AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1125490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1125490 MtrunA17_Chr7g0266281 92.365 406 2 3 1 406 1 377 0.0 756
Msa1125490 MtrunA17_Chr1g0154671 65.700 414 94 3 2 406 4 378 0.0 555
Msa1125490 MtrunA17_Chr8g0351021 29.252 294 177 8 89 382 75 337 3.31e-32 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1125490 AT1G80950.1 57.674 430 115 5 5 409 1 388 2.08e-174 493
Msa1125490 AT1G80950.2 57.611 427 114 5 5 406 1 385 3.30e-173 490
Msa1125490 AT2G45670.1 29.430 316 169 8 67 370 78 351 5.83e-35 136
Msa1125490 AT2G45670.2 26.222 225 119 6 67 279 78 267 1.25e-11 65.5

Find 170 sgRNAs with CRISPR-Local

Find 443 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGCTGCATTTATCTTTC+TGG 0.085911 7_3:-77003178 Msa1125490:three_prime_UTR
GCAATAATTAATGATTAATT+AGG 0.116226 7_3:+77009578 None:intergenic
AACATTATCGGCATACAATT+TGG 0.149590 7_3:+77005121 None:intergenic
GAACACCTATGTTAATATTT+TGG 0.155055 7_3:+77003271 None:intergenic
GATGGATAATACTAGTTAAT+TGG 0.175907 7_3:+77009555 None:intergenic
CCCGCTTGGGATTCCATATC+TGG 0.187030 7_3:-77006424 Msa1125490:CDS
TCGGATTTCAAGGGTGTTTC+AGG 0.208708 7_3:-77007645 Msa1125490:intron
CAGCAATTAAAACACATTAT+TGG 0.234609 7_3:+77003603 None:intergenic
CCTGATGTATCTATAGTTAT+AGG 0.241759 7_3:-77003301 Msa1125490:three_prime_UTR
GTATGGCTCTATTATTTATC+AGG 0.245053 7_3:-77003414 Msa1125490:three_prime_UTR
AGCAATTAAAACACATTATT+GGG 0.270552 7_3:+77003604 None:intergenic
CATTAAAATATACAAGCTTA+TGG 0.271874 7_3:-77003196 Msa1125490:three_prime_UTR
TTGTTCTTCGTCAGGGGCTT+CGG 0.274521 7_3:+77003138 None:intergenic
TCTTGTTCATCTTCACGATT+AGG 0.275081 7_3:+77009097 None:intergenic
CCTGGAAATAGCATCATTAA+TGG 0.282235 7_3:+77007294 None:intergenic
CATACTCCAGAGGCAGTTAT+TGG 0.289794 7_3:+77003341 None:intergenic
TGGTTTATTATGTGGTTTGT+AGG 0.301047 7_3:-77009141 Msa1125490:CDS
GGTGGTGGTTCCGTTTGGTT+TGG 0.307275 7_3:+77009411 None:intergenic
AATTTGATACTTTCTGATAT+CGG 0.308202 7_3:-77003883 Msa1125490:CDS
CAATAATTAATGATTAATTA+GGG 0.315302 7_3:+77009579 None:intergenic
ACCAGGTCTTCCCGTCTCTT+CGG 0.316502 7_3:+77008231 None:intergenic
ACAAGAGGATTATGCTCATT+TGG 0.318547 7_3:-77009080 Msa1125490:CDS
CTATGTTCAGCGGGAATCTA+AGG 0.320808 7_3:-77007670 Msa1125490:CDS
TTCGTCAGGGGCTTCGGGAC+AGG 0.326563 7_3:+77003144 None:intergenic
TATGTTCGCAACGATGTATA+CGG 0.342263 7_3:-77009268 Msa1125490:CDS
TTCCTCTTGTTGGTCTCATC+AGG 0.346722 7_3:-77008001 Msa1125490:intron
CCAGGTCTTCCCGTCTCTTC+GGG 0.351063 7_3:+77008232 None:intergenic
TGAAATTATCAATCGTCTTT+CGG 0.353125 7_3:+77003793 None:intergenic
CCATTAATGATGCTATTTCC+AGG 0.355192 7_3:-77007294 Msa1125490:intron
TGTTCTTCGTCAGGGGCTTC+GGG 0.359664 7_3:+77003139 None:intergenic
GTGGTGGTTCCGTTTGGTTT+GGG 0.361677 7_3:+77009412 None:intergenic
TTAATGGAGCAGATTCATTC+TGG 0.361886 7_3:+77007310 None:intergenic
ACATTATCGGCATACAATTT+GGG 0.362174 7_3:+77005122 None:intergenic
AACTGCCTCTGGAGTATGAT+TGG 0.365179 7_3:-77003336 Msa1125490:three_prime_UTR
TTCTTCTAACTCTTTCAATC+AGG 0.368572 7_3:-77008969 Msa1125490:intron
ATTCAGTGTTGTTCTTCGTC+AGG 0.372626 7_3:+77003130 None:intergenic
GGTGGCGGTGGCGGTGGTGG+TGG 0.377204 7_3:+77009396 None:intergenic
GTGGCTAAGCTTCCTCTTGT+TGG 0.377303 7_3:-77008011 Msa1125490:CDS
TATACAACATTCTGAATTTG+AGG 0.377675 7_3:+77003647 None:intergenic
ACGATGGGAAGAGGAGAGTT+AGG 0.381826 7_3:-77009244 Msa1125490:CDS
GATTCTTGCTGTAACGGTTT+TGG 0.383612 7_3:-77009164 Msa1125490:CDS
TGGCTTGTATATTTATTGTA+TGG 0.386477 7_3:-77003431 Msa1125490:three_prime_UTR
AACGGTGGCGGTGGCGGTGG+TGG 0.387336 7_3:+77009393 None:intergenic
ATTTGATACTTTCTGATATC+GGG 0.387507 7_3:-77003882 Msa1125490:CDS
CTTCTGTTTCATGTCCCTGC+AGG 0.388881 7_3:-77003486 Msa1125490:three_prime_UTR
CCCAAGCGGGGCTAAATCTC+TGG 0.389493 7_3:+77006437 None:intergenic
CTTGTTCATCTTCACGATTA+GGG 0.395614 7_3:+77009098 None:intergenic
ATGTAGTTACACACGAGTTT+TGG 0.395619 7_3:-77003750 Msa1125490:three_prime_UTR
CAAGAGGATTATGCTCATTT+GGG 0.398831 7_3:-77009079 Msa1125490:CDS
TTTAAAATTACAGGAAGTAC+TGG 0.402772 7_3:+77006469 None:intergenic
CTATCCCTCACAGCAGGAAA+TGG 0.406245 7_3:-77005150 Msa1125490:CDS
GCGGTGGTGGTGGTTCCGTT+TGG 0.408754 7_3:+77009406 None:intergenic
ATGGATAATACTAGTTAATT+GGG 0.418354 7_3:+77009556 None:intergenic
ATCTAATCACGTGTCATACT+TGG 0.418603 7_3:-77008200 Msa1125490:CDS
ACGAACGGTGGCGGTGGCGG+TGG 0.419217 7_3:+77009390 None:intergenic
CGATAATGTTAGACGGTTGA+TGG 0.421003 7_3:-77005108 Msa1125490:CDS
TTCAGTGTTGTTCTTCGTCA+GGG 0.421207 7_3:+77003131 None:intergenic
AAGAGGAGAGTTAGGAGCTA+AGG 0.421388 7_3:-77009236 Msa1125490:CDS
TTATTCTTTAAATATATGAA+TGG 0.422575 7_3:-77003707 Msa1125490:three_prime_UTR
ACAGCAAGAATCACTCTAAT+CGG 0.424110 7_3:+77009175 None:intergenic
ATAAGTACTTACCCCAGATA+TGG 0.424825 7_3:+77006411 None:intergenic
TTCATATGCTATCGTATAGT+AGG 0.429441 7_3:+77009531 None:intergenic
ATCTAAGGCATCGGATTTCA+AGG 0.439623 7_3:-77007655 Msa1125490:CDS
TATTGGGTACATTATTTACA+TGG 0.442536 7_3:+77003620 None:intergenic
CATCAACCGTCTAACATTAT+CGG 0.444546 7_3:+77005109 None:intergenic
ACCAGAGATTTAGCCCCGCT+TGG 0.445067 7_3:-77006438 Msa1125490:CDS
GTCACGAACGGTGGCGGTGG+CGG 0.447445 7_3:+77009387 None:intergenic
CTTCCCGTCTCTTCGGGCTG+AGG 0.450315 7_3:+77008238 None:intergenic
CTCCTTCCATTCAAGACTGG+TGG 0.450968 7_3:-77006508 Msa1125490:CDS
AGAAGTGTTATTGTTAAGTG+TGG 0.451603 7_3:-77009046 Msa1125490:CDS
TCTATGAACAACAATGATGA+AGG 0.458558 7_3:-77009473 Msa1125490:exon
GGTTTATTATGTGGTTTGTA+GGG 0.460729 7_3:-77009140 Msa1125490:CDS
GCAGAAGGTACAACCACAAA+TGG 0.460753 7_3:-77006538 Msa1125490:intron
ATGTATCCAATAACTGCCTC+TGG 0.460913 7_3:-77003347 Msa1125490:three_prime_UTR
CTGAGATTATCTTAGATTCA+CGG 0.462834 7_3:+77009628 None:intergenic
TCGTCAGGGGCTTCGGGACA+GGG 0.463846 7_3:+77003145 None:intergenic
GTTCCCAAGCTTTGTTGCTA+AGG 0.464733 7_3:-77008152 Msa1125490:intron
GCGGGGCTAAATCTCTGGTA+AGG 0.469915 7_3:+77006442 None:intergenic
CCAGAGATTTAGCCCCGCTT+GGG 0.471933 7_3:-77006437 Msa1125490:CDS
TTCCTCCTTCCATTCAAGAC+TGG 0.472216 7_3:-77006511 Msa1125490:CDS
TAGCTCCGCCGCGGTGGTGA+TGG 0.474729 7_3:+77009318 None:intergenic
CAAACCTTAGCAACAAAGCT+TGG 0.475847 7_3:+77008148 None:intergenic
ATGCGGCGAATTTCTTCTCT+AGG 0.476450 7_3:+77009290 None:intergenic
GGTGGTGATGGTTGTGGTGG+TGG 0.476569 7_3:+77009330 None:intergenic
ATTATGCTCATTTGGGTGGG+TGG 0.476792 7_3:-77009072 Msa1125490:CDS
TGCTGTGAGGGATAGTATAT+AGG 0.479278 7_3:+77005158 None:intergenic
ACTGCCTCTGGAGTATGATT+GGG 0.480482 7_3:-77003335 Msa1125490:three_prime_UTR
TAGAGTGATTCTTGCTGTAA+CGG 0.482759 7_3:-77009170 Msa1125490:CDS
CCGCTTGGGATTCCATATCT+GGG 0.486087 7_3:-77006423 Msa1125490:CDS
AAACCTCAGCCCGAAGAGAC+GGG 0.491484 7_3:-77008241 Msa1125490:CDS
CCCGAAGAGACGGGAAGACC+TGG 0.496793 7_3:-77008232 Msa1125490:CDS
AAACCTTAGCAACAAAGCTT+GGG 0.500224 7_3:+77008149 None:intergenic
AAGGAGGAAATCTCCATTTG+TGG 0.502715 7_3:+77006525 None:intergenic
GTGGTTCCGTTTGGTTTGGG+TGG 0.506330 7_3:+77009415 None:intergenic
ATCTACCATGCTGCTCTCAA+TGG 0.506695 7_3:-77003844 Msa1125490:CDS
CATTTATCTTTCTGGTGCTG+AGG 0.507529 7_3:-77003170 Msa1125490:three_prime_UTR
CAAACCTCAGCCCGAAGAGA+CGG 0.512886 7_3:-77008242 Msa1125490:CDS
ATGCTCATTTGGGTGGGTGG+AGG 0.521233 7_3:-77009069 Msa1125490:CDS
GTATACGGGACGATGGGAAG+AGG 0.523782 7_3:-77009253 Msa1125490:CDS
AACAACAATGATGAAGGGGT+TGG 0.524505 7_3:-77009467 Msa1125490:exon
CCTATAACTATAGATACATC+AGG 0.532371 7_3:+77003301 None:intergenic
ATCGTCACGAACGGTGGCGG+TGG 0.532744 7_3:+77009384 None:intergenic
TGCTATCGTATAGTAGGAGA+TGG 0.533340 7_3:+77009537 None:intergenic
CAAAATCACTCTGATACCAC+TGG 0.534381 7_3:-77004452 Msa1125490:CDS
CTATGAACAACAATGATGAA+GGG 0.536298 7_3:-77009472 Msa1125490:exon
GTCTTGTAGCTCCGCCGCGG+TGG 0.537793 7_3:+77009312 None:intergenic
TCTCTCCAAAATATTAACAT+AGG 0.539595 7_3:-77003276 Msa1125490:three_prime_UTR
CCAGATATGGAATCCCAAGC+GGG 0.540197 7_3:+77006424 None:intergenic
CGCCGCGGTGGTGATGGTTG+TGG 0.540201 7_3:+77009324 None:intergenic
TCAAAACCACCCAAACCAAA+CGG 0.542315 7_3:-77009421 Msa1125490:CDS
CATTGGGAAAACAAACCTGC+AGG 0.542319 7_3:+77003471 None:intergenic
AAATATTAAATAGCAAGAAA+CGG 0.544036 7_3:+77003229 None:intergenic
CGTATCCGAAGAACTAGCAT+TGG 0.545566 7_3:+77003454 None:intergenic
TCTTTCGGACGCAAAACACT+AGG 0.546460 7_3:+77003808 None:intergenic
GAGGATTATGCTCATTTGGG+TGG 0.550330 7_3:-77009076 Msa1125490:CDS
GAAGTGTTATTGTTAAGTGT+GGG 0.550562 7_3:-77009045 Msa1125490:CDS
AACCACCAGTCTTGAATGGA+AGG 0.550568 7_3:+77006506 None:intergenic
GATTGATAATTTCATGATCC+CGG 0.550860 7_3:-77003784 Msa1125490:exon
ATCATCCATTTCCTGCTGTG+AGG 0.561663 7_3:+77005145 None:intergenic
TCATCCATTTCCTGCTGTGA+GGG 0.563139 7_3:+77005146 None:intergenic
TGGTTGCATCTATGTTCAGC+GGG 0.565814 7_3:-77007679 Msa1125490:CDS
ACTACATATCAATTGACTCC+GGG 0.567747 7_3:+77003766 None:intergenic
ATGTTCGCAACGATGTATAC+GGG 0.570685 7_3:-77009267 Msa1125490:CDS
GTATCCGAAGAACTAGCATT+GGG 0.570806 7_3:+77003455 None:intergenic
ATGCTAGTTCTTCGGATACG+TGG 0.572102 7_3:-77003451 Msa1125490:three_prime_UTR
AACGATGTATACGGGACGAT+GGG 0.575513 7_3:-77009259 Msa1125490:CDS
AGGATTATGCTCATTTGGGT+GGG 0.576961 7_3:-77009075 Msa1125490:CDS
ACGATCGTCACGAACGGTGG+CGG 0.579269 7_3:+77009381 None:intergenic
AGTGAATCGGATTTGAGAAG+AGG 0.583170 7_3:+77009358 None:intergenic
TACATCGTTGCGAACATATG+CGG 0.583809 7_3:+77009273 None:intergenic
AGCAACAAAGCTTGGGAACG+AGG 0.583959 7_3:+77008156 None:intergenic
TCGGACGCAAAACACTAGGC+AGG 0.584355 7_3:+77003812 None:intergenic
CGCGGTGGTGATGGTTGTGG+TGG 0.594441 7_3:+77009327 None:intergenic
TTGGTTGCATCTATGTTCAG+CGG 0.596574 7_3:-77007680 Msa1125490:CDS
CGGGGCTAAATCTCTGGTAA+GGG 0.598199 7_3:+77006443 None:intergenic
TAATCGTGAAGATGAACAAG+AGG 0.604391 7_3:-77009095 Msa1125490:CDS
TCAGTGTTGTTCTTCGTCAG+GGG 0.605444 7_3:+77003132 None:intergenic
TGAATGGACAGCTCACGTGA+GGG 0.605552 7_3:-77003691 Msa1125490:three_prime_UTR
TATATACTATCCCTCACAGC+AGG 0.605563 7_3:-77005156 Msa1125490:CDS
CGCTTGGGATTCCATATCTG+GGG 0.609507 7_3:-77006422 Msa1125490:intron
AACTACATATCAATTGACTC+CGG 0.612495 7_3:+77003765 None:intergenic
TCAGCGGGAATCTAAGGCAT+CGG 0.612555 7_3:-77007664 Msa1125490:CDS
ATGAATGGACAGCTCACGTG+AGG 0.613596 7_3:-77003692 Msa1125490:three_prime_UTR
TATGAACAACAATGATGAAG+GGG 0.614604 7_3:-77009471 Msa1125490:exon
AAACAGAAGATTCAGATACA+TGG 0.616949 7_3:+77003500 None:intergenic
GGTGGTGGAAGAGAGTGAAT+CGG 0.617416 7_3:+77009345 None:intergenic
CACCACAACCATCACCACCG+CGG 0.617640 7_3:-77009326 Msa1125490:CDS
CAACGATGTATACGGGACGA+TGG 0.619929 7_3:-77009260 Msa1125490:CDS
GAATGGACAGCTCACGTGAG+GGG 0.644731 7_3:-77003690 Msa1125490:three_prime_UTR
TGATTAGATATTATTACACC+AGG 0.645827 7_3:+77008214 None:intergenic
ATTGGGAAAACAAACCTGCA+GGG 0.647101 7_3:+77003472 None:intergenic
AAGAGGACGATCGTCACGAA+CGG 0.648748 7_3:+77009375 None:intergenic
TATTACCATTGAGAGCAGCA+TGG 0.649402 7_3:+77003839 None:intergenic
AGGACGATCGTCACGAACGG+TGG 0.650813 7_3:+77009378 None:intergenic
TGTATGCCGATAATGTTAGA+CGG 0.651296 7_3:-77005115 Msa1125490:CDS
TGATACCACTGGAAAGTCTG+TGG 0.654924 7_3:-77004441 Msa1125490:CDS
CACCAGTCTTGAATGGAAGG+AGG 0.655112 7_3:+77006509 None:intergenic
CACCTGATGAGACCAACAAG+AGG 0.657451 7_3:+77007999 None:intergenic
CCCAGATATGGAATCCCAAG+CGG 0.662668 7_3:+77006423 None:intergenic
GCTGAACATAGATGCAACCA+AGG 0.665052 7_3:+77007682 None:intergenic
CACAACCATCACCACCGCGG+CGG 0.665087 7_3:-77009323 Msa1125490:CDS
TCTAAGGCATCGGATTTCAA+GGG 0.666480 7_3:-77007654 Msa1125490:CDS
TAGACGGTTGATGGCTACTG+AGG 0.676874 7_3:-77005099 Msa1125490:intron
TATAATTTACAAACTGACAG+AGG 0.676920 7_3:+77005198 None:intergenic
AAATCCCAATCATACTCCAG+AGG 0.683916 7_3:+77003331 None:intergenic
TCCATCTATGAAGAGATCAG+TGG 0.684513 7_3:-77008030 Msa1125490:intron
GACAGAGGAGAAATATCACA+TGG 0.695658 7_3:+77005213 None:intergenic
TAGGTCTTGTAGCTCCGCCG+CGG 0.700267 7_3:+77009309 None:intergenic
CAGATATGGAATCCCAAGCG+GGG 0.704694 7_3:+77006425 None:intergenic
GTCATCCACAGACTTTCCAG+TGG 0.716069 7_3:+77004436 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATAATTAATGATTAATTA+GGG + chr7_3:77003170-77003189 None:intergenic 10.0%
!!! TAATTTTAAGATAAATTTCA+AGG + chr7_3:77006988-77007007 None:intergenic 10.0%
!! ATAAATTATATATTCAAACA+TGG - chr7_3:77008080-77008099 Msa1125490:intron 10.0%
!! TTATTCTTTAAATATATGAA+TGG - chr7_3:77009039-77009058 Msa1125490:CDS 10.0%
!! GCAATAATTAATGATTAATT+AGG + chr7_3:77003171-77003190 None:intergenic 15.0%
!!! TTTTCATTTTTGGATTTTAT+TGG - chr7_3:77003746-77003765 Msa1125490:three_prime_UTR 15.0%
!!! TTTTTATTAGCATCTTTAAT+TGG - chr7_3:77003898-77003917 Msa1125490:intron 15.0%
!!! TTTTATTAGCATCTTTAATT+GGG - chr7_3:77003899-77003918 Msa1125490:intron 15.0%
!!! TTACTTTGAAATATAAGATA+TGG - chr7_3:77006634-77006653 Msa1125490:intron 15.0%
!!! TACTTTGAAATATAAGATAT+GGG - chr7_3:77006635-77006654 Msa1125490:intron 15.0%
!!! CATTTTTATGCTAATTTAAT+TGG - chr7_3:77007438-77007457 Msa1125490:intron 15.0%
!! AGTAATGAGATAAAAATAAA+AGG + chr7_3:77008609-77008628 None:intergenic 15.0%
!! TACATTAGAAATAATCAAAA+AGG + chr7_3:77008826-77008845 None:intergenic 15.0%
!! AAATATTAAATAGCAAGAAA+CGG + chr7_3:77009520-77009539 None:intergenic 15.0%
!!! TAATGATTAATTAGGGTTTT+TGG + chr7_3:77003163-77003182 None:intergenic 20.0%
!! ATGGATAATACTAGTTAATT+GGG + chr7_3:77003193-77003212 None:intergenic 20.0%
!! TTGTTCAATTTCAATTCATT+AGG - chr7_3:77003829-77003848 Msa1125490:CDS 20.0%
!! TTATTATGAAGAAGTAAAGT+TGG - chr7_3:77003980-77003999 Msa1125490:intron 20.0%
!! ACAGATATATATGTTCATTA+TGG + chr7_3:77004642-77004661 None:intergenic 20.0%
!! AACACATGAATATAACTAAA+AGG + chr7_3:77005291-77005310 None:intergenic 20.0%
!!! TTTTAAAAACAACAGACATT+GGG + chr7_3:77005906-77005925 None:intergenic 20.0%
!!! ATTTTAAAAACAACAGACAT+TGG + chr7_3:77005907-77005926 None:intergenic 20.0%
!! AAATATAACTATATGCCTTA+AGG - chr7_3:77006001-77006020 Msa1125490:intron 20.0%
!! ATGAATAATTTGGATAATAC+AGG + chr7_3:77006172-77006191 None:intergenic 20.0%
!! TTTGAGAAACATGAATAATT+TGG + chr7_3:77006182-77006201 None:intergenic 20.0%
!!! TAAGGGTATTTTAAAATTAC+AGG + chr7_3:77006289-77006308 None:intergenic 20.0%
!! CCAAAATATAACATATTTAC+CGG + chr7_3:77006444-77006463 None:intergenic 20.0%
!!! ATATGTGTTGAACATATTTT+TGG - chr7_3:77006466-77006485 Msa1125490:CDS 20.0%
!!! TAAACATCCTGTTATTTTAT+CGG - chr7_3:77006497-77006516 Msa1125490:CDS 20.0%
!! AAAATAAATAGTTCCACATT+TGG - chr7_3:77006798-77006817 Msa1125490:intron 20.0%
!! CAGAAATTTACCTTAAAATT+GGG - chr7_3:77006944-77006963 Msa1125490:intron 20.0%
!! TGATACAAATTTAATGATAG+TGG - chr7_3:77007130-77007149 Msa1125490:intron 20.0%
!! ATATCACTTTGTAATGTTAA+CGG + chr7_3:77007235-77007254 None:intergenic 20.0%
!! ATTGTGTTTATTACATAAGA+CGG + chr7_3:77007472-77007491 None:intergenic 20.0%
!! TCAATATTTCTTTCTTGAAA+AGG - chr7_3:77007690-77007709 Msa1125490:CDS 20.0%
!! TATAATTATATGTTCAACCA+TGG - chr7_3:77007997-77008016 Msa1125490:intron 20.0%
!!! CAAAAAAGTGTTTGAATATT+AGG - chr7_3:77008120-77008139 Msa1125490:intron 20.0%
!! AAAATAGTCAATACATAACA+TGG + chr7_3:77008715-77008734 None:intergenic 20.0%
!!! ATGTATTGACTATTTTGTTT+AGG - chr7_3:77008719-77008738 Msa1125490:intron 20.0%
!! AATTTGATACTTTCTGATAT+CGG - chr7_3:77008863-77008882 Msa1125490:intron 20.0%
!! AGCAATTAAAACACATTATT+GGG + chr7_3:77009145-77009164 None:intergenic 20.0%
!! CATTAAAATATACAAGCTTA+TGG - chr7_3:77009550-77009569 Msa1125490:five_prime_UTR 20.0%
! GATGGATAATACTAGTTAAT+TGG + chr7_3:77003194-77003213 None:intergenic 25.0%
!! AGTTTATCATATTCGATTTG+TGG - chr7_3:77003870-77003889 Msa1125490:CDS 25.0%
! CCACAATATAAAAACTTTAG+AGG + chr7_3:77004185-77004204 None:intergenic 25.0%
!!! CCTCTAAAGTTTTTATATTG+TGG - chr7_3:77004182-77004201 Msa1125490:intron 25.0%
! CAAAATATAATGAAACAAGC+TGG + chr7_3:77004417-77004436 None:intergenic 25.0%
! TGATTAGATATTATTACACC+AGG + chr7_3:77004535-77004554 None:intergenic 25.0%
! AAAATCCATAAAACTAAACC+AGG + chr7_3:77004797-77004816 None:intergenic 25.0%
!!! GTTTAGTTTTATGGATTTTG+TGG - chr7_3:77004798-77004817 Msa1125490:intron 25.0%
!!! TGCATTATTTTTTCATTGCA+AGG - chr7_3:77004985-77005004 Msa1125490:intron 25.0%
! AATATGAAAAGACCAACATA+GGG + chr7_3:77005235-77005254 None:intergenic 25.0%
! AAATATGAAAAGACCAACAT+AGG + chr7_3:77005236-77005255 None:intergenic 25.0%
! CAAATAATGTATAGTCTACA+GGG + chr7_3:77005341-77005360 None:intergenic 25.0%
! ACAAATAATGTATAGTCTAC+AGG + chr7_3:77005342-77005361 None:intergenic 25.0%
! ATTATTTGTTTAGTTGCAAC+TGG - chr7_3:77005353-77005372 Msa1125490:intron 25.0%
! AAACCCATATATAATCTAAC+TGG + chr7_3:77005611-77005630 None:intergenic 25.0%
! AGTTAGATTATATATGGGTT+TGG - chr7_3:77005610-77005629 Msa1125490:intron 25.0%
! TTTGTATATTGGAGAGATAA+AGG + chr7_3:77005638-77005657 None:intergenic 25.0%
! GTAAGCTAAAGTTTGTATAT+TGG + chr7_3:77005649-77005668 None:intergenic 25.0%
!! TGGGTCAAAAACATAAATTT+TGG + chr7_3:77005887-77005906 None:intergenic 25.0%
! ATTATGAAGTTACAAGGAAA+TGG + chr7_3:77005976-77005995 None:intergenic 25.0%
! TGTAAGATTATGAAGTTACA+AGG + chr7_3:77005982-77006001 None:intergenic 25.0%
!! TTTCTCAAATATTTTGCAGA+AGG - chr7_3:77006193-77006212 Msa1125490:intron 25.0%
!! TTTAAAATTACAGGAAGTAC+TGG + chr7_3:77006280-77006299 None:intergenic 25.0%
!! CCGGTAAATATGTTATATTT+TGG - chr7_3:77006441-77006460 Msa1125490:CDS 25.0%
!! ATTTTATCGGTGTGTTTATA+TGG - chr7_3:77006510-77006529 Msa1125490:CDS 25.0%
! GCAGAAATTTACCTTAAAAT+TGG - chr7_3:77006943-77006962 Msa1125490:intron 25.0%
!! ACATAGCCAATAAACTTTTT+GGG + chr7_3:77007184-77007203 None:intergenic 25.0%
!! AACATAGCCAATAAACTTTT+TGG + chr7_3:77007185-77007204 None:intergenic 25.0%
! TATCACTTTGTAATGTTAAC+GGG + chr7_3:77007234-77007253 None:intergenic 25.0%
!!! TTCTAAGTTGATCTTAATGT+TGG - chr7_3:77007502-77007521 Msa1125490:intron 25.0%
! TATAATTTACAAACTGACAG+AGG + chr7_3:77007551-77007570 None:intergenic 25.0%
! TGAAAAGGTAGTTAAATAGT+TGG - chr7_3:77007705-77007724 Msa1125490:intron 25.0%
! ATCAACTTCAGCAATAAAAT+AGG + chr7_3:77007740-77007759 None:intergenic 25.0%
!! TTTTTGCATTCAAAAGTTTG+AGG - chr7_3:77007876-77007895 Msa1125490:intron 25.0%
!! TTTTTGCATTCAAAAGTTTG+AGG - chr7_3:77007876-77007895 Msa1125490:intron 25.0%
! TTTACATTATGCTTATACCA+TGG + chr7_3:77008017-77008036 None:intergenic 25.0%
! GTATGAAATTCATATTCGTT+TGG - chr7_3:77008377-77008396 Msa1125490:intron 25.0%
!! CAAATTTTAAACATCCTGAA+TGG - chr7_3:77008498-77008517 Msa1125490:intron 25.0%
! ATTATTCTTTATCACCATTC+AGG + chr7_3:77008574-77008593 None:intergenic 25.0%
!! ATTTTTATCTCATTACTGTC+TGG - chr7_3:77008612-77008631 Msa1125490:intron 25.0%
! CGATGTAACATTTATCTTAT+TGG - chr7_3:77008762-77008781 Msa1125490:intron 25.0%
! ATTTGATACTTTCTGATATC+GGG - chr7_3:77008864-77008883 Msa1125490:intron 25.0%
! TGAAATTATCAATCGTCTTT+CGG + chr7_3:77008956-77008975 None:intergenic 25.0%
! TATACAACATTCTGAATTTG+AGG + chr7_3:77009102-77009121 None:intergenic 25.0%
! TATTGGGTACATTATTTACA+TGG + chr7_3:77009129-77009148 None:intergenic 25.0%
! CAGCAATTAAAACACATTAT+TGG + chr7_3:77009146-77009165 None:intergenic 25.0%
!!! CAATAATGTGTTTTAATTGC+TGG - chr7_3:77009144-77009163 Msa1125490:CDS 25.0%
!! TGGCTTGTATATTTATTGTA+TGG - chr7_3:77009315-77009334 Msa1125490:CDS 25.0%
! TCTCTCCAAAATATTAACAT+AGG - chr7_3:77009470-77009489 Msa1125490:exon 25.0%
!! GAACACCTATGTTAATATTT+TGG + chr7_3:77009478-77009497 None:intergenic 25.0%
CTGAGATTATCTTAGATTCA+CGG + chr7_3:77003121-77003140 None:intergenic 30.0%
TTCATATGCTATCGTATAGT+AGG + chr7_3:77003218-77003237 None:intergenic 30.0%
TCTATGAACAACAATGATGA+AGG - chr7_3:77003273-77003292 Msa1125490:three_prime_UTR 30.0%
CTATGAACAACAATGATGAA+GGG - chr7_3:77003274-77003293 Msa1125490:three_prime_UTR 30.0%
TATGAACAACAATGATGAAG+GGG - chr7_3:77003275-77003294 Msa1125490:three_prime_UTR 30.0%
! TGGTTTATTATGTGGTTTGT+AGG - chr7_3:77003605-77003624 Msa1125490:three_prime_UTR 30.0%
! GGTTTATTATGTGGTTTGTA+GGG - chr7_3:77003606-77003625 Msa1125490:three_prime_UTR 30.0%
!! AGAAGTGTTATTGTTAAGTG+TGG - chr7_3:77003700-77003719 Msa1125490:three_prime_UTR 30.0%
! GAAGTGTTATTGTTAAGTGT+GGG - chr7_3:77003701-77003720 Msa1125490:three_prime_UTR 30.0%
! AGAGCTATGCTTTTCATTTT+TGG - chr7_3:77003736-77003755 Msa1125490:three_prime_UTR 30.0%
TTCTTCTAACTCTTTCAATC+AGG - chr7_3:77003777-77003796 Msa1125490:three_prime_UTR 30.0%
! ATCATATTCGATTTGTGGTA+AGG - chr7_3:77003875-77003894 Msa1125490:CDS 30.0%
ATCTTTAATTGGGATAAGTG+TGG - chr7_3:77003909-77003928 Msa1125490:intron 30.0%
TCTTTAATTGGGATAAGTGT+GGG - chr7_3:77003910-77003929 Msa1125490:intron 30.0%
TAATTTCGCCACAATATTCA+AGG + chr7_3:77004074-77004093 None:intergenic 30.0%
TTGAATATTGTGGCGAAATT+AGG - chr7_3:77004073-77004092 Msa1125490:intron 30.0%
TGAATATTGTGGCGAAATTA+GGG - chr7_3:77004074-77004093 Msa1125490:intron 30.0%
! CAGCAATATAAAGGCTTTAA+GGG + chr7_3:77004129-77004148 None:intergenic 30.0%
AATTTGTGGCAGCAATATAA+AGG + chr7_3:77004138-77004157 None:intergenic 30.0%
! TTGCAGTTGTGATACTTTTA+CGG - chr7_3:77004156-77004175 Msa1125490:intron 30.0%
! TTTTATATTGTGGCTGCAAT+TGG - chr7_3:77004192-77004211 Msa1125490:intron 30.0%
TTTATATTGTGGCTGCAATT+GGG - chr7_3:77004193-77004212 Msa1125490:intron 30.0%
CTAGTTAAGTTTATCGAAAC+TGG - chr7_3:77004290-77004309 Msa1125490:intron 30.0%
ACTATTGGATGTATCTTAGT+TGG - chr7_3:77004374-77004393 Msa1125490:intron 30.0%
GATGTATCTTAGTTGGTTAT+TGG - chr7_3:77004381-77004400 Msa1125490:intron 30.0%
!! AAGATTTTAACAGGACATTC+AGG + chr7_3:77004692-77004711 None:intergenic 30.0%
TGAATGTCCTGTTAAAATCT+TGG - chr7_3:77004691-77004710 Msa1125490:intron 30.0%
!! ATGGAATCCAAGATTTTAAC+AGG + chr7_3:77004701-77004720 None:intergenic 30.0%
!!! CTTTTTTTATTAGTTCCTCC+TGG - chr7_3:77004776-77004795 Msa1125490:intron 30.0%
TGTTCCATTAAGTCAAACTA+GGG - chr7_3:77005307-77005326 Msa1125490:intron 30.0%
!!! GTTATCTTCCTTCCTTTTTT+GGG - chr7_3:77005474-77005493 Msa1125490:intron 30.0%
!!! TTATCTTCCTTCCTTTTTTG+GGG - chr7_3:77005475-77005494 Msa1125490:intron 30.0%
TTCGTGTAGTTTAACTAAGT+TGG - chr7_3:77005539-77005558 Msa1125490:intron 30.0%
TCGTGTAGTTTAACTAAGTT+GGG - chr7_3:77005540-77005559 Msa1125490:intron 30.0%
TACGCCAGTTAGATTATATA+TGG - chr7_3:77005604-77005623 Msa1125490:intron 30.0%
ACGCCAGTTAGATTATATAT+GGG - chr7_3:77005605-77005624 Msa1125490:intron 30.0%
ACTAAATGTGAAGAACCTTA+AGG + chr7_3:77006019-77006038 None:intergenic 30.0%
GAGTTATTCTTTGTCACATA+TGG - chr7_3:77006062-77006081 Msa1125490:intron 30.0%
AAACACACCGATAAAATAAC+AGG + chr7_3:77006507-77006526 None:intergenic 30.0%
! GTGCGACAAATTCATAATTT+TGG - chr7_3:77006536-77006555 Msa1125490:CDS 30.0%
TGAAATATAAGATATGGGTG+AGG - chr7_3:77006640-77006659 Msa1125490:intron 30.0%
! AAAATTCTCTCTAGTTTCCT+AGG - chr7_3:77006679-77006698 Msa1125490:intron 30.0%
! AAATTCTCTCTAGTTTCCTA+GGG - chr7_3:77006680-77006699 Msa1125490:intron 30.0%
! ATGCGTGAGAATGTAAATTT+TGG + chr7_3:77006727-77006746 None:intergenic 30.0%
AAGATCATATCATCTTGAAG+TGG - chr7_3:77006749-77006768 Msa1125490:intron 30.0%
GAAGAAACATATACCAAATG+TGG + chr7_3:77006814-77006833 None:intergenic 30.0%
CATTTGGTATATGTTTCTTC+TGG - chr7_3:77006814-77006833 Msa1125490:intron 30.0%
! AGTTTATTGGCTATGTTGAA+AGG - chr7_3:77007188-77007207 Msa1125490:intron 30.0%
ATCACTTTGTAATGTTAACG+GGG + chr7_3:77007233-77007252 None:intergenic 30.0%
! TTTTTGTTACCCGCATTATA+TGG - chr7_3:77007310-77007329 Msa1125490:CDS 30.0%
ATAGGTATTCCATATAATGC+GGG + chr7_3:77007322-77007341 None:intergenic 30.0%
CATAGGTATTCCATATAATG+CGG + chr7_3:77007323-77007342 None:intergenic 30.0%
!!! TCCTTATTGTTTTGATGTGA+CGG - chr7_3:77007353-77007372 Msa1125490:intron 30.0%
TTGATAAATTGATGAACCCT+AGG - chr7_3:77007388-77007407 Msa1125490:intron 30.0%
ACATTATCGGCATACAATTT+GGG + chr7_3:77007627-77007646 None:intergenic 30.0%
AACATTATCGGCATACAATT+TGG + chr7_3:77007628-77007647 None:intergenic 30.0%
AAGGTAGTTAAATAGTTGGA+AGG - chr7_3:77007709-77007728 Msa1125490:intron 30.0%
!!! GAGAATTGTTTTGATCAATC+TGG - chr7_3:77007830-77007849 Msa1125490:intron 30.0%
!!! GAGAATTGTTTTGATCAATC+TGG - chr7_3:77007830-77007849 Msa1125490:intron 30.0%
! ATTAATTTTGTGACGCTTGT+TGG - chr7_3:77008036-77008055 Msa1125490:intron 30.0%
ATTGCCAGAATAGGTATTTA+CGG - chr7_3:77008211-77008230 Msa1125490:CDS 30.0%
TAAACCGTAAATACCTATTC+TGG + chr7_3:77008218-77008237 None:intergenic 30.0%
TTTCTCGAATATTGTTTCAG+TGG - chr7_3:77008253-77008272 Msa1125490:intron 30.0%
AAAAATAGTGCAAGACTTCT+TGG + chr7_3:77008426-77008445 None:intergenic 30.0%
TACCTGTATTTATAGCCTAA+AGG - chr7_3:77008680-77008699 Msa1125490:intron 30.0%
TACCTTTAGGCTATAAATAC+AGG + chr7_3:77008685-77008704 None:intergenic 30.0%
ATAGTCAATACATAACATGG+AGG + chr7_3:77008712-77008731 None:intergenic 30.0%
!! ATTGACTATTTTGTTTAGGC+AGG - chr7_3:77008723-77008742 Msa1125490:intron 30.0%
!! TTGACTATTTTGTTTAGGCA+GGG - chr7_3:77008724-77008743 Msa1125490:intron 30.0%
! TAATGTATGTTTTGCTTGCA+GGG - chr7_3:77008839-77008858 Msa1125490:intron 30.0%
! GATTGATAATTTCATGATCC+CGG - chr7_3:77008962-77008981 Msa1125490:intron 30.0%
! AACTACATATCAATTGACTC+CGG + chr7_3:77008984-77009003 None:intergenic 30.0%
AAACAGAAGATTCAGATACA+TGG + chr7_3:77009249-77009268 None:intergenic 30.0%
! GTATGGCTCTATTATTTATC+AGG - chr7_3:77009332-77009351 Msa1125490:CDS 30.0%
CCTATAACTATAGATACATC+AGG + chr7_3:77009448-77009467 None:intergenic 30.0%
CCTGATGTATCTATAGTTAT+AGG - chr7_3:77009445-77009464 Msa1125490:CDS 30.0%
!!! GTTTGGGTGGTTTTGAATTT+AGG + chr7_3:77003321-77003340 None:intergenic 35.0%
TATGTTCGCAACGATGTATA+CGG - chr7_3:77003478-77003497 Msa1125490:three_prime_UTR 35.0%
ACAGCAAGAATCACTCTAAT+CGG + chr7_3:77003574-77003593 None:intergenic 35.0%
! TAGAGTGATTCTTGCTGTAA+CGG - chr7_3:77003576-77003595 Msa1125490:three_prime_UTR 35.0%
!! GGTTTTGGTGGTTTATTATG+TGG - chr7_3:77003597-77003616 Msa1125490:three_prime_UTR 35.0%
CTTGTTCATCTTCACGATTA+GGG + chr7_3:77003651-77003670 None:intergenic 35.0%
TCTTGTTCATCTTCACGATT+AGG + chr7_3:77003652-77003671 None:intergenic 35.0%
TAATCGTGAAGATGAACAAG+AGG - chr7_3:77003651-77003670 Msa1125490:three_prime_UTR 35.0%
ACAAGAGGATTATGCTCATT+TGG - chr7_3:77003666-77003685 Msa1125490:three_prime_UTR 35.0%
CAAGAGGATTATGCTCATTT+GGG - chr7_3:77003667-77003686 Msa1125490:three_prime_UTR 35.0%
! TAAGTGTGGGAGATTTTACT+TGG - chr7_3:77003923-77003942 Msa1125490:intron 35.0%
! AAGTGTGGGAGATTTTACTT+GGG - chr7_3:77003924-77003943 Msa1125490:intron 35.0%
AGTTGGATAGCAAAAATGAG+AGG - chr7_3:77003997-77004016 Msa1125490:intron 35.0%
AAAATGAGAGGTGGAATAGT+TGG - chr7_3:77004009-77004028 Msa1125490:intron 35.0%
GCAGCAATATAAAGGCTTTA+AGG + chr7_3:77004130-77004149 None:intergenic 35.0%
AGTATCACAACTGCAATTTG+TGG + chr7_3:77004152-77004171 None:intergenic 35.0%
TTATATTGTGGCTGCAATTG+GGG - chr7_3:77004194-77004213 Msa1125490:intron 35.0%
TTGCGCATAACTCTAAACTA+CGG + chr7_3:77004227-77004246 None:intergenic 35.0%
! TAGTCTTTTGAGCTATGACA+AGG + chr7_3:77004358-77004377 None:intergenic 35.0%
GTCATAGCTCAAAAGACTAT+TGG - chr7_3:77004359-77004378 Msa1125490:intron 35.0%
! AGTTGGTTATTGGTTATTGC+CGG - chr7_3:77004391-77004410 Msa1125490:intron 35.0%
ATATAATGAAACAAGCTGGC+CGG + chr7_3:77004413-77004432 None:intergenic 35.0%
TCTCTGCTTCATGTTTAACT+AGG - chr7_3:77004477-77004496 Msa1125490:intron 35.0%
ATCTAATCACGTGTCATACT+TGG - chr7_3:77004546-77004565 Msa1125490:intron 35.0%
AAACCTTAGCAACAAAGCTT+GGG + chr7_3:77004600-77004619 None:intergenic 35.0%
!!! TTCCTCCTGGTTTAGTTTTA+TGG - chr7_3:77004789-77004808 Msa1125490:intron 35.0%
ATCCATAAAACTAAACCAGG+AGG + chr7_3:77004794-77004813 None:intergenic 35.0%
AATGCAGCATTCTCATTTCA+CGG + chr7_3:77004950-77004969 None:intergenic 35.0%
!! GCAAGGTATTTTTCAGAACT+TGG - chr7_3:77005002-77005021 Msa1125490:intron 35.0%
! AGAGGAAATGATGGAAACAA+GGG + chr7_3:77005211-77005230 None:intergenic 35.0%
TGTATACTAATGTGCTCTAG+TGG - chr7_3:77005261-77005280 Msa1125490:intron 35.0%
GTGTTCCATTAAGTCAAACT+AGG - chr7_3:77005306-77005325 Msa1125490:intron 35.0%
! AAGACCCTAGTTTGACTTAA+TGG + chr7_3:77005314-77005333 None:intergenic 35.0%
TTAATGGAGCAGATTCATTC+TGG + chr7_3:77005439-77005458 None:intergenic 35.0%
CCTGGAAATAGCATCATTAA+TGG + chr7_3:77005455-77005474 None:intergenic 35.0%
!! CCATTAATGATGCTATTTCC+AGG - chr7_3:77005452-77005471 Msa1125490:intron 35.0%
AAAAAGGAAGGAAGATAACC+TGG + chr7_3:77005473-77005492 None:intergenic 35.0%
!!! GGTTATCTTCCTTCCTTTTT+TGG - chr7_3:77005473-77005492 Msa1125490:intron 35.0%
!!! TATCTTCCTTCCTTTTTTGG+GGG - chr7_3:77005476-77005495 Msa1125490:intron 35.0%
ATAGCTCGTTTGTACTTGAT+AGG - chr7_3:77005686-77005705 Msa1125490:intron 35.0%
TCGTTTGTACTTGATAGGTA+TGG - chr7_3:77005691-77005710 Msa1125490:intron 35.0%
CGTTTGTACTTGATAGGTAT+GGG - chr7_3:77005692-77005711 Msa1125490:intron 35.0%
GTTTGTACTTGATAGGTATG+GGG - chr7_3:77005693-77005712 Msa1125490:intron 35.0%
TTTGTACTTGATAGGTATGG+GGG - chr7_3:77005694-77005713 Msa1125490:intron 35.0%
AGTTACAAGGAAATGGACAT+GGG + chr7_3:77005969-77005988 None:intergenic 35.0%
AAGTTACAAGGAAATGGACA+TGG + chr7_3:77005970-77005989 None:intergenic 35.0%
ACATATGGTAACACTAGCAT+TGG - chr7_3:77006077-77006096 Msa1125490:intron 35.0%
AAAAAACCACCAGTCTTGAA+TGG + chr7_3:77006247-77006266 None:intergenic 35.0%
!!! ATTCAAGACTGGTGGTTTTT+TGG - chr7_3:77006246-77006265 Msa1125490:intron 35.0%
ATAAGTACTTACCCCAGATA+TGG + chr7_3:77006338-77006357 None:intergenic 35.0%
AAGTTGAGTACAGAAGGATT+AGG + chr7_3:77006406-77006425 None:intergenic 35.0%
ACTTAGAAGTTGAGTACAGA+AGG + chr7_3:77006412-77006431 None:intergenic 35.0%
! ACTTCTAAGTTGCTTTGTAC+CGG - chr7_3:77006422-77006441 Msa1125490:intron 35.0%
TTGGTATATGTTTCTTCTGG+TGG - chr7_3:77006817-77006836 Msa1125490:intron 35.0%
TTTCTCGGAGGAAAAATTTG+TGG - chr7_3:77006885-77006904 Msa1125490:intron 35.0%
TTCTCGGAGGAAAAATTTGT+GGG - chr7_3:77006886-77006905 Msa1125490:intron 35.0%
! GTTGACAACACCCAATTTTA+AGG + chr7_3:77006957-77006976 None:intergenic 35.0%
TTGCCACCCAAAAAGTTTAT+TGG - chr7_3:77007175-77007194 Msa1125490:intron 35.0%
!! TAGCCAATAAACTTTTTGGG+TGG + chr7_3:77007181-77007200 None:intergenic 35.0%
CGCATTATATGGAATACCTA+TGG - chr7_3:77007321-77007340 Msa1125490:CDS 35.0%
ATATGGAATACCTATGGACA+TGG - chr7_3:77007327-77007346 Msa1125490:CDS 35.0%
ATAAGGAATACCATGTCCAT+AGG + chr7_3:77007340-77007359 None:intergenic 35.0%
CCATAAGTCATAGTTTCCTA+GGG + chr7_3:77007407-77007426 None:intergenic 35.0%
ACCATAAGTCATAGTTTCCT+AGG + chr7_3:77007408-77007427 None:intergenic 35.0%
! AAGTTGATCTTAATGTTGGC+AGG - chr7_3:77007506-77007525 Msa1125490:intron 35.0%
TGTATGCCGATAATGTTAGA+CGG - chr7_3:77007631-77007650 Msa1125490:intron 35.0%
CATCAACCGTCTAACATTAT+CGG + chr7_3:77007640-77007659 None:intergenic 35.0%
!! GGCTACTGAGGTATTTATTT+TGG - chr7_3:77007659-77007678 Msa1125490:CDS 35.0%
TAGTACTAGTGTGGTATAAC+TGG + chr7_3:77008184-77008203 None:intergenic 35.0%
ATCAAAGTCTAGTACTAGTG+TGG + chr7_3:77008193-77008212 None:intergenic 35.0%
TAGACTTTGATTGCCAGAAT+AGG - chr7_3:77008202-77008221 Msa1125490:CDS 35.0%
ATTCGAGAAACTTGTGCATT+AGG + chr7_3:77008243-77008262 None:intergenic 35.0%
! TTGTTGTTGTTGTACCATTC+AGG + chr7_3:77008515-77008534 None:intergenic 35.0%
!! AATCAAAAAGGTATCACCAG+CGG + chr7_3:77008814-77008833 None:intergenic 35.0%
! CTAATGTATGTTTTGCTTGC+AGG - chr7_3:77008838-77008857 Msa1125490:intron 35.0%
! ACTACATATCAATTGACTCC+GGG + chr7_3:77008983-77009002 None:intergenic 35.0%
! ATGTAGTTACACACGAGTTT+TGG - chr7_3:77008996-77009015 Msa1125490:CDS 35.0%
!!! TGGCTTTTCTAAAATGAGCA+AGG + chr7_3:77009229-77009248 None:intergenic 35.0%
!! TTTTCCCAATGCTAGTTCTT+CGG - chr7_3:77009287-77009306 Msa1125490:CDS 35.0%
TATGGCTGCATTTATCTTTC+TGG - chr7_3:77009568-77009587 Msa1125490:five_prime_UTR 35.0%
TGCTATCGTATAGTAGGAGA+TGG + chr7_3:77003212-77003231 None:intergenic 40.0%
AACAACAATGATGAAGGGGT+TGG - chr7_3:77003279-77003298 Msa1125490:three_prime_UTR 40.0%
TCAAAACCACCCAAACCAAA+CGG - chr7_3:77003325-77003344 Msa1125490:three_prime_UTR 40.0%
AGTGAATCGGATTTGAGAAG+AGG + chr7_3:77003391-77003410 None:intergenic 40.0%
TACATCGTTGCGAACATATG+CGG + chr7_3:77003476-77003495 None:intergenic 40.0%
ATGTTCGCAACGATGTATAC+GGG - chr7_3:77003479-77003498 Msa1125490:three_prime_UTR 40.0%
!! GCTAAGGAGAAGCTTTTTCT+TGG - chr7_3:77003526-77003545 Msa1125490:three_prime_UTR 40.0%
!! GATTCTTGCTGTAACGGTTT+TGG - chr7_3:77003582-77003601 Msa1125490:three_prime_UTR 40.0%
AGGATTATGCTCATTTGGGT+GGG - chr7_3:77003671-77003690 Msa1125490:three_prime_UTR 40.0%
TGGATAGCAAAAATGAGAGG+TGG - chr7_3:77004000-77004019 Msa1125490:intron 40.0%
ACTGGGAACCTTGAATATTG+TGG - chr7_3:77004063-77004082 Msa1125490:intron 40.0%
AGCTATGACAAGGTAGATAG+AGG + chr7_3:77004348-77004367 None:intergenic 40.0%
CAAACCTTAGCAACAAAGCT+TGG + chr7_3:77004601-77004620 None:intergenic 40.0%
TCCATCTATGAAGAGATCAG+TGG - chr7_3:77004716-77004735 Msa1125490:intron 40.0%
! TTTGAGTTCTGTAGTTCTCG+AGG - chr7_3:77004850-77004869 Msa1125490:intron 40.0%
! TTTTGTAACAGCAAGTGCCT+TGG - chr7_3:77005047-77005066 Msa1125490:intron 40.0%
TTGGTTGCATCTATGTTCAG+CGG - chr7_3:77005066-77005085 Msa1125490:intron 40.0%
!! ATCTAAGGCATCGGATTTCA+AGG - chr7_3:77005091-77005110 Msa1125490:intron 40.0%
!! TCTAAGGCATCGGATTTCAA+GGG - chr7_3:77005092-77005111 Msa1125490:intron 40.0%
! CAGAGGAAATGATGGAAACA+AGG + chr7_3:77005212-77005231 None:intergenic 40.0%
!!! ATCTTCCTTCCTTTTTTGGG+GGG - chr7_3:77005477-77005496 Msa1125490:intron 40.0%
ATATGCTAGCGTCCTTATAC+AGG + chr7_3:77005727-77005746 None:intergenic 40.0%
AAGGAAATGGACATGGGAAA+TGG + chr7_3:77005963-77005982 None:intergenic 40.0%
AAGGAGGAAATCTCCATTTG+TGG + chr7_3:77006224-77006243 None:intergenic 40.0%
! TCTAGTTTCCTAGGGTTCTT+AGG - chr7_3:77006688-77006707 Msa1125490:intron 40.0%
TGTAAGTACCTAAGAACCCT+AGG + chr7_3:77006699-77006718 None:intergenic 40.0%
AGGGTTCTTAGGTACTTACA+AGG - chr7_3:77006699-77006718 Msa1125490:intron 40.0%
GTATATGTTTCTTCTGGTGG+AGG - chr7_3:77006820-77006839 Msa1125490:intron 40.0%
!! ATCTGCGATTGCTACTTTCT+CGG - chr7_3:77006870-77006889 Msa1125490:intron 40.0%
TCTCGGAGGAAAAATTTGTG+GGG - chr7_3:77006887-77006906 Msa1125490:intron 40.0%
! AAAATTTGTGGGGTGCTTTG+AGG - chr7_3:77006897-77006916 Msa1125490:intron 40.0%
AACCACAGTGCATGAATATG+TGG + chr7_3:77006923-77006942 None:intergenic 40.0%
GCCGTCACATCAAAACAATA+AGG + chr7_3:77007357-77007376 None:intergenic 40.0%
CCCTAGGAAACTATGACTTA+TGG - chr7_3:77007404-77007423 Msa1125490:intron 40.0%
GACAGAGGAGAAATATCACA+TGG + chr7_3:77007536-77007555 None:intergenic 40.0%
TGCTGTGAGGGATAGTATAT+AGG + chr7_3:77007591-77007610 None:intergenic 40.0%
TATATACTATCCCTCACAGC+AGG - chr7_3:77007590-77007609 Msa1125490:intron 40.0%
CGATAATGTTAGACGGTTGA+TGG - chr7_3:77007638-77007657 Msa1125490:intron 40.0%
CTCTATGAAGAGCTATTGAG+TGG + chr7_3:77007813-77007832 None:intergenic 40.0%
CAAAATCACTCTGATACCAC+TGG - chr7_3:77008294-77008313 Msa1125490:intron 40.0%
!! CGTTTGGAACTGTTCTTTTG+CGG - chr7_3:77008393-77008412 Msa1125490:intron 40.0%
!! GTTTGGAACTGTTCTTTTGC+GGG - chr7_3:77008394-77008413 Msa1125490:intron 40.0%
! GTGCACACACATTACTGTTT+TGG - chr7_3:77008470-77008489 Msa1125490:intron 40.0%
ACATGGAGGATACTACCTTT+AGG + chr7_3:77008698-77008717 None:intergenic 40.0%
TGTTACATCGCTTTGCTACA+AGG + chr7_3:77008752-77008771 None:intergenic 40.0%
TATTACCATTGAGAGCAGCA+TGG + chr7_3:77008910-77008929 None:intergenic 40.0%
ATTGGGAAAACAAACCTGCA+GGG + chr7_3:77009277-77009296 None:intergenic 40.0%
GTATCCGAAGAACTAGCATT+GGG + chr7_3:77009294-77009313 None:intergenic 40.0%
ATGTATCCAATAACTGCCTC+TGG - chr7_3:77009399-77009418 Msa1125490:CDS 40.0%
AAATCCCAATCATACTCCAG+AGG + chr7_3:77009418-77009437 None:intergenic 40.0%
! CATTTATCTTTCTGGTGCTG+AGG - chr7_3:77009576-77009595 Msa1125490:five_prime_UTR 40.0%
! TTCAGTGTTGTTCTTCGTCA+GGG + chr7_3:77009618-77009637 None:intergenic 40.0%
! ATTCAGTGTTGTTCTTCGTC+AGG + chr7_3:77009619-77009638 None:intergenic 40.0%
ATGCGGCGAATTTCTTCTCT+AGG + chr7_3:77003459-77003478 None:intergenic 45.0%
AACGATGTATACGGGACGAT+GGG - chr7_3:77003487-77003506 Msa1125490:three_prime_UTR 45.0%
AAGAGGAGAGTTAGGAGCTA+AGG - chr7_3:77003510-77003529 Msa1125490:three_prime_UTR 45.0%
!! TCTTGCTGTAACGGTTTTGG+TGG - chr7_3:77003585-77003604 Msa1125490:three_prime_UTR 45.0%
GAGGATTATGCTCATTTGGG+TGG - chr7_3:77003670-77003689 Msa1125490:three_prime_UTR 45.0%
ATTATGCTCATTTGGGTGGG+TGG - chr7_3:77003674-77003693 Msa1125490:three_prime_UTR 45.0%
TGGCGAAATTAGGGCCAATA+TGG - chr7_3:77004083-77004102 Msa1125490:intron 45.0%
CAACAGCATCACAGCCATAT+TGG + chr7_3:77004100-77004119 None:intergenic 45.0%
ATATGGCTGTGATGCTGTTG+TGG - chr7_3:77004100-77004119 Msa1125490:intron 45.0%
!! GTTCCCAAGCTTTGTTGCTA+AGG - chr7_3:77004594-77004613 Msa1125490:intron 45.0%
GCCACTGATCTCTTCATAGA+TGG + chr7_3:77004720-77004739 None:intergenic 45.0%
! TTCCTCTTGTTGGTCTCATC+AGG - chr7_3:77004745-77004764 Msa1125490:intron 45.0%
GCTGAACATAGATGCAACCA+AGG + chr7_3:77005067-77005086 None:intergenic 45.0%
TGGTTGCATCTATGTTCAGC+GGG - chr7_3:77005067-77005086 Msa1125490:intron 45.0%
CTATGTTCAGCGGGAATCTA+AGG - chr7_3:77005076-77005095 Msa1125490:intron 45.0%
!! TCGGATTTCAAGGGTGTTTC+AGG - chr7_3:77005101-77005120 Msa1125490:CDS 45.0%
TGCGCACTCTGTAACAATCA+TGG - chr7_3:77005142-77005161 Msa1125490:CDS 45.0%
ACATAGGGCAGAGGAAATGA+TGG + chr7_3:77005220-77005239 None:intergenic 45.0%
TCATTTCCTCTGCCCTATGT+TGG - chr7_3:77005220-77005239 Msa1125490:CDS 45.0%
AAAAGACCAACATAGGGCAG+AGG + chr7_3:77005229-77005248 None:intergenic 45.0%
AGGAAGAAAGTTCACGGGTT+AGG + chr7_3:77005381-77005400 None:intergenic 45.0%
AGCTGCAGGAAGAAAGTTCA+CGG + chr7_3:77005387-77005406 None:intergenic 45.0%
TTGGGCTCGAGTTCTCAAAT+TGG - chr7_3:77005558-77005577 Msa1125490:intron 45.0%
TTGGCAAGCAGATGAACACA+AGG + chr7_3:77005868-77005887 None:intergenic 45.0%
TGGACATGGGAAATGGACAT+AGG + chr7_3:77005956-77005975 None:intergenic 45.0%
! GCAGAAGGTACAACCACAAA+TGG - chr7_3:77006208-77006227 Msa1125490:intron 45.0%
TTCCTCCTTCCATTCAAGAC+TGG - chr7_3:77006235-77006254 Msa1125490:intron 45.0%
AACCACCAGTCTTGAATGGA+AGG + chr7_3:77006243-77006262 None:intergenic 45.0%
!!! GACTGGTGGTTTTTTGGCAA+AGG - chr7_3:77006252-77006271 Msa1125490:intron 45.0%
TCATCCATTTCCTGCTGTGA+GGG + chr7_3:77007603-77007622 None:intergenic 45.0%
ATCATCCATTTCCTGCTGTG+AGG + chr7_3:77007604-77007623 None:intergenic 45.0%
GAGCTATTGAGTGGTGTATC+TGG + chr7_3:77007804-77007823 None:intergenic 45.0%
!! AATTTAGCCTTGCTTCTGCG+TGG - chr7_3:77008150-77008169 Msa1125490:intron 45.0%
!! ATTTAGCCTTGCTTCTGCGT+GGG - chr7_3:77008151-77008170 Msa1125490:intron 45.0%
TGATACCACTGGAAAGTCTG+TGG - chr7_3:77008305-77008324 Msa1125490:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr7_3:77008536-77008555 Msa1125490:intron 45.0%
CTTATCCCACTAAGTGGGAT+CGG - chr7_3:77008541-77008560 Msa1125490:intron 45.0%
TACTGTTATAGTGTGACCGC+TGG - chr7_3:77008795-77008814 Msa1125490:intron 45.0%
ATCTACCATGCTGCTCTCAA+TGG - chr7_3:77008902-77008921 Msa1125490:intron 45.0%
TCTTTCGGACGCAAAACACT+AGG + chr7_3:77008941-77008960 None:intergenic 45.0%
CATTGGGAAAACAAACCTGC+AGG + chr7_3:77009278-77009297 None:intergenic 45.0%
CGTATCCGAAGAACTAGCAT+TGG + chr7_3:77009295-77009314 None:intergenic 45.0%
! ATGCTAGTTCTTCGGATACG+TGG - chr7_3:77009295-77009314 Msa1125490:CDS 45.0%
CATACTCCAGAGGCAGTTAT+TGG + chr7_3:77009408-77009427 None:intergenic 45.0%
!! AACTGCCTCTGGAGTATGAT+TGG - chr7_3:77009410-77009429 Msa1125490:CDS 45.0%
!! ACTGCCTCTGGAGTATGATT+GGG - chr7_3:77009411-77009430 Msa1125490:CDS 45.0%
! TCAGTGTTGTTCTTCGTCAG+GGG + chr7_3:77009617-77009636 None:intergenic 45.0%
!! TTTAATAAATAAGATAAAAT+AGG + chr7_3:77005833-77005852 None:intergenic 5.0%
! GTGGTGGTTCCGTTTGGTTT+GGG + chr7_3:77003337-77003356 None:intergenic 50.0%
AAGAGGACGATCGTCACGAA+CGG + chr7_3:77003374-77003393 None:intergenic 50.0%
!! GGTGGTGGAAGAGAGTGAAT+CGG + chr7_3:77003404-77003423 None:intergenic 50.0%
CAACGATGTATACGGGACGA+TGG - chr7_3:77003486-77003505 Msa1125490:three_prime_UTR 50.0%
ACGATGGGAAGAGGAGAGTT+AGG - chr7_3:77003502-77003521 Msa1125490:three_prime_UTR 50.0%
AGCAACAAAGCTTGGGAACG+AGG + chr7_3:77004593-77004612 None:intergenic 50.0%
GTGGCTAAGCTTCCTCTTGT+TGG - chr7_3:77004735-77004754 Msa1125490:intron 50.0%
CACCTGATGAGACCAACAAG+AGG + chr7_3:77004750-77004769 None:intergenic 50.0%
! TCAGCGGGAATCTAAGGCAT+CGG - chr7_3:77005082-77005101 Msa1125490:intron 50.0%
GCTGCAGGAAGAAAGTTCAC+GGG + chr7_3:77005386-77005405 None:intergenic 50.0%
CTTTCAGTGACAACAGCTGC+AGG + chr7_3:77005401-77005420 None:intergenic 50.0%
!!! TTCCTTCCTTTTTTGGGGGG+TGG - chr7_3:77005480-77005499 Msa1125490:intron 50.0%
!!! TCCTTCCTTTTTTGGGGGGT+GGG - chr7_3:77005481-77005500 Msa1125490:intron 50.0%
GGGGGTCTCTTACCTGTATA+AGG - chr7_3:77005712-77005731 Msa1125490:intron 50.0%
CACCAGTCTTGAATGGAAGG+AGG + chr7_3:77006240-77006259 None:intergenic 50.0%
CTCCTTCCATTCAAGACTGG+TGG - chr7_3:77006238-77006257 Msa1125490:intron 50.0%
CGGGGCTAAATCTCTGGTAA+GGG + chr7_3:77006306-77006325 None:intergenic 50.0%
CAGATATGGAATCCCAAGCG+GGG + chr7_3:77006324-77006343 None:intergenic 50.0%
CCAGATATGGAATCCCAAGC+GGG + chr7_3:77006325-77006344 None:intergenic 50.0%
CCCAGATATGGAATCCCAAG+CGG + chr7_3:77006326-77006345 None:intergenic 50.0%
CCGCTTGGGATTCCATATCT+GGG - chr7_3:77006323-77006342 Msa1125490:intron 50.0%
CGCTTGGGATTCCATATCTG+GGG - chr7_3:77006324-77006343 Msa1125490:intron 50.0%
CTGGTGGAGGATCAATGTCA+TGG - chr7_3:77006833-77006852 Msa1125490:intron 50.0%
!! TGCGATTGCTACTTTCTCGG+AGG - chr7_3:77006873-77006892 Msa1125490:intron 50.0%
GGCCACATATTCATGCACTG+TGG - chr7_3:77006918-77006937 Msa1125490:intron 50.0%
CAACGCTTTGGTTGCAGGAT+TGG + chr7_3:77007158-77007177 None:intergenic 50.0%
!!! CTTTTTGGGTGGCAACGCTT+TGG + chr7_3:77007170-77007189 None:intergenic 50.0%
CTATCCCTCACAGCAGGAAA+TGG - chr7_3:77007596-77007615 Msa1125490:intron 50.0%
!! TAGACGGTTGATGGCTACTG+AGG - chr7_3:77007647-77007666 Msa1125490:CDS 50.0%
!! TTTAGCCTTGCTTCTGCGTG+GGG - chr7_3:77008152-77008171 Msa1125490:intron 50.0%
GTCATCCACAGACTTTCCAG+TGG + chr7_3:77008313-77008332 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_3:77008538-77008557 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_3:77008535-77008554 Msa1125490:intron 50.0%
CGATCCCACTTAGTGGGATA+AGG + chr7_3:77008543-77008562 None:intergenic 50.0%
GTTTGCCGATCCCACTTAGT+GGG + chr7_3:77008549-77008568 None:intergenic 50.0%
TGTTTGCCGATCCCACTTAG+TGG + chr7_3:77008550-77008569 None:intergenic 50.0%
GGATCGGCAAACATCCTGAA+TGG - chr7_3:77008557-77008576 Msa1125490:intron 50.0%
ATGAATGGACAGCTCACGTG+AGG - chr7_3:77009054-77009073 Msa1125490:CDS 50.0%
TGAATGGACAGCTCACGTGA+GGG - chr7_3:77009055-77009074 Msa1125490:CDS 50.0%
CTTCTGTTTCATGTCCCTGC+AGG - chr7_3:77009260-77009279 Msa1125490:CDS 50.0%
TTGTTCTTCGTCAGGGGCTT+CGG + chr7_3:77009611-77009630 None:intergenic 50.0%
!! GTGGTTCCGTTTGGTTTGGG+TGG + chr7_3:77003334-77003353 None:intergenic 55.0%
! GGTGGTGGTTCCGTTTGGTT+TGG + chr7_3:77003338-77003357 None:intergenic 55.0%
GTATACGGGACGATGGGAAG+AGG - chr7_3:77003493-77003512 Msa1125490:three_prime_UTR 55.0%
ATGCTCATTTGGGTGGGTGG+AGG - chr7_3:77003677-77003696 Msa1125490:three_prime_UTR 55.0%
! TGCGTTTGTTGACGCAGTCG+CGG - chr7_3:77004036-77004055 Msa1125490:intron 55.0%
TGACGCAGTCGCGGTTATAC+TGG - chr7_3:77004045-77004064 Msa1125490:intron 55.0%
GACGCAGTCGCGGTTATACT+GGG - chr7_3:77004046-77004065 Msa1125490:intron 55.0%
TTGTGGCTGCAATTGGGGCT+TGG - chr7_3:77004199-77004218 Msa1125490:intron 55.0%
CAAACCTCAGCCCGAAGAGA+CGG - chr7_3:77004504-77004523 Msa1125490:intron 55.0%
AAACCTCAGCCCGAAGAGAC+GGG - chr7_3:77004505-77004524 Msa1125490:intron 55.0%
ACCAGGTCTTCCCGTCTCTT+CGG + chr7_3:77004518-77004537 None:intergenic 55.0%
ACCCACCCCCCAAAAAAGGA+AGG + chr7_3:77005485-77005504 None:intergenic 55.0%
!!! CTTTTTTGGGGGGTGGGTGT+GGG - chr7_3:77005487-77005506 Msa1125490:intron 55.0%
!!! TTTTTTGGGGGGTGGGTGTG+GGG - chr7_3:77005488-77005507 Msa1125490:intron 55.0%
GCGGGGCTAAATCTCTGGTA+AGG + chr7_3:77006307-77006326 None:intergenic 55.0%
ACCAGAGATTTAGCCCCGCT+TGG - chr7_3:77006308-77006327 Msa1125490:intron 55.0%
CCAGAGATTTAGCCCCGCTT+GGG - chr7_3:77006309-77006328 Msa1125490:intron 55.0%
CCCGCTTGGGATTCCATATC+TGG - chr7_3:77006322-77006341 Msa1125490:intron 55.0%
TCGGACGCAAAACACTAGGC+AGG + chr7_3:77008937-77008956 None:intergenic 55.0%
GAATGGACAGCTCACGTGAG+GGG - chr7_3:77009056-77009075 Msa1125490:CDS 55.0%
TGTTCTTCGTCAGGGGCTTC+GGG + chr7_3:77009610-77009629 None:intergenic 55.0%
ACGATCGTCACGAACGGTGG+CGG + chr7_3:77003368-77003387 None:intergenic 60.0%
AGGACGATCGTCACGAACGG+TGG + chr7_3:77003371-77003390 None:intergenic 60.0%
!! GGTGGTGATGGTTGTGGTGG+TGG + chr7_3:77003419-77003438 None:intergenic 60.0%
CACCACAACCATCACCACCG+CGG - chr7_3:77003420-77003439 Msa1125490:three_prime_UTR 60.0%
! TAGGTCTTGTAGCTCCGCCG+CGG + chr7_3:77003440-77003459 None:intergenic 60.0%
CCAGGTCTTCCCGTCTCTTC+GGG + chr7_3:77004517-77004536 None:intergenic 60.0%
CCACACCCACCCCCCAAAAA+AGG + chr7_3:77005489-77005508 None:intergenic 60.0%
!!! CCTTTTTTGGGGGGTGGGTG+TGG - chr7_3:77005486-77005505 Msa1125490:intron 60.0%
CCCAAGCGGGGCTAAATCTC+TGG + chr7_3:77006312-77006331 None:intergenic 60.0%
GGTGGCAACGCTTTGGTTGC+AGG + chr7_3:77007163-77007182 None:intergenic 60.0%
ACAAGCCCCACGCAGAAGCA+AGG + chr7_3:77008160-77008179 None:intergenic 60.0%
!! GCGGTGGTGGTGGTTCCGTT+TGG + chr7_3:77003343-77003362 None:intergenic 65.0%
! ATCGTCACGAACGGTGGCGG+TGG + chr7_3:77003365-77003384 None:intergenic 65.0%
!! CGCGGTGGTGATGGTTGTGG+TGG + chr7_3:77003422-77003441 None:intergenic 65.0%
CACAACCATCACCACCGCGG+CGG - chr7_3:77003423-77003442 Msa1125490:three_prime_UTR 65.0%
CTTCCCGTCTCTTCGGGCTG+AGG + chr7_3:77004511-77004530 None:intergenic 65.0%
CCCGAAGAGACGGGAAGACC+TGG - chr7_3:77004514-77004533 Msa1125490:intron 65.0%
TGGGTGTGGGGTGGAGTGGA+GGG - chr7_3:77005500-77005519 Msa1125490:intron 65.0%
TCGTCAGGGGCTTCGGGACA+GGG + chr7_3:77009604-77009623 None:intergenic 65.0%
TTCGTCAGGGGCTTCGGGAC+AGG + chr7_3:77009605-77009624 None:intergenic 65.0%
! GTCACGAACGGTGGCGGTGG+CGG + chr7_3:77003362-77003381 None:intergenic 70.0%
!! CGCCGCGGTGGTGATGGTTG+TGG + chr7_3:77003425-77003444 None:intergenic 70.0%
TAGCTCCGCCGCGGTGGTGA+TGG + chr7_3:77003431-77003450 None:intergenic 70.0%
GTCTTGTAGCTCCGCCGCGG+TGG + chr7_3:77003437-77003456 None:intergenic 70.0%
TTTGGGGGGTGGGTGTGGGG+TGG - chr7_3:77005491-77005510 Msa1125490:intron 70.0%
GTGGGTGTGGGGTGGAGTGG+AGG - chr7_3:77005499-77005518 Msa1125490:intron 70.0%
GGGTGTGGGGTGGAGTGGAG+GGG - chr7_3:77005501-77005520 Msa1125490:intron 70.0%
TGGGGTGGAGTGGAGGGGTG+TGG - chr7_3:77005506-77005525 Msa1125490:intron 70.0%
! AACGGTGGCGGTGGCGGTGG+TGG + chr7_3:77003356-77003375 None:intergenic 75.0%
! ACGAACGGTGGCGGTGGCGG+TGG + chr7_3:77003359-77003378 None:intergenic 75.0%
GGGGTGGGTGTGGGGTGGAG+TGG - chr7_3:77005496-77005515 Msa1125490:intron 75.0%
!! GGTGGCGGTGGCGGTGGTGG+TGG + chr7_3:77003353-77003372 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 77003105 77009663 77003105 ID=Msa1125490;Name=Msa1125490
chr7_3 mRNA 77003105 77009663 77003105 ID=Msa1125490-mRNA-1;Parent=Msa1125490;Name=Msa1125490-mRNA-1;_AED=0.08;_eAED=0.08;_QI=181|0.75|0.88|0.88|1|1|9|696|419
chr7_3 exon 77003105 77003908 77003105 ID=Msa1125490-mRNA-1:exon:21166;Parent=Msa1125490-mRNA-1
chr7_3 exon 77004421 77004495 77004421 ID=Msa1125490-mRNA-1:exon:21165;Parent=Msa1125490-mRNA-1
chr7_3 exon 77005100 77005240 77005100 ID=Msa1125490-mRNA-1:exon:21164;Parent=Msa1125490-mRNA-1
chr7_3 exon 77006423 77006556 77006423 ID=Msa1125490-mRNA-1:exon:21163;Parent=Msa1125490-mRNA-1
chr7_3 exon 77007295 77007363 77007295 ID=Msa1125490-mRNA-1:exon:21162;Parent=Msa1125490-mRNA-1
chr7_3 exon 77007646 77007710 77007646 ID=Msa1125490-mRNA-1:exon:21161;Parent=Msa1125490-mRNA-1
chr7_3 exon 77008002 77008039 77008002 ID=Msa1125490-mRNA-1:exon:21160;Parent=Msa1125490-mRNA-1
chr7_3 exon 77008153 77008269 77008153 ID=Msa1125490-mRNA-1:exon:21159;Parent=Msa1125490-mRNA-1
chr7_3 exon 77008970 77009663 77008970 ID=Msa1125490-mRNA-1:exon:21158;Parent=Msa1125490-mRNA-1
chr7_3 five_prime_UTR 77009483 77009663 77009483 ID=Msa1125490-mRNA-1:five_prime_utr;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77008970 77009482 77008970 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77008153 77008269 77008153 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77008002 77008039 77008002 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77007646 77007710 77007646 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77007295 77007363 77007295 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77006423 77006556 77006423 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77005100 77005240 77005100 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77004421 77004495 77004421 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 CDS 77003801 77003908 77003801 ID=Msa1125490-mRNA-1:cds;Parent=Msa1125490-mRNA-1
chr7_3 three_prime_UTR 77003105 77003800 77003105 ID=Msa1125490-mRNA-1:three_prime_utr;Parent=Msa1125490-mRNA-1
Gene Sequence

>Msa1125490

ATGATGAAGGGGTTGGAGTCAGAACTCAAAGACCTAAATTCAAAACCACCCAAACCAAACGGAACCACCACCACCGCCACCGCCACCGTTCGTGACGATCGTCCTCTTCTCAAATCCGATTCACTCTCTTCCACCACCACAACCATCACCACCGCGGCGGAGCTACAAGACCTAGAGAAGAAATTCGCCGCATATGTTCGCAACGATGTATACGGGACGATGGGAAGAGGAGAGTTAGGAGCTAAGGAGAAGCTTTTTCTTGGTTTCGCGCTTGTGACTCTTCTTCCGATTAGAGTGATTCTTGCTGTAACGGTTTTGGTGGTTTATTATGTGGTTTGTAGGGTTTGTACACTGTTTAAAATCCCTAATCGTGAAGATGAACAAGAGGATTATGCTCATTTGGGTGGGTGGAGGAGAAGTGTTATTGTTAAGTGTGGGAAAGCTCTTTCTAGAGCTATGCTTTTCATTTTTGGATTTTATTGGATTCATGTTTCTTCTAACTCTTTCAATCAGGAAAACAAACCTCAGCCCGAAGAGACGGGAAGACCTGGTGTAATAATATCTAATCACGTGTCATACTTGGATATTTTGTATCACATGTCTTCCTCGTTCCCAAGCTTTGTTGCTAAGAGATCAGTGGCTAAGCTTCCTCTTGTTGGTCTCATCAGCAAGTGCCTTGGTTGCATCTATGTTCAGCGGGAATCTAAGGCATCGGATTTCAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTCGAGAAGCACACCAGAATGAATCTGCTCCATTAATGATGCTATTTCCAGAAGGTACAACCACAAATGGAGATTTCCTCCTTCCATTCAAGACTGGTGGTTTTTTGGCAAAGGCACCAGTACTTCCTGTAATTTTAAAATACCCTTACCAGAGATTTAGCCCCGCTTGGGATTCCATATCTGGGGTGCGCCATGTGATATTTCTCCTCTGTCAGTTTGTAAATTATATAGAAGTGATACAATTACCTATATACTATCCCTCACAGCAGGAAATGGATGATCCCAAATTGTATGCCGATAATGTTAGACGGTTGATGGCTACTGAGTGGAAATTGACTGCTGTGAATCAAAATCACTCTGATACCACTGGAAAGTCTGTGGATGACTTTCTCATAAAAACTGGTAATTTGATACTTTCTGATATCGGGCTAGCTGAAAAACGAATCTACCATGCTGCTCTCAATGGTAATAATAGCCTGCCTAGTGTTTTGCGTCCGAAAGACGATTGA
Protein sequence

>Msa1125490

MMKGLESELKDLNSKPPKPNGTTTTATATVRDDRPLLKSDSLSSTTTTITTAAELQDLEKKFAAYVRNDVYGTMGRGELGAKEKLFLGFALVTLLPIRVILAVTVLVVYYVVCRVCTLFKIPNREDEQEDYAHLGGWRRSVIVKCGKALSRAMLFIFGFYWIHVSSNSFNQENKPQPEETGRPGVIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCIYVQRESKASDFKGVSAVVTERIREAHQNESAPLMMLFPEGTTTNGDFLLPFKTGGFLAKAPVLPVILKYPYQRFSPAWDSISGVRHVIFLLCQFVNYIEVIQLPIYYPSQQEMDDPKLYADNVRRLMATEWKLTAVNQNHSDTTGKSVDDFLIKTGNLILSDIGLAEKRIYHAALNGNNSLPSVLRPKDD*