AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165860 MtrunA17_Chr7g0271211 97.196 214 6 0 1 214 1 214 2.12e-150 416
Msa1165860 MtrunA17_Chr1g0193421 78.392 199 43 0 16 214 20 218 9.60e-113 321
Msa1165860 MtrunA17_Chr1g0193671 65.700 207 71 0 8 214 11 217 1.27e-94 275
Msa1165860 MtrunA17_Chr4g0007041 46.047 215 109 3 1 210 3 215 4.78e-56 177
Msa1165860 MtrunA17_Chr6g0449731 48.113 212 104 3 4 211 6 215 5.46e-56 177
Msa1165860 MtrunA17_Chr6g0449761 48.113 212 104 3 4 211 6 215 5.51e-56 178
Msa1165860 MtrunA17_Chr6g0449751 48.792 207 100 3 9 211 11 215 7.90e-56 177
Msa1165860 MtrunA17_Chr1g0189841 45.833 216 111 3 1 211 3 217 9.99e-56 176
Msa1165860 MtrunA17_Chr4g0007051 45.581 215 110 3 1 210 3 215 2.07e-55 176
Msa1165860 MtrunA17_Chr4g0007031 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1165860 MtrunA17_Chr5g0419971 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1165860 MtrunA17_Chr5g0419981 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1165860 MtrunA17_Chr6g0449771 47.642 212 105 3 4 211 6 215 3.21e-55 175
Msa1165860 MtrunA17_Chr2g0285871 45.581 215 110 3 1 210 3 215 4.53e-55 175
Msa1165860 MtrunA17_Chr5g0414971 45.641 195 105 1 19 212 26 220 1.13e-54 174
Msa1165860 MtrunA17_Chr1g0210761 43.810 210 105 5 9 213 8 209 6.32e-53 169
Msa1165860 MtrunA17_Chr6g0449791 50.829 181 82 3 24 199 26 204 7.25e-50 161
Msa1165860 MtrunA17_Chr1g0156131 42.453 212 114 2 2 211 4 209 4.96e-49 159
Msa1165860 MtrunA17_Chr6g0449781 43.961 207 109 4 9 211 11 214 5.13e-47 154
Msa1165860 MtrunA17_Chr2g0292831 44.103 195 104 2 19 211 21 212 2.70e-46 152
Msa1165860 MtrunA17_Chr2g0292901 43.158 190 103 2 24 211 27 213 5.23e-44 146
Msa1165860 MtrunA17_Chr1g0178711 38.073 218 125 4 4 214 10 224 1.05e-43 146
Msa1165860 MtrunA17_Chr2g0292861 43.605 172 94 2 43 211 7 178 2.63e-40 135
Msa1165860 MtrunA17_Chr3g0130241 40.513 195 97 4 19 211 88 265 3.65e-40 139
Msa1165860 MtrunA17_Chr2g0292841 43.605 172 94 2 43 211 7 178 1.38e-39 134
Msa1165860 MtrunA17_Chr8g0343934 37.559 213 128 4 2 214 1 208 2.27e-39 134
Msa1165860 MtrunA17_Chr8g0335851 45.562 169 89 2 19 185 25 192 4.37e-39 134
Msa1165860 MtrunA17_Chr8g0343954 38.542 192 114 3 23 214 21 208 1.32e-38 132
Msa1165860 MtrunA17_Chr2g0313961 37.745 204 123 3 8 211 6 205 1.86e-38 132
Msa1165860 MtrunA17_Chr8g0343961 37.089 213 129 4 2 214 1 208 2.48e-38 131
Msa1165860 MtrunA17_Chr8g0343911 37.438 203 125 1 9 211 4 204 3.10e-38 131
Msa1165860 MtrunA17_Chr2g0302171 37.441 211 127 4 2 212 1 206 2.19e-37 129
Msa1165860 MtrunA17_Chr2g0300581 40.107 187 110 1 26 212 23 207 3.98e-37 128
Msa1165860 MtrunA17_Chr2g0301611 36.967 211 128 4 2 212 1 206 6.43e-37 128
Msa1165860 MtrunA17_Chr2g0297231 36.493 211 129 4 2 212 1 206 7.12e-37 127
Msa1165860 MtrunA17_Chr2g0300591 39.153 189 113 1 26 214 23 209 1.68e-36 127
Msa1165860 MtrunA17_Chr2g0300561 40.323 186 109 1 26 211 23 206 5.44e-36 125
Msa1165860 MtrunA17_Chr3g0084531 35.545 211 131 4 2 212 1 206 1.45e-35 124
Msa1165860 MtrunA17_Chr2g0297241 36.019 211 130 4 2 212 1 206 2.17e-35 124
Msa1165860 MtrunA17_Chr2g0302541 38.421 190 113 3 23 212 21 206 2.46e-35 124
Msa1165860 MtrunA17_Chr2g0292911 52.941 119 54 1 43 159 7 125 1.55e-34 120
Msa1165860 MtrunA17_Chr3g0084511 34.597 211 132 4 2 212 1 205 2.58e-34 121
Msa1165860 MtrunA17_Chr4g0003361 40.196 204 114 5 8 211 6 201 3.36e-34 121
Msa1165860 MtrunA17_Chr4g0012651 38.624 189 112 3 24 212 22 206 4.20e-34 120
Msa1165860 MtrunA17_Chr7g0217811 38.095 189 113 3 24 212 22 206 4.24e-34 120
Msa1165860 MtrunA17_Chr5g0411961 32.701 211 137 4 2 212 1 206 1.68e-33 119
Msa1165860 MtrunA17_Chr3g0084521 35.545 211 130 5 2 212 1 205 3.32e-33 118
Msa1165860 MtrunA17_Chr8g0344051 39.560 182 105 4 2 182 1 178 2.79e-32 116
Msa1165860 MtrunA17_Chr2g0321581 44.776 134 71 2 76 208 70 201 9.22e-32 114
Msa1165860 MtrunA17_Chr2g0321591 44.776 134 71 2 76 208 70 201 1.13e-31 114
Msa1165860 MtrunA17_Chr8g0344021 41.176 170 98 2 2 170 1 169 2.69e-31 114
Msa1165860 MtrunA17_Chr2g0321601 36.842 209 115 6 1 208 8 200 3.28e-31 113
Msa1165860 MtrunA17_Chr8g0343921 36.932 176 108 2 8 183 5 177 3.38e-31 113
Msa1165860 MtrunA17_Chr4g0026201 41.045 134 76 2 76 208 71 202 2.66e-30 110
Msa1165860 MtrunA17_Chr4g0026191 41.045 134 76 2 76 208 71 202 2.72e-30 110
Msa1165860 MtrunA17_Chr8g0344041 39.645 169 97 4 2 169 5 169 7.75e-29 107
Msa1165860 MtrunA17_Chr8g0344031 38.235 170 103 2 1 170 1 168 5.40e-26 100
Msa1165860 MtrunA17_Chr3g0115141 34.574 188 115 5 25 211 26 206 2.49e-24 95.5
Msa1165860 MtrunA17_Chr3g0084551 32.075 212 123 7 2 208 1 196 1.44e-22 91.7
Msa1165860 MtrunA17_Chr2g0286171 30.047 213 140 6 1 211 3 208 3.70e-22 90.1
Msa1165860 MtrunA17_Chr3g0084501 42.991 107 59 2 2 108 1 105 3.50e-20 82.0
Msa1165860 MtrunA17_Chr2g0292881 56.140 57 23 1 91 145 1 57 1.74e-13 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165860 AT1G09560.1 71.357 199 57 0 16 214 20 218 3.97e-98 284
Msa1165860 AT3G62020.1 67.633 207 65 2 10 214 12 218 7.61e-96 278
Msa1165860 AT1G02335.1 61.836 207 78 1 9 214 12 218 2.99e-89 262
Msa1165860 AT3G62020.2 67.956 181 57 1 35 214 9 189 5.79e-86 253
Msa1165860 AT5G26700.1 57.143 196 81 1 19 214 20 212 1.57e-76 229
Msa1165860 AT3G05930.1 53.140 207 96 1 9 214 12 218 1.96e-73 222
Msa1165860 AT1G18970.1 49.756 205 101 1 8 212 17 219 1.92e-63 196
Msa1165860 AT1G18980.1 50.254 197 96 1 16 212 25 219 3.39e-61 191
Msa1165860 AT5G39110.1 46.818 220 107 3 2 211 1 220 2.24e-60 189
Msa1165860 AT5G39150.1 47.489 219 106 3 2 211 1 219 2.32e-60 189
Msa1165860 AT3G05950.1 50.698 215 100 3 4 212 8 222 4.84e-60 188
Msa1165860 AT5G39120.1 47.032 219 107 3 2 211 1 219 1.29e-59 187
Msa1165860 AT5G39180.1 47.032 219 107 3 2 211 1 219 1.51e-59 186
Msa1165860 AT5G39160.1 46.411 209 108 2 8 212 12 220 4.37e-59 185
Msa1165860 AT5G39190.1 46.411 209 108 2 8 212 12 220 7.37e-59 185
Msa1165860 AT5G39130.1 46.411 209 108 2 8 212 12 220 1.37e-58 184
Msa1165860 AT4G14630.1 48.387 217 105 3 2 211 6 222 1.61e-58 184
Msa1165860 AT3G04200.1 47.768 224 106 4 1 213 1 224 6.35e-58 182
Msa1165860 AT5G39160.3 45.714 210 104 3 8 212 12 216 9.01e-56 177
Msa1165860 AT5G38960.1 47.805 205 102 3 13 212 19 223 2.24e-55 176
Msa1165860 AT5G38910.1 46.154 208 108 2 8 211 12 219 2.79e-55 176
Msa1165860 AT5G38940.1 47.208 197 100 2 19 211 25 221 3.89e-52 167
Msa1165860 AT5G38940.2 47.208 197 100 2 19 211 49 245 4.98e-52 168
Msa1165860 AT5G38930.1 46.500 200 103 2 16 211 22 221 6.14e-52 167
Msa1165860 AT5G39160.2 42.381 210 93 3 8 212 12 198 1.16e-49 160
Msa1165860 AT5G39190.2 42.381 210 93 3 8 212 12 198 1.41e-49 160
Msa1165860 AT3G04170.1 43.318 217 114 4 4 214 8 221 2.93e-49 160
Msa1165860 AT3G04150.1 42.791 215 114 4 4 209 8 222 1.43e-48 159
Msa1165860 AT3G04150.2 40.351 228 114 4 4 209 8 235 7.92e-48 157
Msa1165860 AT3G04190.1 43.814 194 105 2 20 209 26 219 1.64e-47 156
Msa1165860 AT3G04180.1 42.784 194 107 2 20 209 26 219 4.30e-47 155
Msa1165860 AT1G10460.1 41.000 200 113 3 17 211 16 215 4.44e-46 152
Msa1165860 AT5G61750.1 41.011 178 103 1 2 177 1 178 3.14e-43 144
Msa1165860 AT3G10080.1 37.931 203 118 4 16 213 22 221 2.99e-41 140
Msa1165860 AT3G10080.2 37.931 203 118 4 16 213 93 292 1.65e-40 140
Msa1165860 AT1G74820.1 39.894 188 111 1 24 211 40 225 1.72e-40 138
Msa1165860 AT5G20630.1 37.441 211 129 2 2 212 1 208 1.76e-38 132
Msa1165860 AT5G38910.2 37.864 206 91 2 8 211 12 182 4.56e-36 125
Msa1165860 AT1G72610.1 37.895 190 116 1 23 212 18 205 1.11e-35 125
Msa1165860 AT5G38950.1 42.857 63 36 0 140 202 2 64 4.58e-11 58.2

Find 83 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCGTGCTTGTTATTT+TGG 0.110979 7_4:-57885154 Msa1165860:three_prime_UTR
GAACTTCCTTGGTACCAATT+TGG 0.208001 7_4:+57885365 None:intergenic
CCTCGCAGGGTTGTTGCTTC+TGG 0.229387 7_4:-57886562 Msa1165860:CDS
GTACATAACCACTGTTCTTT+TGG 0.233211 7_4:+57885500 None:intergenic
CTTAGATCTTGTTTGAATAA+AGG 0.255982 7_4:-57885080 None:intergenic
TTGTCTTGCCTACATATAAT+TGG 0.267421 7_4:-57886641 Msa1165860:five_prime_UTR
CAAAATAACAAGCACGCATT+AGG 0.285694 7_4:+57885155 None:intergenic
TGGAAATGAACCAATCCTTT+AGG 0.302524 7_4:+57885520 None:intergenic
TTGACTCAAGCATTCCAAAT+TGG 0.317621 7_4:-57885379 Msa1165860:CDS
TTTGGAACTCATAAAACAAT+TGG 0.322743 7_4:-57885227 Msa1165860:three_prime_UTR
GCAAGAATTAATATAGTATA+AGG 0.331801 7_4:+57886787 None:intergenic
GCTTGAGTCAAAATATTATC+TGG 0.334327 7_4:+57885391 None:intergenic
GTTGATTTACATTTCATGTT+TGG 0.338674 7_4:-57885245 Msa1165860:three_prime_UTR
GATATCAAAGACTATTGTTA+AGG 0.351789 7_4:-57885560 Msa1165860:CDS
TGTGTTGCAGACCTTGCTTC+TGG 0.354120 7_4:-57886492 Msa1165860:intron
CTCTCTTCCAAGTCTTCTCT+TGG 0.370804 7_4:-57886742 Msa1165860:five_prime_UTR
CAATCCTTGATCTCACTACT+TGG 0.371152 7_4:+57885318 None:intergenic
TTGGAACTCATAAAACAATT+GGG 0.383345 7_4:-57885226 Msa1165860:three_prime_UTR
GTTGTTTGTGGCTCCTGGTT+TGG 0.387912 7_4:+57885777 None:intergenic
GTACCTGCTGCAGTAATTGC+AGG 0.389830 7_4:-57885481 Msa1165860:CDS
AAAATAACAAGCACGCATTA+GGG 0.397015 7_4:+57885156 None:intergenic
ATATCAAAGACTATTGTTAA+GGG 0.409296 7_4:-57885559 Msa1165860:CDS
CAACACACTTGGTGTGTCAT+TGG 0.413477 7_4:-57885704 Msa1165860:CDS
TTAACAGCGATTCTAGTGAA+TGG 0.422863 7_4:-57885859 Msa1165860:intron
TTGAAGGTCAATTAGATGTT+GGG 0.424187 7_4:-57885606 Msa1165860:CDS
AATGTGTTGTTTGTGGCTCC+TGG 0.432005 7_4:+57885772 None:intergenic
CACCAAGTGTGTTGAGTCCT+GGG 0.432787 7_4:+57885713 None:intergenic
GAAACATTTGTGTTTCCTAA+AGG 0.432964 7_4:-57885535 Msa1165860:CDS
GTCAAAATATTATCTGGAAC+AGG 0.434168 7_4:+57885397 None:intergenic
GAGATTGTGTTTGTTCTTGA+AGG 0.435097 7_4:-57885622 Msa1165860:CDS
GGAGCCACAAACAACACATT+TGG 0.436644 7_4:-57885769 Msa1165860:CDS
CTTGAAGGTCAATTAGATGT+TGG 0.439258 7_4:-57885607 Msa1165860:CDS
TTTGAAAACCAATTATATGT+AGG 0.446939 7_4:+57886633 None:intergenic
ATTTGTGTTTCCTAAAGGAT+TGG 0.463106 7_4:-57885530 Msa1165860:CDS
TCTTCTCACTTAAAATAAAG+TGG 0.475636 7_4:+57886812 None:intergenic
AACATTGGCTAAGGTTACTA+AGG 0.477034 7_4:+57885744 None:intergenic
ACAGAGGTCTTGAAGATTGT+CGG 0.481708 7_4:+57886512 None:intergenic
CAGAGGTCTTGAAGATTGTC+GGG 0.482659 7_4:+57886513 None:intergenic
GTAGAAGCAAACAAAGTAAG+AGG 0.485526 7_4:+57885424 None:intergenic
TGGTTTGGCTAGTACGTTGG+TGG 0.495482 7_4:+57885792 None:intergenic
GAGTTGGAATGAAGTGGTAA+TGG 0.496464 7_4:+57886703 None:intergenic
TCGGTGACAAACAAATTAAC+CGG 0.501973 7_4:+57886605 None:intergenic
GAGCAATATGAATTATGAGT+TGG 0.502930 7_4:+57886687 None:intergenic
TCCTGGTTTGGCTAGTACGT+TGG 0.504209 7_4:+57885789 None:intergenic
GCTTCATCATTTGTTATGAT+CGG 0.509664 7_4:+57886586 None:intergenic
AGTTGGAATGAAGTGGTAAT+GGG 0.516652 7_4:+57886704 None:intergenic
GAAATCAGCTGCGGTTACAT+TGG 0.516657 7_4:+57885816 None:intergenic
AATCCTGCAATTACTGCAGC+AGG 0.520151 7_4:+57885478 None:intergenic
GCTGCGGTTACATTGGAAGC+TGG 0.520487 7_4:+57885823 None:intergenic
ACACCAAGTGTGTTGAGTCC+TGG 0.524633 7_4:+57885712 None:intergenic
GGAACCAAATGTGTTGTTTG+TGG 0.527740 7_4:+57885765 None:intergenic
TGGAAGAGAGACAGAAGACT+TGG 0.528749 7_4:+57886755 None:intergenic
GCACCCAAGTAGTGAGATCA+AGG 0.528959 7_4:-57885322 Msa1165860:exon
CAAATGATGAAGCTCCTCGC+AGG 0.535137 7_4:-57886576 Msa1165860:CDS
TACAAATTTCAATCAACCAA+AGG 0.542939 7_4:+57885183 None:intergenic
ATTTATACCAAGAGAAGACT+TGG 0.545538 7_4:+57886735 None:intergenic
GCCAATGTTCAGAAAATCCC+AGG 0.563692 7_4:-57885730 Msa1165860:CDS
ATCCCAGGACTCAACACACT+TGG 0.570656 7_4:-57885715 Msa1165860:CDS
CACGTGGGTGAGTGTGAGGT+GGG 0.576033 7_4:+57885650 None:intergenic
AAGTTCAGAAAATCAAGTCT+AGG 0.576600 7_4:-57885348 Msa1165860:CDS
GCACGTGGGTGAGTGTGAGG+TGG 0.584372 7_4:+57885649 None:intergenic
AAATGATGAAGCTCCTCGCA+GGG 0.586522 7_4:-57886575 Msa1165860:CDS
AGCATTCCAAATTGGTACCA+AGG 0.587841 7_4:-57885371 Msa1165860:CDS
TGGAACTCATAAAACAATTG+GGG 0.593765 7_4:-57885225 Msa1165860:three_prime_UTR
AATCCTTGATCTCACTACTT+GGG 0.605443 7_4:+57885319 None:intergenic
CAATAGTCAATTGCAAGGAA+CGG 0.606871 7_4:-57885455 Msa1165860:CDS
AACACAATCTCAGTTGCACG+TGG 0.610170 7_4:+57885634 None:intergenic
ACCAACGTACTAGCCAAACC+AGG 0.618402 7_4:-57885790 Msa1165860:CDS
CGTATTGACTATGCTGTAGG+TGG 0.621828 7_4:-57885679 Msa1165860:CDS
GTTCATTTCCAAAAGAACAG+TGG 0.623665 7_4:-57885508 Msa1165860:CDS
AAAATATTATCTGGAACAGG+TGG 0.624953 7_4:+57885400 None:intergenic
ATGTAACGGTACCAGAAGCA+AGG 0.638804 7_4:+57886481 None:intergenic
CAAAGTTAAATAAAATGCAG+AGG 0.642749 7_4:+57885267 None:intergenic
GGATTCAATAGTCAATTGCA+AGG 0.643876 7_4:-57885460 Msa1165860:CDS
AATTATGAGTTGGAATGAAG+TGG 0.654204 7_4:+57886697 None:intergenic
GCACGTATTGACTATGCTGT+AGG 0.654744 7_4:-57885682 Msa1165860:CDS
GTTGCACGTGGGTGAGTGTG+AGG 0.660628 7_4:+57885646 None:intergenic
GTCGGGATCAGCAGTGACAG+AGG 0.662254 7_4:+57886530 None:intergenic
CCAGAAGCAACAACCCTGCG+AGG 0.671018 7_4:+57886562 None:intergenic
GGGATCAGCAGTGACAGAGG+TGG 0.687303 7_4:+57886533 None:intergenic
GTTGGTGGAGAAATCAGCTG+CGG 0.730459 7_4:+57885807 None:intergenic
ACACAATCTCAGTTGCACGT+GGG 0.741428 7_4:+57885635 None:intergenic
AAGCAAGGTCTGCAACACAG+AGG 0.751663 7_4:+57886496 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATATAAGAAAG+AGG + chr7_4:57885628-57885647 None:intergenic 10.0%
!! TATGATATTATAAAAGATAA+GGG + chr7_4:57885788-57885807 None:intergenic 10.0%
!! AAAAAAAAAATATAAGAAAG+AGG + chr7_4:57885628-57885647 None:intergenic 10.0%
!! TATGATATTATAAAAGATAA+GGG + chr7_4:57885788-57885807 None:intergenic 10.0%
!! ATAAACAAGCTATATAAAAA+AGG + chr7_4:57885240-57885259 None:intergenic 15.0%
!! AAAGTTAATCATATTCATAT+AGG + chr7_4:57885754-57885773 None:intergenic 15.0%
!! GTATGATATTATAAAAGATA+AGG + chr7_4:57885789-57885808 None:intergenic 15.0%
!! ATAAACAAGCTATATAAAAA+AGG + chr7_4:57885240-57885259 None:intergenic 15.0%
!! AAAGTTAATCATATTCATAT+AGG + chr7_4:57885754-57885773 None:intergenic 15.0%
!! GTATGATATTATAAAAGATA+AGG + chr7_4:57885789-57885808 None:intergenic 15.0%
!! GCAAGAATTAATATAGTATA+AGG + chr7_4:57885118-57885137 None:intergenic 20.0%
!! TTTGAAAACCAATTATATGT+AGG + chr7_4:57885272-57885291 None:intergenic 20.0%
!! TTAATCATATTCATATAGGT+GGG + chr7_4:57885750-57885769 None:intergenic 20.0%
!! ATATCAAAGACTATTGTTAA+GGG - chr7_4:57886343-57886362 Msa1165860:intron 20.0%
!!! TTGTTATTTTTGCAATTATG+TGG - chr7_4:57886784-57886803 Msa1165860:five_prime_UTR 20.0%
!! GCAAGAATTAATATAGTATA+AGG + chr7_4:57885118-57885137 None:intergenic 20.0%
!! TTTGAAAACCAATTATATGT+AGG + chr7_4:57885272-57885291 None:intergenic 20.0%
!! TTAATCATATTCATATAGGT+GGG + chr7_4:57885750-57885769 None:intergenic 20.0%
!! ATATCAAAGACTATTGTTAA+GGG - chr7_4:57886343-57886362 Msa1165860:intron 20.0%
!!! TTGTTATTTTTGCAATTATG+TGG - chr7_4:57886784-57886803 Msa1165860:five_prime_UTR 20.0%
! TCTTCTCACTTAAAATAAAG+TGG + chr7_4:57885093-57885112 None:intergenic 25.0%
! GTACTTAGCAACATTAATTA+TGG - chr7_4:57885535-57885554 Msa1165860:CDS 25.0%
! GGAAAAAGTGAAAATGAAAA+GGG + chr7_4:57885586-57885605 None:intergenic 25.0%
! GGATTGCATATAATGATTAA+GGG + chr7_4:57885607-57885626 None:intergenic 25.0%
! AGGATTGCATATAATGATTA+AGG + chr7_4:57885608-57885627 None:intergenic 25.0%
! TCAATAAAAAGCCATATCAA+AGG + chr7_4:57885697-57885716 None:intergenic 25.0%
! GTTAATCATATTCATATAGG+TGG + chr7_4:57885751-57885770 None:intergenic 25.0%
!! CATATTATTGATAGCATGAT+TGG - chr7_4:57885877-57885896 Msa1165860:intron 25.0%
! TTATGGTTGAATTATTGTGA+TGG - chr7_4:57885992-57886011 Msa1165860:intron 25.0%
! GATATCAAAGACTATTGTTA+AGG - chr7_4:57886342-57886361 Msa1165860:intron 25.0%
! CAAAGTTAAATAAAATGCAG+AGG + chr7_4:57886638-57886657 None:intergenic 25.0%
!! GTTGATTTACATTTCATGTT+TGG - chr7_4:57886657-57886676 Msa1165860:five_prime_UTR 25.0%
!! TTTGGAACTCATAAAACAAT+TGG - chr7_4:57886675-57886694 Msa1165860:five_prime_UTR 25.0%
! TTGGAACTCATAAAACAATT+GGG - chr7_4:57886676-57886695 Msa1165860:five_prime_UTR 25.0%
!! GTTCAATATTCATTTTCCTT+TGG - chr7_4:57886703-57886722 Msa1165860:five_prime_UTR 25.0%
! TACAAATTTCAATCAACCAA+AGG + chr7_4:57886722-57886741 None:intergenic 25.0%
! TCTTCTCACTTAAAATAAAG+TGG + chr7_4:57885093-57885112 None:intergenic 25.0%
! GTACTTAGCAACATTAATTA+TGG - chr7_4:57885535-57885554 Msa1165860:CDS 25.0%
! GGAAAAAGTGAAAATGAAAA+GGG + chr7_4:57885586-57885605 None:intergenic 25.0%
! GGATTGCATATAATGATTAA+GGG + chr7_4:57885607-57885626 None:intergenic 25.0%
! AGGATTGCATATAATGATTA+AGG + chr7_4:57885608-57885627 None:intergenic 25.0%
! TCAATAAAAAGCCATATCAA+AGG + chr7_4:57885697-57885716 None:intergenic 25.0%
! GTTAATCATATTCATATAGG+TGG + chr7_4:57885751-57885770 None:intergenic 25.0%
!! CATATTATTGATAGCATGAT+TGG - chr7_4:57885877-57885896 Msa1165860:intron 25.0%
! TTATGGTTGAATTATTGTGA+TGG - chr7_4:57885992-57886011 Msa1165860:intron 25.0%
! GATATCAAAGACTATTGTTA+AGG - chr7_4:57886342-57886361 Msa1165860:intron 25.0%
! CAAAGTTAAATAAAATGCAG+AGG + chr7_4:57886638-57886657 None:intergenic 25.0%
!! GTTGATTTACATTTCATGTT+TGG - chr7_4:57886657-57886676 Msa1165860:five_prime_UTR 25.0%
!! TTTGGAACTCATAAAACAAT+TGG - chr7_4:57886675-57886694 Msa1165860:five_prime_UTR 25.0%
! TTGGAACTCATAAAACAATT+GGG - chr7_4:57886676-57886695 Msa1165860:five_prime_UTR 25.0%
!! GTTCAATATTCATTTTCCTT+TGG - chr7_4:57886703-57886722 Msa1165860:five_prime_UTR 25.0%
! TACAAATTTCAATCAACCAA+AGG + chr7_4:57886722-57886741 None:intergenic 25.0%
ATTTATACCAAGAGAAGACT+TGG + chr7_4:57885170-57885189 None:intergenic 30.0%
! AATTATGAGTTGGAATGAAG+TGG + chr7_4:57885208-57885227 None:intergenic 30.0%
GAGCAATATGAATTATGAGT+TGG + chr7_4:57885218-57885237 None:intergenic 30.0%
TTGTCTTGCCTACATATAAT+TGG - chr7_4:57885261-57885280 Msa1165860:three_prime_UTR 30.0%
!!! AATTGGTTTTCAAAAGTCTC+CGG - chr7_4:57885278-57885297 Msa1165860:three_prime_UTR 30.0%
!! GCTTCATCATTTGTTATGAT+CGG + chr7_4:57885319-57885338 None:intergenic 30.0%
TTAATTATGGATCGAAAAGC+TGG - chr7_4:57885548-57885567 Msa1165860:CDS 30.0%
GGGAAAAAGTGAAAATGAAA+AGG + chr7_4:57885587-57885606 None:intergenic 30.0%
ATCCAACTAACTCTCTAATT+AGG - chr7_4:57885661-57885680 Msa1165860:CDS 30.0%
CTTCAGAAAGACACTATAAT+TGG + chr7_4:57885814-57885833 None:intergenic 30.0%
CAATTATAGTGTCTTTCTGA+AGG - chr7_4:57885812-57885831 Msa1165860:CDS 30.0%
! CGATATACATACTTGTTTCT+TGG - chr7_4:57885943-57885962 Msa1165860:intron 30.0%
TTCTTGTCTCACAATTCTTA+TGG - chr7_4:57885975-57885994 Msa1165860:intron 30.0%
TTGAAGGTCAATTAGATGTT+GGG - chr7_4:57886296-57886315 Msa1165860:intron 30.0%
GAAACATTTGTGTTTCCTAA+AGG - chr7_4:57886367-57886386 Msa1165860:intron 30.0%
ATTTGTGTTTCCTAAAGGAT+TGG - chr7_4:57886372-57886391 Msa1165860:intron 30.0%
! AAAATATTATCTGGAACAGG+TGG + chr7_4:57886505-57886524 None:intergenic 30.0%
! GTCAAAATATTATCTGGAAC+AGG + chr7_4:57886508-57886527 None:intergenic 30.0%
GCTTGAGTCAAAATATTATC+TGG + chr7_4:57886514-57886533 None:intergenic 30.0%
AAGTTCAGAAAATCAAGTCT+AGG - chr7_4:57886554-57886573 Msa1165860:CDS 30.0%
TGGAACTCATAAAACAATTG+GGG - chr7_4:57886677-57886696 Msa1165860:five_prime_UTR 30.0%
AAAATAACAAGCACGCATTA+GGG + chr7_4:57886749-57886768 None:intergenic 30.0%
ATTTATACCAAGAGAAGACT+TGG + chr7_4:57885170-57885189 None:intergenic 30.0%
! AATTATGAGTTGGAATGAAG+TGG + chr7_4:57885208-57885227 None:intergenic 30.0%
GAGCAATATGAATTATGAGT+TGG + chr7_4:57885218-57885237 None:intergenic 30.0%
TTGTCTTGCCTACATATAAT+TGG - chr7_4:57885261-57885280 Msa1165860:three_prime_UTR 30.0%
!!! AATTGGTTTTCAAAAGTCTC+CGG - chr7_4:57885278-57885297 Msa1165860:three_prime_UTR 30.0%
!! GCTTCATCATTTGTTATGAT+CGG + chr7_4:57885319-57885338 None:intergenic 30.0%
TTAATTATGGATCGAAAAGC+TGG - chr7_4:57885548-57885567 Msa1165860:CDS 30.0%
GGGAAAAAGTGAAAATGAAA+AGG + chr7_4:57885587-57885606 None:intergenic 30.0%
ATCCAACTAACTCTCTAATT+AGG - chr7_4:57885661-57885680 Msa1165860:CDS 30.0%
CTTCAGAAAGACACTATAAT+TGG + chr7_4:57885814-57885833 None:intergenic 30.0%
CAATTATAGTGTCTTTCTGA+AGG - chr7_4:57885812-57885831 Msa1165860:CDS 30.0%
! CGATATACATACTTGTTTCT+TGG - chr7_4:57885943-57885962 Msa1165860:intron 30.0%
TTCTTGTCTCACAATTCTTA+TGG - chr7_4:57885975-57885994 Msa1165860:intron 30.0%
TTGAAGGTCAATTAGATGTT+GGG - chr7_4:57886296-57886315 Msa1165860:intron 30.0%
GAAACATTTGTGTTTCCTAA+AGG - chr7_4:57886367-57886386 Msa1165860:intron 30.0%
ATTTGTGTTTCCTAAAGGAT+TGG - chr7_4:57886372-57886391 Msa1165860:intron 30.0%
! AAAATATTATCTGGAACAGG+TGG + chr7_4:57886505-57886524 None:intergenic 30.0%
! GTCAAAATATTATCTGGAAC+AGG + chr7_4:57886508-57886527 None:intergenic 30.0%
GCTTGAGTCAAAATATTATC+TGG + chr7_4:57886514-57886533 None:intergenic 30.0%
AAGTTCAGAAAATCAAGTCT+AGG - chr7_4:57886554-57886573 Msa1165860:CDS 30.0%
TGGAACTCATAAAACAATTG+GGG - chr7_4:57886677-57886696 Msa1165860:five_prime_UTR 30.0%
AAAATAACAAGCACGCATTA+GGG + chr7_4:57886749-57886768 None:intergenic 30.0%
AGTTGGAATGAAGTGGTAAT+GGG + chr7_4:57885201-57885220 None:intergenic 35.0%
TCGGTGACAAACAAATTAAC+CGG + chr7_4:57885300-57885319 None:intergenic 35.0%
! AAAAGCCATATCAAAGGTGT+TGG + chr7_4:57885691-57885710 None:intergenic 35.0%
TGGTTGAATTATTGTGATGG+TGG - chr7_4:57885995-57886014 Msa1165860:intron 35.0%
TTAACAGCGATTCTAGTGAA+TGG - chr7_4:57886043-57886062 Msa1165860:intron 35.0%
! AACATTGGCTAAGGTTACTA+AGG + chr7_4:57886161-57886180 None:intergenic 35.0%
!! GATTTTCTGAACATTGGCTA+AGG + chr7_4:57886170-57886189 None:intergenic 35.0%
GAGATTGTGTTTGTTCTTGA+AGG - chr7_4:57886280-57886299 Msa1165860:intron 35.0%
CTTGAAGGTCAATTAGATGT+TGG - chr7_4:57886295-57886314 Msa1165860:intron 35.0%
TGGAAATGAACCAATCCTTT+AGG + chr7_4:57886385-57886404 None:intergenic 35.0%
GTTCATTTCCAAAAGAACAG+TGG - chr7_4:57886394-57886413 Msa1165860:intron 35.0%
! GTACATAACCACTGTTCTTT+TGG + chr7_4:57886405-57886424 None:intergenic 35.0%
GGATTCAATAGTCAATTGCA+AGG - chr7_4:57886442-57886461 Msa1165860:intron 35.0%
CAATAGTCAATTGCAAGGAA+CGG - chr7_4:57886447-57886466 Msa1165860:intron 35.0%
GTAGAAGCAAACAAAGTAAG+AGG + chr7_4:57886481-57886500 None:intergenic 35.0%
TTGACTCAAGCATTCCAAAT+TGG - chr7_4:57886523-57886542 Msa1165860:CDS 35.0%
! CTTGATTTTCTGAACTTCCT+TGG + chr7_4:57886551-57886570 None:intergenic 35.0%
AATCCTTGATCTCACTACTT+GGG + chr7_4:57886586-57886605 None:intergenic 35.0%
CAAAATAACAAGCACGCATT+AGG + chr7_4:57886750-57886769 None:intergenic 35.0%
!!! CTAATGCGTGCTTGTTATTT+TGG - chr7_4:57886748-57886767 Msa1165860:five_prime_UTR 35.0%
AGTTGGAATGAAGTGGTAAT+GGG + chr7_4:57885201-57885220 None:intergenic 35.0%
TCGGTGACAAACAAATTAAC+CGG + chr7_4:57885300-57885319 None:intergenic 35.0%
! AAAAGCCATATCAAAGGTGT+TGG + chr7_4:57885691-57885710 None:intergenic 35.0%
TGGTTGAATTATTGTGATGG+TGG - chr7_4:57885995-57886014 Msa1165860:intron 35.0%
TTAACAGCGATTCTAGTGAA+TGG - chr7_4:57886043-57886062 Msa1165860:intron 35.0%
! AACATTGGCTAAGGTTACTA+AGG + chr7_4:57886161-57886180 None:intergenic 35.0%
!! GATTTTCTGAACATTGGCTA+AGG + chr7_4:57886170-57886189 None:intergenic 35.0%
GAGATTGTGTTTGTTCTTGA+AGG - chr7_4:57886280-57886299 Msa1165860:intron 35.0%
CTTGAAGGTCAATTAGATGT+TGG - chr7_4:57886295-57886314 Msa1165860:intron 35.0%
TGGAAATGAACCAATCCTTT+AGG + chr7_4:57886385-57886404 None:intergenic 35.0%
GTTCATTTCCAAAAGAACAG+TGG - chr7_4:57886394-57886413 Msa1165860:intron 35.0%
! GTACATAACCACTGTTCTTT+TGG + chr7_4:57886405-57886424 None:intergenic 35.0%
GGATTCAATAGTCAATTGCA+AGG - chr7_4:57886442-57886461 Msa1165860:intron 35.0%
CAATAGTCAATTGCAAGGAA+CGG - chr7_4:57886447-57886466 Msa1165860:intron 35.0%
GTAGAAGCAAACAAAGTAAG+AGG + chr7_4:57886481-57886500 None:intergenic 35.0%
TTGACTCAAGCATTCCAAAT+TGG - chr7_4:57886523-57886542 Msa1165860:CDS 35.0%
! CTTGATTTTCTGAACTTCCT+TGG + chr7_4:57886551-57886570 None:intergenic 35.0%
AATCCTTGATCTCACTACTT+GGG + chr7_4:57886586-57886605 None:intergenic 35.0%
CAAAATAACAAGCACGCATT+AGG + chr7_4:57886750-57886769 None:intergenic 35.0%
!!! CTAATGCGTGCTTGTTATTT+TGG - chr7_4:57886748-57886767 Msa1165860:five_prime_UTR 35.0%
GAGTTGGAATGAAGTGGTAA+TGG + chr7_4:57885202-57885221 None:intergenic 40.0%
ACAGAGGTCTTGAAGATTGT+CGG + chr7_4:57885393-57885412 None:intergenic 40.0%
GGCCTAATTAGAGAGTTAGT+TGG + chr7_4:57885666-57885685 None:intergenic 40.0%
!! GGAACCAAATGTGTTGTTTG+TGG + chr7_4:57886140-57886159 None:intergenic 40.0%
! TCCTGGGATTTTCTGAACAT+TGG + chr7_4:57886176-57886195 None:intergenic 40.0%
AGCATTCCAAATTGGTACCA+AGG - chr7_4:57886531-57886550 Msa1165860:CDS 40.0%
GAACTTCCTTGGTACCAATT+TGG + chr7_4:57886540-57886559 None:intergenic 40.0%
CAATCCTTGATCTCACTACT+TGG + chr7_4:57886587-57886606 None:intergenic 40.0%
GAGTTGGAATGAAGTGGTAA+TGG + chr7_4:57885202-57885221 None:intergenic 40.0%
ACAGAGGTCTTGAAGATTGT+CGG + chr7_4:57885393-57885412 None:intergenic 40.0%
GGCCTAATTAGAGAGTTAGT+TGG + chr7_4:57885666-57885685 None:intergenic 40.0%
!! GGAACCAAATGTGTTGTTTG+TGG + chr7_4:57886140-57886159 None:intergenic 40.0%
! TCCTGGGATTTTCTGAACAT+TGG + chr7_4:57886176-57886195 None:intergenic 40.0%
AGCATTCCAAATTGGTACCA+AGG - chr7_4:57886531-57886550 Msa1165860:CDS 40.0%
GAACTTCCTTGGTACCAATT+TGG + chr7_4:57886540-57886559 None:intergenic 40.0%
CAATCCTTGATCTCACTACT+TGG + chr7_4:57886587-57886606 None:intergenic 40.0%
TGGAAGAGAGACAGAAGACT+TGG + chr7_4:57885150-57885169 None:intergenic 45.0%
CTCTCTTCCAAGTCTTCTCT+TGG - chr7_4:57885160-57885179 Msa1165860:three_prime_UTR 45.0%
AAATGATGAAGCTCCTCGCA+GGG - chr7_4:57885327-57885346 Msa1165860:exon 45.0%
CAGAGGTCTTGAAGATTGTC+GGG + chr7_4:57885392-57885411 None:intergenic 45.0%
ATGTAACGGTACCAGAAGCA+AGG + chr7_4:57885424-57885443 None:intergenic 45.0%
GCCTACCAACACCTTTGATA+TGG - chr7_4:57885683-57885702 Msa1165860:CDS 45.0%
!! GCCATATCAAAGGTGTTGGT+AGG + chr7_4:57885687-57885706 None:intergenic 45.0%
GAAATCAGCTGCGGTTACAT+TGG + chr7_4:57886089-57886108 None:intergenic 45.0%
!! AATGTGTTGTTTGTGGCTCC+TGG + chr7_4:57886133-57886152 None:intergenic 45.0%
GGAGCCACAAACAACACATT+TGG - chr7_4:57886133-57886152 Msa1165860:intron 45.0%
GCCAATGTTCAGAAAATCCC+AGG - chr7_4:57886172-57886191 Msa1165860:intron 45.0%
!! CAACACACTTGGTGTGTCAT+TGG - chr7_4:57886198-57886217 Msa1165860:intron 45.0%
!! GCACGTATTGACTATGCTGT+AGG - chr7_4:57886220-57886239 Msa1165860:intron 45.0%
!! CGTATTGACTATGCTGTAGG+TGG - chr7_4:57886223-57886242 Msa1165860:intron 45.0%
ACACAATCTCAGTTGCACGT+GGG + chr7_4:57886270-57886289 None:intergenic 45.0%
AACACAATCTCAGTTGCACG+TGG + chr7_4:57886271-57886290 None:intergenic 45.0%
AATCCTGCAATTACTGCAGC+AGG + chr7_4:57886427-57886446 None:intergenic 45.0%
TGGAAGAGAGACAGAAGACT+TGG + chr7_4:57885150-57885169 None:intergenic 45.0%
CTCTCTTCCAAGTCTTCTCT+TGG - chr7_4:57885160-57885179 Msa1165860:three_prime_UTR 45.0%
AAATGATGAAGCTCCTCGCA+GGG - chr7_4:57885327-57885346 Msa1165860:exon 45.0%
CAGAGGTCTTGAAGATTGTC+GGG + chr7_4:57885392-57885411 None:intergenic 45.0%
ATGTAACGGTACCAGAAGCA+AGG + chr7_4:57885424-57885443 None:intergenic 45.0%
GCCTACCAACACCTTTGATA+TGG - chr7_4:57885683-57885702 Msa1165860:CDS 45.0%
!! GCCATATCAAAGGTGTTGGT+AGG + chr7_4:57885687-57885706 None:intergenic 45.0%
GAAATCAGCTGCGGTTACAT+TGG + chr7_4:57886089-57886108 None:intergenic 45.0%
!! AATGTGTTGTTTGTGGCTCC+TGG + chr7_4:57886133-57886152 None:intergenic 45.0%
GGAGCCACAAACAACACATT+TGG - chr7_4:57886133-57886152 Msa1165860:intron 45.0%
GCCAATGTTCAGAAAATCCC+AGG - chr7_4:57886172-57886191 Msa1165860:intron 45.0%
!! CAACACACTTGGTGTGTCAT+TGG - chr7_4:57886198-57886217 Msa1165860:intron 45.0%
!! GCACGTATTGACTATGCTGT+AGG - chr7_4:57886220-57886239 Msa1165860:intron 45.0%
!! CGTATTGACTATGCTGTAGG+TGG - chr7_4:57886223-57886242 Msa1165860:intron 45.0%
ACACAATCTCAGTTGCACGT+GGG + chr7_4:57886270-57886289 None:intergenic 45.0%
AACACAATCTCAGTTGCACG+TGG + chr7_4:57886271-57886290 None:intergenic 45.0%
AATCCTGCAATTACTGCAGC+AGG + chr7_4:57886427-57886446 None:intergenic 45.0%
!! ATTATTATTAATTAATGTAA+CGG + chr7_4:57885438-57885457 None:intergenic 5.0%
!! ATTATTATTAATTAATGTAA+CGG + chr7_4:57885438-57885457 None:intergenic 5.0%
CAAATGATGAAGCTCCTCGC+AGG - chr7_4:57885326-57885345 Msa1165860:exon 50.0%
AAGCAAGGTCTGCAACACAG+AGG + chr7_4:57885409-57885428 None:intergenic 50.0%
TGTGTTGCAGACCTTGCTTC+TGG - chr7_4:57885410-57885429 Msa1165860:CDS 50.0%
! GTTGGTGGAGAAATCAGCTG+CGG + chr7_4:57886098-57886117 None:intergenic 50.0%
! TGGTTTGGCTAGTACGTTGG+TGG + chr7_4:57886113-57886132 None:intergenic 50.0%
ACCAACGTACTAGCCAAACC+AGG - chr7_4:57886112-57886131 Msa1165860:intron 50.0%
!! TCCTGGTTTGGCTAGTACGT+TGG + chr7_4:57886116-57886135 None:intergenic 50.0%
GTTGTTTGTGGCTCCTGGTT+TGG + chr7_4:57886128-57886147 None:intergenic 50.0%
ATCCCAGGACTCAACACACT+TGG - chr7_4:57886187-57886206 Msa1165860:intron 50.0%
CACCAAGTGTGTTGAGTCCT+GGG + chr7_4:57886192-57886211 None:intergenic 50.0%
ACACCAAGTGTGTTGAGTCC+TGG + chr7_4:57886193-57886212 None:intergenic 50.0%
GTACCTGCTGCAGTAATTGC+AGG - chr7_4:57886421-57886440 Msa1165860:intron 50.0%
GCACCCAAGTAGTGAGATCA+AGG - chr7_4:57886580-57886599 Msa1165860:exon 50.0%
CAAATGATGAAGCTCCTCGC+AGG - chr7_4:57885326-57885345 Msa1165860:exon 50.0%
AAGCAAGGTCTGCAACACAG+AGG + chr7_4:57885409-57885428 None:intergenic 50.0%
TGTGTTGCAGACCTTGCTTC+TGG - chr7_4:57885410-57885429 Msa1165860:CDS 50.0%
! GTTGGTGGAGAAATCAGCTG+CGG + chr7_4:57886098-57886117 None:intergenic 50.0%
! TGGTTTGGCTAGTACGTTGG+TGG + chr7_4:57886113-57886132 None:intergenic 50.0%
ACCAACGTACTAGCCAAACC+AGG - chr7_4:57886112-57886131 Msa1165860:intron 50.0%
!! TCCTGGTTTGGCTAGTACGT+TGG + chr7_4:57886116-57886135 None:intergenic 50.0%
GTTGTTTGTGGCTCCTGGTT+TGG + chr7_4:57886128-57886147 None:intergenic 50.0%
ATCCCAGGACTCAACACACT+TGG - chr7_4:57886187-57886206 Msa1165860:intron 50.0%
CACCAAGTGTGTTGAGTCCT+GGG + chr7_4:57886192-57886211 None:intergenic 50.0%
ACACCAAGTGTGTTGAGTCC+TGG + chr7_4:57886193-57886212 None:intergenic 50.0%
GTACCTGCTGCAGTAATTGC+AGG - chr7_4:57886421-57886440 Msa1165860:intron 50.0%
GCACCCAAGTAGTGAGATCA+AGG - chr7_4:57886580-57886599 Msa1165860:exon 50.0%
GCTGCGGTTACATTGGAAGC+TGG + chr7_4:57886082-57886101 None:intergenic 55.0%
GCTGCGGTTACATTGGAAGC+TGG + chr7_4:57886082-57886101 None:intergenic 55.0%
CCAGAAGCAACAACCCTGCG+AGG + chr7_4:57885343-57885362 None:intergenic 60.0%
! CCTCGCAGGGTTGTTGCTTC+TGG - chr7_4:57885340-57885359 Msa1165860:CDS 60.0%
GGGATCAGCAGTGACAGAGG+TGG + chr7_4:57885372-57885391 None:intergenic 60.0%
GTCGGGATCAGCAGTGACAG+AGG + chr7_4:57885375-57885394 None:intergenic 60.0%
CACGTGGGTGAGTGTGAGGT+GGG + chr7_4:57886255-57886274 None:intergenic 60.0%
GTTGCACGTGGGTGAGTGTG+AGG + chr7_4:57886259-57886278 None:intergenic 60.0%
CCAGAAGCAACAACCCTGCG+AGG + chr7_4:57885343-57885362 None:intergenic 60.0%
! CCTCGCAGGGTTGTTGCTTC+TGG - chr7_4:57885340-57885359 Msa1165860:CDS 60.0%
GGGATCAGCAGTGACAGAGG+TGG + chr7_4:57885372-57885391 None:intergenic 60.0%
GTCGGGATCAGCAGTGACAG+AGG + chr7_4:57885375-57885394 None:intergenic 60.0%
CACGTGGGTGAGTGTGAGGT+GGG + chr7_4:57886255-57886274 None:intergenic 60.0%
GTTGCACGTGGGTGAGTGTG+AGG + chr7_4:57886259-57886278 None:intergenic 60.0%
GCACGTGGGTGAGTGTGAGG+TGG + chr7_4:57886256-57886275 None:intergenic 65.0%
GCACGTGGGTGAGTGTGAGG+TGG + chr7_4:57886256-57886275 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 57885082 57886842 57885082 ID=Msa1165860;Name=Msa1165860
chr7_4 mRNA 57885082 57886842 57885082 ID=Msa1165860-mRNA-1;Parent=Msa1165860;Name=Msa1165860-mRNA-1;_AED=0.04;_eAED=0.04;_QI=247|1|1|1|1|1|2|251|214
chr7_4 exon 57885082 57885874 57885082 ID=Msa1165860-mRNA-1:exon:17550;Parent=Msa1165860-mRNA-1
chr7_4 exon 57886493 57886842 57886493 ID=Msa1165860-mRNA-1:exon:17549;Parent=Msa1165860-mRNA-1
chr7_4 five_prime_UTR 57886596 57886842 57886596 ID=Msa1165860-mRNA-1:five_prime_utr;Parent=Msa1165860-mRNA-1
chr7_4 CDS 57886493 57886595 57886493 ID=Msa1165860-mRNA-1:cds;Parent=Msa1165860-mRNA-1
chr7_4 CDS 57885333 57885874 57885333 ID=Msa1165860-mRNA-1:cds;Parent=Msa1165860-mRNA-1
chr7_4 three_prime_UTR 57885082 57885332 57885082 ID=Msa1165860-mRNA-1:three_prime_utr;Parent=Msa1165860-mRNA-1
Gene Sequence

>Msa1165860

ATGATGAAGCTCCTCGCAGGGTTGTTGCTTCTGGTGTTAACCACCTCTGTCACTGCTGATCCCGACAATCTTCAAGACCTCTGTGTTGCAGACCTTGCTTCTGCGATTCTAGTGAATGGATTCACGTGCAAACCAGCTTCCAATGTAACCGCAGCTGATTTCTCCACCAACGTACTAGCCAAACCAGGAGCCACAAACAACACATTTGGTTCCTTAGTAACCTTAGCCAATGTTCAGAAAATCCCAGGACTCAACACACTTGGTGTGTCATTGGCACGTATTGACTATGCTGTAGGTGGACTGAACCCACCTCACACTCACCCACGTGCAACTGAGATTGTGTTTGTTCTTGAAGGTCAATTAGATGTTGGGTTTATTACAACAAATAATGTTTTGATATCAAAGACTATTGTTAAGGGTGAAACATTTGTGTTTCCTAAAGGATTGGTTCATTTCCAAAAGAACAGTGGTTATGTACCTGCTGCAGTAATTGCAGGATTCAATAGTCAATTGCAAGGAACGGTGAATATTCCTCTTACTTTGTTTGCTTCTACACCACCTGTTCCAGATAATATTTTGACTCAAGCATTCCAAATTGGTACCAAGGAAGTTCAGAAAATCAAGTCTAGGCTTGCACCCAAGTAG

Protein sequence

>Msa1165860

MMKLLAGLLLLVLTTSVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVFVLEGQLDVGFITTNNVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFASTPPVPDNILTQAFQIGTKEVQKIKSRLAPK*