AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127940 MtrunA17_Chr7g0271211 97.196 214 6 0 1 214 1 214 2.12e-150 416
Msa1127940 MtrunA17_Chr1g0193421 78.392 199 43 0 16 214 20 218 9.60e-113 321
Msa1127940 MtrunA17_Chr1g0193671 65.700 207 71 0 8 214 11 217 1.27e-94 275
Msa1127940 MtrunA17_Chr4g0007041 46.047 215 109 3 1 210 3 215 4.78e-56 177
Msa1127940 MtrunA17_Chr6g0449731 48.113 212 104 3 4 211 6 215 5.46e-56 177
Msa1127940 MtrunA17_Chr6g0449761 48.113 212 104 3 4 211 6 215 5.51e-56 178
Msa1127940 MtrunA17_Chr6g0449751 48.792 207 100 3 9 211 11 215 7.90e-56 177
Msa1127940 MtrunA17_Chr1g0189841 45.833 216 111 3 1 211 3 217 9.99e-56 176
Msa1127940 MtrunA17_Chr4g0007051 45.581 215 110 3 1 210 3 215 2.07e-55 176
Msa1127940 MtrunA17_Chr4g0007031 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1127940 MtrunA17_Chr5g0419971 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1127940 MtrunA17_Chr5g0419981 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1127940 MtrunA17_Chr6g0449771 47.642 212 105 3 4 211 6 215 3.21e-55 175
Msa1127940 MtrunA17_Chr2g0285871 45.581 215 110 3 1 210 3 215 4.53e-55 175
Msa1127940 MtrunA17_Chr5g0414971 45.641 195 105 1 19 212 26 220 1.13e-54 174
Msa1127940 MtrunA17_Chr1g0210761 43.810 210 105 5 9 213 8 209 6.32e-53 169
Msa1127940 MtrunA17_Chr6g0449791 50.829 181 82 3 24 199 26 204 7.25e-50 161
Msa1127940 MtrunA17_Chr1g0156131 42.453 212 114 2 2 211 4 209 4.96e-49 159
Msa1127940 MtrunA17_Chr6g0449781 43.961 207 109 4 9 211 11 214 5.13e-47 154
Msa1127940 MtrunA17_Chr2g0292831 44.103 195 104 2 19 211 21 212 2.70e-46 152
Msa1127940 MtrunA17_Chr2g0292901 43.158 190 103 2 24 211 27 213 5.23e-44 146
Msa1127940 MtrunA17_Chr1g0178711 38.073 218 125 4 4 214 10 224 1.05e-43 146
Msa1127940 MtrunA17_Chr2g0292861 43.605 172 94 2 43 211 7 178 2.63e-40 135
Msa1127940 MtrunA17_Chr3g0130241 40.513 195 97 4 19 211 88 265 3.65e-40 139
Msa1127940 MtrunA17_Chr2g0292841 43.605 172 94 2 43 211 7 178 1.38e-39 134
Msa1127940 MtrunA17_Chr8g0343934 37.559 213 128 4 2 214 1 208 2.27e-39 134
Msa1127940 MtrunA17_Chr8g0335851 45.562 169 89 2 19 185 25 192 4.37e-39 134
Msa1127940 MtrunA17_Chr8g0343954 38.542 192 114 3 23 214 21 208 1.32e-38 132
Msa1127940 MtrunA17_Chr2g0313961 37.745 204 123 3 8 211 6 205 1.86e-38 132
Msa1127940 MtrunA17_Chr8g0343961 37.089 213 129 4 2 214 1 208 2.48e-38 131
Msa1127940 MtrunA17_Chr8g0343911 37.438 203 125 1 9 211 4 204 3.10e-38 131
Msa1127940 MtrunA17_Chr2g0302171 37.441 211 127 4 2 212 1 206 2.19e-37 129
Msa1127940 MtrunA17_Chr2g0300581 40.107 187 110 1 26 212 23 207 3.98e-37 128
Msa1127940 MtrunA17_Chr2g0301611 36.967 211 128 4 2 212 1 206 6.43e-37 128
Msa1127940 MtrunA17_Chr2g0297231 36.493 211 129 4 2 212 1 206 7.12e-37 127
Msa1127940 MtrunA17_Chr2g0300591 39.153 189 113 1 26 214 23 209 1.68e-36 127
Msa1127940 MtrunA17_Chr2g0300561 40.323 186 109 1 26 211 23 206 5.44e-36 125
Msa1127940 MtrunA17_Chr3g0084531 35.545 211 131 4 2 212 1 206 1.45e-35 124
Msa1127940 MtrunA17_Chr2g0297241 36.019 211 130 4 2 212 1 206 2.17e-35 124
Msa1127940 MtrunA17_Chr2g0302541 38.421 190 113 3 23 212 21 206 2.46e-35 124
Msa1127940 MtrunA17_Chr2g0292911 52.941 119 54 1 43 159 7 125 1.55e-34 120
Msa1127940 MtrunA17_Chr3g0084511 34.597 211 132 4 2 212 1 205 2.58e-34 121
Msa1127940 MtrunA17_Chr4g0003361 40.196 204 114 5 8 211 6 201 3.36e-34 121
Msa1127940 MtrunA17_Chr4g0012651 38.624 189 112 3 24 212 22 206 4.20e-34 120
Msa1127940 MtrunA17_Chr7g0217811 38.095 189 113 3 24 212 22 206 4.24e-34 120
Msa1127940 MtrunA17_Chr5g0411961 32.701 211 137 4 2 212 1 206 1.68e-33 119
Msa1127940 MtrunA17_Chr3g0084521 35.545 211 130 5 2 212 1 205 3.32e-33 118
Msa1127940 MtrunA17_Chr8g0344051 39.560 182 105 4 2 182 1 178 2.79e-32 116
Msa1127940 MtrunA17_Chr2g0321581 44.776 134 71 2 76 208 70 201 9.22e-32 114
Msa1127940 MtrunA17_Chr2g0321591 44.776 134 71 2 76 208 70 201 1.13e-31 114
Msa1127940 MtrunA17_Chr8g0344021 41.176 170 98 2 2 170 1 169 2.69e-31 114
Msa1127940 MtrunA17_Chr2g0321601 36.842 209 115 6 1 208 8 200 3.28e-31 113
Msa1127940 MtrunA17_Chr8g0343921 36.932 176 108 2 8 183 5 177 3.38e-31 113
Msa1127940 MtrunA17_Chr4g0026201 41.045 134 76 2 76 208 71 202 2.66e-30 110
Msa1127940 MtrunA17_Chr4g0026191 41.045 134 76 2 76 208 71 202 2.72e-30 110
Msa1127940 MtrunA17_Chr8g0344041 39.645 169 97 4 2 169 5 169 7.75e-29 107
Msa1127940 MtrunA17_Chr8g0344031 38.235 170 103 2 1 170 1 168 5.40e-26 100
Msa1127940 MtrunA17_Chr3g0115141 34.574 188 115 5 25 211 26 206 2.49e-24 95.5
Msa1127940 MtrunA17_Chr3g0084551 32.075 212 123 7 2 208 1 196 1.44e-22 91.7
Msa1127940 MtrunA17_Chr2g0286171 30.047 213 140 6 1 211 3 208 3.70e-22 90.1
Msa1127940 MtrunA17_Chr3g0084501 42.991 107 59 2 2 108 1 105 3.50e-20 82.0
Msa1127940 MtrunA17_Chr2g0292881 56.140 57 23 1 91 145 1 57 1.74e-13 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127940 AT1G09560.1 71.357 199 57 0 16 214 20 218 3.97e-98 284
Msa1127940 AT3G62020.1 67.633 207 65 2 10 214 12 218 7.61e-96 278
Msa1127940 AT1G02335.1 61.836 207 78 1 9 214 12 218 2.99e-89 262
Msa1127940 AT3G62020.2 67.956 181 57 1 35 214 9 189 5.79e-86 253
Msa1127940 AT5G26700.1 57.143 196 81 1 19 214 20 212 1.57e-76 229
Msa1127940 AT3G05930.1 53.140 207 96 1 9 214 12 218 1.96e-73 222
Msa1127940 AT1G18970.1 49.756 205 101 1 8 212 17 219 1.92e-63 196
Msa1127940 AT1G18980.1 50.254 197 96 1 16 212 25 219 3.39e-61 191
Msa1127940 AT5G39110.1 46.818 220 107 3 2 211 1 220 2.24e-60 189
Msa1127940 AT5G39150.1 47.489 219 106 3 2 211 1 219 2.32e-60 189
Msa1127940 AT3G05950.1 50.698 215 100 3 4 212 8 222 4.84e-60 188
Msa1127940 AT5G39120.1 47.032 219 107 3 2 211 1 219 1.29e-59 187
Msa1127940 AT5G39180.1 47.032 219 107 3 2 211 1 219 1.51e-59 186
Msa1127940 AT5G39160.1 46.411 209 108 2 8 212 12 220 4.37e-59 185
Msa1127940 AT5G39190.1 46.411 209 108 2 8 212 12 220 7.37e-59 185
Msa1127940 AT5G39130.1 46.411 209 108 2 8 212 12 220 1.37e-58 184
Msa1127940 AT4G14630.1 48.387 217 105 3 2 211 6 222 1.61e-58 184
Msa1127940 AT3G04200.1 47.768 224 106 4 1 213 1 224 6.35e-58 182
Msa1127940 AT5G39160.3 45.714 210 104 3 8 212 12 216 9.01e-56 177
Msa1127940 AT5G38960.1 47.805 205 102 3 13 212 19 223 2.24e-55 176
Msa1127940 AT5G38910.1 46.154 208 108 2 8 211 12 219 2.79e-55 176
Msa1127940 AT5G38940.1 47.208 197 100 2 19 211 25 221 3.89e-52 167
Msa1127940 AT5G38940.2 47.208 197 100 2 19 211 49 245 4.98e-52 168
Msa1127940 AT5G38930.1 46.500 200 103 2 16 211 22 221 6.14e-52 167
Msa1127940 AT5G39160.2 42.381 210 93 3 8 212 12 198 1.16e-49 160
Msa1127940 AT5G39190.2 42.381 210 93 3 8 212 12 198 1.41e-49 160
Msa1127940 AT3G04170.1 43.318 217 114 4 4 214 8 221 2.93e-49 160
Msa1127940 AT3G04150.1 42.791 215 114 4 4 209 8 222 1.43e-48 159
Msa1127940 AT3G04150.2 40.351 228 114 4 4 209 8 235 7.92e-48 157
Msa1127940 AT3G04190.1 43.814 194 105 2 20 209 26 219 1.64e-47 156
Msa1127940 AT3G04180.1 42.784 194 107 2 20 209 26 219 4.30e-47 155
Msa1127940 AT1G10460.1 41.000 200 113 3 17 211 16 215 4.44e-46 152
Msa1127940 AT5G61750.1 41.011 178 103 1 2 177 1 178 3.14e-43 144
Msa1127940 AT3G10080.1 37.931 203 118 4 16 213 22 221 2.99e-41 140
Msa1127940 AT3G10080.2 37.931 203 118 4 16 213 93 292 1.65e-40 140
Msa1127940 AT1G74820.1 39.894 188 111 1 24 211 40 225 1.72e-40 138
Msa1127940 AT5G20630.1 37.441 211 129 2 2 212 1 208 1.76e-38 132
Msa1127940 AT5G38910.2 37.864 206 91 2 8 211 12 182 4.56e-36 125
Msa1127940 AT1G72610.1 37.895 190 116 1 23 212 18 205 1.11e-35 125
Msa1127940 AT5G38950.1 42.857 63 36 0 140 202 2 64 4.58e-11 58.2

Find 83 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCGTGCTTGTTATTT+TGG 0.110979 7_3:-79645512 Msa1127940:three_prime_UTR
GAACTTCCTTGGTACCAATT+TGG 0.208001 7_3:+79645723 None:intergenic
CCTCGCAGGGTTGTTGCTTC+TGG 0.229387 7_3:-79646921 Msa1127940:CDS
GTACATAACCACTGTTCTTT+TGG 0.233211 7_3:+79645858 None:intergenic
TTGTCTTGCCTACATATAAT+TGG 0.267421 7_3:-79647000 Msa1127940:five_prime_UTR
CAAAATAACAAGCACGCATT+AGG 0.285694 7_3:+79645513 None:intergenic
TGGAAATGAACCAATCCTTT+AGG 0.302524 7_3:+79645878 None:intergenic
TTGACTCAAGCATTCCAAAT+TGG 0.317621 7_3:-79645737 Msa1127940:CDS
TTTGGAACTCATAAAACAAT+TGG 0.322743 7_3:-79645585 Msa1127940:three_prime_UTR
GCTTGAGTCAAAATATTATC+TGG 0.334327 7_3:+79645749 None:intergenic
GTTGATTTACATTTCATGTT+TGG 0.338674 7_3:-79645603 Msa1127940:three_prime_UTR
ACAAGAATTAATATAGTATA+AGG 0.342393 7_3:+79647146 None:intergenic
GATATCAAAGACTATTGTTA+AGG 0.351789 7_3:-79645918 Msa1127940:CDS
TGTGTTGCAGACCTTGCTTC+TGG 0.354120 7_3:-79646851 Msa1127940:intron
CTCTCTTCCAAGTCTTCTCT+TGG 0.370804 7_3:-79647101 Msa1127940:five_prime_UTR
CAATCCTTGATCTCACTACT+TGG 0.371152 7_3:+79645676 None:intergenic
TTGGAACTCATAAAACAATT+GGG 0.383345 7_3:-79645584 Msa1127940:three_prime_UTR
GTTGTTTGTGGCTCCTGGTT+TGG 0.387912 7_3:+79646135 None:intergenic
GTACCTGCTGCAGTAATTGC+AGG 0.389830 7_3:-79645839 Msa1127940:CDS
AAAATAACAAGCACGCATTA+GGG 0.397015 7_3:+79645514 None:intergenic
ATATCAAAGACTATTGTTAA+GGG 0.409296 7_3:-79645917 Msa1127940:CDS
CAACACACTTGGTGTGTCAT+TGG 0.413477 7_3:-79646062 Msa1127940:CDS
TTAACAGCGATTCTAGTGAA+TGG 0.422863 7_3:-79646217 Msa1127940:intron
TTGAAGGTCAATTAGATGTT+GGG 0.424187 7_3:-79645964 Msa1127940:CDS
AATGTGTTGTTTGTGGCTCC+TGG 0.432005 7_3:+79646130 None:intergenic
CACCAAGTGTGTTGAGTCCT+GGG 0.432787 7_3:+79646071 None:intergenic
GAAACATTTGTGTTTCCTAA+AGG 0.432964 7_3:-79645893 Msa1127940:CDS
GTCAAAATATTATCTGGAAC+AGG 0.434168 7_3:+79645755 None:intergenic
GAGATTGTGTTTGTTCTTGA+AGG 0.435097 7_3:-79645980 Msa1127940:CDS
GGAGCCACAAACAACACATT+TGG 0.436644 7_3:-79646127 Msa1127940:CDS
CTTGAAGGTCAATTAGATGT+TGG 0.439258 7_3:-79645965 Msa1127940:CDS
TTTGAAAACCAATTATATGT+AGG 0.446939 7_3:+79646992 None:intergenic
ATTTGTGTTTCCTAAAGGAT+TGG 0.463106 7_3:-79645888 Msa1127940:CDS
TCTTCTCACTTAAAATAAAG+TGG 0.475636 7_3:+79647171 None:intergenic
AACATTGGCTAAGGTTACTA+AGG 0.477034 7_3:+79646102 None:intergenic
ACAGAGGTCTTGAAGATTGT+CGG 0.481708 7_3:+79646871 None:intergenic
CAGAGGTCTTGAAGATTGTC+GGG 0.482659 7_3:+79646872 None:intergenic
GTAGAAGCAAACAAAGTAAG+AGG 0.485526 7_3:+79645782 None:intergenic
TGGTTTGGCTAGTACGTTGG+TGG 0.495482 7_3:+79646150 None:intergenic
GAGTTGGAATGAAGTGGTAA+TGG 0.496464 7_3:+79647062 None:intergenic
TCGGTGACAAACAAATTAAC+CGG 0.501973 7_3:+79646964 None:intergenic
GAGCAATATGAATTATGAGT+TGG 0.502930 7_3:+79647046 None:intergenic
TCCTGGTTTGGCTAGTACGT+TGG 0.504209 7_3:+79646147 None:intergenic
GCTTCATCATTTGTTATGAT+CGG 0.509664 7_3:+79646945 None:intergenic
AGTTGGAATGAAGTGGTAAT+GGG 0.516652 7_3:+79647063 None:intergenic
GAAATCAGCTGCGGTTACAT+TGG 0.516657 7_3:+79646174 None:intergenic
AATCCTGCAATTACTGCAGC+AGG 0.520151 7_3:+79645836 None:intergenic
GCTGCGGTTACATTGGAAGC+TGG 0.520487 7_3:+79646181 None:intergenic
ACACCAAGTGTGTTGAGTCC+TGG 0.524633 7_3:+79646070 None:intergenic
GGAACCAAATGTGTTGTTTG+TGG 0.527740 7_3:+79646123 None:intergenic
TGGAAGAGAGACAGAAGACT+TGG 0.528749 7_3:+79647114 None:intergenic
GCACCCAAGTAGTGAGATCA+AGG 0.528959 7_3:-79645680 Msa1127940:exon
CAAATGATGAAGCTCCTCGC+AGG 0.535137 7_3:-79646935 Msa1127940:CDS
TACAAATTTCAATCAACCAA+AGG 0.542939 7_3:+79645541 None:intergenic
ATTTATACCAAGAGAAGACT+TGG 0.545538 7_3:+79647094 None:intergenic
GCCAATGTTCAGAAAATCCC+AGG 0.563692 7_3:-79646088 Msa1127940:CDS
ATCCCAGGACTCAACACACT+TGG 0.570656 7_3:-79646073 Msa1127940:CDS
CACGTGGGTGAGTGTGAGGT+GGG 0.576033 7_3:+79646008 None:intergenic
AAGTTCAGAAAATCAAGTCT+AGG 0.576600 7_3:-79645706 Msa1127940:CDS
ACAGTTTAAATAAACGTGTA+CGG 0.581979 7_3:-79645418 Msa1127940:three_prime_UTR
GCACGTGGGTGAGTGTGAGG+TGG 0.584372 7_3:+79646007 None:intergenic
AAATGATGAAGCTCCTCGCA+GGG 0.586522 7_3:-79646934 Msa1127940:CDS
AGCATTCCAAATTGGTACCA+AGG 0.587841 7_3:-79645729 Msa1127940:CDS
TGGAACTCATAAAACAATTG+GGG 0.593765 7_3:-79645583 Msa1127940:three_prime_UTR
AATCCTTGATCTCACTACTT+GGG 0.605443 7_3:+79645677 None:intergenic
CAATAGTCAATTGCAAGGAA+CGG 0.606871 7_3:-79645813 Msa1127940:CDS
AACACAATCTCAGTTGCACG+TGG 0.610170 7_3:+79645992 None:intergenic
ACCAACGTACTAGCCAAACC+AGG 0.618402 7_3:-79646148 Msa1127940:CDS
CGTATTGACTATGCTGTAGG+TGG 0.621828 7_3:-79646037 Msa1127940:CDS
GTTCATTTCCAAAAGAACAG+TGG 0.623665 7_3:-79645866 Msa1127940:CDS
AAAATATTATCTGGAACAGG+TGG 0.624953 7_3:+79645758 None:intergenic
ATGTAACGGTACCAGAAGCA+AGG 0.638804 7_3:+79646840 None:intergenic
CAAAGTTAAATAAAATGCAG+AGG 0.642749 7_3:+79645625 None:intergenic
GGATTCAATAGTCAATTGCA+AGG 0.643876 7_3:-79645818 Msa1127940:CDS
AATTATGAGTTGGAATGAAG+TGG 0.654204 7_3:+79647056 None:intergenic
GCACGTATTGACTATGCTGT+AGG 0.654744 7_3:-79646040 Msa1127940:CDS
GTTGCACGTGGGTGAGTGTG+AGG 0.660628 7_3:+79646004 None:intergenic
GTCGGGATCAGCAGTGACAG+AGG 0.662254 7_3:+79646889 None:intergenic
CCAGAAGCAACAACCCTGCG+AGG 0.671018 7_3:+79646921 None:intergenic
GGGATCAGCAGTGACAGAGG+TGG 0.687303 7_3:+79646892 None:intergenic
GTTGGTGGAGAAATCAGCTG+CGG 0.730459 7_3:+79646165 None:intergenic
ACACAATCTCAGTTGCACGT+GGG 0.741428 7_3:+79645993 None:intergenic
AAGCAAGGTCTGCAACACAG+AGG 0.751663 7_3:+79646855 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATATAAGAAAG+AGG + chr7_3:79645869-79645888 None:intergenic 10.0%
!! TATGATATTATAAAAGATAA+GGG + chr7_3:79646030-79646049 None:intergenic 10.0%
!! AAAAAAAAAATATAAGAAAG+AGG + chr7_3:79645869-79645888 None:intergenic 10.0%
!! TATGATATTATAAAAGATAA+GGG + chr7_3:79646030-79646049 None:intergenic 10.0%
!! ACAAGAATTAATATAGTATA+AGG + chr7_3:79645359-79645378 None:intergenic 15.0%
!! ATAAACAAGCTATATAAAAA+AGG + chr7_3:79645481-79645500 None:intergenic 15.0%
!! AAAGTTAATCATATTCATAT+AGG + chr7_3:79645996-79646015 None:intergenic 15.0%
!! GTATGATATTATAAAAGATA+AGG + chr7_3:79646031-79646050 None:intergenic 15.0%
!! ACAAGAATTAATATAGTATA+AGG + chr7_3:79645359-79645378 None:intergenic 15.0%
!! ATAAACAAGCTATATAAAAA+AGG + chr7_3:79645481-79645500 None:intergenic 15.0%
!! AAAGTTAATCATATTCATAT+AGG + chr7_3:79645996-79646015 None:intergenic 15.0%
!! GTATGATATTATAAAAGATA+AGG + chr7_3:79646031-79646050 None:intergenic 15.0%
!! TTTGAAAACCAATTATATGT+AGG + chr7_3:79645513-79645532 None:intergenic 20.0%
!! TTAATCATATTCATATAGGT+GGG + chr7_3:79645992-79646011 None:intergenic 20.0%
!! ATATCAAAGACTATTGTTAA+GGG - chr7_3:79646585-79646604 Msa1127940:intron 20.0%
!!! GTTCAATATTTATTTTCCTT+TGG - chr7_3:79646945-79646964 Msa1127940:exon 20.0%
!!! TTGTTATTTTTGCAATTATG+TGG - chr7_3:79647026-79647045 Msa1127940:five_prime_UTR 20.0%
!! TTTGAAAACCAATTATATGT+AGG + chr7_3:79645513-79645532 None:intergenic 20.0%
!! TTAATCATATTCATATAGGT+GGG + chr7_3:79645992-79646011 None:intergenic 20.0%
!! ATATCAAAGACTATTGTTAA+GGG - chr7_3:79646585-79646604 Msa1127940:intron 20.0%
!!! GTTCAATATTTATTTTCCTT+TGG - chr7_3:79646945-79646964 Msa1127940:exon 20.0%
!!! TTGTTATTTTTGCAATTATG+TGG - chr7_3:79647026-79647045 Msa1127940:five_prime_UTR 20.0%
! TCTTCTCACTTAAAATAAAG+TGG + chr7_3:79645334-79645353 None:intergenic 25.0%
! GTACTTAGCAACATTAATTA+TGG - chr7_3:79645776-79645795 Msa1127940:CDS 25.0%
! GGAAAAAGTGAAAATGAAAA+GGG + chr7_3:79645827-79645846 None:intergenic 25.0%
! GGATTGCATATAATGATTAA+GGG + chr7_3:79645848-79645867 None:intergenic 25.0%
! AGGATTGCATATAATGATTA+AGG + chr7_3:79645849-79645868 None:intergenic 25.0%
! TCAATAAAAAGCCATATCAA+AGG + chr7_3:79645939-79645958 None:intergenic 25.0%
! GTTAATCATATTCATATAGG+TGG + chr7_3:79645993-79646012 None:intergenic 25.0%
! CTTCAGAAAGATACTATAAT+TGG + chr7_3:79646056-79646075 None:intergenic 25.0%
! CAATTATAGTATCTTTCTGA+AGG - chr7_3:79646054-79646073 Msa1127940:CDS 25.0%
!! CATATTATTGATAGCATGAT+TGG - chr7_3:79646119-79646138 Msa1127940:CDS 25.0%
! TTCTTGTCTTACAATTCTTA+TGG - chr7_3:79646217-79646236 Msa1127940:intron 25.0%
! TTATGGTTGAATTATTGTGA+TGG - chr7_3:79646234-79646253 Msa1127940:intron 25.0%
! GATATCAAAGACTATTGTTA+AGG - chr7_3:79646584-79646603 Msa1127940:intron 25.0%
! CAAAGTTAAATAAAATGCAG+AGG + chr7_3:79646880-79646899 None:intergenic 25.0%
!! GTTGATTTACATTTCATGTT+TGG - chr7_3:79646899-79646918 Msa1127940:CDS 25.0%
!! TTTGGAACTCATAAAACAAT+TGG - chr7_3:79646917-79646936 Msa1127940:CDS 25.0%
! TTGGAACTCATAAAACAATT+GGG - chr7_3:79646918-79646937 Msa1127940:CDS 25.0%
! TACAAATTTCAATCAACCAA+AGG + chr7_3:79646964-79646983 None:intergenic 25.0%
! ACAGTTTAAATAAACGTGTA+CGG - chr7_3:79647084-79647103 Msa1127940:five_prime_UTR 25.0%
! TCTTCTCACTTAAAATAAAG+TGG + chr7_3:79645334-79645353 None:intergenic 25.0%
! GTACTTAGCAACATTAATTA+TGG - chr7_3:79645776-79645795 Msa1127940:CDS 25.0%
! GGAAAAAGTGAAAATGAAAA+GGG + chr7_3:79645827-79645846 None:intergenic 25.0%
! GGATTGCATATAATGATTAA+GGG + chr7_3:79645848-79645867 None:intergenic 25.0%
! AGGATTGCATATAATGATTA+AGG + chr7_3:79645849-79645868 None:intergenic 25.0%
! TCAATAAAAAGCCATATCAA+AGG + chr7_3:79645939-79645958 None:intergenic 25.0%
! GTTAATCATATTCATATAGG+TGG + chr7_3:79645993-79646012 None:intergenic 25.0%
! CTTCAGAAAGATACTATAAT+TGG + chr7_3:79646056-79646075 None:intergenic 25.0%
! CAATTATAGTATCTTTCTGA+AGG - chr7_3:79646054-79646073 Msa1127940:CDS 25.0%
!! CATATTATTGATAGCATGAT+TGG - chr7_3:79646119-79646138 Msa1127940:CDS 25.0%
! TTCTTGTCTTACAATTCTTA+TGG - chr7_3:79646217-79646236 Msa1127940:intron 25.0%
! TTATGGTTGAATTATTGTGA+TGG - chr7_3:79646234-79646253 Msa1127940:intron 25.0%
! GATATCAAAGACTATTGTTA+AGG - chr7_3:79646584-79646603 Msa1127940:intron 25.0%
! CAAAGTTAAATAAAATGCAG+AGG + chr7_3:79646880-79646899 None:intergenic 25.0%
!! GTTGATTTACATTTCATGTT+TGG - chr7_3:79646899-79646918 Msa1127940:CDS 25.0%
!! TTTGGAACTCATAAAACAAT+TGG - chr7_3:79646917-79646936 Msa1127940:CDS 25.0%
! TTGGAACTCATAAAACAATT+GGG - chr7_3:79646918-79646937 Msa1127940:CDS 25.0%
! TACAAATTTCAATCAACCAA+AGG + chr7_3:79646964-79646983 None:intergenic 25.0%
! ACAGTTTAAATAAACGTGTA+CGG - chr7_3:79647084-79647103 Msa1127940:five_prime_UTR 25.0%
ATTTATACCAAGAGAAGACT+TGG + chr7_3:79645411-79645430 None:intergenic 30.0%
! AATTATGAGTTGGAATGAAG+TGG + chr7_3:79645449-79645468 None:intergenic 30.0%
GAGCAATATGAATTATGAGT+TGG + chr7_3:79645459-79645478 None:intergenic 30.0%
TTGTCTTGCCTACATATAAT+TGG - chr7_3:79645502-79645521 Msa1127940:three_prime_UTR 30.0%
!!! AATTGGTTTTCAAAAGTCTC+CGG - chr7_3:79645519-79645538 Msa1127940:three_prime_UTR 30.0%
!! GCTTCATCATTTGTTATGAT+CGG + chr7_3:79645560-79645579 None:intergenic 30.0%
TTAATTATGGATCGAAAAGC+TGG - chr7_3:79645789-79645808 Msa1127940:CDS 30.0%
GGGAAAAAGTGAAAATGAAA+AGG + chr7_3:79645828-79645847 None:intergenic 30.0%
ATCCAACTAACTCTCTAATT+AGG - chr7_3:79645903-79645922 Msa1127940:CDS 30.0%
! CGATATACATACTTGTTTCT+TGG - chr7_3:79646185-79646204 Msa1127940:CDS 30.0%
TTGAAGGTCAATTAGATGTT+GGG - chr7_3:79646538-79646557 Msa1127940:intron 30.0%
GAAACATTTGTGTTTCCTAA+AGG - chr7_3:79646609-79646628 Msa1127940:intron 30.0%
ATTTGTGTTTCCTAAAGGAT+TGG - chr7_3:79646614-79646633 Msa1127940:intron 30.0%
! AAAATATTATCTGGAACAGG+TGG + chr7_3:79646747-79646766 None:intergenic 30.0%
! GTCAAAATATTATCTGGAAC+AGG + chr7_3:79646750-79646769 None:intergenic 30.0%
GCTTGAGTCAAAATATTATC+TGG + chr7_3:79646756-79646775 None:intergenic 30.0%
AAGTTCAGAAAATCAAGTCT+AGG - chr7_3:79646796-79646815 Msa1127940:intron 30.0%
TGGAACTCATAAAACAATTG+GGG - chr7_3:79646919-79646938 Msa1127940:CDS 30.0%
AAAATAACAAGCACGCATTA+GGG + chr7_3:79646991-79647010 None:intergenic 30.0%
ATTTATACCAAGAGAAGACT+TGG + chr7_3:79645411-79645430 None:intergenic 30.0%
! AATTATGAGTTGGAATGAAG+TGG + chr7_3:79645449-79645468 None:intergenic 30.0%
GAGCAATATGAATTATGAGT+TGG + chr7_3:79645459-79645478 None:intergenic 30.0%
TTGTCTTGCCTACATATAAT+TGG - chr7_3:79645502-79645521 Msa1127940:three_prime_UTR 30.0%
!!! AATTGGTTTTCAAAAGTCTC+CGG - chr7_3:79645519-79645538 Msa1127940:three_prime_UTR 30.0%
!! GCTTCATCATTTGTTATGAT+CGG + chr7_3:79645560-79645579 None:intergenic 30.0%
TTAATTATGGATCGAAAAGC+TGG - chr7_3:79645789-79645808 Msa1127940:CDS 30.0%
GGGAAAAAGTGAAAATGAAA+AGG + chr7_3:79645828-79645847 None:intergenic 30.0%
ATCCAACTAACTCTCTAATT+AGG - chr7_3:79645903-79645922 Msa1127940:CDS 30.0%
! CGATATACATACTTGTTTCT+TGG - chr7_3:79646185-79646204 Msa1127940:CDS 30.0%
TTGAAGGTCAATTAGATGTT+GGG - chr7_3:79646538-79646557 Msa1127940:intron 30.0%
GAAACATTTGTGTTTCCTAA+AGG - chr7_3:79646609-79646628 Msa1127940:intron 30.0%
ATTTGTGTTTCCTAAAGGAT+TGG - chr7_3:79646614-79646633 Msa1127940:intron 30.0%
! AAAATATTATCTGGAACAGG+TGG + chr7_3:79646747-79646766 None:intergenic 30.0%
! GTCAAAATATTATCTGGAAC+AGG + chr7_3:79646750-79646769 None:intergenic 30.0%
GCTTGAGTCAAAATATTATC+TGG + chr7_3:79646756-79646775 None:intergenic 30.0%
AAGTTCAGAAAATCAAGTCT+AGG - chr7_3:79646796-79646815 Msa1127940:intron 30.0%
TGGAACTCATAAAACAATTG+GGG - chr7_3:79646919-79646938 Msa1127940:CDS 30.0%
AAAATAACAAGCACGCATTA+GGG + chr7_3:79646991-79647010 None:intergenic 30.0%
AGTTGGAATGAAGTGGTAAT+GGG + chr7_3:79645442-79645461 None:intergenic 35.0%
TCGGTGACAAACAAATTAAC+CGG + chr7_3:79645541-79645560 None:intergenic 35.0%
! AAAAGCCATATCAAAGGTGT+TGG + chr7_3:79645933-79645952 None:intergenic 35.0%
TGGTTGAATTATTGTGATGG+TGG - chr7_3:79646237-79646256 Msa1127940:intron 35.0%
TTAACAGCGATTCTAGTGAA+TGG - chr7_3:79646285-79646304 Msa1127940:intron 35.0%
! AACATTGGCTAAGGTTACTA+AGG + chr7_3:79646403-79646422 None:intergenic 35.0%
!! GATTTTCTGAACATTGGCTA+AGG + chr7_3:79646412-79646431 None:intergenic 35.0%
GAGATTGTGTTTGTTCTTGA+AGG - chr7_3:79646522-79646541 Msa1127940:intron 35.0%
CTTGAAGGTCAATTAGATGT+TGG - chr7_3:79646537-79646556 Msa1127940:intron 35.0%
TGGAAATGAACCAATCCTTT+AGG + chr7_3:79646627-79646646 None:intergenic 35.0%
GTTCATTTCCAAAAGAACAG+TGG - chr7_3:79646636-79646655 Msa1127940:intron 35.0%
! GTACATAACCACTGTTCTTT+TGG + chr7_3:79646647-79646666 None:intergenic 35.0%
GGATTCAATAGTCAATTGCA+AGG - chr7_3:79646684-79646703 Msa1127940:intron 35.0%
CAATAGTCAATTGCAAGGAA+CGG - chr7_3:79646689-79646708 Msa1127940:intron 35.0%
GTAGAAGCAAACAAAGTAAG+AGG + chr7_3:79646723-79646742 None:intergenic 35.0%
TTGACTCAAGCATTCCAAAT+TGG - chr7_3:79646765-79646784 Msa1127940:intron 35.0%
! CTTGATTTTCTGAACTTCCT+TGG + chr7_3:79646793-79646812 None:intergenic 35.0%
AATCCTTGATCTCACTACTT+GGG + chr7_3:79646828-79646847 None:intergenic 35.0%
CAAAATAACAAGCACGCATT+AGG + chr7_3:79646992-79647011 None:intergenic 35.0%
!!! CTAATGCGTGCTTGTTATTT+TGG - chr7_3:79646990-79647009 Msa1127940:five_prime_UTR 35.0%
AGTTGGAATGAAGTGGTAAT+GGG + chr7_3:79645442-79645461 None:intergenic 35.0%
TCGGTGACAAACAAATTAAC+CGG + chr7_3:79645541-79645560 None:intergenic 35.0%
! AAAAGCCATATCAAAGGTGT+TGG + chr7_3:79645933-79645952 None:intergenic 35.0%
TGGTTGAATTATTGTGATGG+TGG - chr7_3:79646237-79646256 Msa1127940:intron 35.0%
TTAACAGCGATTCTAGTGAA+TGG - chr7_3:79646285-79646304 Msa1127940:intron 35.0%
! AACATTGGCTAAGGTTACTA+AGG + chr7_3:79646403-79646422 None:intergenic 35.0%
!! GATTTTCTGAACATTGGCTA+AGG + chr7_3:79646412-79646431 None:intergenic 35.0%
GAGATTGTGTTTGTTCTTGA+AGG - chr7_3:79646522-79646541 Msa1127940:intron 35.0%
CTTGAAGGTCAATTAGATGT+TGG - chr7_3:79646537-79646556 Msa1127940:intron 35.0%
TGGAAATGAACCAATCCTTT+AGG + chr7_3:79646627-79646646 None:intergenic 35.0%
GTTCATTTCCAAAAGAACAG+TGG - chr7_3:79646636-79646655 Msa1127940:intron 35.0%
! GTACATAACCACTGTTCTTT+TGG + chr7_3:79646647-79646666 None:intergenic 35.0%
GGATTCAATAGTCAATTGCA+AGG - chr7_3:79646684-79646703 Msa1127940:intron 35.0%
CAATAGTCAATTGCAAGGAA+CGG - chr7_3:79646689-79646708 Msa1127940:intron 35.0%
GTAGAAGCAAACAAAGTAAG+AGG + chr7_3:79646723-79646742 None:intergenic 35.0%
TTGACTCAAGCATTCCAAAT+TGG - chr7_3:79646765-79646784 Msa1127940:intron 35.0%
! CTTGATTTTCTGAACTTCCT+TGG + chr7_3:79646793-79646812 None:intergenic 35.0%
AATCCTTGATCTCACTACTT+GGG + chr7_3:79646828-79646847 None:intergenic 35.0%
CAAAATAACAAGCACGCATT+AGG + chr7_3:79646992-79647011 None:intergenic 35.0%
!!! CTAATGCGTGCTTGTTATTT+TGG - chr7_3:79646990-79647009 Msa1127940:five_prime_UTR 35.0%
GAGTTGGAATGAAGTGGTAA+TGG + chr7_3:79645443-79645462 None:intergenic 40.0%
ACAGAGGTCTTGAAGATTGT+CGG + chr7_3:79645634-79645653 None:intergenic 40.0%
GGCCTAATTAGAGAGTTAGT+TGG + chr7_3:79645908-79645927 None:intergenic 40.0%
!! GGAACCAAATGTGTTGTTTG+TGG + chr7_3:79646382-79646401 None:intergenic 40.0%
! TCCTGGGATTTTCTGAACAT+TGG + chr7_3:79646418-79646437 None:intergenic 40.0%
AGCATTCCAAATTGGTACCA+AGG - chr7_3:79646773-79646792 Msa1127940:intron 40.0%
GAACTTCCTTGGTACCAATT+TGG + chr7_3:79646782-79646801 None:intergenic 40.0%
CAATCCTTGATCTCACTACT+TGG + chr7_3:79646829-79646848 None:intergenic 40.0%
GAGTTGGAATGAAGTGGTAA+TGG + chr7_3:79645443-79645462 None:intergenic 40.0%
ACAGAGGTCTTGAAGATTGT+CGG + chr7_3:79645634-79645653 None:intergenic 40.0%
GGCCTAATTAGAGAGTTAGT+TGG + chr7_3:79645908-79645927 None:intergenic 40.0%
!! GGAACCAAATGTGTTGTTTG+TGG + chr7_3:79646382-79646401 None:intergenic 40.0%
! TCCTGGGATTTTCTGAACAT+TGG + chr7_3:79646418-79646437 None:intergenic 40.0%
AGCATTCCAAATTGGTACCA+AGG - chr7_3:79646773-79646792 Msa1127940:intron 40.0%
GAACTTCCTTGGTACCAATT+TGG + chr7_3:79646782-79646801 None:intergenic 40.0%
CAATCCTTGATCTCACTACT+TGG + chr7_3:79646829-79646848 None:intergenic 40.0%
TGGAAGAGAGACAGAAGACT+TGG + chr7_3:79645391-79645410 None:intergenic 45.0%
CTCTCTTCCAAGTCTTCTCT+TGG - chr7_3:79645401-79645420 Msa1127940:three_prime_UTR 45.0%
AAATGATGAAGCTCCTCGCA+GGG - chr7_3:79645568-79645587 Msa1127940:three_prime_UTR 45.0%
CAGAGGTCTTGAAGATTGTC+GGG + chr7_3:79645633-79645652 None:intergenic 45.0%
ATGTAACGGTACCAGAAGCA+AGG + chr7_3:79645665-79645684 None:intergenic 45.0%
GCCTACCAACACCTTTGATA+TGG - chr7_3:79645925-79645944 Msa1127940:CDS 45.0%
!! GCCATATCAAAGGTGTTGGT+AGG + chr7_3:79645929-79645948 None:intergenic 45.0%
GAAATCAGCTGCGGTTACAT+TGG + chr7_3:79646331-79646350 None:intergenic 45.0%
!! AATGTGTTGTTTGTGGCTCC+TGG + chr7_3:79646375-79646394 None:intergenic 45.0%
GGAGCCACAAACAACACATT+TGG - chr7_3:79646375-79646394 Msa1127940:intron 45.0%
GCCAATGTTCAGAAAATCCC+AGG - chr7_3:79646414-79646433 Msa1127940:intron 45.0%
!! CAACACACTTGGTGTGTCAT+TGG - chr7_3:79646440-79646459 Msa1127940:intron 45.0%
!! GCACGTATTGACTATGCTGT+AGG - chr7_3:79646462-79646481 Msa1127940:intron 45.0%
!! CGTATTGACTATGCTGTAGG+TGG - chr7_3:79646465-79646484 Msa1127940:intron 45.0%
ACACAATCTCAGTTGCACGT+GGG + chr7_3:79646512-79646531 None:intergenic 45.0%
AACACAATCTCAGTTGCACG+TGG + chr7_3:79646513-79646532 None:intergenic 45.0%
AATCCTGCAATTACTGCAGC+AGG + chr7_3:79646669-79646688 None:intergenic 45.0%
TGGAAGAGAGACAGAAGACT+TGG + chr7_3:79645391-79645410 None:intergenic 45.0%
CTCTCTTCCAAGTCTTCTCT+TGG - chr7_3:79645401-79645420 Msa1127940:three_prime_UTR 45.0%
AAATGATGAAGCTCCTCGCA+GGG - chr7_3:79645568-79645587 Msa1127940:three_prime_UTR 45.0%
CAGAGGTCTTGAAGATTGTC+GGG + chr7_3:79645633-79645652 None:intergenic 45.0%
ATGTAACGGTACCAGAAGCA+AGG + chr7_3:79645665-79645684 None:intergenic 45.0%
GCCTACCAACACCTTTGATA+TGG - chr7_3:79645925-79645944 Msa1127940:CDS 45.0%
!! GCCATATCAAAGGTGTTGGT+AGG + chr7_3:79645929-79645948 None:intergenic 45.0%
GAAATCAGCTGCGGTTACAT+TGG + chr7_3:79646331-79646350 None:intergenic 45.0%
!! AATGTGTTGTTTGTGGCTCC+TGG + chr7_3:79646375-79646394 None:intergenic 45.0%
GGAGCCACAAACAACACATT+TGG - chr7_3:79646375-79646394 Msa1127940:intron 45.0%
GCCAATGTTCAGAAAATCCC+AGG - chr7_3:79646414-79646433 Msa1127940:intron 45.0%
!! CAACACACTTGGTGTGTCAT+TGG - chr7_3:79646440-79646459 Msa1127940:intron 45.0%
!! GCACGTATTGACTATGCTGT+AGG - chr7_3:79646462-79646481 Msa1127940:intron 45.0%
!! CGTATTGACTATGCTGTAGG+TGG - chr7_3:79646465-79646484 Msa1127940:intron 45.0%
ACACAATCTCAGTTGCACGT+GGG + chr7_3:79646512-79646531 None:intergenic 45.0%
AACACAATCTCAGTTGCACG+TGG + chr7_3:79646513-79646532 None:intergenic 45.0%
AATCCTGCAATTACTGCAGC+AGG + chr7_3:79646669-79646688 None:intergenic 45.0%
!! ATTATTATTAATTAATGTAA+CGG + chr7_3:79645679-79645698 None:intergenic 5.0%
!! ATTATTATTAATTAATGTAA+CGG + chr7_3:79645679-79645698 None:intergenic 5.0%
CAAATGATGAAGCTCCTCGC+AGG - chr7_3:79645567-79645586 Msa1127940:three_prime_UTR 50.0%
AAGCAAGGTCTGCAACACAG+AGG + chr7_3:79645650-79645669 None:intergenic 50.0%
TGTGTTGCAGACCTTGCTTC+TGG - chr7_3:79645651-79645670 Msa1127940:three_prime_UTR 50.0%
! GTTGGTGGAGAAATCAGCTG+CGG + chr7_3:79646340-79646359 None:intergenic 50.0%
! TGGTTTGGCTAGTACGTTGG+TGG + chr7_3:79646355-79646374 None:intergenic 50.0%
ACCAACGTACTAGCCAAACC+AGG - chr7_3:79646354-79646373 Msa1127940:intron 50.0%
!! TCCTGGTTTGGCTAGTACGT+TGG + chr7_3:79646358-79646377 None:intergenic 50.0%
GTTGTTTGTGGCTCCTGGTT+TGG + chr7_3:79646370-79646389 None:intergenic 50.0%
ATCCCAGGACTCAACACACT+TGG - chr7_3:79646429-79646448 Msa1127940:intron 50.0%
CACCAAGTGTGTTGAGTCCT+GGG + chr7_3:79646434-79646453 None:intergenic 50.0%
ACACCAAGTGTGTTGAGTCC+TGG + chr7_3:79646435-79646454 None:intergenic 50.0%
GTACCTGCTGCAGTAATTGC+AGG - chr7_3:79646663-79646682 Msa1127940:intron 50.0%
GCACCCAAGTAGTGAGATCA+AGG - chr7_3:79646822-79646841 Msa1127940:intron 50.0%
CAAATGATGAAGCTCCTCGC+AGG - chr7_3:79645567-79645586 Msa1127940:three_prime_UTR 50.0%
AAGCAAGGTCTGCAACACAG+AGG + chr7_3:79645650-79645669 None:intergenic 50.0%
TGTGTTGCAGACCTTGCTTC+TGG - chr7_3:79645651-79645670 Msa1127940:three_prime_UTR 50.0%
! GTTGGTGGAGAAATCAGCTG+CGG + chr7_3:79646340-79646359 None:intergenic 50.0%
! TGGTTTGGCTAGTACGTTGG+TGG + chr7_3:79646355-79646374 None:intergenic 50.0%
ACCAACGTACTAGCCAAACC+AGG - chr7_3:79646354-79646373 Msa1127940:intron 50.0%
!! TCCTGGTTTGGCTAGTACGT+TGG + chr7_3:79646358-79646377 None:intergenic 50.0%
GTTGTTTGTGGCTCCTGGTT+TGG + chr7_3:79646370-79646389 None:intergenic 50.0%
ATCCCAGGACTCAACACACT+TGG - chr7_3:79646429-79646448 Msa1127940:intron 50.0%
CACCAAGTGTGTTGAGTCCT+GGG + chr7_3:79646434-79646453 None:intergenic 50.0%
ACACCAAGTGTGTTGAGTCC+TGG + chr7_3:79646435-79646454 None:intergenic 50.0%
GTACCTGCTGCAGTAATTGC+AGG - chr7_3:79646663-79646682 Msa1127940:intron 50.0%
GCACCCAAGTAGTGAGATCA+AGG - chr7_3:79646822-79646841 Msa1127940:intron 50.0%
GCTGCGGTTACATTGGAAGC+TGG + chr7_3:79646324-79646343 None:intergenic 55.0%
GCTGCGGTTACATTGGAAGC+TGG + chr7_3:79646324-79646343 None:intergenic 55.0%
CCAGAAGCAACAACCCTGCG+AGG + chr7_3:79645584-79645603 None:intergenic 60.0%
! CCTCGCAGGGTTGTTGCTTC+TGG - chr7_3:79645581-79645600 Msa1127940:three_prime_UTR 60.0%
GGGATCAGCAGTGACAGAGG+TGG + chr7_3:79645613-79645632 None:intergenic 60.0%
GTCGGGATCAGCAGTGACAG+AGG + chr7_3:79645616-79645635 None:intergenic 60.0%
CACGTGGGTGAGTGTGAGGT+GGG + chr7_3:79646497-79646516 None:intergenic 60.0%
GTTGCACGTGGGTGAGTGTG+AGG + chr7_3:79646501-79646520 None:intergenic 60.0%
CCAGAAGCAACAACCCTGCG+AGG + chr7_3:79645584-79645603 None:intergenic 60.0%
! CCTCGCAGGGTTGTTGCTTC+TGG - chr7_3:79645581-79645600 Msa1127940:three_prime_UTR 60.0%
GGGATCAGCAGTGACAGAGG+TGG + chr7_3:79645613-79645632 None:intergenic 60.0%
GTCGGGATCAGCAGTGACAG+AGG + chr7_3:79645616-79645635 None:intergenic 60.0%
CACGTGGGTGAGTGTGAGGT+GGG + chr7_3:79646497-79646516 None:intergenic 60.0%
GTTGCACGTGGGTGAGTGTG+AGG + chr7_3:79646501-79646520 None:intergenic 60.0%
GCACGTGGGTGAGTGTGAGG+TGG + chr7_3:79646498-79646517 None:intergenic 65.0%
GCACGTGGGTGAGTGTGAGG+TGG + chr7_3:79646498-79646517 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 79645323 79647201 79645323 ID=Msa1127940;Name=Msa1127940
chr7_3 mRNA 79645323 79647201 79645323 ID=Msa1127940-mRNA-1;Parent=Msa1127940;Name=Msa1127940-mRNA-1;_AED=0.03;_eAED=0.03;_QI=247|1|1|1|1|1|2|368|214
chr7_3 exon 79645323 79646232 79645323 ID=Msa1127940-mRNA-1:exon:22605;Parent=Msa1127940-mRNA-1
chr7_3 exon 79646852 79647201 79646852 ID=Msa1127940-mRNA-1:exon:22604;Parent=Msa1127940-mRNA-1
chr7_3 five_prime_UTR 79646955 79647201 79646955 ID=Msa1127940-mRNA-1:five_prime_utr;Parent=Msa1127940-mRNA-1
chr7_3 CDS 79646852 79646954 79646852 ID=Msa1127940-mRNA-1:cds;Parent=Msa1127940-mRNA-1
chr7_3 CDS 79645691 79646232 79645691 ID=Msa1127940-mRNA-1:cds;Parent=Msa1127940-mRNA-1
chr7_3 three_prime_UTR 79645323 79645690 79645323 ID=Msa1127940-mRNA-1:three_prime_utr;Parent=Msa1127940-mRNA-1
Gene Sequence

>Msa1127940

ATGATGAAGCTCCTCGCAGGGTTGTTGCTTCTGGTGTTAACCACCTCTGTCACTGCTGATCCCGACAATCTTCAAGACCTCTGTGTTGCAGACCTTGCTTCTGCGATTCTAGTGAATGGATTCACGTGCAAACCAGCTTCCAATGTAACCGCAGCTGATTTCTCCACCAACGTACTAGCCAAACCAGGAGCCACAAACAACACATTTGGTTCCTTAGTAACCTTAGCCAATGTTCAGAAAATCCCAGGACTCAACACACTTGGTGTGTCATTGGCACGTATTGACTATGCTGTAGGTGGACTGAACCCACCTCACACTCACCCACGTGCAACTGAGATTGTGTTTGTTCTTGAAGGTCAATTAGATGTTGGGTTTATTACAACAAATAATGTTTTGATATCAAAGACTATTGTTAAGGGTGAAACATTTGTGTTTCCTAAAGGATTGGTTCATTTCCAAAAGAACAGTGGTTATGTACCTGCTGCAGTAATTGCAGGATTCAATAGTCAATTGCAAGGAACGGTGAATATTCCTCTTACTTTGTTTGCTTCTACACCACCTGTTCCAGATAATATTTTGACTCAAGCATTCCAAATTGGTACCAAGGAAGTTCAGAAAATCAAGTCTAGGCTTGCACCCAAGTAG

Protein sequence

>Msa1127940

MMKLLAGLLLLVLTTSVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVFVLEGQLDVGFITTNNVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFASTPPVPDNILTQAFQIGTKEVQKIKSRLAPK*