 | 223 | 135 | 5 | 17 | 239 | 3 | 208 | 9.16e-22 | 97.4 |
| Msa0475500 | AT3G62800.2 | 31.839 | 223 | 135 | 5 | 17 | 239 | 3 | 208 | 1.42e-21 | 97.4 |
| Msa0475500 | AT3G62800.1 | 31.839 | 223 | 135 | 5 | 17 | 239 | 3 | 208 | 1.42e-21 | 97.4 |
Find 147 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCGTATATTATTTATTT+TGG | 0.107367 | 3_3:-78757555 | None:intergenic |
| CTTCCCATGAACCTTCTTTC+AGG | 0.162473 | 3_3:+78758905 | Msa0475500:CDS |
| ATCTAAATTAAGAATATTTC+TGG | 0.176270 | 3_3:-78757500 | None:intergenic |
| TCTAAGAAATCACGCTTTAA+AGG | 0.215863 | 3_3:+78760025 | Msa0475500:CDS |
| CTGTCATTCCATCCCGAAAA+AGG | 0.224505 | 3_3:+78759960 | Msa0475500:CDS |
| ATTTCTATGTGGTTTCTTCT+TGG | 0.224812 | 3_3:-78760056 | None:intergenic |
| ATTCCCAATATTGATCTCTT+TGG | 0.236860 | 3_3:-78761262 | None:intergenic |
| TCAGAAGTCATGAAGAATTC+TGG | 0.244468 | 3_3:+78761138 | Msa0475500:CDS |
| CTGCTTCAGATTTGATTTCC+TGG | 0.251417 | 3_3:-78760795 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.251417 | 3_3:-78760900 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.251417 | 3_3:-78761107 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.267375 | 3_3:-78761005 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.275383 | 3_3:-78760174 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.275383 | 3_3:-78760276 | None:intergenic |
| CAATCCAAAGAGATCAATAT+TGG | 0.281542 | 3_3:+78761258 | Msa0475500:CDS |
| CTGCTTCAGATTTGACTTCC+TGG | 0.293244 | 3_3:-78760690 | None:intergenic |
| AGCTGCAGAGGTTGCTTTGA+TGG | 0.313250 | 3_3:+78759002 | Msa0475500:CDS |
| CTGCTCCAGATTTGACTTCC+TGG | 0.313787 | 3_3:-78760378 | None:intergenic |
| CTGCTTCAGATTTAACTTCC+TGG | 0.322914 | 3_3:-78760480 | None:intergenic |
| GATGGAGCAAAGATCAATAA+TGG | 0.336169 | 3_3:+78760112 | Msa0475500:CDS |
| TCCGTTCTCAGAATTCTTCA+TGG | 0.354796 | 3_3:-78760416 | None:intergenic |
| GCCATGCAGTATTATGATAA+TGG | 0.370303 | 3_3:+78760313 | Msa0475500:CDS |
| ATTGGAGGGATGCTCTATAT+TGG | 0.371085 | 3_3:+78759827 | Msa0475500:CDS |
| AGAGACATTAGCTGCAATAA+AGG | 0.374142 | 3_3:+78760567 | Msa0475500:CDS |
| GAATTCTGCATGGCTTCATC+TGG | 0.378975 | 3_3:-78760511 | None:intergenic |
| ATTGTGCAAGAATTTACTTC+AGG | 0.382437 | 3_3:+78759706 | Msa0475500:CDS |
| AAGCGTGATTTCTTAGACTT+CGG | 0.393072 | 3_3:-78760019 | None:intergenic |
| GGCCTCCAGGAAGTCAAATC+TGG | 0.396478 | 3_3:+78760373 | Msa0475500:CDS |
| TCTGTGCATACTCTTGCAAT+TGG | 0.398490 | 3_3:-78758837 | None:intergenic |
| GCCATTGTATCAGAGCAAAA+AGG | 0.401184 | 3_3:+78759757 | Msa0475500:CDS |
| TGACAGTCAAATGGCCAAAC+TGG | 0.404308 | 3_3:-78759943 | None:intergenic |
| TTGATGGAGTTGGCTAAAAC+TGG | 0.412242 | 3_3:+78759018 | Msa0475500:CDS |
| CGATGCAGAATTCTGAGAAC+GGG | 0.413538 | 3_3:+78760836 | Msa0475500:CDS |
| CAGGCTTCTGAAAACCAGTT+TGG | 0.414886 | 3_3:+78759929 | Msa0475500:CDS |
| TGCAATAAAGGAAGTCAAAT+CGG | 0.421774 | 3_3:+78760579 | Msa0475500:CDS |
| CTAAGAAATCACGCTTTAAA+GGG | 0.422488 | 3_3:+78760026 | Msa0475500:CDS |
| CCATGCAGAATTCTGAGAAC+GGG | 0.423049 | 3_3:+78760731 | Msa0475500:CDS |
| CAGAAGTCATGAAGAATTCT+GGG | 0.423704 | 3_3:+78761139 | Msa0475500:CDS |
| AGATGAAATTGAAGAGTGGT+TGG | 0.426963 | 3_3:-78757732 | None:intergenic |
| CAATAATGGGGCAGAATCAC+TGG | 0.429446 | 3_3:+78760126 | Msa0475500:CDS |
| TCAACCGTACACGAATATAA+TGG | 0.434098 | 3_3:-78759803 | None:intergenic |
| TTGACCTGAAAGAAGGTTCA+TGG | 0.434596 | 3_3:-78758909 | None:intergenic |
| ATGGAGCAAAGATCAATAAT+GGG | 0.435405 | 3_3:+78760113 | Msa0475500:CDS |
| AGAGGTTGCTTTGATGGAGT+TGG | 0.436246 | 3_3:+78759008 | Msa0475500:CDS |
| ACAGAATTGCAATGGAGATA+TGG | 0.444900 | 3_3:+78761350 | Msa0475500:CDS |
| ACCTTGGAAATCTTCGTTAG+TGG | 0.448531 | 3_3:-78757780 | None:intergenic |
| CATCGCCAGTATGTATCCCT+TGG | 0.457624 | 3_3:-78761310 | None:intergenic |
| TGCTCCCAAGGGATACATAC+TGG | 0.458016 | 3_3:+78761305 | Msa0475500:CDS |
| GTTCGGTATGATTCTTTGAC+TGG | 0.460775 | 3_3:+78758949 | Msa0475500:CDS |
| AATCCAAAGAGATCAATATT+GGG | 0.463678 | 3_3:+78761259 | Msa0475500:CDS |
| AGAGACATTAGCTGCAGTCC+AGG | 0.469629 | 3_3:+78760987 | Msa0475500:CDS |
| CAGCATTGTCAGTGTTAATA+CGG | 0.476206 | 3_3:-78760087 | None:intergenic |
| AAGCCTGGGATGCATTTGTC+TGG | 0.480978 | 3_3:-78759913 | None:intergenic |
| TGCAATGGAGATATGGTCTC+TGG | 0.488580 | 3_3:+78761357 | Msa0475500:CDS |
| AGCAGAGCAGTCAGCTGCAG+AGG | 0.490356 | 3_3:+78758990 | Msa0475500:CDS |
| TTCTGCATGGCTTCATCTGA+AGG | 0.494295 | 3_3:-78760613 | None:intergenic |
| TTCTGCATGGCTTCATCTGA+AGG | 0.494295 | 3_3:-78760718 | None:intergenic |
| GCAAGTGCTAATGATGAATC+TGG | 0.496570 | 3_3:+78760148 | Msa0475500:CDS |
| TTCAGATTTGATTTCCTGGA+TGG | 0.500082 | 3_3:-78760896 | None:intergenic |
| GCCATGACAAATTCTGAAAA+CGG | 0.500363 | 3_3:+78760940 | Msa0475500:CDS |
| TTCAGATTTGATTTCCTGGA+TGG | 0.500978 | 3_3:-78760791 | None:intergenic |
| TAATGATGAATCTGGCCTCC+AGG | 0.501653 | 3_3:+78760156 | Msa0475500:CDS |
| ATCGCCAGTATGTATCCCTT+GGG | 0.503548 | 3_3:-78761309 | None:intergenic |
| CGTATTAACACTGACAATGC+TGG | 0.505782 | 3_3:+78760088 | Msa0475500:CDS |
| AGAGACATTAGCTGGCCTCC+AGG | 0.509998 | 3_3:+78760360 | Msa0475500:CDS |
| AGAGACATTAGCTGGCCTCC+AGG | 0.509998 | 3_3:+78760462 | Msa0475500:CDS |
| AGAAGTGTCATTTGCTCCCA+AGG | 0.510950 | 3_3:+78761293 | Msa0475500:CDS |
| TTCTGCATCGCTTCATCTGA+AGG | 0.512503 | 3_3:-78760823 | None:intergenic |
| CATGAGAAAGAGACATTAGC+TGG | 0.514047 | 3_3:+78761081 | Msa0475500:CDS |
| AGAAACATTAGCTGCCATCC+AGG | 0.514509 | 3_3:+78760672 | Msa0475500:CDS |
| GATGAAATTGAAGAGTGGTT+GGG | 0.515775 | 3_3:-78757731 | None:intergenic |
| CGGCGCTTCTTATTTCTATG+TGG | 0.516238 | 3_3:-78760067 | None:intergenic |
| ATCTGAAGCAGCATTCCCTT+CGG | 0.519137 | 3_3:+78760288 | Msa0475500:CDS |
| CATGAGAAAGAGACATTAGC+TGG | 0.520527 | 3_3:+78760454 | Msa0475500:CDS |
| AGAGACATTAGCTGCCATCC+AGG | 0.520770 | 3_3:+78760882 | Msa0475500:CDS |
| GAATATAATGGTGCCCTACC+TGG | 0.523233 | 3_3:-78759791 | None:intergenic |
| ATCACTGTTGACCTGAAAGA+AGG | 0.527088 | 3_3:-78758916 | None:intergenic |
| TTCAGATTTGACTTCCTGGA+TGG | 0.527890 | 3_3:-78760686 | None:intergenic |
| TCCTTAGTAGTTTCATACAC+AGG | 0.528972 | 3_3:-78758877 | None:intergenic |
| CAGTGATTATGAATGATGTT+CGG | 0.529179 | 3_3:+78758932 | Msa0475500:CDS |
| TATTCGTGTACGGTTGACAT+TGG | 0.530174 | 3_3:+78759809 | Msa0475500:CDS |
| ACCTGTGTATGAAACTACTA+AGG | 0.531516 | 3_3:+78758876 | Msa0475500:CDS |
| AGAGACATTAGCTGGCCTCC+AGG | 0.532686 | 3_3:+78760258 | Msa0475500:CDS |
| CATGAGAAAGAGACATTAGC+TGG | 0.534007 | 3_3:+78760250 | Msa0475500:CDS |
| CATGAGAAAGAGACATTAGC+TGG | 0.534418 | 3_3:+78760352 | Msa0475500:CDS |
| TGAAGTGTGAGATTAGTGTC+AGG | 0.535569 | 3_3:-78757439 | None:intergenic |
| GATTATTCAAAACAAATGAC+TGG | 0.535856 | 3_3:-78761200 | None:intergenic |
| TCGTGTACGGTTGACATTGG+AGG | 0.535923 | 3_3:+78759812 | Msa0475500:CDS |
| TATCCAGACAAATGCATCCC+AGG | 0.536475 | 3_3:+78759910 | Msa0475500:CDS |
| CAAGAGTATGCACAGAAAGC+AGG | 0.538168 | 3_3:+78758844 | Msa0475500:CDS |
| TTCTGCATGGCTTCATCTGG+AGG | 0.540711 | 3_3:-78760508 | None:intergenic |
| TTTGTCATGGCTTCATCTGA+AGG | 0.542263 | 3_3:-78760928 | None:intergenic |
| CGTGTACGGTTGACATTGGA+GGG | 0.543141 | 3_3:+78759813 | Msa0475500:CDS |
| AGAGACATTAGCTGGCATCC+AGG | 0.543604 | 3_3:+78761089 | Msa0475500:CDS |
| ATGAACAAACAGAATTGCAA+TGG | 0.547564 | 3_3:+78761342 | Msa0475500:CDS |
| GAATTCTTCATGGCTTCTGA+AGG | 0.548362 | 3_3:-78760406 | None:intergenic |
| GGGATGGAATGACAGTCAAA+TGG | 0.548556 | 3_3:-78759952 | None:intergenic |
| GGATGACACACCACCAGGTA+GGG | 0.554430 | 3_3:+78759778 | Msa0475500:CDS |
| GGCACCATTATATTCGTGTA+CGG | 0.559813 | 3_3:+78759799 | Msa0475500:CDS |
| GGAGGGATGCTCTATATTGG+AGG | 0.559971 | 3_3:+78759830 | Msa0475500:CDS |
| ATCTTCGTTAGTGGTGGACA+TGG | 0.562155 | 3_3:-78757771 | None:intergenic |
| AACACTGACAATGCTGGTGA+TGG | 0.565998 | 3_3:+78760094 | Msa0475500:CDS |
| AACGGCGCAGATTCCGACAC+AGG | 0.569849 | 3_3:+78757641 | Msa0475500:five_prime_UTR |
| GTGTATGAAACTACTAAGGA+AGG | 0.573469 | 3_3:+78758880 | Msa0475500:CDS |
| TAATACTGCATGGCTTCCGA+AGG | 0.576922 | 3_3:-78760304 | None:intergenic |
| TCCATTATCATAATACTGCA+TGG | 0.577735 | 3_3:-78760314 | None:intergenic |
| TTGGAAATCTTCGTTAGTGG+TGG | 0.577745 | 3_3:-78757777 | None:intergenic |
| AACGGAATCTATTGCTGATG+AGG | 0.580454 | 3_3:+78759985 | Msa0475500:CDS |
| AATTCTTCATGACTTCTGAA+AGG | 0.581745 | 3_3:-78761134 | None:intergenic |
| GAGAAGATGAAATTGAAGAG+TGG | 0.587475 | 3_3:-78757736 | None:intergenic |
| CTTCAGATTTGATTTCCTGG+AGG | 0.587651 | 3_3:-78760171 | None:intergenic |
| CTTCAGATTTGATTTCCTGG+AGG | 0.587651 | 3_3:-78760273 | None:intergenic |
| AGTGGTGGACATGGTGAGAG+AGG | 0.590480 | 3_3:-78757762 | None:intergenic |
| GCCATGCAGAATTCTGAGAA+CGG | 0.591866 | 3_3:+78760730 | Msa0475500:CDS |
| TTGTCATGGCTTCATCTGAA+GGG | 0.594389 | 3_3:-78760927 | None:intergenic |
| TGACCTGAAAGAAGGTTCAT+GGG | 0.594942 | 3_3:-78758908 | None:intergenic |
| CCCGTTCTCAGAATTCTGCA+TGG | 0.596419 | 3_3:-78760731 | None:intergenic |
| TCCGTTCTCAGAATTCTGCA+TGG | 0.602147 | 3_3:-78760626 | None:intergenic |
| CTGAAAGAAGGTTCATGGGA+AGG | 0.602671 | 3_3:-78758904 | None:intergenic |
| GCGATGCAGAATTCTGAGAA+CGG | 0.606253 | 3_3:+78760835 | Msa0475500:CDS |
| TCCGTTCTCAGAATTCTGCA+TGG | 0.609171 | 3_3:-78760521 | None:intergenic |
| AGGATGACACACCACCAGGT+AGG | 0.617789 | 3_3:+78759777 | Msa0475500:CDS |
| TCTGCATGGCTTCATCTGAA+GGG | 0.618565 | 3_3:-78760612 | None:intergenic |
| TCTGCATGGCTTCATCTGAA+GGG | 0.618565 | 3_3:-78760717 | None:intergenic |
| ATACATACTGGCGATGAGCG+TGG | 0.622245 | 3_3:+78761317 | Msa0475500:CDS |
| TGAGAACAAAGTTGTGTGTA+CGG | 0.623105 | 3_3:-78757669 | None:intergenic |
| CTCCAGATTTGACTTCCTGG+AGG | 0.623620 | 3_3:-78760375 | None:intergenic |
| GAAGTGTCATTTGCTCCCAA+GGG | 0.625568 | 3_3:+78761294 | Msa0475500:CDS |
| AGCTAATAAAGCAGTTCTCG+CGG | 0.626972 | 3_3:-78759888 | None:intergenic |
| GCCATGAAGAATTCTGAGAA+CGG | 0.628543 | 3_3:+78760415 | Msa0475500:CDS |
| TATGCACAGAAAGCAGGACT+CGG | 0.629186 | 3_3:+78758850 | Msa0475500:CDS |
| TCTGCATGGCTTCATCTGGA+GGG | 0.629877 | 3_3:-78760507 | None:intergenic |
| AGAGACGTTAGCTACCATCC+AGG | 0.630811 | 3_3:+78760777 | Msa0475500:CDS |
| AATTCGTCATGGCTTCTGAA+CGG | 0.635308 | 3_3:-78761032 | None:intergenic |
| TCTGTTCTCAGAATTCGTCA+TGG | 0.636980 | 3_3:-78761043 | None:intergenic |
| GCCATGCAGAATTCTGAGAA+CGG | 0.638030 | 3_3:+78760625 | Msa0475500:CDS |
| GCCATGCAGAATTCTGAGAA+CGG | 0.638440 | 3_3:+78760520 | Msa0475500:CDS |
| GTGTACGGTGAGGCCTGTGT+CGG | 0.646839 | 3_3:-78757654 | None:intergenic |
| TGTATGAAACTACTAAGGAA+GGG | 0.648493 | 3_3:+78758881 | Msa0475500:CDS |
| AATACTGCATGGCTTCCGAA+GGG | 0.654813 | 3_3:-78760303 | None:intergenic |
| ACCACTAACGAAGATTTCCA+AGG | 0.657994 | 3_3:+78757779 | Msa0475500:CDS |
| CTTCAGATTTAACTTCCTGG+AGG | 0.663895 | 3_3:-78760477 | None:intergenic |
| CATGCAGAATTCTGAGAACG+GGG | 0.674016 | 3_3:+78760732 | Msa0475500:CDS |
| ACAAAGTTGTGTGTACGGTG+AGG | 0.701059 | 3_3:-78757664 | None:intergenic |
| TGGAGCAAAGATCAATAATG+GGG | 0.701368 | 3_3:+78760114 | Msa0475500:CDS |
| GATGCAGAATTCTGAGAACG+GGG | 0.733105 | 3_3:+78760837 | Msa0475500:CDS |
| TATAATGGTGCCCTACCTGG+TGG | 0.785345 | 3_3:-78759788 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATCGTATATTATTTATTT+TGG | - | chr3_3:78757558-78757577 | None:intergenic | 10.0% |
| !!! | ACAAATTATAATTTTTTTGT+TGG | + | chr3_3:78759085-78759104 | Msa0475500:intron | 10.0% |
| !! | ATCTAAATTAAGAATATTTC+TGG | - | chr3_3:78757503-78757522 | None:intergenic | 15.0% |
| !! | ACAAAAATTAAACTTTCATA+GGG | + | chr3_3:78758702-78758721 | Msa0475500:intron | 15.0% |
| !!! | TATTTGAAGTTTTTATTTTG+TGG | + | chr3_3:78759177-78759196 | Msa0475500:intron | 15.0% |
| !!! | ATTTGAAGTTTTTATTTTGT+GGG | + | chr3_3:78759178-78759197 | Msa0475500:intron | 15.0% |
| !!! | TATTTTCAGAAGAATAATAT+TGG | - | chr3_3:78759424-78759443 | None:intergenic | 15.0% |
| !! | AATCAAAGATCAAGTATTAT+GGG | - | chr3_3:78757928-78757947 | None:intergenic | 20.0% |
| !! | CAACGAGAATTATATTAAAT+CGG | + | chr3_3:78758468-78758487 | Msa0475500:intron | 20.0% |
| !! | GACAAAAATTAAACTTTCAT+AGG | + | chr3_3:78758701-78758720 | Msa0475500:intron | 20.0% |
| !!! | GATAATTTGTATGCAGTTTT+TGG | - | chr3_3:78757708-78757727 | None:intergenic | 25.0% |
| !!! | ATATAAAATAGAAGCATTGG+TGG | - | chr3_3:78757904-78757923 | None:intergenic | 25.0% |
| !! | GGAATATAAAATAGAAGCAT+TGG | - | chr3_3:78757907-78757926 | None:intergenic | 25.0% |
| ! | CAATCAAAGATCAAGTATTA+TGG | - | chr3_3:78757929-78757948 | None:intergenic | 25.0% |
| !!! | TGATCTTTGATTGTTTTGAA+TGG | + | chr3_3:78757957-78757976 | Msa0475500:intron | 25.0% |
| !!! | GATCTTTGATTGTTTTGAAT+GGG | + | chr3_3:78757958-78757977 | Msa0475500:intron | 25.0% |
| ! | TTTCAGTTATGATTCATACT+CGG | + | chr3_3:78758233-78758252 | Msa0475500:intron | 25.0% |
| !! | TTTGAAAATTGACTCTAGTA+AGG | + | chr3_3:78758395-78758414 | Msa0475500:intron | 25.0% |
| ! | CGATTTAATATAATTCTCGT+TGG | - | chr3_3:78758470-78758489 | None:intergenic | 25.0% |
| ! | ACAAGTAAATAGTTTATCCT+TGG | + | chr3_3:78758503-78758522 | Msa0475500:intron | 25.0% |
| !!! | TATTTGCTTTCTTTTTGAAG+TGG | + | chr3_3:78758783-78758802 | Msa0475500:intron | 25.0% |
| ! | ATGTGAAAAATAATCTGCAA+CGG | - | chr3_3:78759139-78759158 | None:intergenic | 25.0% |
| ! | CATCTCATTATAAACTATCA+AGG | - | chr3_3:78759523-78759542 | None:intergenic | 25.0% |
| ! | ACTGTTGCATATTATATTTG+AGG | + | chr3_3:78759550-78759569 | Msa0475500:intron | 25.0% |
| ! | TATCTAGTGAAAATCGAATA+GGG | - | chr3_3:78759578-78759597 | None:intergenic | 25.0% |
| ! | ATATCTAGTGAAAATCGAAT+AGG | - | chr3_3:78759579-78759598 | None:intergenic | 25.0% |
| ! | TATGAATACAGAACTTAGTA+AGG | - | chr3_3:78759607-78759626 | None:intergenic | 25.0% |
| !!! | TCTGGTTCTGATTATTTTAA+TGG | + | chr3_3:78759659-78759678 | Msa0475500:intron | 25.0% |
| !! | AATTTTTCATGACTTCTGAA+GGG | - | chr3_3:78760204-78760223 | None:intergenic | 25.0% |
| ! | GATTATTCAAAACAAATGAC+TGG | - | chr3_3:78761203-78761222 | None:intergenic | 25.0% |
| !!! | AATCAAGAGAATTTTGAAAG+TGG | + | chr3_3:78761219-78761238 | Msa0475500:CDS | 25.0% |
| !!! | ATCAAGAGAATTTTGAAAGT+GGG | + | chr3_3:78761220-78761239 | Msa0475500:CDS | 25.0% |
| ! | AATCCAAAGAGATCAATATT+GGG | + | chr3_3:78761259-78761278 | Msa0475500:CDS | 25.0% |
| ! | CACTTTTCATAGAATCACAA+CGG | + | chr3_3:78757623-78757642 | Msa0475500:five_prime_UTR | 30.0% |
| GAGAATAATAGTTAGTACCT+TGG | - | chr3_3:78757799-78757818 | None:intergenic | 30.0% | |
| ! | CTTTTTCTTTTACTTTCCCA+GGG | + | chr3_3:78757822-78757841 | Msa0475500:intron | 30.0% |
| TGATTCATCTTATAGAGTGA+TGG | + | chr3_3:78758095-78758114 | Msa0475500:intron | 30.0% | |
| ! | TATAGAGTGATGGAAGATAA+AGG | + | chr3_3:78758105-78758124 | Msa0475500:intron | 30.0% |
| ! | ATAGAGTGATGGAAGATAAA+GGG | + | chr3_3:78758106-78758125 | Msa0475500:intron | 30.0% |
| !! | CTTTTTGGTCTTTAACCTTT+TGG | + | chr3_3:78758200-78758219 | Msa0475500:intron | 30.0% |
| TGAAACAATTACAGACCAAA+AGG | - | chr3_3:78758218-78758237 | None:intergenic | 30.0% | |
| TTCAGTTATGATTCATACTC+GGG | + | chr3_3:78758234-78758253 | Msa0475500:intron | 30.0% | |
| ! | GTGAACGATTATTTCTTAAC+TGG | + | chr3_3:78758261-78758280 | Msa0475500:intron | 30.0% |
| ACTACTTAAGTTCAATCACT+TGG | + | chr3_3:78758293-78758312 | Msa0475500:intron | 30.0% | |
| ! | AAAATTGACTCTAGTAAGGA+GGG | + | chr3_3:78758399-78758418 | Msa0475500:intron | 30.0% |
| CTCTCTAAATGTCTAACTAT+TGG | - | chr3_3:78758446-78758465 | None:intergenic | 30.0% | |
| TAAATAGTTTATCCTTGGAC+AGG | + | chr3_3:78758508-78758527 | Msa0475500:intron | 30.0% | |
| AAATAGTTTATCCTTGGACA+GGG | + | chr3_3:78758509-78758528 | Msa0475500:intron | 30.0% | |
| ACCTTAGAGAAAACCTAAAT+CGG | - | chr3_3:78758663-78758682 | None:intergenic | 30.0% | |
| AAATTAAACTTTCATAGGGC+AGG | + | chr3_3:78758706-78758725 | Msa0475500:intron | 30.0% | |
| TTAAGTCAGATGTTGAATGA+AGG | - | chr3_3:78758745-78758764 | None:intergenic | 30.0% | |
| TGTATGAAACTACTAAGGAA+GGG | + | chr3_3:78758881-78758900 | Msa0475500:CDS | 30.0% | |
| CAGTGATTATGAATGATGTT+CGG | + | chr3_3:78758932-78758951 | Msa0475500:CDS | 30.0% | |
| TTGTAAAGACTACTTACAAC+AGG | - | chr3_3:78759069-78759088 | None:intergenic | 30.0% | |
| AAGTTGAAAGTAGAAAAGAC+AGG | - | chr3_3:78759211-78759230 | None:intergenic | 30.0% | |
| TTAGCTAATCAACGTAAAGA+TGG | - | chr3_3:78759255-78759274 | None:intergenic | 30.0% | |
| ! | TCTTTACGTTGATTAGCTAA+TGG | + | chr3_3:78759255-78759274 | Msa0475500:intron | 30.0% |
| !! | CATTGTTTTGTTGATGTGAT+TGG | + | chr3_3:78759318-78759337 | Msa0475500:intron | 30.0% |
| ! | GCGAGTTATTGTATATTTTC+TGG | + | chr3_3:78759641-78759660 | Msa0475500:intron | 30.0% |
| ATTGTGCAAGAATTTACTTC+AGG | + | chr3_3:78759706-78759725 | Msa0475500:CDS | 30.0% | |
| TCTAAGAAATCACGCTTTAA+AGG | + | chr3_3:78760025-78760044 | Msa0475500:CDS | 30.0% | |
| ! | CTAAGAAATCACGCTTTAAA+GGG | + | chr3_3:78760026-78760045 | Msa0475500:CDS | 30.0% |
| ATTTCTATGTGGTTTCTTCT+TGG | - | chr3_3:78760059-78760078 | None:intergenic | 30.0% | |
| ATGGAGCAAAGATCAATAAT+GGG | + | chr3_3:78760113-78760132 | Msa0475500:CDS | 30.0% | |
| ! | GAATTTTTCATGACTTCTGA+AGG | - | chr3_3:78760205-78760224 | None:intergenic | 30.0% |
| ! | GTCATGAAAAATTCTGAGAA+CGG | + | chr3_3:78760211-78760230 | Msa0475500:CDS | 30.0% |
| TCCATTATCATAATACTGCA+TGG | - | chr3_3:78760317-78760336 | None:intergenic | 30.0% | |
| TGCAATAAAGGAAGTCAAAT+CGG | + | chr3_3:78760579-78760598 | Msa0475500:CDS | 30.0% | |
| AATTCTTCATGACTTCTGAA+AGG | - | chr3_3:78761137-78761156 | None:intergenic | 30.0% | |
| CAATCCAAAGAGATCAATAT+TGG | + | chr3_3:78761258-78761277 | Msa0475500:CDS | 30.0% | |
| ATTCCCAATATTGATCTCTT+TGG | - | chr3_3:78761265-78761284 | None:intergenic | 30.0% | |
| ATGAACAAACAGAATTGCAA+TGG | + | chr3_3:78761342-78761361 | Msa0475500:CDS | 30.0% | |
| TGAGAACAAAGTTGTGTGTA+CGG | - | chr3_3:78757672-78757691 | None:intergenic | 35.0% | |
| GATGAAATTGAAGAGTGGTT+GGG | - | chr3_3:78757734-78757753 | None:intergenic | 35.0% | |
| AGATGAAATTGAAGAGTGGT+TGG | - | chr3_3:78757735-78757754 | None:intergenic | 35.0% | |
| GAGAAGATGAAATTGAAGAG+TGG | - | chr3_3:78757739-78757758 | None:intergenic | 35.0% | |
| CCTGGGAAAGTAAAAGAAAA+AGG | - | chr3_3:78757824-78757843 | None:intergenic | 35.0% | |
| ! | CCTTTTTCTTTTACTTTCCC+AGG | + | chr3_3:78757821-78757840 | Msa0475500:intron | 35.0% |
| !! | TAAACTTGTTGCAACGATCT+AGG | + | chr3_3:78758052-78758071 | Msa0475500:intron | 35.0% |
| ! | AATCAAGTGTTTCTGTCCTA+GGG | - | chr3_3:78758080-78758099 | None:intergenic | 35.0% |
| GAGGGAGGAAAAAAAAATGA+GGG | + | chr3_3:78758143-78758162 | Msa0475500:intron | 35.0% | |
| ! | AGTTCAATCACTTGGTTTGA+AGG | + | chr3_3:78758301-78758320 | Msa0475500:intron | 35.0% |
| ! | GTTCAATCACTTGGTTTGAA+GGG | + | chr3_3:78758302-78758321 | Msa0475500:intron | 35.0% |
| ! | TTCAATCACTTGGTTTGAAG+GGG | + | chr3_3:78758303-78758322 | Msa0475500:intron | 35.0% |
| ! | GAAAATTGACTCTAGTAAGG+AGG | + | chr3_3:78758398-78758417 | Msa0475500:intron | 35.0% |
| !! | TAAGGAGGGTTGATGATTAA+CGG | + | chr3_3:78758413-78758432 | Msa0475500:intron | 35.0% |
| !!! | CTTTTTTCACAAAGTTGGGT+CGG | - | chr3_3:78758561-78758580 | None:intergenic | 35.0% |
| !!! | GAGCCTTTTTTCACAAAGTT+GGG | - | chr3_3:78758565-78758584 | None:intergenic | 35.0% |
| !!! | TGAGCCTTTTTTCACAAAGT+TGG | - | chr3_3:78758566-78758585 | None:intergenic | 35.0% |
| TCCTGAAATAGATGCATTCT+AGG | + | chr3_3:78758604-78758623 | Msa0475500:intron | 35.0% | |
| TCCTAGAATGCATCTATTTC+AGG | - | chr3_3:78758608-78758627 | None:intergenic | 35.0% | |
| GCTTCTCAAATCTTACATCT+TGG | - | chr3_3:78758631-78758650 | None:intergenic | 35.0% | |
| AAGATTTGAGAAGCAACAAG+TGG | + | chr3_3:78758637-78758656 | Msa0475500:intron | 35.0% | |
| !!! | TGCTTTCTTTTTGAAGTGGT+AGG | + | chr3_3:78758787-78758806 | Msa0475500:intron | 35.0% |
| ACCTGTGTATGAAACTACTA+AGG | + | chr3_3:78758876-78758895 | Msa0475500:CDS | 35.0% | |
| TCCTTAGTAGTTTCATACAC+AGG | - | chr3_3:78758880-78758899 | None:intergenic | 35.0% | |
| GTGTATGAAACTACTAAGGA+AGG | + | chr3_3:78758880-78758899 | Msa0475500:CDS | 35.0% | |
| TTCACATTTCTTCAGCTCAT+TGG | + | chr3_3:78759152-78759171 | Msa0475500:intron | 35.0% | |
| TCACATTTCTTCAGCTCATT+GGG | + | chr3_3:78759153-78759172 | Msa0475500:intron | 35.0% | |
| CTACTTTCAACTTTCAAGAG+TGG | + | chr3_3:78759218-78759237 | Msa0475500:intron | 35.0% | |
| GTTCTTAGTATGCAACAGTT+TGG | + | chr3_3:78759291-78759310 | Msa0475500:intron | 35.0% | |
| ! | TCCTTTTTGCTCTGATACAA+TGG | - | chr3_3:78759761-78759780 | None:intergenic | 35.0% |
| TCAACCGTACACGAATATAA+TGG | - | chr3_3:78759806-78759825 | None:intergenic | 35.0% | |
| AGGAACAGCAAAAACAAAGA+GGG | + | chr3_3:78759850-78759869 | Msa0475500:CDS | 35.0% | |
| AAGCGTGATTTCTTAGACTT+CGG | - | chr3_3:78760022-78760041 | None:intergenic | 35.0% | |
| CAGCATTGTCAGTGTTAATA+CGG | - | chr3_3:78760090-78760109 | None:intergenic | 35.0% | |
| GATGGAGCAAAGATCAATAA+TGG | + | chr3_3:78760112-78760131 | Msa0475500:CDS | 35.0% | |
| TGGAGCAAAGATCAATAATG+GGG | + | chr3_3:78760114-78760133 | Msa0475500:CDS | 35.0% | |
| GCCATGCAGTATTATGATAA+TGG | + | chr3_3:78760313-78760332 | Msa0475500:CDS | 35.0% | |
| AGAGACATTAGCTGCAATAA+AGG | + | chr3_3:78760567-78760586 | Msa0475500:CDS | 35.0% | |
| ! | TTCAGATTTGATTTCCTGGA+TGG | - | chr3_3:78760173-78760192 | None:intergenic | 35.0% |
| ! | TTCAGATTTGATTTCCTGGA+TGG | - | chr3_3:78760173-78760192 | None:intergenic | 35.0% |
| ! | GCCATGACAAATTCTGAAAA+CGG | + | chr3_3:78760940-78760959 | Msa0475500:CDS | 35.0% |
| ! | TCCGTTTTCAGAATTTGTCA+TGG | - | chr3_3:78760944-78760963 | None:intergenic | 35.0% |
| TCAGAAGTCATGAAGAATTC+TGG | + | chr3_3:78761138-78761157 | Msa0475500:CDS | 35.0% | |
| CAGAAGTCATGAAGAATTCT+GGG | + | chr3_3:78761139-78761158 | Msa0475500:CDS | 35.0% | |
| ACAGAATTGCAATGGAGATA+TGG | + | chr3_3:78761350-78761369 | Msa0475500:CDS | 35.0% | |
| TGAAGTGTGAGATTAGTGTC+AGG | - | chr3_3:78757442-78757461 | None:intergenic | 40.0% | |
| TTGGAAATCTTCGTTAGTGG+TGG | - | chr3_3:78757780-78757799 | None:intergenic | 40.0% | |
| ACCACTAACGAAGATTTCCA+AGG | + | chr3_3:78757779-78757798 | Msa0475500:CDS | 40.0% | |
| ACCTTGGAAATCTTCGTTAG+TGG | - | chr3_3:78757783-78757802 | None:intergenic | 40.0% | |
| ! | GAATCAAGTGTTTCTGTCCT+AGG | - | chr3_3:78758081-78758100 | None:intergenic | 40.0% |
| GGAGGGAGGAAAAAAAAATG+AGG | + | chr3_3:78758142-78758161 | Msa0475500:intron | 40.0% | |
| ! | GAGGGGTCAGAATTTCTTTT+TGG | + | chr3_3:78758185-78758204 | Msa0475500:intron | 40.0% |
| CGACCCAACTTTGTGAAAAA+AGG | + | chr3_3:78758559-78758578 | Msa0475500:intron | 40.0% | |
| CTTTGTGAAAAAAGGCTCAG+TGG | + | chr3_3:78758567-78758586 | Msa0475500:intron | 40.0% | |
| !! | GCCGATTTAGGTTTTCTCTA+AGG | + | chr3_3:78758659-78758678 | Msa0475500:intron | 40.0% |
| TCTGTGCATACTCTTGCAAT+TGG | - | chr3_3:78758840-78758859 | None:intergenic | 40.0% | |
| TGACCTGAAAGAAGGTTCAT+GGG | - | chr3_3:78758911-78758930 | None:intergenic | 40.0% | |
| TTGACCTGAAAGAAGGTTCA+TGG | - | chr3_3:78758912-78758931 | None:intergenic | 40.0% | |
| ATCACTGTTGACCTGAAAGA+AGG | - | chr3_3:78758919-78758938 | None:intergenic | 40.0% | |
| GTTCGGTATGATTCTTTGAC+TGG | + | chr3_3:78758949-78758968 | Msa0475500:CDS | 40.0% | |
| TTGATGGAGTTGGCTAAAAC+TGG | + | chr3_3:78759018-78759037 | Msa0475500:CDS | 40.0% | |
| !! | TAATATTGGTGACGAGCTCA+CGG | - | chr3_3:78759410-78759429 | None:intergenic | 40.0% |
| ! | GTTTTCTTCCAGCATGAAAC+TGG | + | chr3_3:78759683-78759702 | Msa0475500:intron | 40.0% |
| GCCATTGTATCAGAGCAAAA+AGG | + | chr3_3:78759757-78759776 | Msa0475500:CDS | 40.0% | |
| GGCACCATTATATTCGTGTA+CGG | + | chr3_3:78759799-78759818 | Msa0475500:CDS | 40.0% | |
| TATTCGTGTACGGTTGACAT+TGG | + | chr3_3:78759809-78759828 | Msa0475500:CDS | 40.0% | |
| ATTGGAGGGATGCTCTATAT+TGG | + | chr3_3:78759827-78759846 | Msa0475500:CDS | 40.0% | |
| GAGGAACAGCAAAAACAAAG+AGG | + | chr3_3:78759849-78759868 | Msa0475500:CDS | 40.0% | |
| AGCTAATAAAGCAGTTCTCG+CGG | - | chr3_3:78759891-78759910 | None:intergenic | 40.0% | |
| !!! | AAACTGGTTTTCAGAAGCCT+GGG | - | chr3_3:78759930-78759949 | None:intergenic | 40.0% |
| TGTCATTCCATCCCGAAAAA+GGG | + | chr3_3:78759961-78759980 | Msa0475500:CDS | 40.0% | |
| ! | TAGATTCCGTTGCCCTTTTT+CGG | - | chr3_3:78759976-78759995 | None:intergenic | 40.0% |
| AACGGAATCTATTGCTGATG+AGG | + | chr3_3:78759985-78760004 | Msa0475500:CDS | 40.0% | |
| CGTATTAACACTGACAATGC+TGG | + | chr3_3:78760088-78760107 | Msa0475500:CDS | 40.0% | |
| GCAAGTGCTAATGATGAATC+TGG | + | chr3_3:78760148-78760167 | Msa0475500:CDS | 40.0% | |
| ! | CTTCAGATTTGATTTCCTGG+AGG | - | chr3_3:78760174-78760193 | None:intergenic | 40.0% |
| ! | CTGCTTCAGATTTGATTTCC+TGG | - | chr3_3:78760177-78760196 | None:intergenic | 40.0% |
| CATGAGAAAGAGACATTAGC+TGG | + | chr3_3:78760250-78760269 | Msa0475500:CDS | 40.0% | |
| ! | CTTCAGATTTGATTTCCTGG+AGG | - | chr3_3:78760174-78760193 | None:intergenic | 40.0% |
| ! | CTGCTTCAGATTTGATTTCC+TGG | - | chr3_3:78760177-78760196 | None:intergenic | 40.0% |
| CATGAGAAAGAGACATTAGC+TGG | + | chr3_3:78760250-78760269 | Msa0475500:CDS | 40.0% | |
| GAATTCTTCATGGCTTCTGA+AGG | - | chr3_3:78760409-78760428 | None:intergenic | 40.0% | |
| ! | GCCATGAAGAATTCTGAGAA+CGG | + | chr3_3:78760415-78760434 | Msa0475500:CDS | 40.0% |
| TCCGTTCTCAGAATTCTTCA+TGG | - | chr3_3:78760419-78760438 | None:intergenic | 40.0% | |
| CATGAGAAAGAGACATTAGC+TGG | + | chr3_3:78760250-78760269 | Msa0475500:CDS | 40.0% | |
| ! | CTTCAGATTTAACTTCCTGG+AGG | - | chr3_3:78760480-78760499 | None:intergenic | 40.0% |
| ! | CTGCTTCAGATTTAACTTCC+TGG | - | chr3_3:78760483-78760502 | None:intergenic | 40.0% |
| ! | TTCAGATTTGACTTCCTGGA+TGG | - | chr3_3:78760689-78760708 | None:intergenic | 40.0% |
| ! | CTGCTTCAGATTTGATTTCC+TGG | - | chr3_3:78760177-78760196 | None:intergenic | 40.0% |
| ! | CTGCTTCAGATTTGATTTCC+TGG | - | chr3_3:78760177-78760196 | None:intergenic | 40.0% |
| TTGTCATGGCTTCATCTGAA+GGG | - | chr3_3:78760930-78760949 | None:intergenic | 40.0% | |
| TTTGTCATGGCTTCATCTGA+AGG | - | chr3_3:78760931-78760950 | None:intergenic | 40.0% | |
| ! | CTGCTTCAGATTTGATTTCC+TGG | - | chr3_3:78760177-78760196 | None:intergenic | 40.0% |
| AATTCGTCATGGCTTCTGAA+CGG | - | chr3_3:78761035-78761054 | None:intergenic | 40.0% | |
| TCTGTTCTCAGAATTCGTCA+TGG | - | chr3_3:78761046-78761065 | None:intergenic | 40.0% | |
| CATGAGAAAGAGACATTAGC+TGG | + | chr3_3:78760250-78760269 | Msa0475500:CDS | 40.0% | |
| ! | CTGCTTCAGATTTGATTTCC+TGG | - | chr3_3:78760177-78760196 | None:intergenic | 40.0% |
| ACAAAGTTGTGTGTACGGTG+AGG | - | chr3_3:78757667-78757686 | None:intergenic | 45.0% | |
| !! | ATCTTCGTTAGTGGTGGACA+TGG | - | chr3_3:78757774-78757793 | None:intergenic | 45.0% |
| GCGTTGCAAAAACAAACCCT+GGG | - | chr3_3:78757841-78757860 | None:intergenic | 45.0% | |
| TGCGTTGCAAAAACAAACCC+TGG | - | chr3_3:78757842-78757861 | None:intergenic | 45.0% | |
| ! | GTGATGGAAGATAAAGGGAG+TGG | + | chr3_3:78758111-78758130 | Msa0475500:intron | 45.0% |
| ATGGAAGATAAAGGGAGTGG+AGG | + | chr3_3:78758114-78758133 | Msa0475500:intron | 45.0% | |
| TGGAAGATAAAGGGAGTGGA+GGG | + | chr3_3:78758115-78758134 | Msa0475500:intron | 45.0% | |
| !!! | AGGGATTCCCTCACTTTTTG+TGG | + | chr3_3:78758162-78758181 | Msa0475500:intron | 45.0% |
| !!! | GGGATTCCCTCACTTTTTGT+GGG | + | chr3_3:78758163-78758182 | Msa0475500:intron | 45.0% |
| !!! | ATTCCCTCACTTTTTGTGGG+AGG | + | chr3_3:78758166-78758185 | Msa0475500:intron | 45.0% |
| !!! | TTCCCTCACTTTTTGTGGGA+GGG | + | chr3_3:78758167-78758186 | Msa0475500:intron | 45.0% |
| ! | AATCACTTGGTTTGAAGGGG+TGG | + | chr3_3:78758306-78758325 | Msa0475500:intron | 45.0% |
| ! | TATCCTTGGACAGGGTTTTG+TGG | + | chr3_3:78758517-78758536 | Msa0475500:intron | 45.0% |
| ! | AAGCAACAAGTGGCCGATTT+AGG | + | chr3_3:78758647-78758666 | Msa0475500:intron | 45.0% |
| ! | CAAGAGTATGCACAGAAAGC+AGG | + | chr3_3:78758844-78758863 | Msa0475500:CDS | 45.0% |
| TATGCACAGAAAGCAGGACT+CGG | + | chr3_3:78758850-78758869 | Msa0475500:CDS | 45.0% | |
| CTGAAAGAAGGTTCATGGGA+AGG | - | chr3_3:78758907-78758926 | None:intergenic | 45.0% | |
| CTTCCCATGAACCTTCTTTC+AGG | + | chr3_3:78758905-78758924 | Msa0475500:CDS | 45.0% | |
| ! | AGAGGTTGCTTTGATGGAGT+TGG | + | chr3_3:78759008-78759027 | Msa0475500:CDS | 45.0% |
| !! | AATATTGGTGACGAGCTCAC+GGG | - | chr3_3:78759409-78759428 | None:intergenic | 45.0% |
| TGCACAATCCAGTTTCATGC+TGG | - | chr3_3:78759694-78759713 | None:intergenic | 45.0% | |
| AAAAAGGATGACACACCACC+AGG | + | chr3_3:78759773-78759792 | Msa0475500:CDS | 45.0% | |
| GAATATAATGGTGCCCTACC+TGG | - | chr3_3:78759794-78759813 | None:intergenic | 45.0% | |
| TATCCAGACAAATGCATCCC+AGG | + | chr3_3:78759910-78759929 | Msa0475500:CDS | 45.0% | |
| !!! | CAAACTGGTTTTCAGAAGCC+TGG | - | chr3_3:78759931-78759950 | None:intergenic | 45.0% |
| ! | CAGGCTTCTGAAAACCAGTT+TGG | + | chr3_3:78759929-78759948 | Msa0475500:CDS | 45.0% |
| TGACAGTCAAATGGCCAAAC+TGG | - | chr3_3:78759946-78759965 | None:intergenic | 45.0% | |
| GGGATGGAATGACAGTCAAA+TGG | - | chr3_3:78759955-78759974 | None:intergenic | 45.0% | |
| CTGTCATTCCATCCCGAAAA+AGG | + | chr3_3:78759960-78759979 | Msa0475500:CDS | 45.0% | |
| ! | AGATTCCGTTGCCCTTTTTC+GGG | - | chr3_3:78759975-78759994 | None:intergenic | 45.0% |
| !! | CGGCGCTTCTTATTTCTATG+TGG | - | chr3_3:78760070-78760089 | None:intergenic | 45.0% |
| AACACTGACAATGCTGGTGA+TGG | + | chr3_3:78760094-78760113 | Msa0475500:CDS | 45.0% | |
| ! | CAATAATGGGGCAGAATCAC+TGG | + | chr3_3:78760126-78760145 | Msa0475500:CDS | 45.0% |
| TAATGATGAATCTGGCCTCC+AGG | + | chr3_3:78760156-78760175 | Msa0475500:CDS | 45.0% | |
| ! | ATCTGAAGCAGCATTCCCTT+CGG | + | chr3_3:78760186-78760205 | Msa0475500:CDS | 45.0% |
| AATACTGCATGGCTTCCGAA+GGG | - | chr3_3:78760306-78760325 | None:intergenic | 45.0% | |
| TAATACTGCATGGCTTCCGA+AGG | - | chr3_3:78760307-78760326 | None:intergenic | 45.0% | |
| GAATTCTGCATGGCTTCATC+TGG | - | chr3_3:78760514-78760533 | None:intergenic | 45.0% | |
| ! | GCCATGCAGAATTCTGAGAA+CGG | + | chr3_3:78760520-78760539 | Msa0475500:CDS | 45.0% |
| TCCGTTCTCAGAATTCTGCA+TGG | - | chr3_3:78760524-78760543 | None:intergenic | 45.0% | |
| TCTGCATGGCTTCATCTGAA+GGG | - | chr3_3:78760615-78760634 | None:intergenic | 45.0% | |
| TTCTGCATGGCTTCATCTGA+AGG | - | chr3_3:78760616-78760635 | None:intergenic | 45.0% | |
| ! | GCCATGCAGAATTCTGAGAA+CGG | + | chr3_3:78760520-78760539 | Msa0475500:CDS | 45.0% |
| TCCGTTCTCAGAATTCTGCA+TGG | - | chr3_3:78760524-78760543 | None:intergenic | 45.0% | |
| AGAAACATTAGCTGCCATCC+AGG | + | chr3_3:78760672-78760691 | Msa0475500:CDS | 45.0% | |
| ! | CTGCTTCAGATTTGACTTCC+TGG | - | chr3_3:78760693-78760712 | None:intergenic | 45.0% |
| TCTGCATGGCTTCATCTGAA+GGG | - | chr3_3:78760615-78760634 | None:intergenic | 45.0% | |
| TTCTGCATGGCTTCATCTGA+AGG | - | chr3_3:78760616-78760635 | None:intergenic | 45.0% | |
| ! | GCCATGCAGAATTCTGAGAA+CGG | + | chr3_3:78760520-78760539 | Msa0475500:CDS | 45.0% |
| ! | CCATGCAGAATTCTGAGAAC+GGG | + | chr3_3:78760521-78760540 | Msa0475500:CDS | 45.0% |
| ! | CATGCAGAATTCTGAGAACG+GGG | + | chr3_3:78760522-78760541 | Msa0475500:CDS | 45.0% |
| TTCTGCATCGCTTCATCTGA+AGG | - | chr3_3:78760826-78760845 | None:intergenic | 45.0% | |
| ! | GCGATGCAGAATTCTGAGAA+CGG | + | chr3_3:78760835-78760854 | Msa0475500:CDS | 45.0% |
| ! | CGATGCAGAATTCTGAGAAC+GGG | + | chr3_3:78760836-78760855 | Msa0475500:CDS | 45.0% |
| ! | GATGCAGAATTCTGAGAACG+GGG | + | chr3_3:78760837-78760856 | Msa0475500:CDS | 45.0% |
| !! | AGAAGTGTCATTTGCTCCCA+AGG | + | chr3_3:78761293-78761312 | Msa0475500:CDS | 45.0% |
| !! | GAAGTGTCATTTGCTCCCAA+GGG | + | chr3_3:78761294-78761313 | Msa0475500:CDS | 45.0% |
| ATCGCCAGTATGTATCCCTT+GGG | - | chr3_3:78761312-78761331 | None:intergenic | 45.0% | |
| TGCAATGGAGATATGGTCTC+TGG | + | chr3_3:78761357-78761376 | Msa0475500:CDS | 45.0% | |
| TGCAACGATCTAGGAACCCT+AGG | + | chr3_3:78758061-78758080 | Msa0475500:intron | 50.0% | |
| ATAAAGGGAGTGGAGGGCTT+TGG | + | chr3_3:78758121-78758140 | Msa0475500:intron | 50.0% | |
| !!! | TCCCTCACTTTTTGTGGGAG+GGG | + | chr3_3:78758168-78758187 | Msa0475500:intron | 50.0% |
| ACCCCTCCCACAAAAAGTGA+GGG | - | chr3_3:78758172-78758191 | None:intergenic | 50.0% | |
| AAGCCACAAAACCCTGTCCA+AGG | - | chr3_3:78758523-78758542 | None:intergenic | 50.0% | |
| ! | AGCTGCAGAGGTTGCTTTGA+TGG | + | chr3_3:78759002-78759021 | Msa0475500:CDS | 50.0% |
| TCTGCAACGGTCACTACACT+CGG | - | chr3_3:78759126-78759145 | None:intergenic | 50.0% | |
| TATAATGGTGCCCTACCTGG+TGG | - | chr3_3:78759791-78759810 | None:intergenic | 50.0% | |
| TCGTGTACGGTTGACATTGG+AGG | + | chr3_3:78759812-78759831 | Msa0475500:CDS | 50.0% | |
| CGTGTACGGTTGACATTGGA+GGG | + | chr3_3:78759813-78759832 | Msa0475500:CDS | 50.0% | |
| GGAGGGATGCTCTATATTGG+AGG | + | chr3_3:78759830-78759849 | Msa0475500:CDS | 50.0% | |
| AAGCCTGGGATGCATTTGTC+TGG | - | chr3_3:78759916-78759935 | None:intergenic | 50.0% | |
| TCCATCCCGAAAAAGGGCAA+CGG | + | chr3_3:78759967-78759986 | Msa0475500:CDS | 50.0% | |
| ! | CTCCAGATTTGACTTCCTGG+AGG | - | chr3_3:78760378-78760397 | None:intergenic | 50.0% |
| ! | CTGCTCCAGATTTGACTTCC+TGG | - | chr3_3:78760381-78760400 | None:intergenic | 50.0% |
| TCTGCATGGCTTCATCTGGA+GGG | - | chr3_3:78760510-78760529 | None:intergenic | 50.0% | |
| TTCTGCATGGCTTCATCTGG+AGG | - | chr3_3:78760511-78760530 | None:intergenic | 50.0% | |
| CCCGTTCTCAGAATTCTGCA+TGG | - | chr3_3:78760734-78760753 | None:intergenic | 50.0% | |
| AGAGACGTTAGCTACCATCC+AGG | + | chr3_3:78760777-78760796 | Msa0475500:CDS | 50.0% | |
| AGAGACATTAGCTGCCATCC+AGG | + | chr3_3:78760882-78760901 | Msa0475500:CDS | 50.0% | |
| AGAGACATTAGCTGCAGTCC+AGG | + | chr3_3:78760987-78761006 | Msa0475500:CDS | 50.0% | |
| AGAGACATTAGCTGGCATCC+AGG | + | chr3_3:78761089-78761108 | Msa0475500:CDS | 50.0% | |
| TGCTCCCAAGGGATACATAC+TGG | + | chr3_3:78761305-78761324 | Msa0475500:CDS | 50.0% | |
| CATCGCCAGTATGTATCCCT+TGG | - | chr3_3:78761313-78761332 | None:intergenic | 50.0% | |
| ATACATACTGGCGATGAGCG+TGG | + | chr3_3:78761317-78761336 | Msa0475500:CDS | 50.0% | |
| !! | AGTGGTGGACATGGTGAGAG+AGG | - | chr3_3:78757765-78757784 | None:intergenic | 55.0% |
| GACCCCTCCCACAAAAAGTG+AGG | - | chr3_3:78758173-78758192 | None:intergenic | 55.0% | |
| TGACGAGCTCACGGGTAAGA+AGG | - | chr3_3:78759401-78759420 | None:intergenic | 55.0% | |
| AGGATGACACACCACCAGGT+AGG | + | chr3_3:78759777-78759796 | Msa0475500:CDS | 55.0% | |
| GGATGACACACCACCAGGTA+GGG | + | chr3_3:78759778-78759797 | Msa0475500:CDS | 55.0% | |
| !!! | TCCGTTGCCCTTTTTCGGGA+TGG | - | chr3_3:78759971-78759990 | None:intergenic | 55.0% |
| ! | AGAGACATTAGCTGGCCTCC+AGG | + | chr3_3:78760258-78760277 | Msa0475500:CDS | 55.0% |
| ! | AGAGACATTAGCTGGCCTCC+AGG | + | chr3_3:78760258-78760277 | Msa0475500:CDS | 55.0% |
| GGCCTCCAGGAAGTCAAATC+TGG | + | chr3_3:78760373-78760392 | Msa0475500:CDS | 55.0% | |
| ! | AGAGACATTAGCTGGCCTCC+AGG | + | chr3_3:78760258-78760277 | Msa0475500:CDS | 55.0% |
| AACGGCGCAGATTCCGACAC+AGG | + | chr3_3:78757641-78757660 | Msa0475500:five_prime_UTR | 60.0% | |
| GTGTACGGTGAGGCCTGTGT+CGG | - | chr3_3:78757657-78757676 | None:intergenic | 60.0% | |
| ! | AAGGGAGTGGAGGGCTTTGG+AGG | + | chr3_3:78758124-78758143 | Msa0475500:intron | 60.0% |
| !! | AGGGAGTGGAGGGCTTTGGA+GGG | + | chr3_3:78758125-78758144 | Msa0475500:intron | 60.0% |
| AGCAGAGCAGTCAGCTGCAG+AGG | + | chr3_3:78758990-78759009 | Msa0475500:CDS | 60.0% | |
| !! | GAGTGGAGGGCTTTGGAGGG+AGG | + | chr3_3:78758128-78758147 | Msa0475500:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 78757429 | 78761386 | 78757429 | ID=Msa0475500;Name=Msa0475500 |
| chr3_3 | mRNA | 78757429 | 78761386 | 78757429 | ID=Msa0475500-mRNA-1;Parent=Msa0475500;Name=Msa0475500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=344|1|0.66|1|1|1|3|0|662 |
| chr3_3 | exon | 78757429 | 78757800 | 78757429 | ID=Msa0475500-mRNA-1:exon:21249;Parent=Msa0475500-mRNA-1 |
| chr3_3 | exon | 78758803 | 78759071 | 78758803 | ID=Msa0475500-mRNA-1:exon:21250;Parent=Msa0475500-mRNA-1 |
| chr3_3 | exon | 78759695 | 78761386 | 78759695 | ID=Msa0475500-mRNA-1:exon:21251;Parent=Msa0475500-mRNA-1 |
| chr3_3 | five_prime_UTR | 78757429 | 78757772 | 78757429 | ID=Msa0475500-mRNA-1:five_prime_utr;Parent=Msa0475500-mRNA-1 |
| chr3_3 | CDS | 78757773 | 78757800 | 78757773 | ID=Msa0475500-mRNA-1:cds;Parent=Msa0475500-mRNA-1 |
| chr3_3 | CDS | 78758803 | 78759071 | 78758803 | ID=Msa0475500-mRNA-1:cds;Parent=Msa0475500-mRNA-1 |
| chr3_3 | CDS | 78759695 | 78761386 | 78759695 | ID=Msa0475500-mRNA-1:cds;Parent=Msa0475500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
