AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1143790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143790 MtrunA17_Chr7g0251571 96.017 703 22 3 1 703 1 697 0.0 1366
Msa1143790 MtrunA17_Chr7g0251541 75.461 705 137 3 1 703 1 671 0.0 1069
Msa1143790 MtrunA17_Chr7g0251561 73.322 596 90 5 135 693 4 567 0.0 860
Msa1143790 MtrunA17_Chr7g0273621 54.397 614 273 4 93 702 104 714 0.0 661
Msa1143790 MtrunA17_Chr3g0138301 66.935 124 32 4 8 125 11 131 1.74e-40 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143790 AT5G41130.1 57.416 627 264 2 79 703 60 685 0.0 752
Msa1143790 AT5G41120.3 57.051 624 266 1 82 703 63 686 0.0 745
Msa1143790 AT5G41130.3 55.115 655 263 3 79 703 60 713 0.0 739
Msa1143790 AT5G41120.1 57.051 624 261 3 82 703 63 681 0.0 738
Msa1143790 AT5G41130.2 56.000 650 260 5 79 703 60 708 0.0 738
Msa1143790 AT3G02030.2 56.006 616 267 3 89 703 54 666 0.0 724
Msa1143790 AT3G26840.1 56.423 615 261 4 94 703 89 701 0.0 717
Msa1143790 AT3G02030.1 55.195 616 268 4 89 703 54 662 0.0 709
Msa1143790 AT5G41120.2 56.281 597 260 1 108 703 6 602 0.0 691
Msa1143790 AT1G54570.1 51.579 665 303 9 47 702 49 703 0.0 681
Msa1143790 AT3G26820.1 51.475 610 257 5 98 703 60 634 0.0 624
Msa1143790 AT3G26820.2 50.667 525 221 4 98 619 60 549 0.0 529

Find 210 sgRNAs with CRISPR-Local

Find 639 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCGATTCTACTATTATTT+TGG 0.124555 7_4:-19641244 Msa1143790:CDS
TATTGATCTTGTACTAATTT+TGG 0.137308 7_4:-19646971 Msa1143790:CDS
TATGGTTTCACTATAGTATT+AGG 0.145454 7_4:+19640594 None:intergenic
TCCTCTTATGCTCTTCTTAC+CGG 0.215995 7_4:-19649394 Msa1143790:CDS
GTTTGATTCTATTACTTCTT+TGG 0.217172 7_4:+19643153 None:intergenic
ACAAGATATATGGGCCTATT+TGG 0.226217 7_4:+19647048 None:intergenic
AGGGCCTCTGAGGCTGGTTT+TGG 0.229526 7_4:-19645294 Msa1143790:CDS
GAGCGGTTGGAAGGAATATT+TGG 0.243010 7_4:-19649505 Msa1143790:CDS
GAATTATTTCCAAATACTTC+TGG 0.274108 7_4:+19640542 None:intergenic
TATCTTGTTGGAGAATCTTT+AGG 0.281938 7_4:-19647033 Msa1143790:CDS
AGATTCTCCAACAAGATATA+TGG 0.288306 7_4:+19647038 None:intergenic
AGCACCAAAAGGTACGATTT+TGG 0.291222 7_4:+19641864 None:intergenic
ACATACACACCAGAAGTATT+TGG 0.293321 7_4:-19640551 None:intergenic
TTTGACACATTCAGAATTAT+GGG 0.295042 7_4:-19642724 Msa1143790:CDS
TGTAAATGTAATAAATGTTT+TGG 0.295922 7_4:+19649865 None:intergenic
TATTTCACATCATCAGAAAC+TGG 0.301590 7_4:-19647656 Msa1143790:CDS
ATCAGGATGGCAGCAAGATT+TGG 0.306081 7_4:-19641889 Msa1143790:CDS
GTGTCAAAAGAAGATATTTC+TGG 0.311359 7_4:+19642739 None:intergenic
CGGAACTCGGTCGACGGATA+TGG 0.315574 7_4:+19649650 None:intergenic
GTCCACTGTCATCAAATTTA+CGG 0.323014 7_4:+19643445 None:intergenic
CCAAACTTTACAGGGATTGA+TGG 0.327432 7_4:-19647694 Msa1143790:intron
GCGGATCGAACATCATTTAC+AGG 0.328023 7_4:-19647416 Msa1143790:intron
ATGGTGTTACGAGTTGTAAC+TGG 0.328519 7_4:+19646213 None:intergenic
CATTGTGCAGTTCTTCCTAT+AGG 0.336491 7_4:-19640764 Msa1143790:three_prime_UTR
TAGAATCGCCCTGGAACTTT+AGG 0.342609 7_4:+19641256 None:intergenic
GGTTGGTGGAGGAGAGTATT+CGG 0.347058 7_4:+19649952 None:intergenic
CTGAACAATCTGAGTTTATC+AGG 0.348316 7_4:-19641906 Msa1143790:CDS
GTGAAGAATACAAATTATTC+TGG 0.350619 7_4:-19641930 Msa1143790:CDS
CTATGAGCTATCATGCCTTC+AGG 0.355676 7_4:+19640797 None:intergenic
AAGGCAGGAGAGAGCGAGTC+AGG 0.360651 7_4:+19646176 None:intergenic
ATTACTTCTTTGGCTTCATA+AGG 0.361523 7_4:+19643163 None:intergenic
GATAGCATAAAGACGTGAAT+TGG 0.361808 7_4:+19644927 None:intergenic
AATACAGCAAGAGAGCTAAT+TGG 0.362339 7_4:-19645242 Msa1143790:CDS
GGAGCCAAAATCGTACCTTT+TGG 0.362674 7_4:-19641868 Msa1143790:CDS
AATATGAACGTTCACCAAAT+AGG 0.365153 7_4:-19647062 Msa1143790:CDS
GAAAGAAATATCCTTGTTAG+AGG 0.372246 7_4:-19642808 Msa1143790:CDS
CCTGTTGGCTAGGTAGTAAT+TGG 0.372519 7_4:+19643508 None:intergenic
TTCCACAAAAGTGTTTCTTT+TGG 0.374962 7_4:+19644982 None:intergenic
AACATAACAGCGGTAGATAC+TGG 0.375900 7_4:-19649986 Msa1143790:five_prime_UTR
AGGGATTGATGGCTTGGGAC+TGG 0.377756 7_4:-19647683 Msa1143790:CDS
TCCAACATTTGAAATTTGAT+TGG 0.380857 7_4:-19640923 Msa1143790:exon
GACATACCTGTTGTTTCAAT+TGG 0.388020 7_4:+19641217 None:intergenic
CTTTACAGGGATTGATGGCT+TGG 0.388141 7_4:-19647689 Msa1143790:intron
TTCTGTCTCTTGAACATCAT+AGG 0.389979 7_4:+19642775 None:intergenic
AATTTACGGAGCTCGCAATT+AGG 0.397424 7_4:+19643459 None:intergenic
CGCTGTAATGCTTTCAACCT+TGG 0.398930 7_4:-19642950 Msa1143790:CDS
TCTATTTCAGACTTAAAGTA+AGG 0.401097 7_4:+19641602 None:intergenic
GTTGGTGGAGGAGAGTATTC+GGG 0.402759 7_4:+19649953 None:intergenic
CATATCCGTCGACCGAGTTC+CGG 0.406419 7_4:-19649649 Msa1143790:CDS
GCGAGCCGCCACAGCTTCTC+AGG 0.411059 7_4:-19649716 Msa1143790:CDS
TTCATTTATTGCTAGCTGTT+GGG 0.411318 7_4:-19649841 Msa1143790:five_prime_UTR
TATAACAACACGTCTCTAAC+AGG 0.411356 7_4:-19650045 Msa1143790:five_prime_UTR
GAGCAAGCGAAGGAGTTTAT+CGG 0.418062 7_4:-19649483 Msa1143790:CDS
ACGATTGTAAAGGGACTTGC+TGG 0.418226 7_4:-19642919 Msa1143790:CDS
AGGATTGGAATTAGTTCCCT+TGG 0.419546 7_4:-19642848 Msa1143790:CDS
ACCAATCAAATTTCAAATGT+TGG 0.420485 7_4:+19640922 None:intergenic
TAAGAGACTAGAGACATATA+TGG 0.422632 7_4:+19640576 None:intergenic
CTTCATTTATTGCTAGCTGT+TGG 0.426465 7_4:-19649842 Msa1143790:five_prime_UTR
CTGAGAATGTTAGGCAAGGC+AGG 0.426867 7_4:+19646161 None:intergenic
GGAAAACCAATTGAAACAAC+AGG 0.429142 7_4:-19641223 Msa1143790:intron
GCTGTCAGACTGAGAATGTT+AGG 0.433586 7_4:+19646152 None:intergenic
CCCGGTAAGAAGAGCATAAG+AGG 0.434154 7_4:+19649393 None:intergenic
AAAAGCTTAAAGAGGTTAGT+TGG 0.434613 7_4:+19642685 None:intergenic
CTGATAAACTCAGATTGTTC+AGG 0.436965 7_4:+19641907 None:intergenic
AATGATGTTCGATCCGCAAC+TGG 0.437435 7_4:+19647422 None:intergenic
CCTCTTATGCTCTTCTTACC+GGG 0.437553 7_4:-19649393 Msa1143790:intron
ATGGTTTCACTATAGTATTA+GGG 0.440598 7_4:+19640595 None:intergenic
GGAACTTTAGGCAAAATTCC+AGG 0.442557 7_4:+19641268 None:intergenic
CGCCGTTGGAGTGTGGTTCG+CGG 0.442956 7_4:-19649428 Msa1143790:CDS
GCGCCGGCGGACGCCATGGC+GGG 0.443132 7_4:+19649777 None:intergenic
AAGAGGTTAGTTGGTGCTAC+AGG 0.444060 7_4:+19642694 None:intergenic
GCGGCTCGCGGCGGAAGAGA+GGG 0.446455 7_4:+19649730 None:intergenic
TTGTTTAACAGGAAGGAAAC+AGG 0.447144 7_4:-19641106 Msa1143790:intron
GAAAATTACCTAGGTTAGAA+AGG 0.448771 7_4:-19640863 Msa1143790:three_prime_UTR
ACAACTCGTAACACCATTGT+TGG 0.454613 7_4:-19646207 Msa1143790:CDS
GCATCCCTCCAGGATATAAC+AGG 0.457404 7_4:+19642644 None:intergenic
AAGAAGTAATAGAATCAAAC+AGG 0.458228 7_4:-19643150 Msa1143790:intron
GTTGGGTACCACATGTTGCT+AGG 0.459218 7_4:-19642868 Msa1143790:CDS
CTTTCACCTTCCTGTTGGCT+AGG 0.460615 7_4:+19643498 None:intergenic
GTACCACATGTTGCTAGGAT+TGG 0.461893 7_4:-19642863 Msa1143790:CDS
CCAATTACTACCTAGCCAAC+AGG 0.464648 7_4:-19643508 Msa1143790:CDS
GAGAAAACAATACCAGTAGT+AGG 0.466452 7_4:+19643418 None:intergenic
TATGAGCTATCATGCCTTCA+GGG 0.466500 7_4:+19640798 None:intergenic
AGAAGAGGATAGAAGAAATA+CGG 0.466666 7_4:-19649577 Msa1143790:CDS
GATTCTCCAACAAGATATAT+GGG 0.472347 7_4:+19647039 None:intergenic
GTAGTCTTTCACCTTCCTGT+TGG 0.474910 7_4:+19643493 None:intergenic
AAGGCATGATAGCTCATAGA+AGG 0.475497 7_4:-19640793 Msa1143790:three_prime_UTR
TTTAGGAGGGTGCCTCGCAC+TGG 0.475805 7_4:-19647016 Msa1143790:CDS
CTCAAACTTTGATACTCAGC+AGG 0.477620 7_4:-19644900 Msa1143790:intron
GGATGCGTGAGGCTCTTCAT+AGG 0.481595 7_4:-19642627 Msa1143790:CDS
CAGTGGACATTTCCTACTAC+TGG 0.481660 7_4:-19643430 Msa1143790:intron
CTCCCTTGAGGATGGTTACC+AGG 0.482485 7_4:+19643245 None:intergenic
GAAGAGAGGGGAGGAAACGC+CGG 0.486171 7_4:+19649743 None:intergenic
GGGATTGATGGCTTGGGACT+GGG 0.487489 7_4:-19647682 Msa1143790:CDS
TGGTACCCAACAAACAAAAC+AGG 0.489487 7_4:+19642880 None:intergenic
AGAAAGAGAGACGGAGCGGT+TGG 0.491606 7_4:-19649518 Msa1143790:CDS
TGTAATGCTTTCAACCTTGG+AGG 0.491650 7_4:-19642947 Msa1143790:CDS
TTCACCTCGGATTCAGAGAA+TGG 0.495484 7_4:-19649685 Msa1143790:CDS
GGCGGCTCGCGGCGGAAGAG+AGG 0.498527 7_4:+19649729 None:intergenic
GAGGATGGAACGATTGTAAA+GGG 0.498908 7_4:-19642928 Msa1143790:CDS
TGGCAGCTACTTCATTCAGC+AGG 0.499610 7_4:-19646238 Msa1143790:intron
TTTACAGGGATTGATGGCTT+GGG 0.500146 7_4:-19647688 Msa1143790:intron
CGAGACACTATACTTCTGTA+AGG 0.501205 7_4:+19640985 None:intergenic
GTTGGAGTGTGGTTCGCGGT+TGG 0.502183 7_4:-19649424 Msa1143790:CDS
AGAGAAGCGTTGGGAAGAGA+AGG 0.502831 7_4:-19649547 Msa1143790:CDS
TCACATGTCCTGTTATATCC+TGG 0.504779 7_4:-19642652 Msa1143790:CDS
AATAGGCCCATATATCTTGT+TGG 0.505582 7_4:-19647045 Msa1143790:CDS
AGAGAGACGGAGCGGTTGGA+AGG 0.509222 7_4:-19649514 Msa1143790:CDS
AGTGGCAAAGCATAGACATT+GGG 0.519004 7_4:-19650017 Msa1143790:five_prime_UTR
AATCTTGAAGCGTGTAAAGT+TGG 0.519498 7_4:-19640640 Msa1143790:three_prime_UTR
CGGTGGAGACAGAGAAGCGT+TGG 0.519977 7_4:-19649557 Msa1143790:CDS
AATCAACAAGTGCATATGCC+TGG 0.521515 7_4:-19641286 Msa1143790:CDS
CGGCTCGCGGCGGAAGAGAG+GGG 0.522786 7_4:+19649731 None:intergenic
TGGAAGATAAAAGCTTAAAG+AGG 0.525193 7_4:+19642677 None:intergenic
TCTTTGGCTTCATAAGGTGT+AGG 0.525363 7_4:+19643169 None:intergenic
AGAGCCTCACGCATCCCTCC+AGG 0.527791 7_4:+19642634 None:intergenic
ATGCTTTCAACCTTGGAGGA+TGG 0.530038 7_4:-19642943 Msa1143790:CDS
TTACAATTGTCGCCGGAACT+CGG 0.530521 7_4:+19649637 None:intergenic
AATTAGTTGAGAAAACAGTT+AGG 0.531353 7_4:-19647089 Msa1143790:CDS
CGAAACTTTGTCACCCGCCA+TGG 0.531398 7_4:-19649790 Msa1143790:exon
GGCTGGTGCTAGTGGTGAGG+TGG 0.533032 7_4:-19641311 Msa1143790:CDS
CTTGTTGGAGAATCTTTAGG+AGG 0.534475 7_4:-19647030 Msa1143790:CDS
AGAGGCGAAACGAGAAGAAG+AGG 0.540701 7_4:-19649592 Msa1143790:CDS
TCCTCAGTTACAATTGTCGC+CGG 0.543074 7_4:+19649630 None:intergenic
AACATTCTCAGTCTGACAGC+AGG 0.543399 7_4:-19646149 Msa1143790:intron
CTTGAAGCGTGTAAAGTTGG+AGG 0.543961 7_4:-19640637 Msa1143790:three_prime_UTR
CATGATAGCTCATAGAAGGT+TGG 0.544376 7_4:-19640789 Msa1143790:three_prime_UTR
ATTATAAATTCGAGAAACCA+AGG 0.546619 7_4:+19642831 None:intergenic
AAATAATAGTAGAATCGCCC+TGG 0.548512 7_4:+19641247 None:intergenic
AAAGTCTGCCTTTCTAACCT+AGG 0.549791 7_4:+19640855 None:intergenic
GTAAAGTTGGAGGGAGGTAT+CGG 0.551282 7_4:-19640627 Msa1143790:three_prime_UTR
ATATAACAGGACATGTGACT+TGG 0.551807 7_4:+19642657 None:intergenic
TACAATCGTTCCATCCTCCA+AGG 0.552792 7_4:+19642933 None:intergenic
AGCGCCGGCGGACGCCATGG+CGG 0.554592 7_4:+19649776 None:intergenic
TCTTCTCCAACAGCACCAAA+AGG 0.558469 7_4:+19641853 None:intergenic
CACATCATCAGAAACTGGGA+AGG 0.558593 7_4:-19647651 Msa1143790:intron
GGAGGATGGAACGATTGTAA+AGG 0.561696 7_4:-19642929 Msa1143790:CDS
GCTGTTGGAGAAGATGATCT+TGG 0.562041 7_4:-19641844 Msa1143790:CDS
GAAGCTGTGGCGGCTCGCGG+CGG 0.563769 7_4:+19649721 None:intergenic
TCGACGGATATGGCGAAGCG+CGG 0.565102 7_4:+19649660 None:intergenic
TTTGACCAAGAAAATTACCT+AGG 0.566268 7_4:-19640872 Msa1143790:three_prime_UTR
AAATCTAGGGCTGGTGCTAG+TGG 0.568736 7_4:-19641319 Msa1143790:intron
TGAGAAGCTGTGGCGGCTCG+CGG 0.569375 7_4:+19649718 None:intergenic
CTTGCTGGAATTCCTTCAGA+GGG 0.571046 7_4:-19642904 Msa1143790:CDS
ATGTAAAACCATGTGTAGCT+TGG 0.573546 7_4:+19640953 None:intergenic
TTGTTGGAGAATCTTTAGGA+GGG 0.574232 7_4:-19647029 Msa1143790:CDS
GCGTTGGGAAGAGAAGGAGG+AGG 0.576766 7_4:-19649541 Msa1143790:CDS
GATTTCCTGAGAAGCTGTGG+CGG 0.576856 7_4:+19649711 None:intergenic
TTACACGCTTCAAGATTCCA+TGG 0.578676 7_4:+19640646 None:intergenic
CAAACGAGGCTATGCAGTTG+AGG 0.580682 7_4:-19641571 Msa1143790:intron
GAGTTTATCGGAGCTGCTGA+CGG 0.582342 7_4:-19649471 Msa1143790:CDS
GGTGGAGACAGAGAAGCGTT+GGG 0.584059 7_4:-19649556 Msa1143790:CDS
TTACATTAGGAGGGCCTCTG+AGG 0.584141 7_4:-19645304 Msa1143790:intron
GAAGCGTTGGGAAGAGAAGG+AGG 0.587599 7_4:-19649544 Msa1143790:CDS
GCAGGAAGGCAGCATTGACC+TGG 0.588790 7_4:-19643263 Msa1143790:intron
TAGGGCTGGTGCTAGTGGTG+AGG 0.589170 7_4:-19641314 Msa1143790:CDS
AGAGGATAGAAGAAATACGG+TGG 0.590400 7_4:-19649574 Msa1143790:CDS
GGAATATTTGGAGCAAGCGA+AGG 0.594391 7_4:-19649493 Msa1143790:CDS
TGACCTGGTAACCATCCTCA+AGG 0.595560 7_4:-19643248 Msa1143790:CDS
TGTGATTGATTATGATGACT+TGG 0.596528 7_4:-19641633 Msa1143790:CDS
CTCGCGGCGGAAGAGAGGGG+AGG 0.597413 7_4:+19649734 None:intergenic
GTAAGAAGCTCCCTTGAGGA+TGG 0.598907 7_4:+19643237 None:intergenic
ATATCTTGAAGTGCAATCTG+AGG 0.602775 7_4:-19641052 Msa1143790:CDS
TGTCGCCGGAACTCGGTCGA+CGG 0.605240 7_4:+19649644 None:intergenic
AACAAAACAGGACCCTCTGA+AGG 0.606300 7_4:+19642892 None:intergenic
GTGCTTGCATATTCCAGTTG+CGG 0.606464 7_4:-19647435 Msa1143790:CDS
GCGTGAGGCTCTTCATAGGA+AGG 0.607196 7_4:-19642623 Msa1143790:intron
TTATTCTACCAAGCTACACA+TGG 0.608958 7_4:-19640961 Msa1143790:CDS
AGGAGGAGGAGAAAGAGAGA+CGG 0.609860 7_4:-19649527 Msa1143790:CDS
ACTTGCTGGAATTCCTTCAG+AGG 0.612101 7_4:-19642905 Msa1143790:CDS
AAGTGGCAAAGCATAGACAT+TGG 0.612184 7_4:-19650018 Msa1143790:five_prime_UTR
TGGTGTTACGAGTTGTAACT+GGG 0.612204 7_4:+19646214 None:intergenic
GACGGATATGGCGAAGCGCG+GGG 0.614032 7_4:+19649662 None:intergenic
TTTGATTTCCTGAGAAGCTG+TGG 0.617147 7_4:+19649708 None:intergenic
CTTACAGAAGTATAGTGTCT+CGG 0.619552 7_4:-19640984 Msa1143790:CDS
ACAATCTGAGTTTATCAGGA+TGG 0.620014 7_4:-19641902 Msa1143790:CDS
ATTTCACATCATCAGAAACT+GGG 0.622836 7_4:-19647655 Msa1143790:CDS
TTGAAGCGTGTAAAGTTGGA+GGG 0.623107 7_4:-19640636 Msa1143790:three_prime_UTR
TTTATCGGAGCTGCTGACGG+TGG 0.623928 7_4:-19649468 Msa1143790:CDS
GGGGCCATTCTCTGAATCCG+AGG 0.624339 7_4:+19649681 None:intergenic
TTGGCTTCATAAGGTGTAGG+CGG 0.624918 7_4:+19643172 None:intergenic
TCAGGAAATCAAATTCACCT+CGG 0.625452 7_4:-19649698 Msa1143790:CDS
ATGTCCTGTTATATCCTGGA+GGG 0.629187 7_4:-19642648 Msa1143790:CDS
AACCGCGAACCACACTCCAA+CGG 0.632073 7_4:+19649426 None:intergenic
TTAGTACAAGATCAATATCA+CGG 0.633196 7_4:+19646977 None:intergenic
TCAGGCAAAGTTTCCAACAA+TGG 0.636770 7_4:+19646194 None:intergenic
CTCCGTAAATTTGATGACAG+TGG 0.637460 7_4:-19643447 Msa1143790:CDS
GAGCTGCAACAGCCAGTGCG+AGG 0.638770 7_4:+19647004 None:intergenic
TTATAAATTCGAGAAACCAA+GGG 0.642809 7_4:+19642832 None:intergenic
TTATCCAAAACCAGCCTCAG+AGG 0.643378 7_4:+19645290 None:intergenic
GACCTGGTAACCATCCTCAA+GGG 0.659371 7_4:-19643247 Msa1143790:CDS
CATGTCCTGTTATATCCTGG+AGG 0.662328 7_4:-19642649 Msa1143790:CDS
ATATCCTGGAGGGATGCGTG+AGG 0.665086 7_4:-19642638 Msa1143790:CDS
CAGACTGAGAATGTTAGGCA+AGG 0.665768 7_4:+19646157 None:intergenic
TCCGGCGACAATTGTAACTG+AGG 0.668679 7_4:-19649631 Msa1143790:CDS
CATAGTCATGATACTTGCCA+CGG 0.669005 7_4:+19643209 None:intergenic
GATGTGCTATTCCTCTAACA+AGG 0.670143 7_4:+19642797 None:intergenic
GGAGAAAAGAACAACGACAG+AGG 0.670501 7_4:-19649610 Msa1143790:CDS
GAGGAGAAAGAGAGACGGAG+CGG 0.671066 7_4:-19649522 Msa1143790:CDS
GGTAGTAAGAAGCTCCCTTG+AGG 0.674200 7_4:+19643233 None:intergenic
ATTCCAATCCTAGCAACATG+TGG 0.689864 7_4:+19642860 None:intergenic
AACGGCGAAAACCACCGCGG+AGG 0.696752 7_4:+19649444 None:intergenic
CTGACGGTGGACCTCCGCGG+TGG 0.699075 7_4:-19649455 Msa1143790:CDS
AAGCGTGTAAAGTTGGAGGG+AGG 0.703494 7_4:-19640633 Msa1143790:three_prime_UTR
TTACTACCTAGCCAACAGGA+AGG 0.706722 7_4:-19643504 Msa1143790:CDS
ATACTCCAGATTGATTAATG+CGG 0.708885 7_4:-19642980 Msa1143790:intron
GGAGCTTCTTACTACCGCCG+TGG 0.715510 7_4:-19643226 Msa1143790:CDS
AGTCATGATACTTGCCACGG+CGG 0.728282 7_4:+19643212 None:intergenic
GGCAACGCACAACATAACAG+CGG 0.753199 7_4:-19649996 Msa1143790:five_prime_UTR
TCCAACGGCGAAAACCACCG+CGG 0.754753 7_4:+19649441 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATACATTCATATTAT+TGG - chr7_4:19641722-19641741 Msa1143790:intron 10.0%
!! TAAAAAATAAGTGAAATATA+TGG - chr7_4:19642509-19642528 Msa1143790:intron 10.0%
!!! GTTTATTTCATTTTATTTTA+AGG - chr7_4:19643073-19643092 Msa1143790:intron 10.0%
!! GAACAAATATATTTATTTAA+AGG + chr7_4:19646412-19646431 None:intergenic 10.0%
!! TTAAGTTAATGAATAAATTT+AGG + chr7_4:19647032-19647051 None:intergenic 10.0%
!!! ATTGATTTTATAATTCATTT+AGG - chr7_4:19648283-19648302 Msa1143790:intron 10.0%
!! TAACAAGTTATAAAAATAAA+TGG + chr7_4:19649179-19649198 None:intergenic 10.0%
!!! TGTAAATGTAATAAATGTTT+TGG + chr7_4:19640834-19640853 None:intergenic 15.0%
!!! AATCTGAATTATATCAATTT+TGG + chr7_4:19641920-19641939 None:intergenic 15.0%
!! TAGAATTTATTTATATGTGT+TGG + chr7_4:19642167-19642186 None:intergenic 15.0%
!!! TAACCTTTACTATATTTTAA+GGG + chr7_4:19642205-19642224 None:intergenic 15.0%
!!! AAAACTTTTGATATGTATTA+GGG - chr7_4:19642429-19642448 Msa1143790:intron 15.0%
!! TTTCTTTCATAAACTTTAAA+AGG + chr7_4:19642596-19642615 None:intergenic 15.0%
!! TAAAGTTTATGAAAGAAAAT+CGG - chr7_4:19642598-19642617 Msa1143790:intron 15.0%
!!! TATGTTCTAAGATTATAAAA+CGG - chr7_4:19642819-19642838 Msa1143790:CDS 15.0%
!! CTAATGGAAAAAAAAAAAAA+AGG + chr7_4:19643307-19643326 None:intergenic 15.0%
!! TAAATATTATATTGAGCTAA+TGG + chr7_4:19643323-19643342 None:intergenic 15.0%
!!! AATTAACTTGAATACTATTT+AGG + chr7_4:19644366-19644385 None:intergenic 15.0%
!!! TACTAAACATTTTTTTAAGA+TGG + chr7_4:19644656-19644675 None:intergenic 15.0%
!! AGTTATAATAAATTGTTTGT+TGG + chr7_4:19645955-19645974 None:intergenic 15.0%
!!! TAATACTTTTGACATTTTTT+AGG - chr7_4:19646806-19646825 Msa1143790:intron 15.0%
!!! TTTTAGAATTTTTTAAAGAC+TGG - chr7_4:19646840-19646859 Msa1143790:intron 15.0%
!!! TTTAGAATTTTTTAAAGACT+GGG - chr7_4:19646841-19646860 Msa1143790:intron 15.0%
!! AATTGTATATGTATTAAACT+GGG + chr7_4:19646880-19646899 None:intergenic 15.0%
!! AAATTGTATATGTATTAAAC+TGG + chr7_4:19646881-19646900 None:intergenic 15.0%
!!! ATAAGACAAATTTATTTTTC+AGG + chr7_4:19647145-19647164 None:intergenic 15.0%
!!! TTAATACTTGGTTATTTTTA+AGG - chr7_4:19648666-19648685 Msa1143790:intron 15.0%
!!! CGTATATATTTTTTTTGAAA+TGG - chr7_4:19649254-19649273 Msa1143790:intron 15.0%
!!! AATTTGTCATTTTTTATTCT+TGG - chr7_4:19650026-19650045 Msa1143790:five_prime_UTR 15.0%
!!! ATGTTTTTAGTAGAAAAATG+TGG + chr7_4:19640768-19640787 None:intergenic 20.0%
!! AATGTAAATGTATATCTTTC+CGG + chr7_4:19641478-19641497 None:intergenic 20.0%
!! ATTTGACCTTGAAATAAAAA+TGG - chr7_4:19641548-19641567 Msa1143790:intron 20.0%
!! TACTCTATAAATTTCAACTA+GGG + chr7_4:19641575-19641594 None:intergenic 20.0%
!! TTACTCTATAAATTTCAACT+AGG + chr7_4:19641576-19641595 None:intergenic 20.0%
!! AAAATTTCACTCTAATTAAG+TGG + chr7_4:19641789-19641808 None:intergenic 20.0%
!!! AATGAAACATTTTGAAAAAC+TGG - chr7_4:19641857-19641876 Msa1143790:CDS 20.0%
!! ATTATTGAATTAACCTAGTT+CGG - chr7_4:19641972-19641991 Msa1143790:intron 20.0%
!! AAGGAAAAAAACAAATAAAG+TGG + chr7_4:19642076-19642095 None:intergenic 20.0%
!!! AACCTTTACTATATTTTAAG+GGG + chr7_4:19642204-19642223 None:intergenic 20.0%
!!! GTAACCTTTACTATATTTTA+AGG + chr7_4:19642206-19642225 None:intergenic 20.0%
!!! CATATCAAAAGTTTTGATAT+TGG + chr7_4:19642424-19642443 None:intergenic 20.0%
!!! CAAAACTTTTGATATGTATT+AGG - chr7_4:19642428-19642447 Msa1143790:intron 20.0%
!!! CATAAACTTTAAAAGGAATT+TGG + chr7_4:19642589-19642608 None:intergenic 20.0%
!!! GATTAAAACTGATTTTCTAA+AGG + chr7_4:19642684-19642703 None:intergenic 20.0%
!!! GATACTCTATTTTTTAGATT+TGG + chr7_4:19642913-19642932 None:intergenic 20.0%
!!! CTAAAAAATAGAGTATCTAT+TGG - chr7_4:19642916-19642935 Msa1143790:CDS 20.0%
!! ATAATGATCAAATAAGAGAA+TGG + chr7_4:19643176-19643195 None:intergenic 20.0%
!!! TTTTTTTTATTTTGAAGGCT+AGG + chr7_4:19643396-19643415 None:intergenic 20.0%
!!! AAAACAGAGAAGAATTTTAA+TGG - chr7_4:19643419-19643438 Msa1143790:intron 20.0%
!!! ATCAAATTTTTGAAAATGCA+AGG + chr7_4:19643518-19643537 None:intergenic 20.0%
!!! TATTGATCTTGTACTAATTT+TGG - chr7_4:19643725-19643744 Msa1143790:intron 20.0%
!! TAAAAACTAAAAAGTTACCT+GGG + chr7_4:19643755-19643774 None:intergenic 20.0%
!! TTGTACAATATAATCAGTTT+CGG + chr7_4:19643803-19643822 None:intergenic 20.0%
!!! ACTAACTTCATTCATTTTTA+TGG + chr7_4:19643852-19643871 None:intergenic 20.0%
!! AGTGAATAAGTAATACAATA+TGG + chr7_4:19643899-19643918 None:intergenic 20.0%
!!! CAAGTATTTCATTTTCTTTA+GGG - chr7_4:19645247-19645266 Msa1143790:CDS 20.0%
!! TTTGCACTATATTGTAAATA+TGG - chr7_4:19646300-19646319 Msa1143790:intron 20.0%
!! CAAATTGAATATTGAATAGT+AGG - chr7_4:19646558-19646577 Msa1143790:intron 20.0%
!! CAAAAAAAAAAACTAACAGA+AGG + chr7_4:19646604-19646623 None:intergenic 20.0%
!!! TTTGTGTAAGACAAAATTTT+AGG + chr7_4:19646678-19646697 None:intergenic 20.0%
!!! AAAAGCAATGTTTTAAAAAC+CGG + chr7_4:19647003-19647022 None:intergenic 20.0%
!!! CATTAACTTAATTTGAATGA+TGG - chr7_4:19647041-19647060 Msa1143790:CDS 20.0%
!!! ATAATAAAGAGCATACTTAT+TGG + chr7_4:19648105-19648124 None:intergenic 20.0%
!! GTGTGAAATTTATATGAATT+TGG - chr7_4:19648241-19648260 Msa1143790:intron 20.0%
!! TGAAATTTATATGAATTTGG+CGG - chr7_4:19648244-19648263 Msa1143790:intron 20.0%
!!! ATTTAGGACAAAATAAGAAA+TGG - chr7_4:19648299-19648318 Msa1143790:intron 20.0%
!!! TATATTTTAAATGTACTACC+AGG - chr7_4:19648706-19648725 Msa1143790:intron 20.0%
!!! ATATTTTAAATGTACTACCA+GGG - chr7_4:19648707-19648726 Msa1143790:intron 20.0%
!! AAAAAAATAAAGCATGTGTA+TGG + chr7_4:19649342-19649361 None:intergenic 20.0%
!!! TGCTTTTTAATTTAACCTAT+AGG + chr7_4:19649950-19649969 None:intergenic 20.0%
!! AATGCAAAAAAATTAACGAT+TGG - chr7_4:19649973-19649992 Msa1143790:five_prime_UTR 20.0%
!! AAAAAAATTAACGATTGGAA+AGG - chr7_4:19649978-19649997 Msa1143790:five_prime_UTR 20.0%
!! TTTTAGTAGAAAAATGTGGT+TGG + chr7_4:19640764-19640783 None:intergenic 25.0%
!!! GTAATAAATGTTTTGGACTT+TGG + chr7_4:19640827-19640846 None:intergenic 25.0%
! CATTCAACAACAAAATGTAA+AGG + chr7_4:19641414-19641433 None:intergenic 25.0%
!! TTTTGTATTATAAGTTCACC+CGG - chr7_4:19641456-19641475 Msa1143790:intron 25.0%
! ATGTAAATGTATATCTTTCC+GGG + chr7_4:19641477-19641496 None:intergenic 25.0%
! ATAATTCAGATTTACAGTGT+AGG - chr7_4:19641928-19641947 Msa1143790:CDS 25.0%
! TAATTCAGATTTACAGTGTA+GGG - chr7_4:19641929-19641948 Msa1143790:CDS 25.0%
!!! ACCTTTACTATATTTTAAGG+GGG + chr7_4:19642203-19642222 None:intergenic 25.0%
!!! AACTCTTGTATTTTGTTTCA+TGG - chr7_4:19642283-19642302 Msa1143790:intron 25.0%
! TATAAGGACTAATTTCAACA+AGG + chr7_4:19642331-19642350 None:intergenic 25.0%
! CTTTGAACAAGGATTATATA+AGG + chr7_4:19642347-19642366 None:intergenic 25.0%
!!! TGATTTTAGTACTTTGAACA+AGG + chr7_4:19642358-19642377 None:intergenic 25.0%
! ATGTTTCAAAAACTATTTCC+AGG - chr7_4:19642381-19642400 Msa1143790:intron 25.0%
! TGTTTCAAAAACTATTTCCA+GGG - chr7_4:19642382-19642401 Msa1143790:intron 25.0%
! ATATGTATTAGGGACTAAAA+TGG - chr7_4:19642439-19642458 Msa1143790:intron 25.0%
! AAATCCTACAATCAAGAAAA+GGG + chr7_4:19643231-19643250 None:intergenic 25.0%
! AAAATCCTACAATCAAGAAA+AGG + chr7_4:19643232-19643251 None:intergenic 25.0%
!!! ATTGTAGGATTTTTGATTTG+TGG - chr7_4:19643239-19643258 Msa1143790:CDS 25.0%
! TTAATGGTTGTGATTAAAAC+TGG - chr7_4:19643435-19643454 Msa1143790:CDS 25.0%
!! TTTTCTCAACTAATTTCACA+AGG + chr7_4:19643602-19643621 None:intergenic 25.0%
! AATTAGTTGAGAAAACAGTT+AGG - chr7_4:19643607-19643626 Msa1143790:intron 25.0%
! TTAGTACAAGATCAATATCA+CGG + chr7_4:19643722-19643741 None:intergenic 25.0%
! CTAAAAACTAAAAAGTTACC+TGG + chr7_4:19643756-19643775 None:intergenic 25.0%
! GAAACTGATTATATTGTACA+AGG - chr7_4:19643802-19643821 Msa1143790:intron 25.0%
!! TGTACAAGGTTTTTAAACAA+AGG - chr7_4:19643816-19643835 Msa1143790:intron 25.0%
!!! AACTTCATTCATTTTTATGG+TGG + chr7_4:19643849-19643868 None:intergenic 25.0%
! TTAGTTGAACTTCAATGAAT+CGG - chr7_4:19643867-19643886 Msa1143790:intron 25.0%
!!! GTTTAGAGTTTTTATCATGT+TGG - chr7_4:19644102-19644121 Msa1143790:intron 25.0%
!!! TAACACATTTTTTTCATCGT+TGG + chr7_4:19644161-19644180 None:intergenic 25.0%
! ATTAGATCGTTTACGTAAAA+CGG - chr7_4:19644698-19644717 Msa1143790:intron 25.0%
!! AGTAGCAATTAGTTTAGAAA+AGG - chr7_4:19644724-19644743 Msa1143790:intron 25.0%
!! GTAGCAATTAGTTTAGAAAA+GGG - chr7_4:19644725-19644744 Msa1143790:intron 25.0%
!! TTTTCAATGCTTGAAATGAT+AGG - chr7_4:19644878-19644897 Msa1143790:intron 25.0%
!!! TAAGTCTTATGAGATTGTTT+TGG - chr7_4:19645026-19645045 Msa1143790:intron 25.0%
! TGGTCACTTAAATATTGTAT+AGG + chr7_4:19645140-19645159 None:intergenic 25.0%
!! GCAAGTATTTCATTTTCTTT+AGG - chr7_4:19645246-19645265 Msa1143790:CDS 25.0%
! AATGTAACAAGAATAGTTGA+AGG + chr7_4:19645379-19645398 None:intergenic 25.0%
! TCAACTATTCTTGTTACATT+AGG - chr7_4:19645379-19645398 Msa1143790:intron 25.0%
! AAACCATTTCATCATAAGTA+AGG - chr7_4:19646007-19646026 Msa1143790:intron 25.0%
! ATTCCTTACTTATGATGAAA+TGG + chr7_4:19646013-19646032 None:intergenic 25.0%
! ATTTCATCATAAGTAAGGAA+TGG - chr7_4:19646012-19646031 Msa1143790:intron 25.0%
! TTTCATCATAAGTAAGGAAT+GGG - chr7_4:19646013-19646032 Msa1143790:intron 25.0%
!! AATAATAAGTTGAACCAAAC+TGG + chr7_4:19646282-19646301 None:intergenic 25.0%
! CACTATATTGTAAATATGGT+GGG - chr7_4:19646304-19646323 Msa1143790:intron 25.0%
! TTTGTATATATACGAGTTCA+AGG + chr7_4:19646542-19646561 None:intergenic 25.0%
!!! TACAATTTTGTTATACAGAC+CGG - chr7_4:19646893-19646912 Msa1143790:intron 25.0%
!! GATATCAATTTTTCATCAGA+TGG + chr7_4:19647359-19647378 None:intergenic 25.0%
! GTTTGATTCTATTACTTCTT+TGG + chr7_4:19647546-19647565 None:intergenic 25.0%
! AAGAAGTAATAGAATCAAAC+AGG - chr7_4:19647546-19647565 Msa1143790:intron 25.0%
! TTATAAATTCGAGAAACCAA+GGG + chr7_4:19647867-19647886 None:intergenic 25.0%
! ATTATAAATTCGAGAAACCA+AGG + chr7_4:19647868-19647887 None:intergenic 25.0%
!! TTTTGACACATTCAGAATTA+TGG - chr7_4:19647971-19647990 Msa1143790:intron 25.0%
! TTTGACACATTCAGAATTAT+GGG - chr7_4:19647972-19647991 Msa1143790:intron 25.0%
!! TATGATTTTCGTATTTCTCA+TGG - chr7_4:19648122-19648141 Msa1143790:intron 25.0%
! GAAATTTATATGAATTTGGC+GGG - chr7_4:19648245-19648264 Msa1143790:intron 25.0%
!!! TGAGAAGGTATTTAGTATAT+TGG - chr7_4:19648406-19648425 Msa1143790:intron 25.0%
!!! TTTTAAGATTTCTGCATCAA+AGG - chr7_4:19648446-19648465 Msa1143790:intron 25.0%
! GGAATTTAATAGCATAATGT+TGG - chr7_4:19648472-19648491 Msa1143790:intron 25.0%
!!! TGGTTTTAAAAAAGAAAGTG+AGG - chr7_4:19648588-19648607 Msa1143790:intron 25.0%
! TTTAGTTAACACATTTAGTG+TGG - chr7_4:19648638-19648657 Msa1143790:intron 25.0%
! TTAGTTAACACATTTAGTGT+GGG - chr7_4:19648639-19648658 Msa1143790:intron 25.0%
! GTGAAGAATACAAATTATTC+TGG - chr7_4:19648766-19648785 Msa1143790:intron 25.0%
! TTATTATGGTATTCAAATCC+AGG + chr7_4:19649017-19649036 None:intergenic 25.0%
! AATGTGATATGCTGTTATTA+TGG + chr7_4:19649031-19649050 None:intergenic 25.0%
! TCTATTTCAGACTTAAAGTA+AGG + chr7_4:19649097-19649116 None:intergenic 25.0%
! AATAGAAAAACTTACAAACG+AGG - chr7_4:19649111-19649130 Msa1143790:intron 25.0%
!!! GTTTCATGATTTGGTAATTT+TGG + chr7_4:19649226-19649245 None:intergenic 25.0%
! GAAACAATTGTTTCATGATT+TGG + chr7_4:19649235-19649254 None:intergenic 25.0%
!! TTTTGCCAACAACAATTTAT+TGG - chr7_4:19649563-19649582 Msa1143790:CDS 25.0%
! TTTGCCAACAACAATTTATT+GGG - chr7_4:19649564-19649583 Msa1143790:CDS 25.0%
! ATATCCCAATAAATTGTTGT+TGG + chr7_4:19649571-19649590 None:intergenic 25.0%
! TTATTGGGATATTGTTTAAC+AGG - chr7_4:19649579-19649598 Msa1143790:CDS 25.0%
!! TCCAACATTTGAAATTTGAT+TGG - chr7_4:19649773-19649792 Msa1143790:CDS 25.0%
! ACCAATCAAATTTCAAATGT+TGG + chr7_4:19649777-19649796 None:intergenic 25.0%
!!! TGATTGGTTTGTACAAAAAT+TGG - chr7_4:19649789-19649808 Msa1143790:exon 25.0%
! ATGGTTTCACTATAGTATTA+GGG + chr7_4:19650104-19650123 None:intergenic 25.0%
! TATGGTTTCACTATAGTATT+AGG + chr7_4:19650105-19650124 None:intergenic 25.0%
TTCATTTATTGCTAGCTGTT+GGG - chr7_4:19640855-19640874 Msa1143790:three_prime_UTR 30.0%
AGAAGAGGATAGAAGAAATA+CGG - chr7_4:19641119-19641138 Msa1143790:intron 30.0%
GTAAAGGATGAAAACGAAAT+GGG + chr7_4:19641398-19641417 None:intergenic 30.0%
TGTAAAGGATGAAAACGAAA+TGG + chr7_4:19641399-19641418 None:intergenic 30.0%
!! TAGGGACCATTTTTATTTCA+AGG + chr7_4:19641557-19641576 None:intergenic 30.0%
! AGACAATGAATTGATTCAAG+TGG + chr7_4:19641816-19641835 None:intergenic 30.0%
TTTCTCCACTTCATAACTTA+CGG + chr7_4:19642039-19642058 None:intergenic 30.0%
!!! GTGCAATAAAGTGGTTTTAA+AGG + chr7_4:19642095-19642114 None:intergenic 30.0%
ATGATGAAGAAAACACATCA+AGG - chr7_4:19642140-19642159 Msa1143790:intron 30.0%
TGATGAAGAAAACACATCAA+GGG - chr7_4:19642141-19642160 Msa1143790:intron 30.0%
TCCCCCTTAAAATATAGTAA+AGG - chr7_4:19642199-19642218 Msa1143790:intron 30.0%
CACATTTCTACAAAGACAAA+GGG + chr7_4:19642228-19642247 None:intergenic 30.0%
! CAACAAGGATTAGTAATACA+CGG + chr7_4:19642316-19642335 None:intergenic 30.0%
TCAAATAGGATTACCTATTG+TGG + chr7_4:19642650-19642669 None:intergenic 30.0%
ATAGGTAATCCTATTTGAGA+CGG - chr7_4:19642652-19642671 Msa1143790:CDS 30.0%
TATTTCACATCATCAGAAAC+TGG - chr7_4:19643040-19643059 Msa1143790:intron 30.0%
ATTTCACATCATCAGAAACT+GGG - chr7_4:19643041-19643060 Msa1143790:intron 30.0%
CGTCAAATCAAATGTCAAAT+TGG + chr7_4:19643113-19643132 None:intergenic 30.0%
GAAGAAACTTGTCAAATAGA+AGG + chr7_4:19643145-19643164 None:intergenic 30.0%
!!! TTATTTTGAAGGCTAGGATT+TGG + chr7_4:19643390-19643409 None:intergenic 30.0%
GACAGAACAATAAATTATGC+TGG + chr7_4:19643562-19643581 None:intergenic 30.0%
AATATGAACGTTCACCAAAT+AGG - chr7_4:19643634-19643653 Msa1143790:intron 30.0%
GATTCTCCAACAAGATATAT+GGG + chr7_4:19643660-19643679 None:intergenic 30.0%
AGATTCTCCAACAAGATATA+TGG + chr7_4:19643661-19643680 None:intergenic 30.0%
TATCTTGTTGGAGAATCTTT+AGG - chr7_4:19643663-19643682 Msa1143790:intron 30.0%
TTATGAAATTCAGCAATGAC+AGG - chr7_4:19643947-19643966 Msa1143790:intron 30.0%
!! TATTTTGTTTGTCACTGACT+TGG - chr7_4:19644070-19644089 Msa1143790:intron 30.0%
!!! ATTTTGTTTGTCACTGACTT+GGG - chr7_4:19644071-19644090 Msa1143790:intron 30.0%
TTCAGAATGATACTGTTCAT+TGG - chr7_4:19644288-19644307 Msa1143790:intron 30.0%
ATGATACTGTTCATTGGAAA+TGG - chr7_4:19644294-19644313 Msa1143790:intron 30.0%
TCATAGAAACAACCTACAAA+TGG + chr7_4:19644799-19644818 None:intergenic 30.0%
! ACTTTTGCTTAGTCAATTGT+AGG - chr7_4:19644845-19644864 Msa1143790:intron 30.0%
CTGTTAATAAGACATGTCAA+TGG - chr7_4:19644927-19644946 Msa1143790:CDS 30.0%
TCATAAGACTTAAACCATGA+TGG + chr7_4:19645018-19645037 None:intergenic 30.0%
CGTGAAACATATATTGGTAA+CGG + chr7_4:19645065-19645084 None:intergenic 30.0%
! AAAAGGCGTGAAACATATAT+TGG + chr7_4:19645071-19645090 None:intergenic 30.0%
TATAGGAAAGAATGCAGAAA+GGG + chr7_4:19645123-19645142 None:intergenic 30.0%
TGAATATTATCAAGTGCTTG+AGG + chr7_4:19645301-19645320 None:intergenic 30.0%
ACTATTCTTGTTACATTAGG+AGG - chr7_4:19645382-19645401 Msa1143790:intron 30.0%
CTATTCTTGTTACATTAGGA+GGG - chr7_4:19645383-19645402 Msa1143790:intron 30.0%
AATCAGTTGATTGAATTCAC+AGG - chr7_4:19645674-19645693 Msa1143790:intron 30.0%
! TACCAAAAGAAACACTTTTG+TGG - chr7_4:19645712-19645731 Msa1143790:intron 30.0%
!!! TTCCACAAAAGTGTTTCTTT+TGG + chr7_4:19645717-19645736 None:intergenic 30.0%
AGAAATGCTTGTAGATGAAA+TGG - chr7_4:19645910-19645929 Msa1143790:intron 30.0%
!!! TTACGCAGTGTTTTAAAAAC+TGG - chr7_4:19646149-19646168 Msa1143790:intron 30.0%
GCACTATATTGTAAATATGG+TGG - chr7_4:19646303-19646322 Msa1143790:intron 30.0%
GAAAAAAACAAAGACGTGAT+TGG + chr7_4:19646481-19646500 None:intergenic 30.0%
!! ACAATTTTGTTATACAGACC+GGG - chr7_4:19646894-19646913 Msa1143790:intron 30.0%
TCTTATCATATGTCTTTCAG+TGG - chr7_4:19647159-19647178 Msa1143790:intron 30.0%
CTCCATTTCTATTTAAATGC+AGG - chr7_4:19647298-19647317 Msa1143790:intron 30.0%
TGCCTGCATTTAAATAGAAA+TGG + chr7_4:19647303-19647322 None:intergenic 30.0%
! ATTACTTCTTTGGCTTCATA+AGG + chr7_4:19647536-19647555 None:intergenic 30.0%
!! TCTGGAGTATTTCAAGTTAA+AGG + chr7_4:19647706-19647725 None:intergenic 30.0%
ATACTCCAGATTGATTAATG+CGG - chr7_4:19647716-19647735 Msa1143790:intron 30.0%
GAAAGAAATATCCTTGTTAG+AGG - chr7_4:19647888-19647907 Msa1143790:intron 30.0%
ATGTTCAAGAGACAGAAAAA+TGG - chr7_4:19647927-19647946 Msa1143790:intron 30.0%
TGTTCAAGAGACAGAAAAAT+GGG - chr7_4:19647928-19647947 Msa1143790:intron 30.0%
GTGTCAAAAGAAGATATTTC+TGG + chr7_4:19647960-19647979 None:intergenic 30.0%
AAAAGCTTAAAGAGGTTAGT+TGG + chr7_4:19648014-19648033 None:intergenic 30.0%
TGGAAGATAAAAGCTTAAAG+AGG + chr7_4:19648022-19648041 None:intergenic 30.0%
GAAATGGCATAAAATGTCAA+AGG - chr7_4:19648315-19648334 Msa1143790:intron 30.0%
!!! GTTTAGTTTTACGATTATGC+TGG + chr7_4:19648374-19648393 None:intergenic 30.0%
AACAAATTAGTTGACTGAGA+AGG - chr7_4:19648391-19648410 Msa1143790:intron 30.0%
ATTATGACATATCTGTGGTT+TGG - chr7_4:19648536-19648555 Msa1143790:intron 30.0%
TTATGACATATCTGTGGTTT+GGG - chr7_4:19648537-19648556 Msa1143790:intron 30.0%
! TTTAAAACCAGAGATATTCC+CGG + chr7_4:19648578-19648597 None:intergenic 30.0%
! GACCGTCATAATAATTTTCA+GGG - chr7_4:19648744-19648763 Msa1143790:intron 30.0%
CACCCTGAAAATTATTATGA+CGG + chr7_4:19648749-19648768 None:intergenic 30.0%
AGTAAAGGGTGAAAATTACT+TGG + chr7_4:19648878-19648897 None:intergenic 30.0%
GAATAACTAAGTAGAGGAAA+AGG + chr7_4:19648909-19648928 None:intergenic 30.0%
CAGAAAGAATAACTAAGTAG+AGG + chr7_4:19648915-19648934 None:intergenic 30.0%
TCTGAAAATACTTCCATTGA+AGG - chr7_4:19648931-19648950 Msa1143790:intron 30.0%
! TTTTCACATTTTGCCTTCAA+TGG + chr7_4:19648947-19648966 None:intergenic 30.0%
! TTTCATTTTCACAAGATCTG+CGG - chr7_4:19648981-19649000 Msa1143790:intron 30.0%
!!! GCATATCACATTGATTTTTC+AGG - chr7_4:19649039-19649058 Msa1143790:intron 30.0%
TGTGATTGATTATGATGACT+TGG - chr7_4:19649063-19649082 Msa1143790:intron 30.0%
AGCATGACACATTAACAAAA+TGG + chr7_4:19649319-19649338 None:intergenic 30.0%
CTAGATTTCACAATATACAC+GGG + chr7_4:19649365-19649384 None:intergenic 30.0%
CCTAGATTTCACAATATACA+CGG + chr7_4:19649366-19649385 None:intergenic 30.0%
CGTGTATATTGTGAAATCTA+GGG - chr7_4:19649364-19649383 Msa1143790:intron 30.0%
AGCAGTGAAATATATAAGCA+CGG + chr7_4:19649510-19649529 None:intergenic 30.0%
TGCTTATATATTTCACTGCT+AGG - chr7_4:19649510-19649529 Msa1143790:CDS 30.0%
TTTGACCAAGAAAATTACCT+AGG - chr7_4:19649824-19649843 Msa1143790:five_prime_UTR 30.0%
! TCTAACCTAGGTAATTTTCT+TGG + chr7_4:19649832-19649851 None:intergenic 30.0%
GAAAATTACCTAGGTTAGAA+AGG - chr7_4:19649833-19649852 Msa1143790:five_prime_UTR 30.0%
!! GTAATTTGCCTGTAGTTTTT+AGG - chr7_4:19649864-19649883 Msa1143790:five_prime_UTR 30.0%
!!! CATTTTTTATTCTTGGACCA+TGG - chr7_4:19650033-19650052 Msa1143790:five_prime_UTR 30.0%
TAAGAGACTAGAGACATATA+TGG + chr7_4:19650123-19650142 None:intergenic 30.0%
TATAACAACACGTCTCTAAC+AGG - chr7_4:19640651-19640670 Msa1143790:three_prime_UTR 35.0%
TAGTAGAAAAATGTGGTTGG+TGG + chr7_4:19640761-19640780 None:intergenic 35.0%
CTTCATTTATTGCTAGCTGT+TGG - chr7_4:19640854-19640873 Msa1143790:three_prime_UTR 35.0%
TCAGGAAATCAAATTCACCT+CGG - chr7_4:19640998-19641017 Msa1143790:CDS 35.0%
GTAGTAAAACAGAACTAACC+CGG + chr7_4:19641324-19641343 None:intergenic 35.0%
ATGTTTCATTGATGCTTACG+AGG + chr7_4:19641847-19641866 None:intergenic 35.0%
ATTTACAGTGTAGGGAACTA+AGG - chr7_4:19641937-19641956 Msa1143790:intron 35.0%
TCAGTGATATTTACCGAACT+AGG + chr7_4:19641988-19642007 None:intergenic 35.0%
TTCTCCACTTCATAACTTAC+GGG + chr7_4:19642038-19642057 None:intergenic 35.0%
CTTCATCATGTGCAATAAAG+TGG + chr7_4:19642104-19642123 None:intergenic 35.0%
CCACATTTCTACAAAGACAA+AGG + chr7_4:19642229-19642248 None:intergenic 35.0%
CCTTTGTCTTTGTAGAAATG+TGG - chr7_4:19642226-19642245 Msa1143790:intron 35.0%
GTCTTTGTAGAAATGTGGAA+AGG - chr7_4:19642231-19642250 Msa1143790:intron 35.0%
!!! GTTGTCTTTATTTTGAACCC+TGG + chr7_4:19642402-19642421 None:intergenic 35.0%
AATAGGATTACCTATTGTGG+AGG + chr7_4:19642647-19642666 None:intergenic 35.0%
! TAGGTAATCCTATTTGAGAC+GGG - chr7_4:19642653-19642672 Msa1143790:CDS 35.0%
AGCGTTGCATAATATCAAGA+TGG + chr7_4:19642793-19642812 None:intergenic 35.0%
!! TAGAGTATCTATTGGTGTCA+TGG - chr7_4:19642924-19642943 Msa1143790:CDS 35.0%
CTTGCATTCCAAACTTTACA+GGG - chr7_4:19642994-19643013 Msa1143790:intron 35.0%
! TGTTCCCTTTTCTTGATTGT+AGG - chr7_4:19643224-19643243 Msa1143790:CDS 35.0%
! AAAACCAGTGAAAAGTACAC+TGG - chr7_4:19643462-19643481 Msa1143790:CDS 35.0%
ACAAGATATATGGGCCTATT+TGG + chr7_4:19643651-19643670 None:intergenic 35.0%
AATAGGCCCATATATCTTGT+TGG - chr7_4:19643651-19643670 Msa1143790:intron 35.0%
! TTGTTGGAGAATCTTTAGGA+GGG - chr7_4:19643667-19643686 Msa1143790:intron 35.0%
GTGATGTAGATAAGATTGAC+TGG - chr7_4:19643775-19643794 Msa1143790:intron 35.0%
CCATATTCTTAAGCAACAAC+AGG + chr7_4:19644254-19644273 None:intergenic 35.0%
! CCTGTTGTTGCTTAAGAATA+TGG - chr7_4:19644251-19644270 Msa1143790:intron 35.0%
! GTTGTTGCTTAAGAATATGG+TGG - chr7_4:19644254-19644273 Msa1143790:intron 35.0%
CTGACCATGACTATCTAATT+TGG - chr7_4:19644438-19644457 Msa1143790:intron 35.0%
TCACTATTAAGACAACTGTC+TGG + chr7_4:19644822-19644841 None:intergenic 35.0%
CTTAGTCAATTGTAGGTTTC+TGG - chr7_4:19644852-19644871 Msa1143790:intron 35.0%
GGATGAATTCCATGAAAGTA+GGG + chr7_4:19644997-19645016 None:intergenic 35.0%
TGGATGAATTCCATGAAAGT+AGG + chr7_4:19644998-19645017 None:intergenic 35.0%
TTCATGGAATTCATCCATCA+TGG - chr7_4:19645001-19645020 Msa1143790:CDS 35.0%
GTATAGGAAAGAATGCAGAA+AGG + chr7_4:19645124-19645143 None:intergenic 35.0%
!!! AGGAAGTTTTGTTTCACTAG+TGG + chr7_4:19645160-19645179 None:intergenic 35.0%
TAGCAGAAGCAACAAAAGTA+AGG + chr7_4:19645180-19645199 None:intergenic 35.0%
! GTTGAAGGCATAAATGAGAA+AGG + chr7_4:19645364-19645383 None:intergenic 35.0%
!! GTTTTGGATAACTTCGTGAA+AGG - chr7_4:19645418-19645437 Msa1143790:intron 35.0%
!! TCTCTTGCTGTATTTTGTAG+AGG + chr7_4:19645448-19645467 None:intergenic 35.0%
AATACAGCAAGAGAGCTAAT+TGG - chr7_4:19645454-19645473 Msa1143790:intron 35.0%
CGTATGTGAATCATGTTAAC+TGG - chr7_4:19645555-19645574 Msa1143790:intron 35.0%
!! AACTGGACTTTTGAAGAACA+TGG - chr7_4:19645572-19645591 Msa1143790:intron 35.0%
!! TTTGCTTTTCTCTGGCTTAT+TGG - chr7_4:19645610-19645629 Msa1143790:intron 35.0%
GATAGCATAAAGACGTGAAT+TGG + chr7_4:19645772-19645791 None:intergenic 35.0%
CTATGCCATGATCTTTATGA+TGG - chr7_4:19645984-19646003 Msa1143790:intron 35.0%
GGTTTCCATCATAAAGATCA+TGG + chr7_4:19645992-19646011 None:intergenic 35.0%
AAGGAATGGGAAATTCTACT+TGG - chr7_4:19646026-19646045 Msa1143790:intron 35.0%
GTTCGTCATAATCTTGAAAG+TGG - chr7_4:19646048-19646067 Msa1143790:intron 35.0%
AAGGAATGGGAAATTCTACT+TGG + chr7_4:19646026-19646045 None:intergenic 35.0%
AAGCAATTGCAGTAAGGAAT+GGG + chr7_4:19646129-19646148 None:intergenic 35.0%
AAAGCAATTGCAGTAAGGAA+TGG + chr7_4:19646130-19646149 None:intergenic 35.0%
!!! GTTTTAAAAACTGGACTGAC+CGG - chr7_4:19646158-19646177 Msa1143790:CDS 35.0%
! TATTGGTCGGTTTAAATGCA+TGG + chr7_4:19646234-19646253 None:intergenic 35.0%
CATTTAAACCGACCAATATC+TGG - chr7_4:19646236-19646255 Msa1143790:intron 35.0%
AAAAAAAAACCGTAGCCTAG+TGG + chr7_4:19646377-19646396 None:intergenic 35.0%
TTACATCCAAAATGACACGA+GGG + chr7_4:19646515-19646534 None:intergenic 35.0%
ATTACATCCAAAATGACACG+AGG + chr7_4:19646516-19646535 None:intergenic 35.0%
! TGTATTAAACTGGGTTGAAC+TGG + chr7_4:19646871-19646890 None:intergenic 35.0%
!!! CAATGTTTTAAAAACCGGAC+CGG + chr7_4:19646998-19647017 None:intergenic 35.0%
GACTAATAGACTATCCATCA+CGG + chr7_4:19647071-19647090 None:intergenic 35.0%
TGTTGTGTACATGTGATAGT+AGG + chr7_4:19647097-19647116 None:intergenic 35.0%
GTCCACTGTCATCAAATTTA+CGG + chr7_4:19647254-19647273 None:intergenic 35.0%
GAGAAAACAATACCAGTAGT+AGG + chr7_4:19647281-19647300 None:intergenic 35.0%
TCATGCAACTCATCATGATA+AGG + chr7_4:19647589-19647608 None:intergenic 35.0%
!! GGAGTATTTCAAGTTAAAGG+TGG + chr7_4:19647703-19647722 None:intergenic 35.0%
TTCTGTCTCTTGAACATCAT+AGG + chr7_4:19647924-19647943 None:intergenic 35.0%
ATATAACAGGACATGTGACT+TGG + chr7_4:19648042-19648061 None:intergenic 35.0%
!! CTATATTCTGAGACTTGTCT+TGG - chr7_4:19648169-19648188 Msa1143790:intron 35.0%
GCATAAAATGTCAAAGGTCT+TGG - chr7_4:19648321-19648340 Msa1143790:intron 35.0%
!!! GGAAGTTAGAGCACTTTTTT+CGG - chr7_4:19648493-19648512 Msa1143790:intron 35.0%
!!! GAAGTTAGAGCACTTTTTTC+GGG - chr7_4:19648494-19648513 Msa1143790:intron 35.0%
TCTGGATTATGACATATCTG+TGG - chr7_4:19648531-19648550 Msa1143790:intron 35.0%
TATGACATATCTGTGGTTTG+GGG - chr7_4:19648538-19648557 Msa1143790:intron 35.0%
!! AGTGTGGGCATTTTAATACT+TGG - chr7_4:19648654-19648673 Msa1143790:intron 35.0%
! CGACCGTCATAATAATTTTC+AGG - chr7_4:19648743-19648762 Msa1143790:intron 35.0%
CTGATAAACTCAGATTGTTC+AGG + chr7_4:19648792-19648811 None:intergenic 35.0%
CTGAACAATCTGAGTTTATC+AGG - chr7_4:19648790-19648809 Msa1143790:intron 35.0%
ACAATCTGAGTTTATCAGGA+TGG - chr7_4:19648794-19648813 Msa1143790:intron 35.0%
!! AAAAGGATTGGCTGAGTAAA+GGG + chr7_4:19648892-19648911 None:intergenic 35.0%
ACTAAGTAGAGGAAAAGGAT+TGG + chr7_4:19648904-19648923 None:intergenic 35.0%
CCGTGTATATTGTGAAATCT+AGG - chr7_4:19649363-19649382 Msa1143790:intron 35.0%
! TATATTGTGAAATCTAGGGC+TGG - chr7_4:19649368-19649387 Msa1143790:intron 35.0%
! GAATTTTGCCTAAAGTTCCA+GGG - chr7_4:19649432-19649451 Msa1143790:CDS 35.0%
AAATAATAGTAGAATCGCCC+TGG + chr7_4:19649452-19649471 None:intergenic 35.0%
! GGGCGATTCTACTATTATTT+TGG - chr7_4:19649452-19649471 Msa1143790:CDS 35.0%
GGAAAACCAATTGAAACAAC+AGG - chr7_4:19649473-19649492 Msa1143790:CDS 35.0%
!! GACATACCTGTTGTTTCAAT+TGG + chr7_4:19649482-19649501 None:intergenic 35.0%
GAAATATATAAGCACGGACA+AGG + chr7_4:19649504-19649523 None:intergenic 35.0%
CTAGGAATACTCATGAAATG+TGG - chr7_4:19649528-19649547 Msa1143790:CDS 35.0%
TGGGATATTGTTTAACAGGA+AGG - chr7_4:19649583-19649602 Msa1143790:CDS 35.0%
TTGTTTAACAGGAAGGAAAC+AGG - chr7_4:19649590-19649609 Msa1143790:CDS 35.0%
ATATCTTGAAGTGCAATCTG+AGG - chr7_4:19649644-19649663 Msa1143790:CDS 35.0%
! CTTACAGAAGTATAGTGTCT+CGG - chr7_4:19649712-19649731 Msa1143790:CDS 35.0%
TTATTCTACCAAGCTACACA+TGG - chr7_4:19649735-19649754 Msa1143790:CDS 35.0%
ATGTAAAACCATGTGTAGCT+TGG + chr7_4:19649746-19649765 None:intergenic 35.0%
AACCAATGCCTAAAAACTAC+AGG + chr7_4:19649875-19649894 None:intergenic 35.0%
AATCTTGAAGCGTGTAAAGT+TGG - chr7_4:19650056-19650075 Msa1143790:five_prime_UTR 35.0%
CGTCTCTAACAGGAAAAAAG+TGG - chr7_4:19640661-19640680 Msa1143790:three_prime_UTR 40.0%
AAGTGGCAAAGCATAGACAT+TGG - chr7_4:19640678-19640697 Msa1143790:three_prime_UTR 40.0%
AGTGGCAAAGCATAGACATT+GGG - chr7_4:19640679-19640698 Msa1143790:three_prime_UTR 40.0%
AACATAACAGCGGTAGATAC+TGG - chr7_4:19640710-19640729 Msa1143790:three_prime_UTR 40.0%
!! TAGAAAAATGTGGTTGGTGG+AGG + chr7_4:19640758-19640777 None:intergenic 40.0%
! TTTGATTTCCTGAGAAGCTG+TGG + chr7_4:19640991-19641010 None:intergenic 40.0%
AGAGGATAGAAGAAATACGG+TGG - chr7_4:19641122-19641141 Msa1143790:intron 40.0%
TCCTCTTATGCTCTTCTTAC+CGG - chr7_4:19641302-19641321 Msa1143790:CDS 40.0%
CAAAACGCGTGTGTGAATAA+CGG + chr7_4:19641441-19641460 None:intergenic 40.0%
!! GGTGTTTTTCAGTAACCCAT+AGG - chr7_4:19642619-19642638 Msa1143790:intron 40.0%
! TAATCCTATTTGAGACGGGT+CGG - chr7_4:19642657-19642676 Msa1143790:CDS 40.0%
CTTGACCTTCCTTTACTGAT+AGG - chr7_4:19642885-19642904 Msa1143790:CDS 40.0%
! GATTTGGCTCCTATCAGTAA+AGG + chr7_4:19642897-19642916 None:intergenic 40.0%
GCTTGCATTCCAAACTTTAC+AGG - chr7_4:19642993-19643012 Msa1143790:intron 40.0%
CCATCAATCCCTGTAAAGTT+TGG + chr7_4:19643005-19643024 None:intergenic 40.0%
CCAAACTTTACAGGGATTGA+TGG - chr7_4:19643002-19643021 Msa1143790:intron 40.0%
! TTTACAGGGATTGATGGCTT+GGG - chr7_4:19643008-19643027 Msa1143790:intron 40.0%
TCAAATTGGTGAGTGCAGTT+AGG + chr7_4:19643099-19643118 None:intergenic 40.0%
AAGATAGTGTGAAGGGGAAA+TGG + chr7_4:19643495-19643514 None:intergenic 40.0%
TGCAAGGAAGATAGTGTGAA+GGG + chr7_4:19643502-19643521 None:intergenic 40.0%
ATGCAAGGAAGATAGTGTGA+AGG + chr7_4:19643503-19643522 None:intergenic 40.0%
CTGGAATACACAACTGAAAC+AGG + chr7_4:19643543-19643562 None:intergenic 40.0%
ATTTCACAAGGTCTGCAACA+GGG + chr7_4:19643590-19643609 None:intergenic 40.0%
AATTTCACAAGGTCTGCAAC+AGG + chr7_4:19643591-19643610 None:intergenic 40.0%
CTTGTTGGAGAATCTTTAGG+AGG - chr7_4:19643666-19643685 Msa1143790:intron 40.0%
!! GTACTAATTTTGGCAAACCC+AGG - chr7_4:19643735-19643754 Msa1143790:intron 40.0%
AACATATACTCACTCACACG+TGG + chr7_4:19643996-19644015 None:intergenic 40.0%
GTGAGAAGGATGATACAGTT+GGG + chr7_4:19644133-19644152 None:intergenic 40.0%
TGTGAGAAGGATGATACAGT+TGG + chr7_4:19644134-19644153 None:intergenic 40.0%
! CACTCAAAAAGCTCTAGTGA+AGG + chr7_4:19644337-19644356 None:intergenic 40.0%
!! CTTCACTAGAGCTTTTTGAG+TGG - chr7_4:19644335-19644354 Msa1143790:intron 40.0%
GCTGCCAAATTAGATAGTCA+TGG + chr7_4:19644445-19644464 None:intergenic 40.0%
!! TGGTGTTACGAGTTGTAACT+GGG + chr7_4:19644485-19644504 None:intergenic 40.0%
!! ATGGTGTTACGAGTTGTAAC+TGG + chr7_4:19644486-19644505 None:intergenic 40.0%
ACAACTCGTAACACCATTGT+TGG - chr7_4:19644489-19644508 Msa1143790:intron 40.0%
TCAGGCAAAGTTTCCAACAA+TGG + chr7_4:19644505-19644524 None:intergenic 40.0%
TGATCTGTGTCATGTGTGTT+TGG - chr7_4:19644621-19644640 Msa1143790:intron 40.0%
GATCTGTGTCATGTGTGTTT+GGG - chr7_4:19644622-19644641 Msa1143790:intron 40.0%
TGAAACAAACAAGCTGATGC+TGG - chr7_4:19644756-19644775 Msa1143790:intron 40.0%
GAAACAAACAAGCTGATGCT+GGG - chr7_4:19644757-19644776 Msa1143790:intron 40.0%
AAACAAACAAGCTGATGCTG+GGG - chr7_4:19644758-19644777 Msa1143790:intron 40.0%
! TACAAATGGAGCGTTTCACA+AGG + chr7_4:19644785-19644804 None:intergenic 40.0%
TTGTGAAACGCTCCATTTGT+AGG - chr7_4:19644784-19644803 Msa1143790:intron 40.0%
AGAGAAGTAAAGAGCTCAAG+AGG + chr7_4:19644909-19644928 None:intergenic 40.0%
GACAAAAAAGAACCAGAGAC+AGG + chr7_4:19645095-19645114 None:intergenic 40.0%
TATCAAGTGCTTGAGGATAC+TGG + chr7_4:19645294-19645313 None:intergenic 40.0%
TCTTCCTGTAAGTTTCAGAG+TGG - chr7_4:19645501-19645520 Msa1143790:intron 40.0%
!! GGACTTTTGAAGAACATGGT+TGG - chr7_4:19645576-19645595 Msa1143790:intron 40.0%
!! TGACTGCATTTGCTTTTCTC+TGG - chr7_4:19645602-19645621 Msa1143790:intron 40.0%
CTCAAACTTTGATACTCAGC+AGG - chr7_4:19645796-19645815 Msa1143790:intron 40.0%
CGTCATAATCTTGAAAGTGG+CGG - chr7_4:19646051-19646070 Msa1143790:intron 40.0%
GCGTAAAAGCAATTGCAGTA+AGG + chr7_4:19646135-19646154 None:intergenic 40.0%
ATACTGACCGAACCAGTAAT+AGG + chr7_4:19646201-19646220 None:intergenic 40.0%
!! TTGTAAATATGGTGGGTGCA+TGG - chr7_4:19646311-19646330 Msa1143790:intron 40.0%
ATCCCACAGATTCTGTGAAT+AGG - chr7_4:19646345-19646364 Msa1143790:intron 40.0%
AGCCTATTCACAGAATCTGT+GGG + chr7_4:19646350-19646369 None:intergenic 40.0%
AAGCCTATTCACAGAATCTG+TGG + chr7_4:19646351-19646370 None:intergenic 40.0%
AAAATGACACGAGGGTTTAC+AGG + chr7_4:19646507-19646526 None:intergenic 40.0%
!!! TGTAAACCCTCGTGTCATTT+TGG - chr7_4:19646506-19646525 Msa1143790:intron 40.0%
AATTTACGGAGCTCGCAATT+AGG + chr7_4:19647240-19647259 None:intergenic 40.0%
! CTCCGTAAATTTGATGACAG+TGG - chr7_4:19647249-19647268 Msa1143790:intron 40.0%
CATAGTCATGATACTTGCCA+CGG + chr7_4:19647490-19647509 None:intergenic 40.0%
! TCTTTGGCTTCATAAGGTGT+AGG + chr7_4:19647530-19647549 None:intergenic 40.0%
TGTGACCGCATTAATCAATC+TGG + chr7_4:19647724-19647743 None:intergenic 40.0%
TGTAATGCTTTCAACCTTGG+AGG - chr7_4:19647749-19647768 Msa1143790:intron 40.0%
GAGGATGGAACGATTGTAAA+GGG - chr7_4:19647768-19647787 Msa1143790:intron 40.0%
!!! AGGGTCCTGTTTTGTTTGTT+GGG - chr7_4:19647811-19647830 Msa1143790:intron 40.0%
TGGTACCCAACAAACAAAAC+AGG + chr7_4:19647819-19647838 None:intergenic 40.0%
ATTCCAATCCTAGCAACATG+TGG + chr7_4:19647839-19647858 None:intergenic 40.0%
AGGATTGGAATTAGTTCCCT+TGG - chr7_4:19647848-19647867 Msa1143790:intron 40.0%
! GATGTGCTATTCCTCTAACA+AGG + chr7_4:19647902-19647921 None:intergenic 40.0%
TCACATGTCCTGTTATATCC+TGG - chr7_4:19648044-19648063 Msa1143790:intron 40.0%
ATGTCCTGTTATATCCTGGA+GGG - chr7_4:19648048-19648067 Msa1143790:intron 40.0%
GAAGTCAACTGAGCGAATTT+GGG + chr7_4:19648150-19648169 None:intergenic 40.0%
AGAAGTCAACTGAGCGAATT+TGG + chr7_4:19648151-19648170 None:intergenic 40.0%
TTACCCAGCTGACTACATTT+AGG + chr7_4:19648204-19648223 None:intergenic 40.0%
TAAATGTAGTCAGCTGGGTA+AGG - chr7_4:19648203-19648222 Msa1143790:intron 40.0%
AGATTTCTGCATCAAAGGCT+TGG - chr7_4:19648451-19648470 Msa1143790:intron 40.0%
TGGGGTGACATATAAGATAC+CGG - chr7_4:19648556-19648575 Msa1143790:intron 40.0%
TAAGATACCGGGAATATCTC+TGG - chr7_4:19648568-19648587 Msa1143790:intron 40.0%
!! AGCACCAAAAGGTACGATTT+TGG + chr7_4:19648835-19648854 None:intergenic 40.0%
!! GAAAAGGATTGGCTGAGTAA+AGG + chr7_4:19648893-19648912 None:intergenic 40.0%
GGTATTCAAATCCAGGTTCA+AGG + chr7_4:19649010-19649029 None:intergenic 40.0%
AATCAACAAGTGCATATGCC+TGG - chr7_4:19649410-19649429 Msa1143790:CDS 40.0%
GGAACTTTAGGCAAAATTCC+AGG + chr7_4:19649431-19649450 None:intergenic 40.0%
! GGAATTTTGCCTAAAGTTCC+AGG - chr7_4:19649431-19649450 Msa1143790:CDS 40.0%
CGAGACACTATACTTCTGTA+AGG + chr7_4:19649714-19649733 None:intergenic 40.0%
AAAGTCTGCCTTTCTAACCT+AGG + chr7_4:19649844-19649863 None:intergenic 40.0%
!! TGCCTGTAGTTTTTAGGCAT+TGG - chr7_4:19649870-19649889 Msa1143790:five_prime_UTR 40.0%
TATGAGCTATCATGCCTTCA+GGG + chr7_4:19649901-19649920 None:intergenic 40.0%
AAGGCATGATAGCTCATAGA+AGG - chr7_4:19649903-19649922 Msa1143790:five_prime_UTR 40.0%
CATGATAGCTCATAGAAGGT+TGG - chr7_4:19649907-19649926 Msa1143790:five_prime_UTR 40.0%
CATTGTGCAGTTCTTCCTAT+AGG - chr7_4:19649932-19649951 Msa1143790:five_prime_UTR 40.0%
TTACACGCTTCAAGATTCCA+TGG + chr7_4:19650053-19650072 None:intergenic 40.0%
TTGAAGCGTGTAAAGTTGGA+GGG - chr7_4:19650060-19650079 Msa1143790:five_prime_UTR 40.0%
TTCACCTCGGATTCAGAGAA+TGG - chr7_4:19641011-19641030 Msa1143790:CDS 45.0%
TTACAATTGTCGCCGGAACT+CGG + chr7_4:19641062-19641081 None:intergenic 45.0%
TCCTCAGTTACAATTGTCGC+CGG + chr7_4:19641069-19641088 None:intergenic 45.0%
GGAGAAAAGAACAACGACAG+AGG - chr7_4:19641086-19641105 Msa1143790:CDS 45.0%
GAGCGGTTGGAAGGAATATT+TGG - chr7_4:19641191-19641210 Msa1143790:intron 45.0%
! GGAATATTTGGAGCAAGCGA+AGG - chr7_4:19641203-19641222 Msa1143790:intron 45.0%
GAGCAAGCGAAGGAGTTTAT+CGG - chr7_4:19641213-19641232 Msa1143790:intron 45.0%
CCTCTTATGCTCTTCTTACC+GGG - chr7_4:19641303-19641322 Msa1143790:CDS 45.0%
CCTATTGTGGAGGAACCTAT+GGG + chr7_4:19642637-19642656 None:intergenic 45.0%
ACCTATTGTGGAGGAACCTA+TGG + chr7_4:19642638-19642657 None:intergenic 45.0%
! AATCCTATTTGAGACGGGTC+GGG - chr7_4:19642658-19642677 Msa1143790:CDS 45.0%
TGGCTCCTATCAGTAAAGGA+AGG + chr7_4:19642893-19642912 None:intergenic 45.0%
! CTTTACAGGGATTGATGGCT+TGG - chr7_4:19643007-19643026 Msa1143790:intron 45.0%
CACATCATCAGAAACTGGGA+AGG - chr7_4:19643045-19643064 Msa1143790:intron 45.0%
GTGCTTGCATATTCCAGTTG+CGG - chr7_4:19643261-19643280 Msa1143790:CDS 45.0%
AATGATGTTCGATCCGCAAC+TGG + chr7_4:19643277-19643296 None:intergenic 45.0%
GCGGATCGAACATCATTTAC+AGG - chr7_4:19643280-19643299 Msa1143790:intron 45.0%
CATGTTGAACTCCTTCACAC+AGG - chr7_4:19643348-19643367 Msa1143790:intron 45.0%
TTTGAAGGCTAGGATTTGGC+TGG + chr7_4:19643386-19643405 None:intergenic 45.0%
! CCTTCCAGTGTACTTTTCAC+TGG + chr7_4:19643469-19643488 None:intergenic 45.0%
! CCAGTGAAAAGTACACTGGA+AGG - chr7_4:19643466-19643485 Msa1143790:CDS 45.0%
GCAAGGAAGATAGTGTGAAG+GGG + chr7_4:19643501-19643520 None:intergenic 45.0%
! CATCGTTGGAAAGTGTGAGA+AGG + chr7_4:19644147-19644166 None:intergenic 45.0%
CTTTGTGCAGGCTAAAGCTT+TGG + chr7_4:19644228-19644247 None:intergenic 45.0%
AACAACAGGCATCTTTGTGC+AGG + chr7_4:19644240-19644259 None:intergenic 45.0%
CAGACTGAGAATGTTAGGCA+AGG + chr7_4:19644542-19644561 None:intergenic 45.0%
GCTGTCAGACTGAGAATGTT+AGG + chr7_4:19644547-19644566 None:intergenic 45.0%
AACATTCTCAGTCTGACAGC+AGG - chr7_4:19644547-19644566 Msa1143790:intron 45.0%
TGCATGCATCCCTACTTTCA+TGG - chr7_4:19644985-19645004 Msa1143790:CDS 45.0%
AAGAACCAGAGACAGGCAAA+AGG + chr7_4:19645088-19645107 None:intergenic 45.0%
TTATCCAAAACCAGCCTCAG+AGG + chr7_4:19645409-19645428 None:intergenic 45.0%
!! CACACCACTCTGAAACTTAC+AGG + chr7_4:19645508-19645527 None:intergenic 45.0%
! AACCGGACCTATTACTGGTT+CGG - chr7_4:19646191-19646210 Msa1143790:CDS 45.0%
! GGTCGGTTTAAATGCATGGA+GGG + chr7_4:19646230-19646249 None:intergenic 45.0%
! TGGTCGGTTTAAATGCATGG+AGG + chr7_4:19646231-19646250 None:intergenic 45.0%
CGGTCTAACCAGATATTGGT+CGG + chr7_4:19646247-19646266 None:intergenic 45.0%
CGACCAATATCTGGTTAGAC+CGG - chr7_4:19646245-19646264 Msa1143790:intron 45.0%
GAACCAAACTGGCATGATTC+TGG + chr7_4:19646271-19646290 None:intergenic 45.0%
TTCACAGAATCTGTGGGATG+CGG + chr7_4:19646344-19646363 None:intergenic 45.0%
ACTGGTTGAACAGGATGACT+CGG + chr7_4:19646928-19646947 None:intergenic 45.0%
! TGAATGATGGAACTCCGTGA+TGG - chr7_4:19647054-19647073 Msa1143790:CDS 45.0%
! CCTGTTGGCTAGGTAGTAAT+TGG + chr7_4:19647191-19647210 None:intergenic 45.0%
CCAATTACTACCTAGCCAAC+AGG - chr7_4:19647188-19647207 Msa1143790:intron 45.0%
TTACTACCTAGCCAACAGGA+AGG - chr7_4:19647192-19647211 Msa1143790:intron 45.0%
GTAGTCTTTCACCTTCCTGT+TGG + chr7_4:19647206-19647225 None:intergenic 45.0%
CAGTGGACATTTCCTACTAC+TGG - chr7_4:19647266-19647285 Msa1143790:intron 45.0%
GTTTGTCTGTGTTAGCGTTC+CGG - chr7_4:19647324-19647343 Msa1143790:intron 45.0%
CATCAGATGGTGATTCATGC+CGG + chr7_4:19647346-19647365 None:intergenic 45.0%
TTGGCTTCATAAGGTGTAGG+CGG + chr7_4:19647527-19647546 None:intergenic 45.0%
CGCTGTAATGCTTTCAACCT+TGG - chr7_4:19647746-19647765 Msa1143790:intron 45.0%
ATGCTTTCAACCTTGGAGGA+TGG - chr7_4:19647753-19647772 Msa1143790:intron 45.0%
TACAATCGTTCCATCCTCCA+AGG + chr7_4:19647766-19647785 None:intergenic 45.0%
GGAGGATGGAACGATTGTAA+AGG - chr7_4:19647767-19647786 Msa1143790:intron 45.0%
ACGATTGTAAAGGGACTTGC+TGG - chr7_4:19647777-19647796 Msa1143790:intron 45.0%
! ACTTGCTGGAATTCCTTCAG+AGG - chr7_4:19647791-19647810 Msa1143790:intron 45.0%
CTTGCTGGAATTCCTTCAGA+GGG - chr7_4:19647792-19647811 Msa1143790:intron 45.0%
AACAAAACAGGACCCTCTGA+AGG + chr7_4:19647807-19647826 None:intergenic 45.0%
!!! GAGGGTCCTGTTTTGTTTGT+TGG - chr7_4:19647810-19647829 Msa1143790:intron 45.0%
GTACCACATGTTGCTAGGAT+TGG - chr7_4:19647833-19647852 Msa1143790:intron 45.0%
!! AAGAGGTTAGTTGGTGCTAC+AGG + chr7_4:19648005-19648024 None:intergenic 45.0%
CATGTCCTGTTATATCCTGG+AGG - chr7_4:19648047-19648066 Msa1143790:intron 45.0%
TGCACCTAAATGTAGTCAGC+TGG - chr7_4:19648197-19648216 Msa1143790:intron 45.0%
GCACCTAAATGTAGTCAGCT+GGG - chr7_4:19648198-19648217 Msa1143790:intron 45.0%
GTCAAAGGTCTTGGAAATGC+TGG - chr7_4:19648330-19648349 Msa1143790:intron 45.0%
!!! TTTTTTCGGGCAGTGTCTGA+TGG - chr7_4:19648507-19648526 Msa1143790:intron 45.0%
GGGGTGACATATAAGATACC+GGG - chr7_4:19648557-19648576 Msa1143790:intron 45.0%
GTCGAGATGTTAAATGACCC+TGG + chr7_4:19648727-19648746 None:intergenic 45.0%
ATCAGGATGGCAGCAAGATT+TGG - chr7_4:19648807-19648826 Msa1143790:intron 45.0%
! GGAGCCAAAATCGTACCTTT+TGG - chr7_4:19648828-19648847 Msa1143790:intron 45.0%
!!! ATCGTACCTTTTGGTGCTGT+TGG - chr7_4:19648837-19648856 Msa1143790:intron 45.0%
TCTTCTCCAACAGCACCAAA+AGG + chr7_4:19648846-19648865 None:intergenic 45.0%
GCTGTTGGAGAAGATGATCT+TGG - chr7_4:19648852-19648871 Msa1143790:intron 45.0%
TAGAATCGCCCTGGAACTTT+AGG + chr7_4:19649443-19649462 None:intergenic 45.0%
CTATGAGCTATCATGCCTTC+AGG + chr7_4:19649902-19649921 None:intergenic 45.0%
CTTGAAGCGTGTAAAGTTGG+AGG - chr7_4:19650059-19650078 Msa1143790:five_prime_UTR 45.0%
! GTAAAGTTGGAGGGAGGTAT+CGG - chr7_4:19650069-19650088 Msa1143790:five_prime_UTR 45.0%
!!! AATTTTTTTATAATTCAAAT+TGG - chr7_4:19640602-19640621 Msa1143790:three_prime_UTR 5.0%
!! TTAAATTAAGATTAATTAAA+CGG + chr7_4:19641346-19641365 None:intergenic 5.0%
!! TAATTTAATTATTCTATTAA+TGG - chr7_4:19641358-19641377 Msa1143790:intron 5.0%
!!! TTTTATTTTTTTTATTTTGA+AGG + chr7_4:19643401-19643420 None:intergenic 5.0%
GGCAACGCACAACATAACAG+CGG - chr7_4:19640700-19640719 Msa1143790:three_prime_UTR 50.0%
!! GTTGGTGGAGGAGAGTATTC+GGG + chr7_4:19640746-19640765 None:intergenic 50.0%
!! GGTTGGTGGAGGAGAGTATT+CGG + chr7_4:19640747-19640766 None:intergenic 50.0%
GATTTCCTGAGAAGCTGTGG+CGG + chr7_4:19640988-19641007 None:intergenic 50.0%
TCCGGCGACAATTGTAACTG+AGG - chr7_4:19641065-19641084 Msa1143790:CDS 50.0%
AGAGGCGAAACGAGAAGAAG+AGG - chr7_4:19641104-19641123 Msa1143790:intron 50.0%
!! AGAGAAGCGTTGGGAAGAGA+AGG - chr7_4:19641149-19641168 Msa1143790:intron 50.0%
AGGAGGAGGAGAAAGAGAGA+CGG - chr7_4:19641169-19641188 Msa1143790:intron 50.0%
GAGTTTATCGGAGCTGCTGA+CGG - chr7_4:19641225-19641244 Msa1143790:CDS 50.0%
! CCCGGTAAGAAGAGCATAAG+AGG + chr7_4:19641306-19641325 None:intergenic 50.0%
ATGCAAAGTGACACCGCATG+TGG - chr7_4:19642012-19642031 Msa1143790:intron 50.0%
CATAACTTACGGGCCACATG+CGG + chr7_4:19642028-19642047 None:intergenic 50.0%
GTGGCCCGTAAGTTATGAAG+TGG - chr7_4:19642031-19642050 Msa1143790:intron 50.0%
CCCATAGGTTCCTCCACAAT+AGG - chr7_4:19642634-19642653 Msa1143790:CDS 50.0%
TGAACTCCTTCACACAGGAG+CGG - chr7_4:19643353-19643372 Msa1143790:intron 50.0%
TGGCAGCTACTTCATTCAGC+AGG - chr7_4:19644458-19644477 Msa1143790:intron 50.0%
CTGAGAATGTTAGGCAAGGC+AGG + chr7_4:19644538-19644557 None:intergenic 50.0%
AGTGCTTGAGGATACTGGAG+TGG + chr7_4:19645289-19645308 None:intergenic 50.0%
TTACATTAGGAGGGCCTCTG+AGG - chr7_4:19645392-19645411 Msa1143790:intron 50.0%
GACCGAACCAGTAATAGGTC+CGG + chr7_4:19646196-19646215 None:intergenic 50.0%
TGGCCGGTCTAACCAGATAT+TGG + chr7_4:19646251-19646270 None:intergenic 50.0%
CAAACTGGCATGATTCTGGC+CGG + chr7_4:19646267-19646286 None:intergenic 50.0%
TCACAGAATCTGTGGGATGC+GGG + chr7_4:19646343-19646362 None:intergenic 50.0%
GTGAATAGGCTTTCGCCACT+AGG - chr7_4:19646359-19646378 Msa1143790:intron 50.0%
!! GATGACTCGGTCTCATAACC+CGG + chr7_4:19646915-19646934 None:intergenic 50.0%
! TACGGGATCACTGGTTGAAC+AGG + chr7_4:19646937-19646956 None:intergenic 50.0%
TGGGGTCATTGGTCGAACTA+CGG + chr7_4:19646955-19646974 None:intergenic 50.0%
! CTTTCACCTTCCTGTTGGCT+AGG + chr7_4:19647201-19647220 None:intergenic 50.0%
! GTGAGCAAGGCGTCATGTTA+GGG + chr7_4:19647408-19647427 None:intergenic 50.0%
! AGTGAGCAAGGCGTCATGTT+AGG + chr7_4:19647409-19647428 None:intergenic 50.0%
TGACCTGGTAACCATCCTCA+AGG - chr7_4:19647448-19647467 Msa1143790:CDS 50.0%
GACCTGGTAACCATCCTCAA+GGG - chr7_4:19647449-19647468 Msa1143790:CDS 50.0%
GTAAGAAGCTCCCTTGAGGA+TGG + chr7_4:19647462-19647481 None:intergenic 50.0%
GGTAGTAAGAAGCTCCCTTG+AGG + chr7_4:19647466-19647485 None:intergenic 50.0%
AGTCATGATACTTGCCACGG+CGG + chr7_4:19647487-19647506 None:intergenic 50.0%
GTTGGGTACCACATGTTGCT+AGG - chr7_4:19647828-19647847 Msa1143790:intron 50.0%
GCATCCCTCCAGGATATAAC+AGG + chr7_4:19648055-19648074 None:intergenic 50.0%
CAAACGAGGCTATGCAGTTG+AGG - chr7_4:19649125-19649144 Msa1143790:intron 50.0%
! AAATCTAGGGCTGGTGCTAG+TGG - chr7_4:19649377-19649396 Msa1143790:intron 50.0%
!!! AGGCATTGGTTTTGCCCTGA+AGG - chr7_4:19649884-19649903 Msa1143790:five_prime_UTR 50.0%
AAGCGTGTAAAGTTGGAGGG+AGG - chr7_4:19650063-19650082 Msa1143790:five_prime_UTR 50.0%
CGAAACTTTGTCACCCGCCA+TGG - chr7_4:19640906-19640925 Msa1143790:three_prime_UTR 55.0%
!! GGTGAAAAAAGAAGCGCCGG+CGG + chr7_4:19640935-19640954 None:intergenic 55.0%
!!! GCCGGCGCTTCTTTTTTCAC+CGG - chr7_4:19640934-19640953 Msa1143790:CDS 55.0%
! GCCGGTGAAAAAAGAAGCGC+CGG + chr7_4:19640938-19640957 None:intergenic 55.0%
CATATCCGTCGACCGAGTTC+CGG - chr7_4:19641047-19641066 Msa1143790:CDS 55.0%
!! GGTGGAGACAGAGAAGCGTT+GGG - chr7_4:19641140-19641159 Msa1143790:intron 55.0%
!! GAAGCGTTGGGAAGAGAAGG+AGG - chr7_4:19641152-19641171 Msa1143790:intron 55.0%
GAGGAGAAAGAGAGACGGAG+CGG - chr7_4:19641174-19641193 Msa1143790:intron 55.0%
AGAAAGAGAGACGGAGCGGT+TGG - chr7_4:19641178-19641197 Msa1143790:intron 55.0%
TTTATCGGAGCTGCTGACGG+TGG - chr7_4:19641228-19641247 Msa1143790:CDS 55.0%
! TGGTTTTCGCCGTTGGAGTG+TGG - chr7_4:19641261-19641280 Msa1143790:CDS 55.0%
AACCGCGAACCACACTCCAA+CGG + chr7_4:19641273-19641292 None:intergenic 55.0%
GCTGGAGCATAACTCTGCAG+CGG + chr7_4:19642760-19642779 None:intergenic 55.0%
CAAGATGGCAACGACTCAGC+TGG + chr7_4:19642778-19642797 None:intergenic 55.0%
! AGGGATTGATGGCTTGGGAC+TGG - chr7_4:19643013-19643032 Msa1143790:intron 55.0%
! GGGATTGATGGCTTGGGACT+GGG - chr7_4:19643014-19643033 Msa1143790:intron 55.0%
GAGAATCCGCTCCTGTGTGA+AGG + chr7_4:19643362-19643381 None:intergenic 55.0%
! TCACGCCTTTTGCCTGTCTC+TGG - chr7_4:19645080-19645099 Msa1143790:intron 55.0%
TAATAGGTCCGGTTCCCGGT+TGG + chr7_4:19646185-19646204 None:intergenic 55.0%
CCAGTAATAGGTCCGGTTCC+CGG + chr7_4:19646189-19646208 None:intergenic 55.0%
CGGCCAGAATCATGCCAGTT+TGG - chr7_4:19646265-19646284 Msa1143790:intron 55.0%
AGGCTTTCGCCACTAGGCTA+CGG - chr7_4:19646365-19646384 Msa1143790:intron 55.0%
TGGTCGAACTACGGGATCAC+TGG + chr7_4:19646946-19646965 None:intergenic 55.0%
GGGGTCATTGGTCGAACTAC+GGG + chr7_4:19646954-19646973 None:intergenic 55.0%
CAATGACCCCATGACCTTCC+CGG - chr7_4:19646964-19646983 Msa1143790:CDS 55.0%
AATGACCCCATGACCTTCCC+GGG - chr7_4:19646965-19646984 Msa1143790:CDS 55.0%
ATTGACCCGGGAAGGTCATG+GGG + chr7_4:19646973-19646992 None:intergenic 55.0%
CATTGACCCGGGAAGGTCAT+GGG + chr7_4:19646974-19646993 None:intergenic 55.0%
TCATTGACCCGGGAAGGTCA+TGG + chr7_4:19646975-19646994 None:intergenic 55.0%
CTTCCTGCAAGCAGTGAGCA+AGG + chr7_4:19647421-19647440 None:intergenic 55.0%
CTTGCTCACTGCTTGCAGGA+AGG - chr7_4:19647419-19647438 Msa1143790:CDS 55.0%
CTCCCTTGAGGATGGTTACC+AGG + chr7_4:19647454-19647473 None:intergenic 55.0%
ATATCCTGGAGGGATGCGTG+AGG - chr7_4:19648058-19648077 Msa1143790:intron 55.0%
GGATGCGTGAGGCTCTTCAT+AGG - chr7_4:19648069-19648088 Msa1143790:intron 55.0%
GCGTGAGGCTCTTCATAGGA+AGG - chr7_4:19648073-19648092 Msa1143790:intron 55.0%
ATCTGCGGATGCCTTGAACC+TGG - chr7_4:19648996-19649015 Msa1143790:intron 55.0%
GAAGAGAGGGGAGGAAACGC+CGG + chr7_4:19640956-19640975 None:intergenic 60.0%
GGGGCCATTCTCTGAATCCG+AGG + chr7_4:19641018-19641037 None:intergenic 60.0%
TCGACGGATATGGCGAAGCG+CGG + chr7_4:19641039-19641058 None:intergenic 60.0%
CGGAACTCGGTCGACGGATA+TGG + chr7_4:19641049-19641068 None:intergenic 60.0%
! CGGTGGAGACAGAGAAGCGT+TGG - chr7_4:19641139-19641158 Msa1143790:intron 60.0%
GCGTTGGGAAGAGAAGGAGG+AGG - chr7_4:19641155-19641174 Msa1143790:intron 60.0%
AGAGAGACGGAGCGGTTGGA+AGG - chr7_4:19641182-19641201 Msa1143790:intron 60.0%
TCCAACGGCGAAAACCACCG+CGG + chr7_4:19641258-19641277 None:intergenic 60.0%
GTTGGAGTGTGGTTCGCGGT+TGG - chr7_4:19641272-19641291 Msa1143790:CDS 60.0%
AGGCCCGACCCGTCTCAAAT+AGG + chr7_4:19642664-19642683 None:intergenic 60.0%
!! TTTAGGAGGGTGCCTCGCAC+TGG - chr7_4:19643680-19643699 Msa1143790:intron 60.0%
AAGGCAGGAGAGAGCGAGTC+AGG + chr7_4:19644523-19644542 None:intergenic 60.0%
!! ATTAGGAGGGCCTCTGAGGC+TGG - chr7_4:19645396-19645415 Msa1143790:intron 60.0%
!!! AGGGCCTCTGAGGCTGGTTT+TGG - chr7_4:19645402-19645421 Msa1143790:intron 60.0%
ACTGGACTGACCGGTCCAAC+CGG - chr7_4:19646167-19646186 Msa1143790:CDS 60.0%
CCGGGAACCGGACCTATTAC+TGG - chr7_4:19646186-19646205 Msa1143790:CDS 60.0%
CGGGAAGGTCATGGGGTCAT+TGG + chr7_4:19646966-19646985 None:intergenic 60.0%
GACCTTCCCGGGTCAATGAC+CGG - chr7_4:19646976-19646995 Msa1143790:CDS 60.0%
AACCGGACCGGTCATTGACC+CGG + chr7_4:19646986-19647005 None:intergenic 60.0%
ACGCCTTGCTCACTGCTTGC+AGG - chr7_4:19647415-19647434 Msa1143790:intron 60.0%
!! GCAGGAAGGCAGCATTGACC+TGG - chr7_4:19647433-19647452 Msa1143790:CDS 60.0%
GGAGCTTCTTACTACCGCCG+TGG - chr7_4:19647470-19647489 Msa1143790:intron 60.0%
! CGGGCAGTGTCTGATGGATC+TGG - chr7_4:19648513-19648532 Msa1143790:intron 60.0%
! TAGGGCTGGTGCTAGTGGTG+AGG - chr7_4:19649382-19649401 Msa1143790:intron 60.0%
TGAGAAGCTGTGGCGGCTCG+CGG + chr7_4:19640981-19641000 None:intergenic 65.0%
GACGGATATGGCGAAGCGCG+GGG + chr7_4:19641037-19641056 None:intergenic 65.0%
CGACGGATATGGCGAAGCGC+GGG + chr7_4:19641038-19641057 None:intergenic 65.0%
TGTCGCCGGAACTCGGTCGA+CGG + chr7_4:19641055-19641074 None:intergenic 65.0%
AACGGCGAAAACCACCGCGG+AGG + chr7_4:19641255-19641274 None:intergenic 65.0%
! TCCGCGGTGGTTTTCGCCGT+TGG - chr7_4:19641254-19641273 Msa1143790:CDS 65.0%
CGCCGTTGGAGTGTGGTTCG+CGG - chr7_4:19641268-19641287 Msa1143790:CDS 65.0%
GAGCTGCAACAGCCAGTGCG+AGG + chr7_4:19643695-19643714 None:intergenic 65.0%
CTGGACTGACCGGTCCAACC+GGG - chr7_4:19646168-19646187 Msa1143790:CDS 65.0%
TGACCGGTCCAACCGGGAAC+CGG - chr7_4:19646174-19646193 Msa1143790:CDS 65.0%
GACCGGTCATTGACCCGGGA+AGG + chr7_4:19646981-19647000 None:intergenic 65.0%
TCCCGGGTCAATGACCGGTC+CGG - chr7_4:19646981-19647000 Msa1143790:CDS 65.0%
ACCGGACCGGTCATTGACCC+GGG + chr7_4:19646985-19647004 None:intergenic 65.0%
AGAGCCTCACGCATCCCTCC+AGG + chr7_4:19648065-19648084 None:intergenic 65.0%
! GGCTGGTGCTAGTGGTGAGG+TGG - chr7_4:19649385-19649404 Msa1143790:intron 65.0%
GCGAGCCGCCACAGCTTCTC+AGG - chr7_4:19640980-19640999 Msa1143790:CDS 70.0%
CTGCTGACGGTGGACCTCCG+CGG - chr7_4:19641238-19641257 Msa1143790:CDS 70.0%
GGTCCGGTTCCCGGTTGGAC+CGG + chr7_4:19646180-19646199 None:intergenic 70.0%
TCACCCGCCATGGCGTCCGC+CGG - chr7_4:19640916-19640935 Msa1143790:exon 75.0%
!! AGAAGCGCCGGCGGACGCCA+TGG + chr7_4:19640926-19640945 None:intergenic 75.0%
CTCGCGGCGGAAGAGAGGGG+AGG + chr7_4:19640965-19640984 None:intergenic 75.0%
CGGCTCGCGGCGGAAGAGAG+GGG + chr7_4:19640968-19640987 None:intergenic 75.0%
GCGGCTCGCGGCGGAAGAGA+GGG + chr7_4:19640969-19640988 None:intergenic 75.0%
GAAGCTGTGGCGGCTCGCGG+CGG + chr7_4:19640978-19640997 None:intergenic 75.0%
CTGACGGTGGACCTCCGCGG+TGG - chr7_4:19641241-19641260 Msa1143790:CDS 75.0%
!!! AGCGCCGGCGGACGCCATGG+CGG + chr7_4:19640923-19640942 None:intergenic 80.0%
! GGCGGCTCGCGGCGGAAGAG+AGG + chr7_4:19640970-19640989 None:intergenic 80.0%
!! GCGCCGGCGGACGCCATGGC+GGG + chr7_4:19640922-19640941 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 19640552 19650166 19640552 ID=Msa1143790;Name=Msa1143790
chr7_4 mRNA 19640552 19650166 19640552 ID=Msa1143790-mRNA-1;Parent=Msa1143790;Name=Msa1143790-mRNA-1;_AED=0.12;_eAED=0.12;_QI=373|1|1|1|1|1|14|375|703
chr7_4 exon 19640552 19641117 19640552 ID=Msa1143790-mRNA-1:exon:4499;Parent=Msa1143790-mRNA-1
chr7_4 exon 19641224 19641333 19641224 ID=Msa1143790-mRNA-1:exon:4498;Parent=Msa1143790-mRNA-1
chr7_4 exon 19641572 19641657 19641572 ID=Msa1143790-mRNA-1:exon:4497;Parent=Msa1143790-mRNA-1
chr7_4 exon 19641840 19641953 19641840 ID=Msa1143790-mRNA-1:exon:4496;Parent=Msa1143790-mRNA-1
chr7_4 exon 19642624 19642993 19642624 ID=Msa1143790-mRNA-1:exon:4495;Parent=Msa1143790-mRNA-1
chr7_4 exon 19643151 19643281 19643151 ID=Msa1143790-mRNA-1:exon:4494;Parent=Msa1143790-mRNA-1
chr7_4 exon 19643431 19643539 19643431 ID=Msa1143790-mRNA-1:exon:4493;Parent=Msa1143790-mRNA-1
chr7_4 exon 19644901 19645022 19644901 ID=Msa1143790-mRNA-1:exon:4492;Parent=Msa1143790-mRNA-1
chr7_4 exon 19645211 19645317 19645211 ID=Msa1143790-mRNA-1:exon:4491;Parent=Msa1143790-mRNA-1
chr7_4 exon 19646150 19646254 19646150 ID=Msa1143790-mRNA-1:exon:4490;Parent=Msa1143790-mRNA-1
chr7_4 exon 19646962 19647120 19646962 ID=Msa1143790-mRNA-1:exon:4489;Parent=Msa1143790-mRNA-1
chr7_4 exon 19647417 19647472 19647417 ID=Msa1143790-mRNA-1:exon:4488;Parent=Msa1143790-mRNA-1
chr7_4 exon 19647652 19647703 19647652 ID=Msa1143790-mRNA-1:exon:4487;Parent=Msa1143790-mRNA-1
chr7_4 exon 19649394 19650166 19649394 ID=Msa1143790-mRNA-1:exon:4486;Parent=Msa1143790-mRNA-1
chr7_4 five_prime_UTR 19649794 19650166 19649794 ID=Msa1143790-mRNA-1:five_prime_utr;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19649394 19649793 19649394 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19647652 19647703 19647652 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19647417 19647472 19647417 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19646962 19647120 19646962 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19646150 19646254 19646150 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19645211 19645317 19645211 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19644901 19645022 19644901 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19643431 19643539 19643431 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19643151 19643281 19643151 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19642624 19642993 19642624 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19641840 19641953 19641840 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19641572 19641657 19641572 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19641224 19641333 19641224 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 CDS 19640927 19641117 19640927 ID=Msa1143790-mRNA-1:cds;Parent=Msa1143790-mRNA-1
chr7_4 three_prime_UTR 19640552 19640926 19640552 ID=Msa1143790-mRNA-1:three_prime_utr;Parent=Msa1143790-mRNA-1
Gene Sequence

>Msa1143790

ATGGCGTCCGCCGGCGCTTCTTTTTTCACCGGCGTTTCCTCCCCTCTCTTCCGCCGCGAGCCGCCACAGCTTCTCAGGAAATCAAATTCACCTCGGATTCAGAGAATGGCCCCGCGCTTCGCCATATCCGTCGACCGAGTTCCGGCGACAATTGTAACTGAGGAGAAAAGAACAACGACAGAGGCGAAACGAGAAGAAGAGGATAGAAGAAATACGGTGGAGACAGAGAAGCGTTGGGAAGAGAAGGAGGAGGAGAAAGAGAGACGGAGCGGTTGGAAGGAATATTTGGAGCAAGCGAAGGAGTTTATCGGAGCTGCTGACGGTGGACCTCCGCGGTGGTTTTCGCCGTTGGAGTGTGGTTCGCGGTTGGATAATTCTCCTCTTATGCTCTTCTTACCGGGGATTGATGGCTTGGGACTGGGACTTATTTCACATCATCAGAAACTGGGAAGGATTTTTGATTTGTGGTGCTTGCATATTCCAGTTGCGGATCGAACATCATTTACAGACCTTGTGAAATTAGTTGAGAAAACAGTTAGGTCAGAATATGAACGTTCACCAAATAGGCCCATATATCTTGTTGGAGAATCTTTAGGAGGGTGCCTCGCACTGGCTGTTGCAGCTCGTAACCGTGATATTGATCTTGTACTAATTTTGGCAAACCCAGCTACTTCATTCAGCAGGTCCCAGTTACAACTCGTAACACCATTGTTGGAAACTTTGCCTGACTCGCTCTCTCCTGCCTTGCCTAACATTCTCAGTCTGACAGCAGGAGGGCCTCTGAGGCTGGTTTTGGATAACTTCGTGAAAGGACTTCCTCTACAAAATACAGCAAGAGAGCTAATTGGAGACTTTACTACTATCTCATCATCTCTTCCTGTTCTTGCAGACATATTACCAAAAGAAACACTTTTGTGGAAACTAAAGATGTCTAAGTCAGCTTCTGAATATGCCAATTCACGTCTTTATGCTATCAAAGCTCAAACTTTGATACTCAGCAGTGGAAATGACCAATTACTACCTAGCCAACAGGAAGGTGAAAGACTACATACATTACTGCCTAATTGCGAGCTCCGTAAATTTGATGACAGTGGACATTTCCTACTACTGGAAGGCAGCATTGACCTGGTAACCATCCTCAAGGGAGCTTCTTACTACCGCCGTGGCAAGTATCATGACTATGTTTCTGATTTCATACCGCCTACACCTTATGAAGCCAAAGAAGTAATAGAATCAAACAGATTGATTAATGCGGTCACAAGCGCTGTAATGCTTTCAACCTTGGAGGATGGAACGATTGTAAAGGGACTTGCTGGAATTCCTTCAGAGGGTCCTGTTTTGTTTGTTGGGTACCACATGTTGCTAGGATTGGAATTAGTTCCCTTGGTTTCTCGAATTTATAATGAAAGAAATATCCTTGTTAGAGGAATAGCACATCCTATGATGTTCAAGAGACAGAAAAATGGGAGTTTGCCAGAAATATCTTCTTTTGACACATTCAGAATTATGGGTGCTGTTCCTGTAGCACCAACTAACCTCTTTAAGCTTTTATCTTCCAAGTCACATGTCCTGTTATATCCTGGAGGGATGCGTGAGGCTCTTCATAGGAAGGGTGAAGAATACAAATTATTCTGGCCTGAACAATCTGAGTTTATCAGGATGGCAGCAAGATTTGGAGCCAAAATCGTACCTTTTGGTGCTGTTGGAGAAGATGATCTTGGCCAAGTTGTGATTGATTATGATGACTTGGTGAAGATTCCTTACTTTAAGTCTGAAATAGAAAAACTTACAAACGAGGCTATGCAGTTGAGGGCTGGTGCTAGTGGTGAGGTGGCAAATCAACAAGTGCATATGCCTGGAATTTTGCCTAAAGTTCCAGGGCGATTCTACTATTATTTTGGAAAACCAATTGAAACAACAGGAAGGAAACAGGAACTTAAAGACAGAGAGAACTCTCAAGAATTATATCTTGAAGTGCAATCTGAGGTTGAGAGATGTATTGCTTATTTAAAAGAGAAACGAGAAAGCGATCCTTACAGAAGTATAGTGTCTCGGTTATTCTACCAAGCTACACATGGTTTTACATCTGATATTCCAACATTTGAAATTTGA
Protein sequence

>Msa1143790

MASAGASFFTGVSSPLFRREPPQLLRKSNSPRIQRMAPRFAISVDRVPATIVTEEKRTTTEAKREEEDRRNTVETEKRWEEKEEEKERRSGWKEYLEQAKEFIGAADGGPPRWFSPLECGSRLDNSPLMLFLPGIDGLGLGLISHHQKLGRIFDLWCLHIPVADRTSFTDLVKLVEKTVRSEYERSPNRPIYLVGESLGGCLALAVAARNRDIDLVLILANPATSFSRSQLQLVTPLLETLPDSLSPALPNILSLTAGGPLRLVLDNFVKGLPLQNTARELIGDFTTISSSLPVLADILPKETLLWKLKMSKSASEYANSRLYAIKAQTLILSSGNDQLLPSQQEGERLHTLLPNCELRKFDDSGHFLLLEGSIDLVTILKGASYYRRGKYHDYVSDFIPPTPYEAKEVIESNRLINAVTSAVMLSTLEDGTIVKGLAGIPSEGPVLFVGYHMLLGLELVPLVSRIYNERNILVRGIAHPMMFKRQKNGSLPEISSFDTFRIMGAVPVAPTNLFKLLSSKSHVLLYPGGMREALHRKGEEYKLFWPEQSEFIRMAARFGAKIVPFGAVGEDDLGQVVIDYDDLVKIPYFKSEIEKLTNEAMQLRAGASGEVANQQVHMPGILPKVPGRFYYYFGKPIETTGRKQELKDRENSQELYLEVQSEVERCIAYLKEKRESDPYRSIVSRLFYQATHGFTSDIPTFEI*