AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1209390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209390 MtrunA17_Chr4g0058791 96.596 235 8 0 1 235 1 235 9.51e-170 468
Msa1209390 MtrunA17_Chr4g0058811 78.313 249 51 3 1 246 1 249 7.09e-141 395
Msa1209390 MtrunA17_Chr3g0131581 34.591 159 102 2 68 225 66 223 1.70e-26 103
Msa1209390 MtrunA17_Chr8g0385691 26.866 201 145 2 26 225 4 203 2.30e-24 97.8
Msa1209390 MtrunA17_Chr8g0385681 25.980 204 145 3 27 225 4 206 3.94e-23 94.7
Msa1209390 MtrunA17_Chr3g0115591 27.160 162 116 1 72 233 52 211 1.41e-21 91.7
Msa1209390 MtrunA17_Chr5g0425421 24.375 160 119 1 72 231 49 206 1.42e-14 72.0
Msa1209390 MtrunA17_Chr1g0155071 26.415 159 108 4 75 229 49 202 9.21e-14 69.3
Msa1209390 MtrunA17_Chr1g0161441 25.773 194 134 6 51 238 12 201 1.37e-13 68.6
Msa1209390 MtrunA17_Chr7g0254621 25.000 156 115 1 75 230 50 203 2.11e-13 68.9
Msa1209390 MtrunA17_Chr8g0373391 23.636 165 117 3 75 235 49 208 6.53e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209390 AT5G63060.1 57.895 228 91 2 20 246 27 250 1.14e-92 274
Msa1209390 AT5G63060.2 60.488 205 80 1 43 246 11 215 5.20e-89 263
Msa1209390 AT1G01630.1 26.471 170 121 2 68 235 49 216 1.58e-20 88.2
Msa1209390 AT4G08690.2 26.543 162 117 1 69 230 43 202 2.64e-17 80.1
Msa1209390 AT4G08690.1 26.543 162 117 1 69 230 43 202 2.64e-17 80.1
Msa1209390 AT4G08690.3 26.543 162 117 1 69 230 43 202 2.64e-17 80.1
Msa1209390 AT1G75170.2 25.641 156 113 2 75 229 50 203 2.02e-13 68.9
Msa1209390 AT1G75170.1 25.641 156 113 2 75 229 50 203 2.02e-13 68.9
Msa1209390 AT4G36640.1 26.923 156 111 2 75 229 47 200 2.61e-13 68.6
Msa1209390 AT4G36640.3 26.923 156 111 2 75 229 47 200 2.61e-13 68.6
Msa1209390 AT1G22180.2 26.220 164 119 1 72 235 49 210 6.30e-13 67.8
Msa1209390 AT1G22180.4 26.220 164 119 1 72 235 49 210 6.30e-13 67.8
Msa1209390 AT3G22410.1 24.390 164 122 2 68 230 30 192 1.27e-11 64.3
Msa1209390 AT1G14820.3 25.490 204 139 7 40 237 3 199 1.33e-11 63.2
Msa1209390 AT1G05370.1 25.806 155 114 1 75 229 48 201 2.99e-11 63.2
Msa1209390 AT1G22180.3 26.027 146 106 1 90 235 2 145 4.60e-11 61.6
Msa1209390 AT1G22180.1 26.027 146 106 1 90 235 2 145 4.60e-11 61.6
Msa1209390 AT1G14820.2 25.000 176 123 5 68 237 14 186 9.21e-11 60.8
Msa1209390 AT1G14820.1 25.000 176 123 5 68 237 14 186 9.21e-11 60.8

Find 117 sgRNAs with CRISPR-Local

Find 564 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGCACTGGAATGATTTA+AGG 0.133857 8_1:+67788866 None:intergenic
CTGCTGTGTTTAAGCCATTT+TGG 0.161420 8_1:-67795938 Msa1209390:CDS
GCAGCTCCGAACTACGAATT+TGG 0.209631 8_1:+67797391 None:intergenic
TCCAGTGCAAGTACAAAATT+TGG 0.213406 8_1:-67788855 Msa1209390:three_prime_UTR
GAACCACAAACTTGGTTCTA+AGG 0.250088 8_1:+67792339 None:intergenic
TTCAATATTGCCTCTATATA+TGG 0.250371 8_1:+67789061 None:intergenic
GTCTTCCAAGCAGACGAATT+TGG 0.270138 8_1:+67789035 None:intergenic
TCTTAAATACTTAACGTTCT+TGG 0.272685 8_1:-67790629 Msa1209390:intron
TATATGGTATTACTCTTAAA+AGG 0.280208 8_1:+67789077 None:intergenic
AACTTTCAATCTCTGAAGTT+TGG 0.282042 8_1:+67789351 None:intergenic
ATATTTGATCTCAGAGGTTT+TGG 0.288687 8_1:-67790667 Msa1209390:three_prime_UTR
ATATTTGATCTGAGAGGTTT+TGG 0.291482 8_1:-67796188 Msa1209390:CDS
CTCTTTGATTCCTACATACT+AGG 0.327480 8_1:+67789154 None:intergenic
TTCTTCATAAGCCGCCAAAA+TGG 0.332829 8_1:+67795924 None:intergenic
AACAGTATCTCTTGTATAAC+TGG 0.335272 8_1:-67788928 Msa1209390:three_prime_UTR
ATGATGAAGATATGATATTA+TGG 0.341339 8_1:-67792062 Msa1209390:three_prime_UTR
AGTTTGAGAGATATCTTTGA+TGG 0.355787 8_1:+67796556 None:intergenic
GGCTTGGTAAGCTGCCAAAT+TGG 0.365127 8_1:+67790372 None:intergenic
AGTCTTCCTGTTGGTAGAAA+TGG 0.370764 8_1:-67797155 Msa1209390:CDS
GTTAAAATCATATGCTTCTC+TGG 0.375363 8_1:-67790346 Msa1209390:intron
ATTTCTCTTGTTCGCGAGTA+TGG 0.379385 8_1:-67788796 Msa1209390:three_prime_UTR
CATAAGAAGATACAAGGAAA+TGG 0.380318 8_1:+67789177 None:intergenic
AGAGGAATTAGGCAGGAGAT+AGG 0.388870 8_1:-67789135 Msa1209390:three_prime_UTR
TTGAAGAACCATGCTTGTAT+AGG 0.390813 8_1:-67789204 Msa1209390:three_prime_UTR
AACATCTTTAACAGATTCTT+CGG 0.397936 8_1:+67791180 None:intergenic
CTTGTATAACTGGTGCAAAA+TGG 0.402372 8_1:-67788918 Msa1209390:three_prime_UTR
TGGATTGCATTTGGAGTTGA+AGG 0.404989 8_1:+67792303 None:intergenic
GTAGGAATCAAAGAGGAATT+AGG 0.406036 8_1:-67789146 Msa1209390:three_prime_UTR
AAGTACCTTGCGTGAGTCAT+TGG 0.409730 8_1:+67792283 None:intergenic
GTTAAAATCACATGCGTCTC+AGG 0.410481 8_1:-67795898 Msa1209390:intron
AGTCTTCCCGTTGGTAGAAA+TGG 0.413730 8_1:-67792090 Msa1209390:three_prime_UTR
AATACTTGCGACAATCGATT+AGG 0.432022 8_1:+67795975 None:intergenic
TCCCTACCATTTCTACCAAC+AGG 0.432057 8_1:+67797149 None:intergenic
GCATTGAGTAAGCTTCCAAC+TGG 0.432756 8_1:-67790709 Msa1209390:three_prime_UTR
CAAAGATTAATATGTGGATC+TGG 0.433208 8_1:-67789261 Msa1209390:three_prime_UTR
GTTAAAGATGTTGCTCAAAC+CGG 0.436945 8_1:-67791169 Msa1209390:three_prime_UTR
AAAATACTTGCTCCTCATAT+CGG 0.437705 8_1:+67788994 None:intergenic
ATCCCTTAGAACCAAGTTTG+TGG 0.438222 8_1:-67792342 Msa1209390:three_prime_UTR
CAAATTGGTTTAAACACAAA+AGG 0.442517 8_1:+67790387 None:intergenic
TACAATGGCTTTAGTCAACT+TGG 0.445382 8_1:+67791999 None:intergenic
TTCGAACCAAATTCGTAGTT+CGG 0.446780 8_1:-67797397 Msa1209390:CDS
AAGAGTAATACCATATATAG+AGG 0.447537 8_1:-67789071 Msa1209390:three_prime_UTR
TCCCTACCATTTCTACCAAC+GGG 0.451381 8_1:+67792084 None:intergenic
GTGAGTCATTGGATTGCATT+TGG 0.453042 8_1:+67792294 None:intergenic
AAGAACCAAATTCGTCTGCT+TGG 0.455339 8_1:-67789040 Msa1209390:three_prime_UTR
AATTCGTCTGCTTGGAAGAC+AGG 0.455469 8_1:-67789032 Msa1209390:three_prime_UTR
GTGAGTCATTGGGTTGACTT+TGG 0.459227 8_1:+67797357 None:intergenic
TGTTTATGTGATCCGATATG+AGG 0.464611 8_1:-67789006 Msa1209390:three_prime_UTR
ATCTAGAAAGTCATGAATAT+AGG 0.466876 8_1:+67791141 None:intergenic
ATAAGAAGATACAAGGAAAT+GGG 0.467633 8_1:+67789178 None:intergenic
GATAGGGAAATTATATTAGT+GGG 0.481882 8_1:-67789118 Msa1209390:three_prime_UTR
AGATAGGGAAATTATATTAG+TGG 0.482836 8_1:-67789119 Msa1209390:three_prime_UTR
CACAACCTTTGATCATCTGC+AGG 0.483883 8_1:+67796272 None:intergenic
TAAGCTTCCCACTGGGGAAG+AGG 0.489767 8_1:-67796222 Msa1209390:CDS
GACTTTCAAAGATTAATATG+TGG 0.491544 8_1:-67789267 Msa1209390:three_prime_UTR
TTTCAATCTCTGAAGTTTGG+TGG 0.495937 8_1:+67789354 None:intergenic
ATTGTCGCAAGTATTATTTG+TGG 0.503131 8_1:-67795967 Msa1209390:CDS
CAAAATGGCTTAAACACAGC+AGG 0.505889 8_1:+67795939 None:intergenic
TGAAGAAAGACGAGGAAGAG+TGG 0.506217 8_1:+67792364 None:intergenic
GAGCATAGATGCGGTGGGTG+TGG 0.511321 8_1:-67792455 Msa1209390:CDS
CATAACTTCTCATCGTCCGC+AGG 0.519330 8_1:+67790751 None:intergenic
TCTTCTTATGCCTAGTATGT+AGG 0.521688 8_1:-67789164 Msa1209390:three_prime_UTR
TGAAGAAAGACGAGGAAGAG+TGG 0.522229 8_1:+67797430 None:intergenic
ACTGGGAAAGAACAGATACT+TGG 0.523097 8_1:-67790691 Msa1209390:three_prime_UTR
GTAGTTAATTCTGGAAGTGA+AGG 0.524383 8_1:-67792136 Msa1209390:intron
AGTACTTGAGACAGTCGCTT+CGG 0.526049 8_1:+67790423 None:intergenic
CTCTGCAGAGACGGTGAGGA+AGG 0.526947 8_1:-67789400 Msa1209390:three_prime_UTR
AGAGCTTCGAACCACAAACT+TGG 0.531030 8_1:+67792331 None:intergenic
TCAACCCAATGACTCACAAA+AGG 0.531866 8_1:-67797351 Msa1209390:intron
GCATTGAGTAAGCTTCCCAC+TGG 0.533695 8_1:-67796230 Msa1209390:CDS
GCTGCGACCACCACAAGCAC+AGG 0.533870 8_1:+67791106 None:intergenic
AAGACTGAATTGAATGGCGC+TGG 0.535827 8_1:-67792408 Msa1209390:exon
AACTACGAATTTGGTTCGAA+GGG 0.536468 8_1:+67797400 None:intergenic
GAAGAGAAGACTGAATTGAA+TGG 0.536940 8_1:-67792414 Msa1209390:exon
AGACGAGGAAGAGTGGTGGT+TGG 0.537822 8_1:+67797437 None:intergenic
AACCACAAACTTGGTTCTAA+GGG 0.538296 8_1:+67792340 None:intergenic
AGTATCTGTTCTTTCCCAGT+TGG 0.541349 8_1:+67790694 None:intergenic
TCCTGTTGGTAGAAATGGTA+GGG 0.541806 8_1:-67797150 Msa1209390:CDS
GAGGAATTAGGCAGGAGATA+GGG 0.542909 8_1:-67789134 Msa1209390:three_prime_UTR
ATCCCTACCATTTCTACCAA+CGG 0.547504 8_1:+67792083 None:intergenic
GAATCAAAGAGGAATTAGGC+AGG 0.556494 8_1:-67789142 Msa1209390:three_prime_UTR
CATTGAGTAAGCTTCCCACT+GGG 0.565906 8_1:-67796229 Msa1209390:CDS
AGTATTTCCTCTTCCCCAGT+GGG 0.572654 8_1:+67796215 None:intergenic
TCCCGTTGGTAGAAATGGTA+GGG 0.573606 8_1:-67792085 Msa1209390:three_prime_UTR
GATGCTACCACCACAAGCAC+AGG 0.574890 8_1:+67796491 None:intergenic
GAACTACGAATTTGGTTCGA+AGG 0.583989 8_1:+67797399 None:intergenic
TGGCTGTTACTATGATTCAG+AGG 0.584726 8_1:-67788835 Msa1209390:three_prime_UTR
AGGACCCTGCAGATGATCAA+AGG 0.591099 8_1:-67796277 Msa1209390:CDS
ACTAGGCATAAGAAGATACA+AGG 0.594414 8_1:+67789171 None:intergenic
CTTGGAATATTTGATCTCAG+AGG 0.594486 8_1:-67790673 Msa1209390:three_prime_UTR
TTCCCGTTGGTAGAAATGGT+AGG 0.597951 8_1:-67792086 Msa1209390:three_prime_UTR
CTTGCAATATTTGATCTGAG+AGG 0.598562 8_1:-67796194 Msa1209390:CDS
TAGTTCTGGAAGTGAAAGAG+AGG 0.601503 8_1:-67797196 Msa1209390:CDS
GAATACTATAGTCTTCCTGT+TGG 0.605263 8_1:-67797164 Msa1209390:CDS
CTATGATTCAGAGGAGTACA+CGG 0.607451 8_1:-67788826 Msa1209390:three_prime_UTR
ACTGTCTCAAGTACTATTTG+CGG 0.613984 8_1:-67790415 Msa1209390:three_prime_UTR
AGAAAGACGAGGAAGAGTGG+TGG 0.617480 8_1:+67797433 None:intergenic
ATAACTTCTCATCGTCCGCA+GGG 0.626723 8_1:+67790752 None:intergenic
CATTGAGTAAGCTTCCAACT+GGG 0.632302 8_1:-67790708 Msa1209390:three_prime_UTR
CAATGACAGACCTGTGCTTG+TGG 0.634407 8_1:-67791116 Msa1209390:three_prime_UTR
AAGTATTTCCTCTTCCCCAG+TGG 0.636610 8_1:+67796214 None:intergenic
GAATACTATAGTCTTCCCGT+TGG 0.641212 8_1:-67792099 Msa1209390:three_prime_UTR
TTCCTGTTGGTAGAAATGGT+AGG 0.641255 8_1:-67797151 Msa1209390:CDS
CAACAACAGACCTGTGCTTG+TGG 0.643089 8_1:-67796501 Msa1209390:CDS
TTTGCTCTGCAGAGACGGTG+AGG 0.644052 8_1:-67789404 Msa1209390:three_prime_UTR
ATGGGATGCCTATACAAGCA+TGG 0.645803 8_1:+67789196 None:intergenic
CTAGTATGTAGGAATCAAAG+AGG 0.658964 8_1:-67789153 Msa1209390:three_prime_UTR
GCAATCCAATGACTCACGCA+AGG 0.664895 8_1:-67792288 Msa1209390:intron
ATGACGAAGATATGATACAA+TGG 0.666407 8_1:-67797127 Msa1209390:CDS
TGACAGACCTGTGCTTGTGG+TGG 0.674493 8_1:-67791113 Msa1209390:three_prime_UTR
ACAACCTTTGATCATCTGCA+GGG 0.675302 8_1:+67796273 None:intergenic
AGAAAGACGAGGAAGAGTGG+TGG 0.678032 8_1:+67792367 None:intergenic
GTCACAGGCACAGGACCCTG+CGG 0.691722 8_1:-67790767 Msa1209390:intron
CTAAGGGATGAAGAAAGACG+AGG 0.703850 8_1:+67792356 None:intergenic
GAAATTGTTGAAGAAAGACG+AGG 0.704895 8_1:+67797422 None:intergenic
CAACAGACCTGTGCTTGTGG+TGG 0.714957 8_1:-67796498 Msa1209390:CDS
ATTGAGTAAGCTTCCCACTG+GGG 0.730583 8_1:-67796228 Msa1209390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTAATATTTCTTTATTTT+TGG - chr8_1:67790170-67790189 Msa1209390:intron 10.0%
!!! TAGTTTATTGATTTTATTTT+TGG - chr8_1:67790930-67790949 Msa1209390:intron 10.0%
!! ATGAAAAATTTATTAGATAA+AGG + chr8_1:67792231-67792250 None:intergenic 10.0%
!!! AAATTTTTCATATTTTTGTT+TGG - chr8_1:67792240-67792259 Msa1209390:intron 10.0%
!! TAATAAAAATCAATATTAAC+AGG + chr8_1:67794853-67794872 None:intergenic 10.0%
!! ATAAAATTTATAAACATAGA+GGG + chr8_1:67794930-67794949 None:intergenic 10.0%
!! GATATAAAGTAATTATAAAA+GGG + chr8_1:67795173-67795192 None:intergenic 10.0%
!! TGATATAAAGTAATTATAAA+AGG + chr8_1:67795174-67795193 None:intergenic 10.0%
!! ACCAATATAAATATAAATTT+GGG + chr8_1:67796579-67796598 None:intergenic 10.0%
!! AAATTTATATTTATATTGGT+GGG - chr8_1:67796579-67796598 Msa1209390:CDS 10.0%
!! ATATAAATATGATGAAAAGA+AGG + chr8_1:67789158-67789177 None:intergenic 15.0%
!!! AATTTATTAGATAAAGGTTT+TGG + chr8_1:67792225-67792244 None:intergenic 15.0%
!! AATCACTTATTTCAATAAAA+GGG + chr8_1:67792429-67792448 None:intergenic 15.0%
!! AAATCACTTATTTCAATAAA+AGG + chr8_1:67792430-67792449 None:intergenic 15.0%
!!! AAGTATAAATTTTAACTTTG+TGG - chr8_1:67792837-67792856 Msa1209390:intron 15.0%
!!! TTACTTTAATTTATAACGAT+GGG + chr8_1:67793136-67793155 None:intergenic 15.0%
!!! TTTACTTTAATTTATAACGA+TGG + chr8_1:67793137-67793156 None:intergenic 15.0%
!! AGCATTTAAAAATTAAAAGA+AGG - chr8_1:67793315-67793334 Msa1209390:intron 15.0%
!! TATAGGAAAGAAAATAATAA+TGG - chr8_1:67793356-67793375 Msa1209390:intron 15.0%
!! ATAGGAAAGAAAATAATAAT+GGG - chr8_1:67793357-67793376 Msa1209390:intron 15.0%
!! TACATCAAAATTATTATTTG+GGG + chr8_1:67793665-67793684 None:intergenic 15.0%
!! GTACATCAAAATTATTATTT+GGG + chr8_1:67793666-67793685 None:intergenic 15.0%
!!! TAAGTTGAATAATTGTTATT+GGG + chr8_1:67793968-67793987 None:intergenic 15.0%
!! ATGAACATAAATTTATAAGT+GGG - chr8_1:67794635-67794654 Msa1209390:intron 15.0%
!! CATAAAATTTATAAACATAG+AGG + chr8_1:67794931-67794950 None:intergenic 15.0%
!!! AAAATTTTTCAATTTTATGC+AGG - chr8_1:67795283-67795302 Msa1209390:intron 15.0%
!! TTATAATTAATAATTTCTCC+TGG - chr8_1:67795314-67795333 Msa1209390:intron 15.0%
!! TATAATTAATAATTTCTCCT+GGG - chr8_1:67795315-67795334 Msa1209390:intron 15.0%
!! TATTAGTATATATTATGCTA+AGG - chr8_1:67796496-67796515 Msa1209390:CDS 15.0%
!! ATTAGTATATATTATGCTAA+GGG - chr8_1:67796497-67796516 Msa1209390:CDS 15.0%
!! TCCCAAATTTATATTTATAT+TGG - chr8_1:67796575-67796594 Msa1209390:CDS 15.0%
!! CACCAATATAAATATAAATT+TGG + chr8_1:67796580-67796599 None:intergenic 15.0%
!! CAAATTTATATTTATATTGG+TGG - chr8_1:67796578-67796597 Msa1209390:CDS 15.0%
!! AATTTATATTTATATTGGTG+GGG - chr8_1:67796580-67796599 Msa1209390:CDS 15.0%
!!! GTAAGTTGAATAATTGTTTT+TGG + chr8_1:67788915-67788934 None:intergenic 20.0%
!! TAAATATGATCAAATGTTTC+CGG + chr8_1:67789363-67789382 None:intergenic 20.0%
!! ACATTCTACTTTATTAGAAA+TGG - chr8_1:67789579-67789598 Msa1209390:intron 20.0%
!!! AATTTAAAATCAGCATTTTC+CGG + chr8_1:67790034-67790053 None:intergenic 20.0%
!!! AAATGCTGATTTTAAATTCT+TGG - chr8_1:67790036-67790055 Msa1209390:intron 20.0%
!!! TTTTATTTCAAGCAATATCA+GGG + chr8_1:67790127-67790146 None:intergenic 20.0%
!!! ATTCTTATCACATTTTGAAT+CGG - chr8_1:67790534-67790553 Msa1209390:intron 20.0%
!! TAAAACTTAAAGAAACTCTT+GGG + chr8_1:67791160-67791179 None:intergenic 20.0%
!! ATAAAACTTAAAGAAACTCT+TGG + chr8_1:67791161-67791180 None:intergenic 20.0%
!!! TTCATATTTTTGTTTGGTAT+CGG - chr8_1:67792246-67792265 Msa1209390:intron 20.0%
!!! AAGGAATAAATTTTAACATC+TGG - chr8_1:67792276-67792295 Msa1209390:intron 20.0%
!!! AGGAATAAATTTTAACATCT+GGG - chr8_1:67792277-67792296 Msa1209390:intron 20.0%
!! GATGAATAAGAATAAAACTA+GGG + chr8_1:67792338-67792357 None:intergenic 20.0%
!! TATTTCAATAAAAGGGAAAA+AGG + chr8_1:67792422-67792441 None:intergenic 20.0%
!!! CAAATTTGCTAAAAACAAAA+AGG + chr8_1:67792750-67792769 None:intergenic 20.0%
!! TAAAGTAAAATGTAGTACTT+TGG - chr8_1:67793148-67793167 Msa1209390:intron 20.0%
!! TAGGAAAGAAAATAATAATG+GGG - chr8_1:67793358-67793377 Msa1209390:intron 20.0%
!! GGTACATCAAAATTATTATT+TGG + chr8_1:67793667-67793686 None:intergenic 20.0%
!!! TAGTTTAAAACCTTTTTTAG+AGG + chr8_1:67793688-67793707 None:intergenic 20.0%
!!! AAATCCAAATGATGATTTTA+AGG + chr8_1:67793718-67793737 None:intergenic 20.0%
!!! TAAAATCATCATTTGGATTT+TGG - chr8_1:67793718-67793737 Msa1209390:intron 20.0%
!!! GTAAGTTGAATAATTGTTAT+TGG + chr8_1:67793969-67793988 None:intergenic 20.0%
!!! TGATATTTTGTAGTTAATTC+TGG - chr8_1:67794050-67794069 Msa1209390:intron 20.0%
!! ATGATGAAGATATGATATTA+TGG - chr8_1:67794133-67794152 Msa1209390:intron 20.0%
!! TAAATATACATCTATAAGTG+AGG - chr8_1:67794438-67794457 Msa1209390:intron 20.0%
!! AAATATACATCTATAAGTGA+GGG - chr8_1:67794439-67794458 Msa1209390:intron 20.0%
!! CATGAACATAAATTTATAAG+TGG - chr8_1:67794634-67794653 Msa1209390:intron 20.0%
!! TGAACATAAATTTATAAGTG+GGG - chr8_1:67794636-67794655 Msa1209390:intron 20.0%
!! GGACACAAATATTAAAATTT+GGG + chr8_1:67794710-67794729 None:intergenic 20.0%
!! TGGACACAAATATTAAAATT+TGG + chr8_1:67794711-67794730 None:intergenic 20.0%
!! TATATTCTCTTTGATTGTTT+CGG + chr8_1:67795214-67795233 None:intergenic 20.0%
!! AATCAAAGAGAATATAAATG+TGG - chr8_1:67795218-67795237 Msa1209390:intron 20.0%
!! TGTCATAGATCTTAAATTTA+AGG - chr8_1:67795372-67795391 Msa1209390:intron 20.0%
!! GTCATAGATCTTAAATTTAA+GGG - chr8_1:67795373-67795392 Msa1209390:intron 20.0%
!!! GAGTTCTAACTATAAATATT+TGG + chr8_1:67795611-67795630 None:intergenic 20.0%
!!! TTTTCTATATAAGAGAAAAC+AGG - chr8_1:67795900-67795919 Msa1209390:CDS 20.0%
!! ATTTATATTTATATTGGTGG+GGG - chr8_1:67796581-67796600 Msa1209390:CDS 20.0%
!! CCTGTAAAAGAAAATAAAAA+TGG + chr8_1:67796765-67796784 None:intergenic 20.0%
!!! CCATTTTTATTTTCTTTTAC+AGG - chr8_1:67796762-67796781 Msa1209390:intron 20.0%
!! TATATGGTATTACTCTTAAA+AGG + chr8_1:67790818-67790837 None:intergenic 20.0%
!!! TTTCAGTTTATTGCTTTTTT+AGG - chr8_1:67797221-67797240 Msa1209390:intron 20.0%
!!! TTCAGTTTATTGCTTTTTTA+GGG - chr8_1:67797222-67797241 Msa1209390:intron 20.0%
! GGTTATCATATTATTGTTGT+TGG - chr8_1:67789448-67789467 Msa1209390:intron 25.0%
! ATAAAATTTGCAAACATGGA+GGG + chr8_1:67789542-67789561 None:intergenic 25.0%
! GTACATAAAATTTGCAAACA+TGG + chr8_1:67789546-67789565 None:intergenic 25.0%
! ACAAAATCTACACTTACTTT+AGG + chr8_1:67789740-67789759 None:intergenic 25.0%
! AAGATATTAAGTCTTTCAGT+AGG - chr8_1:67789804-67789823 Msa1209390:intron 25.0%
! TATATTCATCCTGATTGTAA+TGG + chr8_1:67789884-67789903 None:intergenic 25.0%
!! TTTTAAATTCTTGGCATTCT+TGG - chr8_1:67790045-67790064 Msa1209390:intron 25.0%
!!! CTTTTATTTCAAGCAATATC+AGG + chr8_1:67790128-67790147 None:intergenic 25.0%
! ATACTATAAACAGACAATAC+TGG + chr8_1:67790368-67790387 None:intergenic 25.0%
! GTATGAATCATAAAAATGTC+AGG + chr8_1:67790505-67790524 None:intergenic 25.0%
! ATGTGATAAGAATGTTATAG+AGG + chr8_1:67790527-67790546 None:intergenic 25.0%
!! TTCTTATCACATTTTGAATC+GGG - chr8_1:67790535-67790554 Msa1209390:intron 25.0%
! CCTGTAAAAGAAAATGAAAA+TGG + chr8_1:67790617-67790636 None:intergenic 25.0%
!! CCATTTTCATTTTCTTTTAC+AGG - chr8_1:67790614-67790633 Msa1209390:intron 25.0%
!!! CAGAGATTGAAAGTTATTTT+TGG - chr8_1:67790701-67790720 Msa1209390:three_prime_UTR 25.0%
! AGATAAGGGAATCATATTAT+TGG - chr8_1:67790773-67790792 Msa1209390:intron 25.0%
! GATAAGGGAATCATATTATT+GGG - chr8_1:67790774-67790793 Msa1209390:intron 25.0%
! TTAAGAGTAATACCATATAG+AGG - chr8_1:67790819-67790838 Msa1209390:intron 25.0%
! AAAACTTAAAGAAACTCTTG+GGG + chr8_1:67791312-67791331 None:intergenic 25.0%
! GTTCTGATTCAAAGAAAATA+TGG - chr8_1:67791597-67791616 Msa1209390:intron 25.0%
! AGTAATTGACCAATTCTATA+AGG + chr8_1:67791676-67791695 None:intergenic 25.0%
! AATTGGTCAATTACTTGATA+AGG - chr8_1:67791681-67791700 Msa1209390:intron 25.0%
! ATTGGTCAATTACTTGATAA+GGG - chr8_1:67791682-67791701 Msa1209390:intron 25.0%
! CAAAGTATACTTCATTACAT+GGG + chr8_1:67791862-67791881 None:intergenic 25.0%
! TCAAAGTATACTTCATTACA+TGG + chr8_1:67791863-67791882 None:intergenic 25.0%
! TGTAATGAAGTATACTTTGA+TGG - chr8_1:67791863-67791882 Msa1209390:intron 25.0%
!!! ATTTTTTGTAGATACTGAAC+AGG - chr8_1:67791904-67791923 Msa1209390:intron 25.0%
! TCAATTGAGAAAATCAAACA+TGG - chr8_1:67791989-67792008 Msa1209390:intron 25.0%
! CAATTGAGAAAATCAAACAT+GGG - chr8_1:67791990-67792009 Msa1209390:intron 25.0%
! TCTATTTCAATTGCACATAA+AGG - chr8_1:67792145-67792164 Msa1209390:intron 25.0%
!!! TCATATTTTTGTTTGGTATC+GGG - chr8_1:67792247-67792266 Msa1209390:intron 25.0%
!! TAAGAATAAAACTAGGGTTT+TGG + chr8_1:67792332-67792351 None:intergenic 25.0%
! GGATGAATAAGAATAAAACT+AGG + chr8_1:67792339-67792358 None:intergenic 25.0%
! TATGACTATATTCAAATCTC+CGG + chr8_1:67792658-67792677 None:intergenic 25.0%
! TTGAATATAGTCATATGTGT+AGG - chr8_1:67792663-67792682 Msa1209390:intron 25.0%
! ATCCATGTTAATAGCATAAA+CGG + chr8_1:67792702-67792721 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + chr8_1:67793028-67793047 None:intergenic 25.0%
! AGTGTGCATAGTAATAATTA+TGG - chr8_1:67793175-67793194 Msa1209390:intron 25.0%
! GTGTGCATAGTAATAATTAT+GGG - chr8_1:67793176-67793195 Msa1209390:intron 25.0%
! TGTGCATAGTAATAATTATG+GGG - chr8_1:67793177-67793196 Msa1209390:intron 25.0%
!!! TTTTGATGTACCTCTAAAAA+AGG - chr8_1:67793675-67793694 Msa1209390:intron 25.0%
!! GAATAATTGTTATTGGGATA+TGG + chr8_1:67793962-67793981 None:intergenic 25.0%
! AAACTCTCTTAACATCTAAA+AGG - chr8_1:67793995-67794014 Msa1209390:intron 25.0%
! AACTCTCTTAACATCTAAAA+GGG - chr8_1:67793996-67794015 Msa1209390:intron 25.0%
!! ATTTAGAGTTTGCTTTATTG+AGG - chr8_1:67794273-67794292 Msa1209390:intron 25.0%
! GAACATAAATTTATAAGTGG+GGG - chr8_1:67794637-67794656 Msa1209390:intron 25.0%
!!! ATCTTATAAGTTGGTATTGT+AGG - chr8_1:67794668-67794687 Msa1209390:intron 25.0%
!!! TCTTATAAGTTGGTATTGTA+GGG - chr8_1:67794669-67794688 Msa1209390:intron 25.0%
! ATGAAAGTAATCAAATGTGT+CGG + chr8_1:67794754-67794773 None:intergenic 25.0%
! CCATTTCTAATAATGTAGAA+GGG + chr8_1:67794967-67794986 None:intergenic 25.0%
! AACATCTTTAACAGATTCTT+CGG + chr8_1:67795018-67795037 None:intergenic 25.0%
! ATCTAGAAAGTCATGAATAT+AGG + chr8_1:67795057-67795076 None:intergenic 25.0%
! CACATAAATAATTATGTCAC+AGG - chr8_1:67795413-67795432 Msa1209390:intron 25.0%
!! ATGTGTTTTCTTAATTGAGA+AGG - chr8_1:67795464-67795483 Msa1209390:intron 25.0%
! TCTTAAATACTTAACGTTCT+TGG - chr8_1:67795566-67795585 Msa1209390:intron 25.0%
! TATTTATAGTTAGAACTCCA+CGG - chr8_1:67795613-67795632 Msa1209390:intron 25.0%
! CTAACATGTTTCTTTACTTT+GGG - chr8_1:67795722-67795741 Msa1209390:intron 25.0%
!! CAAATTGGTTTAAACACAAA+AGG + chr8_1:67795811-67795830 None:intergenic 25.0%
!! CTTTTGTGTTTAAACCAATT+TGG - chr8_1:67795809-67795828 Msa1209390:intron 25.0%
!!! GAAGCATATGATTTTAACAT+CGG + chr8_1:67795847-67795866 None:intergenic 25.0%
! AAAGTCAAACATAACAAGTA+GGG + chr8_1:67796009-67796028 None:intergenic 25.0%
! AAAAGTCAAACATAACAAGT+AGG + chr8_1:67796010-67796029 None:intergenic 25.0%
! TTGTTTGATGAAGTTATTCA+TGG - chr8_1:67796091-67796110 Msa1209390:intron 25.0%
! TTTATATTTATATTGGTGGG+GGG - chr8_1:67796582-67796601 Msa1209390:CDS 25.0%
! AAAAAGATTGGAGTGATATA+AGG + chr8_1:67796621-67796640 None:intergenic 25.0%
!!! CAGAGATTGAAAGTTATTTT+TGG - chr8_1:67790701-67790720 Msa1209390:three_prime_UTR 25.0%
! GACTTTCAAAGATTAATATG+TGG - chr8_1:67796928-67796947 Msa1209390:intron 25.0%
! ATAAGAAGATACAAGGAAAT+GGG + chr8_1:67797020-67797039 None:intergenic 25.0%
! AGATAGGGAAATTATATTAG+TGG - chr8_1:67797076-67797095 Msa1209390:CDS 25.0%
! GATAGGGAAATTATATTAGT+GGG - chr8_1:67797077-67797096 Msa1209390:CDS 25.0%
! AAGAGTAATACCATATATAG+AGG - chr8_1:67797124-67797143 Msa1209390:CDS 25.0%
! TTCAATATTGCCTCTATATA+TGG + chr8_1:67797137-67797156 None:intergenic 25.0%
! GAAAATTTTGCAGTTAGTTC+TGG - chr8_1:67788985-67789004 Msa1209390:three_prime_UTR 30.0%
ATGACGAAGATATGATACAA+TGG - chr8_1:67789068-67789087 Msa1209390:three_prime_UTR 30.0%
TGATAATTGGGAACAAGAAA+AGG + chr8_1:67789501-67789520 None:intergenic 30.0%
TGCTTAAGTAGGTGATAATT+GGG + chr8_1:67789513-67789532 None:intergenic 30.0%
TTGCTTAAGTAGGTGATAAT+TGG + chr8_1:67789514-67789533 None:intergenic 30.0%
CATAAAATTTGCAAACATGG+AGG + chr8_1:67789543-67789562 None:intergenic 30.0%
AGTTTGAGAGATATCTTTGA+TGG + chr8_1:67789642-67789661 None:intergenic 30.0%
! GTGTGTTTTCTTAATTGAGA+AGG - chr8_1:67789943-67789962 Msa1209390:intron 30.0%
! ATATTTGATCTGAGAGGTTT+TGG - chr8_1:67790007-67790026 Msa1209390:intron 30.0%
ATTGTCGCAAGTATTATTTG+TGG - chr8_1:67790228-67790247 Msa1209390:intron 30.0%
TGTCTGTTTATAGTATGCTA+AGG - chr8_1:67790372-67790391 Msa1209390:three_prime_UTR 30.0%
GTCTGTTTATAGTATGCTAA+GGG - chr8_1:67790373-67790392 Msa1209390:three_prime_UTR 30.0%
CACCAATGTAACACATTAAT+CGG + chr8_1:67790469-67790488 None:intergenic 30.0%
GATTAATGTGTTACATTGGT+GGG - chr8_1:67790468-67790487 Msa1209390:intron 30.0%
CAAAAATCAAACGATCATGT+AGG - chr8_1:67790560-67790579 Msa1209390:intron 30.0%
!! AACTTTCAATCTCTGAAGTT+TGG + chr8_1:67790696-67790715 None:intergenic 30.0%
TATGAAAATTGCTGTCATTG+AGG - chr8_1:67790728-67790747 Msa1209390:three_prime_UTR 30.0%
ATACCATATAGAGGCAATAT+TGG - chr8_1:67790828-67790847 Msa1209390:intron 30.0%
AAATACCTCTTGTATAAGTG+TGG - chr8_1:67790977-67790996 Msa1209390:intron 30.0%
TGTATAAGTGTGGTACAAAA+TGG - chr8_1:67790987-67791006 Msa1209390:intron 30.0%
GTTATACATTGAATACACAC+TGG + chr8_1:67791038-67791057 None:intergenic 30.0%
ACTCAATTGGATCAATTTAG+GGG + chr8_1:67791184-67791203 None:intergenic 30.0%
CACTCAATTGGATCAATTTA+GGG + chr8_1:67791185-67791204 None:intergenic 30.0%
TCACTCAATTGGATCAATTT+AGG + chr8_1:67791186-67791205 None:intergenic 30.0%
AACAGTGATATCAGAGTTAT+TGG - chr8_1:67791251-67791270 Msa1209390:intron 30.0%
AAACTTAAAGAAACTCTTGG+GGG + chr8_1:67791311-67791330 None:intergenic 30.0%
!! TCAGAAGTATTGTTTGTTCT+TGG - chr8_1:67791638-67791657 Msa1209390:intron 30.0%
!! CAGAAGTATTGTTTGTTCTT+GGG - chr8_1:67791639-67791658 Msa1209390:intron 30.0%
AAACAACTCAAAGTGTATGA+TGG - chr8_1:67791727-67791746 Msa1209390:intron 30.0%
ACCTATGCCAATAAGAAATT+AGG - chr8_1:67791774-67791793 Msa1209390:intron 30.0%
CCTATGCCAATAAGAAATTA+GGG - chr8_1:67791775-67791794 Msa1209390:intron 30.0%
ATAGCTCCCTAATTTCTTAT+TGG + chr8_1:67791784-67791803 None:intergenic 30.0%
TTAAGTCTTGCCTTGTATTT+GGG + chr8_1:67792099-67792118 None:intergenic 30.0%
TTTAAGTCTTGCCTTGTATT+TGG + chr8_1:67792100-67792119 None:intergenic 30.0%
AATACAAGGCAAGACTTAAA+AGG - chr8_1:67792100-67792119 Msa1209390:three_prime_UTR 30.0%
CAAGACTTAAAAGGTCATAT+CGG - chr8_1:67792109-67792128 Msa1209390:three_prime_UTR 30.0%
TTCTTATTCATCCAACAAAG+AGG - chr8_1:67792346-67792365 Msa1209390:three_prime_UTR 30.0%
TCTTATTCATCCAACAAAGA+GGG - chr8_1:67792347-67792366 Msa1209390:three_prime_UTR 30.0%
AAAAAGGAAAACGAGTTAGA+GGG + chr8_1:67792406-67792425 None:intergenic 30.0%
! AACTTTGTGGTAAGTCTTAT+TGG - chr8_1:67792850-67792869 Msa1209390:intron 30.0%
! GTTTTTCTTAACTGTTCTCA+GGG + chr8_1:67792946-67792965 None:intergenic 30.0%
AAATAGCCTTTGTTAACTAC+TGG - chr8_1:67793103-67793122 Msa1209390:intron 30.0%
!! TAATAATTATGGGGTACTGT+TGG - chr8_1:67793186-67793205 Msa1209390:intron 30.0%
!! AATAATTATGGGGTACTGTT+GGG - chr8_1:67793187-67793206 Msa1209390:intron 30.0%
AATAGTGCATTGAAAACTGA+AGG - chr8_1:67793221-67793240 Msa1209390:intron 30.0%
!!! AAACGACGCTTATTTTGAAA+AGG - chr8_1:67793277-67793296 Msa1209390:intron 30.0%
ACGACCTTAAAATCATCATT+TGG - chr8_1:67793711-67793730 Msa1209390:intron 30.0%
AGACACTTAACAACAAACAT+TGG + chr8_1:67794397-67794416 None:intergenic 30.0%
CTAACTCAACCAAACAATAT+CGG + chr8_1:67794483-67794502 None:intergenic 30.0%
! ACCATGATAAAGTTTGAGTT+GGG + chr8_1:67794507-67794526 None:intergenic 30.0%
TACCATGATAAAGTTTGAGT+TGG + chr8_1:67794508-67794527 None:intergenic 30.0%
AAAGACTATTCAAGATCCAT+TGG - chr8_1:67794530-67794549 Msa1209390:intron 30.0%
AAGACTATTCAAGATCCATT+GGG - chr8_1:67794531-67794550 Msa1209390:intron 30.0%
CAATACCAACTTATAAGATG+AGG + chr8_1:67794667-67794686 None:intergenic 30.0%
TATAACCGATCTCTATGTAT+CGG - chr8_1:67794781-67794800 Msa1209390:intron 30.0%
ATTTATAAACATAGAGGGTC+TGG + chr8_1:67794925-67794944 None:intergenic 30.0%
CCCTTCTACATTATTAGAAA+TGG - chr8_1:67794964-67794983 Msa1209390:intron 30.0%
GCCATTTCTAATAATGTAGA+AGG + chr8_1:67794968-67794987 None:intergenic 30.0%
TTTCCTAAAGTAAGTGTAGA+AGG - chr8_1:67789734-67789753 Msa1209390:intron 30.0%
TAACCTTCTACACTTACTTT+AGG + chr8_1:67795125-67795144 None:intergenic 30.0%
ATGAAACCAAAACTTTCTCT+AGG - chr8_1:67795249-67795268 Msa1209390:intron 30.0%
! ATATTTGATCTCAGAGGTTT+TGG - chr8_1:67795528-67795547 Msa1209390:intron 30.0%
ATTACCTTGCTGGAAATAAA+TGG - chr8_1:67795672-67795691 Msa1209390:intron 30.0%
CCAAAGTAAAGAAACATGTT+AGG + chr8_1:67795724-67795743 None:intergenic 30.0%
CCTAACATGTTTCTTTACTT+TGG - chr8_1:67795721-67795740 Msa1209390:intron 30.0%
!! ATATGATTTTAACATCGGCT+TGG + chr8_1:67795842-67795861 None:intergenic 30.0%
GTTAAAATCATATGCTTCTC+TGG - chr8_1:67795849-67795868 Msa1209390:intron 30.0%
! GACTTTTGCGTTTTTAATCA+TGG - chr8_1:67796023-67796042 Msa1209390:intron 30.0%
CAAGTATACTCAAGATATTG+AGG - chr8_1:67796051-67796070 Msa1209390:intron 30.0%
AGATATTGAGGTTGTTAAGA+TGG - chr8_1:67796063-67796082 Msa1209390:intron 30.0%
AGTATATATTATGCTAAGGG+TGG - chr8_1:67796500-67796519 Msa1209390:CDS 30.0%
GTATATATTATGCTAAGGGT+GGG - chr8_1:67796501-67796520 Msa1209390:CDS 30.0%
TATATATTATGCTAAGGGTG+GGG - chr8_1:67796502-67796521 Msa1209390:CDS 30.0%
GGGATATAAAGTTAACTTAG+TGG + chr8_1:67796559-67796578 None:intergenic 30.0%
! TCACCTTATAACTCCTATTT+TGG - chr8_1:67796663-67796682 Msa1209390:intron 30.0%
ATGCCAAAATAGGAGTTATA+AGG + chr8_1:67796669-67796688 None:intergenic 30.0%
CAACAATCTTATGCCAAAAT+AGG + chr8_1:67796679-67796698 None:intergenic 30.0%
!!! CTATTTTGGCATAAGATTGT+TGG - chr8_1:67796677-67796696 Msa1209390:intron 30.0%
!! AACTTTCAATCTCTGAAGTT+TGG + chr8_1:67790696-67790715 None:intergenic 30.0%
! AGACTGTTTTGCATTTATCT+TGG - chr8_1:67796906-67796925 Msa1209390:intron 30.0%
CAAAGATTAATATGTGGATC+TGG - chr8_1:67796934-67796953 Msa1209390:intron 30.0%
! CAACTCATAAGAATTTTGAG+AGG - chr8_1:67796963-67796982 Msa1209390:intron 30.0%
CATAAGAAGATACAAGGAAA+TGG + chr8_1:67797021-67797040 None:intergenic 30.0%
AAAATACTTGCTCCTCATAT+CGG + chr8_1:67797204-67797223 None:intergenic 30.0%
AACAGTATCTCTTGTATAAC+TGG - chr8_1:67797267-67797286 Msa1209390:intron 30.0%
GAAATTGTTGAAGAAAGACG+AGG + chr8_1:67788776-67788795 None:intergenic 35.0%
! AACTACGAATTTGGTTCGAA+GGG + chr8_1:67788798-67788817 None:intergenic 35.0%
TTCGAACCAAATTCGTAGTT+CGG - chr8_1:67788798-67788817 Msa1209390:three_prime_UTR 35.0%
! AGAACCTTTTGTGAGTCATT+GGG + chr8_1:67788851-67788870 None:intergenic 35.0%
! AAGAACCTTTTGTGAGTCAT+TGG + chr8_1:67788852-67788871 None:intergenic 35.0%
GAATACTATAGTCTTCCTGT+TGG - chr8_1:67789031-67789050 Msa1209390:three_prime_UTR 35.0%
TAATTGGGAACAAGAAAAGG+TGG + chr8_1:67789498-67789517 None:intergenic 35.0%
TGAACATGTCCATTACAATC+AGG - chr8_1:67789872-67789891 Msa1209390:intron 35.0%
AGGATGAATATATATGCCAC+AGG - chr8_1:67789892-67789911 Msa1209390:intron 35.0%
AATATATATGCCACAGGAAC+AGG - chr8_1:67789898-67789917 Msa1209390:intron 35.0%
CTTGCAATATTTGATCTGAG+AGG - chr8_1:67790001-67790020 Msa1209390:intron 35.0%
AATACTTGCGACAATCGATT+AGG + chr8_1:67790223-67790242 None:intergenic 35.0%
TGTTTATAGTATGCTAAGGG+TGG - chr8_1:67790376-67790395 Msa1209390:three_prime_UTR 35.0%
GTGAAGTAATAAAGAGATCG+AGG + chr8_1:67790411-67790430 None:intergenic 35.0%
CTCCGATTAATGTGTTACAT+TGG - chr8_1:67790464-67790483 Msa1209390:intron 35.0%
CGATTAATGTGTTACATTGG+TGG - chr8_1:67790467-67790486 Msa1209390:intron 35.0%
!! TTTCAATCTCTGAAGTTTGG+TGG + chr8_1:67790693-67790712 None:intergenic 35.0%
GAGGAATCAAAGAAGAACTA+TGG - chr8_1:67790747-67790766 Msa1209390:three_prime_UTR 35.0%
GAATCAAAGAAGAACTATGG+TGG - chr8_1:67790750-67790769 Msa1209390:three_prime_UTR 35.0%
! AAGAACTATGGTGGAGATAA+GGG - chr8_1:67790759-67790778 Msa1209390:three_prime_UTR 35.0%
TCTCCAATATTGCCTCTATA+TGG + chr8_1:67790834-67790853 None:intergenic 35.0%
TTGTACCACACTTATACAAG+AGG + chr8_1:67790985-67791004 None:intergenic 35.0%
TCACTCAATTGGATCAACTT+AGG + chr8_1:67791339-67791358 None:intergenic 35.0%
TTGGAGTTAGGTCAAATTTG+TGG - chr8_1:67791435-67791454 Msa1209390:intron 35.0%
! ACAAATTTTCCTTCCAGTCA+TGG + chr8_1:67791494-67791513 None:intergenic 35.0%
! TCACTTACTGAAGAAAGTGT+TGG - chr8_1:67791570-67791589 Msa1209390:intron 35.0%
GAAGTGTGACCTTATAGAAT+TGG - chr8_1:67791664-67791683 Msa1209390:intron 35.0%
CCCTAATTTCTTATTGGCAT+AGG + chr8_1:67791778-67791797 None:intergenic 35.0%
!! AAGGTGGATTAATGCTATGA+AGG - chr8_1:67791955-67791974 Msa1209390:intron 35.0%
! AGAAAGTGATTTGTGTGAAG+TGG - chr8_1:67792037-67792056 Msa1209390:three_prime_UTR 35.0%
!! TAAAACTAGGGTTTTGGTGA+CGG + chr8_1:67792326-67792345 None:intergenic 35.0%
CTTATTCATCCAACAAAGAG+GGG - chr8_1:67792348-67792367 Msa1209390:three_prime_UTR 35.0%
AAAAGGAAAACGAGTTAGAG+GGG + chr8_1:67792405-67792424 None:intergenic 35.0%
GAAAAAGGAAAACGAGTTAG+AGG + chr8_1:67792407-67792426 None:intergenic 35.0%
! TTGTCTTTCTTGTTTCTCTC+AGG - chr8_1:67792532-67792551 Msa1209390:intron 35.0%
GTTTCTCTCAGGTATTTGAT+CGG - chr8_1:67792543-67792562 Msa1209390:intron 35.0%
ATGACGCAAAAGTCATTGAT+TGG + chr8_1:67792605-67792624 None:intergenic 35.0%
! TGCCGTTTATGCTATTAACA+TGG - chr8_1:67792697-67792716 Msa1209390:intron 35.0%
TGAATTTGTGAACAGACTCA+CGG + chr8_1:67792726-67792745 None:intergenic 35.0%
! CATCCAACCTCTAATTTTGA+CGG - chr8_1:67792913-67792932 Msa1209390:intron 35.0%
AAAATGGCCGTCAAAATTAG+AGG + chr8_1:67792923-67792942 None:intergenic 35.0%
TTAACTGTTCTCAGGGAAAA+TGG + chr8_1:67792939-67792958 None:intergenic 35.0%
! CGTTTTTCTTAACTGTTCTC+AGG + chr8_1:67792947-67792966 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+AGG + chr8_1:67793024-67793043 None:intergenic 35.0%
AATGCACCAGTAGTTAACAA+AGG + chr8_1:67793112-67793131 None:intergenic 35.0%
!!! GACGCTTATTTTGAAAAGGA+GGG - chr8_1:67793281-67793300 Msa1209390:intron 35.0%
! TAGTCACTTTAGTCCTTGAA+TGG - chr8_1:67793384-67793403 Msa1209390:intron 35.0%
! AGTCACTTTAGTCCTTGAAT+GGG - chr8_1:67793385-67793404 Msa1209390:intron 35.0%
TTGCAATTTCTCTGCATTCA+GGG + chr8_1:67793431-67793450 None:intergenic 35.0%
TTTGCAATTTCTCTGCATTC+AGG + chr8_1:67793432-67793451 None:intergenic 35.0%
AGAAATTGCAAAAAAGTCCC+TGG - chr8_1:67793440-67793459 Msa1209390:intron 35.0%
ACTAACAGAGTTTACATCCA+GGG + chr8_1:67793460-67793479 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG + chr8_1:67793507-67793526 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG + chr8_1:67793524-67793543 None:intergenic 35.0%
GACTCTGTTACTCAATTTCA+GGG + chr8_1:67793556-67793575 None:intergenic 35.0%
AGACTCTGTTACTCAATTTC+AGG + chr8_1:67793557-67793576 None:intergenic 35.0%
TTTGCAATTTCTCTGCAATC+AGG - chr8_1:67793591-67793610 Msa1209390:intron 35.0%
TTGCAATTTCTCTGCAATCA+GGG - chr8_1:67793592-67793611 Msa1209390:intron 35.0%
GAAGAGAAGACTGAATTGAA+TGG - chr8_1:67793781-67793800 Msa1209390:intron 35.0%
!! AACCACAAACTTGGTTCTAA+GGG + chr8_1:67793858-67793877 None:intergenic 35.0%
! GTAGTTAATTCTGGAAGTGA+AGG - chr8_1:67794059-67794078 Msa1209390:intron 35.0%
!! TACAATGGCTTTAGTCAACT+TGG + chr8_1:67794199-67794218 None:intergenic 35.0%
TGATGAGAAGAAGGATACAA+TGG + chr8_1:67794214-67794233 None:intergenic 35.0%
! TAGAGTTTGCTTTATTGAGG+AGG - chr8_1:67794276-67794295 Msa1209390:intron 35.0%
ACTGGGAAATGAGTGAAAAT+TGG - chr8_1:67794303-67794322 Msa1209390:intron 35.0%
!!! GCATCAATTTTTAAGACCGA+AGG - chr8_1:67794366-67794385 Msa1209390:intron 35.0%
TGTTGTTAAGTGTCTCACTT+TGG - chr8_1:67794402-67794421 Msa1209390:intron 35.0%
ACCCAACTCAAACTTTATCA+TGG - chr8_1:67794503-67794522 Msa1209390:intron 35.0%
GCAATCCTCATCTTATAAGT+TGG - chr8_1:67794659-67794678 Msa1209390:intron 35.0%
TGTAGTGTAACTCGTGTTAA+TGG + chr8_1:67794731-67794750 None:intergenic 35.0%
ACATAGAGATCGGTTATACA+AGG + chr8_1:67794779-67794798 None:intergenic 35.0%
ACATACCGATACATAGAGAT+CGG + chr8_1:67794789-67794808 None:intergenic 35.0%
GTTAAAGATGTTGCTCAAAC+CGG - chr8_1:67795026-67795045 Msa1209390:intron 35.0%
! GTCATGAATATAGGCTTTTC+CGG + chr8_1:67795048-67795067 None:intergenic 35.0%
! CCTTTACCTAGAGAAAGTTT+TGG + chr8_1:67795258-67795277 None:intergenic 35.0%
CCAAAACTTTCTCTAGGTAA+AGG - chr8_1:67795255-67795274 Msa1209390:intron 35.0%
TTAAGATCTATGACACACAC+TGG + chr8_1:67795367-67795386 None:intergenic 35.0%
AATAATTATGTCACAGGCAC+AGG - chr8_1:67795419-67795438 Msa1209390:intron 35.0%
CTTGGAATATTTGATCTCAG+AGG - chr8_1:67795522-67795541 Msa1209390:intron 35.0%
ACTGTCTCAAGTACTATTTG+CGG - chr8_1:67795780-67795799 Msa1209390:intron 35.0%
AAGTGTGGCTTATATATGTC+TGG - chr8_1:67795942-67795961 Msa1209390:CDS 35.0%
! TTGCGTTTTTAATCATGGCA+TGG - chr8_1:67796028-67796047 Msa1209390:intron 35.0%
TATTCAAATCGAGACGTCAT+TGG - chr8_1:67796118-67796137 Msa1209390:intron 35.0%
ATTCAAATCGAGACGTCATT+GGG - chr8_1:67796119-67796138 Msa1209390:intron 35.0%
AATTCACAAGGTGAATGGTA+TGG + chr8_1:67796205-67796224 None:intergenic 35.0%
ACTTGAACCTCAAATTCACA+AGG + chr8_1:67796217-67796236 None:intergenic 35.0%
!! TAAGGTGAATGAGTTGGTTT+GGG + chr8_1:67796651-67796670 None:intergenic 35.0%
!! ATAAGGTGAATGAGTTGGTT+TGG + chr8_1:67796652-67796671 None:intergenic 35.0%
GAGTTATAAGGTGAATGAGT+TGG + chr8_1:67796657-67796676 None:intergenic 35.0%
! ATTTTCAGCACTGTTTGACA+TGG - chr8_1:67796734-67796753 Msa1209390:intron 35.0%
!! TTTCAATCTCTGAAGTTTGG+TGG + chr8_1:67790693-67790712 None:intergenic 35.0%
TTGAAGAACCATGCTTGTAT+AGG - chr8_1:67796991-67797010 Msa1209390:intron 35.0%
ACTAGGCATAAGAAGATACA+AGG + chr8_1:67797027-67797046 None:intergenic 35.0%
TCTTCTTATGCCTAGTATGT+AGG - chr8_1:67797031-67797050 Msa1209390:intron 35.0%
CTCTTTGATTCCTACATACT+AGG + chr8_1:67797044-67797063 None:intergenic 35.0%
CTAGTATGTAGGAATCAAAG+AGG - chr8_1:67797042-67797061 Msa1209390:intron 35.0%
GTAGGAATCAAAGAGGAATT+AGG - chr8_1:67797049-67797068 Msa1209390:intron 35.0%
TGTTTATGTGATCCGATATG+AGG - chr8_1:67797189-67797208 Msa1209390:CDS 35.0%
CTTGTATAACTGGTGCAAAA+TGG - chr8_1:67797277-67797296 Msa1209390:intron 35.0%
ACTTGCACTGGAATGATTTA+AGG + chr8_1:67797332-67797351 None:intergenic 35.0%
TCCAGTGCAAGTACAAAATT+TGG - chr8_1:67797340-67797359 Msa1209390:intron 35.0%
! GAACTACGAATTTGGTTCGA+AGG + chr8_1:67788799-67788818 None:intergenic 40.0%
TCAACCCAATGACTCACAAA+AGG - chr8_1:67788844-67788863 Msa1209390:three_prime_UTR 40.0%
!! TAGTTCTGGAAGTGAAAGAG+AGG - chr8_1:67788999-67789018 Msa1209390:three_prime_UTR 40.0%
! AGTCTTCCTGTTGGTAGAAA+TGG - chr8_1:67789040-67789059 Msa1209390:three_prime_UTR 40.0%
! TTCCTGTTGGTAGAAATGGT+AGG - chr8_1:67789044-67789063 Msa1209390:three_prime_UTR 40.0%
! TCCTGTTGGTAGAAATGGTA+GGG - chr8_1:67789045-67789064 Msa1209390:three_prime_UTR 40.0%
TGATCAAATGTTTCCGGTGT+TGG + chr8_1:67789357-67789376 None:intergenic 40.0%
ATTTGCAAACATGGAGGGTT+TGG + chr8_1:67789537-67789556 None:intergenic 40.0%
! GAAATGGCGTCAAGATTTTG+AGG - chr8_1:67789595-67789614 Msa1209390:intron 40.0%
TAGACATAGATTGTGCTGAG+TGG + chr8_1:67789832-67789851 None:intergenic 40.0%
ACAACCTTTGATCATCTGCA+GGG + chr8_1:67789925-67789944 None:intergenic 40.0%
CAAAATGGCTTAAACACAGC+AGG + chr8_1:67790259-67790278 None:intergenic 40.0%
! CTGCTGTGTTTAAGCCATTT+TGG - chr8_1:67790257-67790276 Msa1209390:intron 40.0%
!! CTGTGTTTAAGCCATTTTGG+CGG - chr8_1:67790260-67790279 Msa1209390:intron 40.0%
TTCTTCATAAGCCGCCAAAA+TGG + chr8_1:67790274-67790293 None:intergenic 40.0%
GTTAAAATCACATGCGTCTC+AGG - chr8_1:67790297-67790316 Msa1209390:intron 40.0%
!! TCAGCCTTGTTTGACATGAT+TGG - chr8_1:67790590-67790609 Msa1209390:intron 40.0%
TGGACCAATCATGTCAAACA+AGG + chr8_1:67790597-67790616 None:intergenic 40.0%
! GAAGAACTATGGTGGAGATA+AGG - chr8_1:67790758-67790777 Msa1209390:three_prime_UTR 40.0%
GAGAGTCAAATTCATGTACC+TGG - chr8_1:67790850-67790869 Msa1209390:intron 40.0%
ACACATTACACATGTCTTCC+AGG + chr8_1:67790871-67790890 None:intergenic 40.0%
TGTTTACGCGATCTAGTCTA+AGG - chr8_1:67790891-67790910 Msa1209390:intron 40.0%
!! AGAGTTATTGGTTCCGATCA+TGG - chr8_1:67791263-67791282 Msa1209390:intron 40.0%
TTTGATCGAGATGCCATGAT+CGG + chr8_1:67791279-67791298 None:intergenic 40.0%
ATCATGGCATCTCGATCAAA+TGG - chr8_1:67791279-67791298 Msa1209390:intron 40.0%
TGGTCTCAAACTCACTCAAT+TGG + chr8_1:67791350-67791369 None:intergenic 40.0%
CTTCATATGCAAGCTTCGAT+TGG + chr8_1:67791370-67791389 None:intergenic 40.0%
CACAAAAACTGTGATGCTGA+TGG - chr8_1:67791397-67791416 Msa1209390:intron 40.0%
ATGGTAACCTCAAAAGACGT+TGG - chr8_1:67791416-67791435 Msa1209390:intron 40.0%
!!! CACTTTGAGTTGTTTTCCCT+CGG + chr8_1:67791722-67791741 None:intergenic 40.0%
TAGGGAGCTATAACATCTCA+AGG - chr8_1:67791793-67791812 Msa1209390:intron 40.0%
GACAAAAACTTCAGCCTCAA+AGG - chr8_1:67791815-67791834 Msa1209390:intron 40.0%
CACATTCTTTGTAGCCTTTG+AGG + chr8_1:67791832-67791851 None:intergenic 40.0%
! TGATGGTGAAGTAGTGCATT+TGG - chr8_1:67791880-67791899 Msa1209390:intron 40.0%
AATGTGCCATGAAAGACTCA+AGG - chr8_1:67791936-67791955 Msa1209390:intron 40.0%
AATCCACCTTGAGTCTTTCA+TGG + chr8_1:67791945-67791964 None:intergenic 40.0%
AAAGTGAAGCAGAATCCAAG+TGG - chr8_1:67792066-67792085 Msa1209390:three_prime_UTR 40.0%
! GTTTGGTATCGGGTAATCAA+AGG - chr8_1:67792257-67792276 Msa1209390:intron 40.0%
CAACAAAGAGGGGTGATTTA+GGG - chr8_1:67792358-67792377 Msa1209390:three_prime_UTR 40.0%
!!! CGACGCTTATTTTGAAAAGG+AGG - chr8_1:67793280-67793299 Msa1209390:intron 40.0%
GACTAACAGAGTTTACATCC+AGG + chr8_1:67793461-67793480 None:intergenic 40.0%
ACTAACGGAGTCTGCATTTA+GGG + chr8_1:67793492-67793511 None:intergenic 40.0%
GACTAACGAAGTCTACATTC+AGG + chr8_1:67793525-67793544 None:intergenic 40.0%
TGAGTAACAGAGTCTACTTC+AGG - chr8_1:67793562-67793581 Msa1209390:intron 40.0%
GAGTAACAGAGTCTACTTCA+GGG - chr8_1:67793563-67793582 Msa1209390:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr8_1:67793638-67793657 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr8_1:67793540-67793559 None:intergenic 40.0%
!!! TGGATTTTGGAGCATAGATG+CGG - chr8_1:67793731-67793750 Msa1209390:intron 40.0%
ATCCCTTAGAACCAAGTTTG+TGG - chr8_1:67793853-67793872 Msa1209390:intron 40.0%
!! GAACCACAAACTTGGTTCTA+AGG + chr8_1:67793859-67793878 None:intergenic 40.0%
! TGGATTGCATTTGGAGTTGA+AGG + chr8_1:67793895-67793914 None:intergenic 40.0%
GTGAGTCATTGGATTGCATT+TGG + chr8_1:67793904-67793923 None:intergenic 40.0%
GAATACTATAGTCTTCCCGT+TGG - chr8_1:67794096-67794115 Msa1209390:intron 40.0%
ATCCCTACCATTTCTACCAA+CGG + chr8_1:67789050-67789069 None:intergenic 40.0%
! AGTTTGCTTTATTGAGGAGG+TGG - chr8_1:67794279-67794298 Msa1209390:intron 40.0%
TTTATTGAGGAGGTGGAACT+GGG - chr8_1:67794286-67794305 Msa1209390:intron 40.0%
ACAAACATTGGACATGCCTT+CGG + chr8_1:67794385-67794404 None:intergenic 40.0%
!! AATATCGGCTTGTAAGGTGA+GGG + chr8_1:67794468-67794487 None:intergenic 40.0%
!! CCAAACAATATCGGCTTGTA+AGG + chr8_1:67794474-67794493 None:intergenic 40.0%
CCTTACAAGCCGATATTGTT+TGG - chr8_1:67794471-67794490 Msa1209390:intron 40.0%
TGGTATTGTAGGGTTGAGTT+AGG - chr8_1:67794679-67794698 Msa1209390:intron 40.0%
GATCTGTCTCACTGAATCAT+AGG - chr8_1:67794818-67794837 Msa1209390:intron 40.0%
ATAAACATAGAGGGTCTGGT+TGG + chr8_1:67794921-67794940 None:intergenic 40.0%
! GAAATGGCGTCAAGATTTTG+AGG - chr8_1:67789595-67789614 Msa1209390:intron 40.0%
ACTTTCTCTAGGTAAAGGAC+AGG - chr8_1:67795260-67795279 Msa1209390:intron 40.0%
CATTGAGTAAGCTTCCAACT+GGG - chr8_1:67795487-67795506 Msa1209390:intron 40.0%
AGTATCTGTTCTTTCCCAGT+TGG + chr8_1:67795504-67795523 None:intergenic 40.0%
ACTGGGAAAGAACAGATACT+TGG - chr8_1:67795504-67795523 Msa1209390:intron 40.0%
TTATAGTTAGAACTCCACGG+TGG - chr8_1:67795616-67795635 Msa1209390:intron 40.0%
CATGAACTACATTACCTTGC+TGG - chr8_1:67795662-67795681 Msa1209390:intron 40.0%
GGAACCATTTATTTCCAGCA+AGG + chr8_1:67795679-67795698 None:intergenic 40.0%
AAGCCACACTTCAGTACAAA+GGG + chr8_1:67795933-67795952 None:intergenic 40.0%
TAAGCCACACTTCAGTACAA+AGG + chr8_1:67795934-67795953 None:intergenic 40.0%
TTCAAATCGAGACGTCATTG+GGG - chr8_1:67796120-67796139 Msa1209390:intron 40.0%
! ATGGTTGGCTACCAACATTA+GGG + chr8_1:67796186-67796205 None:intergenic 40.0%
! TATGGTTGGCTACCAACATT+AGG + chr8_1:67796187-67796206 None:intergenic 40.0%
CCTCAAATTCACAAGGTGAA+TGG + chr8_1:67796210-67796229 None:intergenic 40.0%
CCATTCACCTTGTGAATTTG+AGG - chr8_1:67796207-67796226 Msa1209390:CDS 40.0%
AGAACCTCCCTATTAAGATC+AGG - chr8_1:67796240-67796259 Msa1209390:CDS 40.0%
GGAACCACCTGATCTTAATA+GGG + chr8_1:67796250-67796269 None:intergenic 40.0%
TGGAACCACCTGATCTTAAT+AGG + chr8_1:67796251-67796270 None:intergenic 40.0%
! TCTAGCTCACATGATGATTC+TGG + chr8_1:67796276-67796295 None:intergenic 40.0%
! CACGAGTTCCTCTTTTCTTT+GGG - chr8_1:67796309-67796328 Msa1209390:intron 40.0%
!! AGTTCCTCTTTTCTTTGGGA+TGG - chr8_1:67796313-67796332 Msa1209390:intron 40.0%
TGGTTCGAGTGAAAGAGTTA+AGG + chr8_1:67796539-67796558 None:intergenic 40.0%
TTGGGGGAGAGAAAAAAGAT+TGG + chr8_1:67796633-67796652 None:intergenic 40.0%
!! AAGGTGAATGAGTTGGTTTG+GGG + chr8_1:67796650-67796669 None:intergenic 40.0%
! AAGATTTTGCTCTGCAGAGA+CGG - chr8_1:67796786-67796805 Msa1209390:intron 40.0%
GAATCAAAGAGGAATTAGGC+AGG - chr8_1:67797053-67797072 Msa1209390:intron 40.0%
AAGAACCAAATTCGTCTGCT+TGG - chr8_1:67797155-67797174 Msa1209390:CDS 40.0%
! GCCAAATTTTGTACTTGCAC+TGG + chr8_1:67797344-67797363 None:intergenic 40.0%
TGGCTGTTACTATGATTCAG+AGG - chr8_1:67797360-67797379 Msa1209390:CDS 40.0%
! CTATGATTCAGAGGAGTACA+CGG - chr8_1:67797369-67797388 Msa1209390:CDS 40.0%
ATTTCTCTTGTTCGCGAGTA+TGG - chr8_1:67797399-67797418 Msa1209390:CDS 40.0%
TGAAGAAAGACGAGGAAGAG+TGG + chr8_1:67788768-67788787 None:intergenic 45.0%
!! GTGAGTCATTGGGTTGACTT+TGG + chr8_1:67788841-67788860 None:intergenic 45.0%
TCCCTACCATTTCTACCAAC+AGG + chr8_1:67789049-67789068 None:intergenic 45.0%
ACGCCTTTGGACAGAAATGT+CGG + chr8_1:67789290-67789309 None:intergenic 45.0%
TCATTGTTTGCGTCGTGTCA+AGG - chr8_1:67789418-67789437 Msa1209390:intron 45.0%
! GAGGGTTTGGTTGCTTAAGT+AGG + chr8_1:67789524-67789543 None:intergenic 45.0%
CACAACCTTTGATCATCTGC+AGG + chr8_1:67789926-67789945 None:intergenic 45.0%
CATTGAGTAAGCTTCCCACT+GGG - chr8_1:67789966-67789985 Msa1209390:intron 45.0%
ATTGAGTAAGCTTCCCACTG+GGG - chr8_1:67789967-67789986 Msa1209390:intron 45.0%
AGTATTTCCTCTTCCCCAGT+GGG + chr8_1:67789983-67790002 None:intergenic 45.0%
AAGTATTTCCTCTTCCCCAG+TGG + chr8_1:67789984-67790003 None:intergenic 45.0%
!! TGATCTGAGAGGTTTTGGTC+CGG - chr8_1:67790012-67790031 Msa1209390:intron 45.0%
TGTTACATTGGTGGGAGAGT+TGG - chr8_1:67790476-67790495 Msa1209390:intron 45.0%
TTGCTCTGCAGAAACTCTCA+AGG - chr8_1:67790644-67790663 Msa1209390:three_prime_UTR 45.0%
TTACGCGATCTAGTCTAAGG+AGG - chr8_1:67790894-67790913 Msa1209390:intron 45.0%
CTCACACACACTCACTCAAT+TGG + chr8_1:67791197-67791216 None:intergenic 45.0%
! CCTAACTCCAACGTCTTTTG+AGG + chr8_1:67791426-67791445 None:intergenic 45.0%
CCTCAAAAGACGTTGGAGTT+AGG - chr8_1:67791423-67791442 Msa1209390:intron 45.0%
TACAGTCTACACACCATGAC+TGG - chr8_1:67791478-67791497 Msa1209390:intron 45.0%
GGTTACAAGATGATCACCGA+GGG - chr8_1:67791703-67791722 Msa1209390:intron 45.0%
TATTTGGGCACTCATCCACT+TGG + chr8_1:67792084-67792103 None:intergenic 45.0%
TGGATGAGTGCCCAAATACA+AGG - chr8_1:67792086-67792105 Msa1209390:three_prime_UTR 45.0%
CCTAAATCACCCCTCTTTGT+TGG + chr8_1:67792360-67792379 None:intergenic 45.0%
CCAACAAAGAGGGGTGATTT+AGG - chr8_1:67792357-67792376 Msa1209390:three_prime_UTR 45.0%
! CGAGTTAGAGGGGTGATTTT+GGG + chr8_1:67792395-67792414 None:intergenic 45.0%
! ACGAGTTAGAGGGGTGATTT+TGG + chr8_1:67792396-67792415 None:intergenic 45.0%
GTTTGTTCGTCGTCTTTGTG+CGG - chr8_1:67792503-67792522 Msa1209390:intron 45.0%
! GTCATTGATTGGATCTGCAC+TGG + chr8_1:67792594-67792613 None:intergenic 45.0%
! ATCCGAAGGCATGGTTATTC+CGG - chr8_1:67792636-67792655 Msa1209390:intron 45.0%
TGGCCGTCAAAATTAGAGGT+TGG + chr8_1:67792919-67792938 None:intergenic 45.0%
GACGAATCGTTTCCCATTCA+AGG + chr8_1:67793400-67793419 None:intergenic 45.0%
GACTAACGGAGTCTGCATTT+AGG + chr8_1:67793493-67793512 None:intergenic 45.0%
TGACTACTCCTTTCCCATTC+AGG - chr8_1:67793622-67793641 Msa1209390:intron 45.0%
GACTACTCCTTTCCCATTCA+GGG - chr8_1:67793623-67793642 Msa1209390:intron 45.0%
CTTTAGTCCCTGAATGGGAA+AGG + chr8_1:67793633-67793652 None:intergenic 45.0%
!!! ATTTTGGAGCATAGATGCGG+TGG - chr8_1:67793734-67793753 Msa1209390:intron 45.0%
!!! TTTTGGAGCATAGATGCGGT+GGG - chr8_1:67793735-67793754 Msa1209390:intron 45.0%
AAGACTGAATTGAATGGCGC+TGG - chr8_1:67793787-67793806 Msa1209390:intron 45.0%
TGAAGAAAGACGAGGAAGAG+TGG + chr8_1:67788768-67788787 None:intergenic 45.0%
CTAAGGGATGAAGAAAGACG+AGG + chr8_1:67793842-67793861 None:intergenic 45.0%
AGAGCTTCGAACCACAAACT+TGG + chr8_1:67793867-67793886 None:intergenic 45.0%
AAGTACCTTGCGTGAGTCAT+TGG + chr8_1:67793915-67793934 None:intergenic 45.0%
! AGTCTTCCCGTTGGTAGAAA+TGG - chr8_1:67794105-67794124 Msa1209390:intron 45.0%
! TTCCCGTTGGTAGAAATGGT+AGG - chr8_1:67794109-67794128 Msa1209390:intron 45.0%
! TCCCGTTGGTAGAAATGGTA+GGG - chr8_1:67794110-67794129 Msa1209390:intron 45.0%
TCCCTACCATTTCTACCAAC+GGG + chr8_1:67789049-67789068 None:intergenic 45.0%
CTTTATTGAGGAGGTGGAAC+TGG - chr8_1:67794285-67794304 Msa1209390:intron 45.0%
!! CAATATCGGCTTGTAAGGTG+AGG + chr8_1:67794469-67794488 None:intergenic 45.0%
AATTGTGATGGCCTGATAGC+AGG + chr8_1:67794560-67794579 None:intergenic 45.0%
TGCTATCAGGCCATCACAAT+TGG - chr8_1:67794559-67794578 Msa1209390:intron 45.0%
GCTATCAGGCCATCACAATT+GGG - chr8_1:67794560-67794579 Msa1209390:intron 45.0%
! AGAAATGGACATCTGGAGTG+TGG + chr8_1:67794586-67794605 None:intergenic 45.0%
ACACTCCAGATGTCCATTTC+TGG - chr8_1:67794585-67794604 Msa1209390:intron 45.0%
CACTCCAGATGTCCATTTCT+GGG - chr8_1:67794586-67794605 Msa1209390:intron 45.0%
! ATGTCCATTTCTGGGAGTGA+AGG - chr8_1:67794594-67794613 Msa1209390:intron 45.0%
! TGTCCATTTCTGGGAGTGAA+GGG - chr8_1:67794595-67794614 Msa1209390:intron 45.0%
GAAATTAGGACTGGAACAGG+TGG + chr8_1:67794887-67794906 None:intergenic 45.0%
GTGGAAATTAGGACTGGAAC+AGG + chr8_1:67794890-67794909 None:intergenic 45.0%
TGGTTGAGCAGGTGGAAATT+AGG + chr8_1:67794901-67794920 None:intergenic 45.0%
! TGTTACTAATCAGAGTGCCC+AGG + chr8_1:67795335-67795354 None:intergenic 45.0%
GATCTATGACACACACTGGT+AGG + chr8_1:67795363-67795382 None:intergenic 45.0%
ATAACTTCTCATCGTCCGCA+GGG + chr8_1:67795446-67795465 None:intergenic 45.0%
GCATTGAGTAAGCTTCCAAC+TGG - chr8_1:67795486-67795505 Msa1209390:intron 45.0%
AGTACTTGAGACAGTCGCTT+CGG + chr8_1:67795775-67795794 None:intergenic 45.0%
CTTCCCTTTGTACTGAAGTG+TGG - chr8_1:67795927-67795946 Msa1209390:CDS 45.0%
! GGGCGAGAGTGTACATAATT+TGG + chr8_1:67795989-67796008 None:intergenic 45.0%
TCAAATCGAGACGTCATTGG+GGG - chr8_1:67796121-67796140 Msa1209390:intron 45.0%
CATTGGGGGTAGAGAGAAAT+AGG - chr8_1:67796135-67796154 Msa1209390:intron 45.0%
TGTTGGGGTAACCCTAATGT+TGG - chr8_1:67796172-67796191 Msa1209390:CDS 45.0%
CACAAGGTGAATGGTATGGT+TGG + chr8_1:67796201-67796220 None:intergenic 45.0%
ACCTCCCTATTAAGATCAGG+TGG - chr8_1:67796243-67796262 Msa1209390:CDS 45.0%
ACCACCTGATCTTAATAGGG+AGG + chr8_1:67796247-67796266 None:intergenic 45.0%
CTCACATGATGATTCTGGCA+TGG + chr8_1:67796271-67796290 None:intergenic 45.0%
GAAAAGAGGAACTCGTGGAT+AGG + chr8_1:67796306-67796325 None:intergenic 45.0%
CCAAAGAAAAGAGGAACTCG+TGG + chr8_1:67796311-67796330 None:intergenic 45.0%
! CCACGAGTTCCTCTTTTCTT+TGG - chr8_1:67796308-67796327 Msa1209390:intron 45.0%
CTTGCCATCCCAAAGAAAAG+AGG + chr8_1:67796320-67796339 None:intergenic 45.0%
!! AGGTGAATGAGTTGGTTTGG+GGG + chr8_1:67796649-67796668 None:intergenic 45.0%
ATGGGATGCCTATACAAGCA+TGG + chr8_1:67797002-67797021 None:intergenic 45.0%
AGAGGAATTAGGCAGGAGAT+AGG - chr8_1:67797060-67797079 Msa1209390:intron 45.0%
GAGGAATTAGGCAGGAGATA+GGG - chr8_1:67797061-67797080 Msa1209390:intron 45.0%
GTCTTCCAAGCAGACGAATT+TGG + chr8_1:67797163-67797182 None:intergenic 45.0%
AATTCGTCTGCTTGGAAGAC+AGG - chr8_1:67797163-67797182 Msa1209390:CDS 45.0%
!! AAAAAAAACAAATTATATAT+AGG - chr8_1:67793339-67793358 Msa1209390:intron 5.0%
AGAAAGACGAGGAAGAGTGG+TGG + chr8_1:67788765-67788784 None:intergenic 50.0%
GCAGCTCCGAACTACGAATT+TGG + chr8_1:67788807-67788826 None:intergenic 50.0%
! GCACCGACATTTCTGTCCAA+AGG - chr8_1:67789284-67789303 Msa1209390:three_prime_UTR 50.0%
GCGTCGTGTCAAGGTCATAT+AGG - chr8_1:67789427-67789446 Msa1209390:intron 50.0%
CAACAACAGACCTGTGCTTG+TGG - chr8_1:67789694-67789713 Msa1209390:intron 50.0%
AGGACCCTGCAGATGATCAA+AGG - chr8_1:67789918-67789937 Msa1209390:intron 50.0%
GCATTGAGTAAGCTTCCCAC+TGG - chr8_1:67789965-67789984 Msa1209390:intron 50.0%
GTCTACACACCATGACTGGA+AGG - chr8_1:67791482-67791501 Msa1209390:intron 50.0%
GGGTTACAAGATGATCACCG+AGG - chr8_1:67791702-67791721 Msa1209390:intron 50.0%
GTGCCATGAAAGACTCAAGG+TGG - chr8_1:67791939-67791958 Msa1209390:intron 50.0%
CTCCGGAATAACCATGCCTT+CGG + chr8_1:67792641-67792660 None:intergenic 50.0%
AGAAAGACGAGGAAGAGTGG+TGG + chr8_1:67788765-67788784 None:intergenic 50.0%
GCAATCCAATGACTCACGCA+AGG - chr8_1:67793907-67793926 Msa1209390:intron 50.0%
CACTCCCAGAAATGGACATC+TGG + chr8_1:67794593-67794612 None:intergenic 50.0%
! GTCCATTTCTGGGAGTGAAG+GGG - chr8_1:67794596-67794615 Msa1209390:intron 50.0%
GAGCAGGTGGAAATTAGGAC+TGG + chr8_1:67794896-67794915 None:intergenic 50.0%
CAATGACAGACCTGTGCTTG+TGG - chr8_1:67795079-67795098 Msa1209390:intron 50.0%
CATAACTTCTCATCGTCCGC+AGG + chr8_1:67795447-67795466 None:intergenic 50.0%
CAAGTTAAGCAATGCCACCG+TGG + chr8_1:67795633-67795652 None:intergenic 50.0%
TTCATGACGCTGTCAGCTCT+TGG + chr8_1:67795700-67795719 None:intergenic 50.0%
! GGCTTGGTAAGCTGCCAAAT+TGG + chr8_1:67795826-67795845 None:intergenic 50.0%
TGGGGGTAGAGAGAAATAGG+AGG - chr8_1:67796138-67796157 Msa1209390:intron 50.0%
AGGAGGTAACTGCTCACTGT+TGG - chr8_1:67796155-67796174 Msa1209390:CDS 50.0%
GGAGGTAACTGCTCACTGTT+GGG - chr8_1:67796156-67796175 Msa1209390:CDS 50.0%
GAGGTAACTGCTCACTGTTG+GGG - chr8_1:67796157-67796176 Msa1209390:CDS 50.0%
AGACGAGGAAGAGTGGTGGT+TGG + chr8_1:67788761-67788780 None:intergenic 55.0%
ACACGTGTCAGACACGCCTT+TGG + chr8_1:67789303-67789322 None:intergenic 55.0%
GCGTGACACATGTCCAACAC+CGG - chr8_1:67789341-67789360 Msa1209390:three_prime_UTR 55.0%
CAACAGACCTGTGCTTGTGG+TGG - chr8_1:67789697-67789716 Msa1209390:intron 55.0%
GATGCTACCACCACAAGCAC+AGG + chr8_1:67789707-67789726 None:intergenic 55.0%
TAAGCTTCCCACTGGGGAAG+AGG - chr8_1:67789973-67789992 Msa1209390:intron 55.0%
CGCGATCTAGTCTAAGGAGG+AGG - chr8_1:67790897-67790916 Msa1209390:intron 55.0%
GTGACGGCTCACGAGAGAAA+GGG + chr8_1:67792310-67792329 None:intergenic 55.0%
CATCCACGTTGCAGATCCGA+AGG - chr8_1:67792622-67792641 Msa1209390:intron 55.0%
ATGCCTTCGGATCTGCAACG+TGG + chr8_1:67792628-67792647 None:intergenic 55.0%
ACGTTGCAGATCCGAAGGCA+TGG - chr8_1:67792627-67792646 Msa1209390:intron 55.0%
TGTGATGGCCTGATAGCAGG+TGG + chr8_1:67794557-67794576 None:intergenic 55.0%
GGAGTGTGGCCCAATTGTGA+TGG + chr8_1:67794572-67794591 None:intergenic 55.0%
CACCCCTTCACTCCCAGAAA+TGG + chr8_1:67794601-67794620 None:intergenic 55.0%
! TGAAGGGGTGTGTCGAGAGT+AGG - chr8_1:67794611-67794630 Msa1209390:intron 55.0%
TGACAGACCTGTGCTTGTGG+TGG - chr8_1:67795082-67795101 Msa1209390:intron 55.0%
TTTGCTCTGCAGAGACGGTG+AGG - chr8_1:67796791-67796810 Msa1209390:intron 55.0%
TCTGCAGGGTCCTGTTCCTG+TGG + chr8_1:67789911-67789930 None:intergenic 60.0%
! GGTGACGGCTCACGAGAGAA+AGG + chr8_1:67792311-67792330 None:intergenic 60.0%
GAGCATAGATGCGGTGGGTG+TGG - chr8_1:67793740-67793759 Msa1209390:intron 60.0%
CCTGATAGCAGGTGGCCCAA+TGG + chr8_1:67794549-67794568 None:intergenic 60.0%
CCATTGGGCCACCTGCTATC+AGG - chr8_1:67794546-67794565 Msa1209390:intron 60.0%
! GGTCTGGTTGGTTGAGCAGG+TGG + chr8_1:67794909-67794928 None:intergenic 60.0%
! GAGGGTCTGGTTGGTTGAGC+AGG + chr8_1:67794912-67794931 None:intergenic 60.0%
CTCTGCAGAGACGGTGAGGA+AGG - chr8_1:67796795-67796814 Msa1209390:intron 60.0%
GCTGCGACCACCACAAGCAC+AGG + chr8_1:67795092-67795111 None:intergenic 65.0%
GTCACAGGCACAGGACCCTG+CGG - chr8_1:67795428-67795447 Msa1209390:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 67788737 67797480 67788737 ID=Msa1209390;Name=Msa1209390
chr8_1 mRNA 67788737 67797480 67788737 ID=Msa1209390-mRNA-1;Parent=Msa1209390;Name=Msa1209390-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.5|0.45|1|0.9|0.90|11|1402|253
chr8_1 exon 67788737 67789433 67788737 ID=Msa1209390-mRNA-1:exon:22526;Parent=Msa1209390-mRNA-1
chr8_1 exon 67790347 67790469 67790347 ID=Msa1209390-mRNA-1:exon:22525;Parent=Msa1209390-mRNA-1
chr8_1 exon 67790630 67790782 67790630 ID=Msa1209390-mRNA-1:exon:22524;Parent=Msa1209390-mRNA-1
chr8_1 exon 67791090 67791236 67791090 ID=Msa1209390-mRNA-1:exon:22523;Parent=Msa1209390-mRNA-1
chr8_1 exon 67792002 67792154 67792002 ID=Msa1209390-mRNA-1:exon:22522;Parent=Msa1209390-mRNA-1
chr8_1 exon 67792289 67792474 67792289 ID=Msa1209390-mRNA-1:exon:22521;Parent=Msa1209390-mRNA-1
chr8_1 exon 67795899 67796021 67795899 ID=Msa1209390-mRNA-1:exon:22520;Parent=Msa1209390-mRNA-1
chr8_1 exon 67796151 67796303 67796151 ID=Msa1209390-mRNA-1:exon:22519;Parent=Msa1209390-mRNA-1
chr8_1 exon 67796475 67796621 67796475 ID=Msa1209390-mRNA-1:exon:22518;Parent=Msa1209390-mRNA-1
chr8_1 exon 67797067 67797219 67797067 ID=Msa1209390-mRNA-1:exon:22517;Parent=Msa1209390-mRNA-1
chr8_1 exon 67797352 67797480 67797352 ID=Msa1209390-mRNA-1:exon:22516;Parent=Msa1209390-mRNA-1
chr8_1 CDS 67797352 67797480 67797352 ID=Msa1209390-mRNA-1:cds;Parent=Msa1209390-mRNA-1
chr8_1 CDS 67797067 67797219 67797067 ID=Msa1209390-mRNA-1:cds;Parent=Msa1209390-mRNA-1
chr8_1 CDS 67796475 67796621 67796475 ID=Msa1209390-mRNA-1:cds;Parent=Msa1209390-mRNA-1
chr8_1 CDS 67796151 67796303 67796151 ID=Msa1209390-mRNA-1:cds;Parent=Msa1209390-mRNA-1
chr8_1 CDS 67795899 67796021 67795899 ID=Msa1209390-mRNA-1:cds;Parent=Msa1209390-mRNA-1
chr8_1 CDS 67792418 67792474 67792418 ID=Msa1209390-mRNA-1:cds;Parent=Msa1209390-mRNA-1
chr8_1 three_prime_UTR 67792289 67792417 67792289 ID=Msa1209390-mRNA-1:three_prime_utr;Parent=Msa1209390-mRNA-1
chr8_1 three_prime_UTR 67792002 67792154 67792002 ID=Msa1209390-mRNA-1:three_prime_utr;Parent=Msa1209390-mRNA-1
chr8_1 three_prime_UTR 67791090 67791236 67791090 ID=Msa1209390-mRNA-1:three_prime_utr;Parent=Msa1209390-mRNA-1
chr8_1 three_prime_UTR 67790630 67790782 67790630 ID=Msa1209390-mRNA-1:three_prime_utr;Parent=Msa1209390-mRNA-1
chr8_1 three_prime_UTR 67790347 67790469 67790347 ID=Msa1209390-mRNA-1:three_prime_utr;Parent=Msa1209390-mRNA-1
chr8_1 three_prime_UTR 67788737 67789433 67788737 ID=Msa1209390-mRNA-1:three_prime_utr;Parent=Msa1209390-mRNA-1
Gene Sequence

>Msa1209390

ATGGCGTTGTTTCGTGTCAAACCAACCACCACTCTTCCTCGTCTTTCTTCAACAATTTCCCTTCGAACCAAATTCGTAGTTCGGAGCTGCAATCTTCAGTTCCAAAGTCAACCCAATGACTCACAAAAGTTAGTTCTGGAAGTGAAAGAGAGGCTTGAAAAAGAATACTATAGTCTTCCTGTTGGTAGAAATGGTAGGGATGACGAAGATATGATACAATGGTTTCTGAAAGATCGCAAGTTTGATGTTGAAGAAGCTGTTTCGAAGTTGACTAAAGCTATTAAATGGCGTCAAGATTTTGAGGTGTCTAAATTGACTGAAGAAGCCATCAAAGATATCTCTCAAACTGAAAAAGCATATTTACATGAATTTCTAGATATCAACAACAGACCTGTGCTTGTGGTGGTAGCATCAAAGCATTTTCCTAAAGAACAGGACCCTGCAGATGATCAAAGGTTGTGTGTTTTCTTAATTGAGAAGGCATTGAGTAAGCTTCCCACTGGGGAAGAGGAAATACTTGCAATATTTGATCTGAGAGGTTTTGGTCCGGAAAATGCTGATTTTAAATTCTTGGCATTCTTGTTTAATGTATTCTACAATTACTATCCTAATCGATTGTCGCAAGTATTATTTGTGGATGCTCCTGCTGTGTTTAAGCCATTTTGGCGGCTTATGAAGAAGTTGTTAAAATCACATGCGTCTCAGCATAGATGCGGTGGGTGTGGATACAGACAAGAAACTGAGAAGAGAAGACTGAATTGA

Protein sequence

>Msa1209390

MALFRVKPTTTLPRLSSTISLRTKFVVRSCNLQFQSQPNDSQKLVLEVKERLEKEYYSLPVGRNGRDDEDMIQWFLKDRKFDVEEAVSKLTKAIKWRQDFEVSKLTEEAIKDISQTEKAYLHEFLDINNRPVLVVVASKHFPKEQDPADDQRLCVFLIEKALSKLPTGEEEILAIFDLRGFGPENADFKFLAFLFNVFYNYYPNRLSQVLFVDAPAVFKPFWRLMKKLLKSHASQHRCGGCGYRQETEKRRLN*