Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598560 | XP_003605731.2 | 97.319 | 634 | 17 | 0 | 1 | 634 | 1 | 634 | 0.0 | 1300 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598560 | sp|Q5MAU8|PPA27_ARATH | 35.437 | 618 | 340 | 15 | 37 | 634 | 13 | 591 | 8.06e-118 | 367 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0132240 | Msa0598560 | 0.805086 | 1.581975e-49 | -8.615850e-47 |
Msa0204780 | Msa0598560 | 0.832033 | 1.190881e-55 | -8.615850e-47 |
Msa0370870 | Msa0598560 | 0.866459 | 2.807636e-65 | -8.615850e-47 |
Msa0379060 | Msa0598560 | 0.827347 | 1.645118e-54 | -8.615850e-47 |
Msa0381220 | Msa0598560 | 0.835024 | 2.134326e-56 | -8.615850e-47 |
Msa0404700 | Msa0598560 | 0.810854 | 9.368740e-51 | -8.615850e-47 |
Msa0416320 | Msa0598560 | 0.831139 | 1.977432e-55 | -8.615850e-47 |
Msa0419050 | Msa0598560 | 0.810366 | 1.194563e-50 | -8.615850e-47 |
Msa0426810 | Msa0598560 | 0.824508 | 7.770133e-54 | -8.615850e-47 |
Msa0431020 | Msa0598560 | 0.840945 | 6.402579e-58 | -8.615850e-47 |
Msa0266210 | Msa0598560 | 0.824906 | 6.262335e-54 | -8.615850e-47 |
Msa0287670 | Msa0598560 | 0.832595 | 8.644697e-56 | -8.615850e-47 |
Msa0310490 | Msa0598560 | 0.820250 | 7.575901e-53 | -8.615850e-47 |
Msa0312310 | Msa0598560 | 0.820770 | 5.753706e-53 | -8.615850e-47 |
Msa0328380 | Msa0598560 | 0.829538 | 4.868734e-55 | -8.615850e-47 |
Msa0362060 | Msa0598560 | 0.866189 | 3.418674e-65 | -8.615850e-47 |
Msa0363100 | Msa0598560 | 0.822654 | 2.109979e-53 | -8.615850e-47 |
Msa0363170 | Msa0598560 | 0.820872 | 5.452481e-53 | -8.615850e-47 |
Msa0508540 | Msa0598560 | 0.825167 | 5.434581e-54 | -8.615850e-47 |
Msa0510560 | Msa0598560 | 0.824234 | 9.012974e-54 | -8.615850e-47 |
Msa0542360 | Msa0598560 | 0.917035 | 8.663794e-86 | -8.615850e-47 |
Msa0579350 | Msa0598560 | 0.811425 | 7.047117e-51 | -8.615850e-47 |
Msa0598560 | Msa0650620 | 0.802411 | 5.681746e-49 | -8.615850e-47 |
Msa0598560 | Msa0677570 | 0.878106 | 3.671644e-69 | -8.615850e-47 |
Msa0598560 | Msa0713230 | 0.801332 | 9.464625e-49 | -8.615850e-47 |
Msa0598560 | Msa0866800 | 0.975575 | 3.328186e-140 | -8.615850e-47 |
Msa0598560 | Msa0944730 | 0.848156 | 7.333735e-60 | -8.615850e-47 |
Msa0598560 | Msa0982590 | 0.857188 | 1.935053e-62 | -8.615850e-47 |
Msa0598560 | Msa1143790 | 0.818051 | 2.398263e-52 | -8.615850e-47 |
Msa0598560 | Msa1182640 | 0.850319 | 1.833492e-60 | -8.615850e-47 |
Msa0598560 | Msa1229850 | 0.807061 | 6.074309e-50 | -8.615850e-47 |
Msa0598560 | Msa1235020 | 0.806248 | 9.019947e-50 | -8.615850e-47 |
Msa0598560 | Msa1272520 | 0.846802 | 1.727549e-59 | -8.615850e-47 |
Msa0598560 | Msa1310660 | 0.852753 | 3.752940e-61 | -8.615850e-47 |
Msa0598560 | Msa1350690 | 0.831770 | 1.382759e-55 | -8.615850e-47 |
Msa0598560 | Msa1360280 | 0.846951 | 1.572292e-59 | -8.615850e-47 |
Msa0598560 | Msa1368180 | 0.815017 | 1.146891e-51 | -8.615850e-47 |
Msa0598560 | Msa1383480 | 0.829582 | 4.750015e-55 | -8.615850e-47 |
Msa0598560 | Msa1395320 | -0.802476 | 5.509502e-49 | -8.615850e-47 |
Msa0598560 | Msa1419860 | 0.820511 | 6.601141e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598560 | MtrunA17_Chr4g0022251 | 97.319 | 634 | 17 | 0 | 1 | 634 | 1 | 634 | 0.0 | 1300 |
Msa0598560 | MtrunA17_Chr1g0173511 | 87.090 | 488 | 51 | 3 | 142 | 617 | 5 | 492 | 0.0 | 879 |
Msa0598560 | MtrunA17_Chr3g0116051 | 35.823 | 589 | 313 | 18 | 68 | 634 | 58 | 603 | 9.02e-112 | 348 |
Msa0598560 | MtrunA17_Chr4g0057551 | 36.014 | 572 | 308 | 16 | 83 | 634 | 74 | 607 | 2.17e-109 | 342 |
Msa0598560 | MtrunA17_Chr8g0364481 | 36.266 | 557 | 299 | 15 | 97 | 634 | 73 | 592 | 5.75e-109 | 341 |
Msa0598560 | MtrunA17_Chr5g0419621 | 33.997 | 653 | 357 | 21 | 1 | 634 | 2 | 599 | 4.44e-108 | 339 |
Msa0598560 | MtrunA17_Chr4g0043001 | 34.791 | 526 | 247 | 21 | 173 | 632 | 85 | 580 | 1.78e-71 | 243 |
Msa0598560 | MtrunA17_Chr4g0043021 | 31.177 | 603 | 295 | 22 | 87 | 632 | 41 | 580 | 5.24e-69 | 236 |
Msa0598560 | MtrunA17_Chr3g0116091 | 30.396 | 454 | 240 | 13 | 199 | 634 | 4 | 399 | 2.16e-65 | 221 |
Msa0598560 | MtrunA17_Chr1g0173501 | 76.667 | 150 | 26 | 3 | 1 | 142 | 1 | 149 | 2.04e-58 | 194 |
Msa0598560 | MtrunA17_Chr3g0116071 | 31.975 | 319 | 141 | 9 | 195 | 506 | 4 | 253 | 2.81e-44 | 158 |
Msa0598560 | MtrunA17_Chr7g0266131 | 28.851 | 409 | 223 | 13 | 206 | 606 | 45 | 393 | 5.61e-41 | 155 |
Msa0598560 | MtrunA17_Chr1g0178831 | 29.096 | 354 | 193 | 9 | 283 | 622 | 102 | 411 | 1.43e-36 | 142 |
Msa0598560 | MtrunA17_Chr5g0443881 | 28.609 | 381 | 208 | 13 | 231 | 604 | 62 | 385 | 2.91e-35 | 138 |
Msa0598560 | MtrunA17_Chr3g0098721 | 28.614 | 332 | 190 | 9 | 231 | 555 | 56 | 347 | 1.20e-34 | 136 |
Msa0598560 | MtrunA17_Chr4g0064541 | 29.771 | 393 | 209 | 17 | 209 | 581 | 45 | 390 | 8.93e-33 | 132 |
Msa0598560 | MtrunA17_Chr7g0266151 | 27.586 | 377 | 198 | 13 | 216 | 581 | 47 | 359 | 2.84e-32 | 129 |
Msa0598560 | MtrunA17_Chr1g0211041 | 28.272 | 382 | 214 | 14 | 216 | 581 | 56 | 393 | 4.34e-31 | 127 |
Msa0598560 | MtrunA17_Chr4g0019091 | 27.208 | 419 | 219 | 15 | 216 | 604 | 55 | 417 | 2.81e-30 | 124 |
Msa0598560 | MtrunA17_Chr7g0236041 | 27.273 | 363 | 200 | 10 | 223 | 546 | 76 | 413 | 1.53e-27 | 117 |
Msa0598560 | MtrunA17_Chr3g0121411 | 25.823 | 395 | 222 | 11 | 223 | 575 | 77 | 442 | 6.00e-27 | 115 |
Msa0598560 | MtrunA17_Chr3g0121431 | 25.316 | 395 | 224 | 11 | 223 | 575 | 132 | 497 | 1.84e-26 | 114 |
Msa0598560 | MtrunA17_Chr6g0453731 | 27.211 | 294 | 159 | 6 | 283 | 546 | 146 | 414 | 4.07e-26 | 113 |
Msa0598560 | MtrunA17_Chr4g0019071 | 28.462 | 260 | 149 | 9 | 362 | 604 | 55 | 294 | 4.04e-22 | 98.2 |
Msa0598560 | MtrunA17_Chr3g0116081 | 31.356 | 118 | 73 | 3 | 518 | 634 | 5 | 115 | 3.06e-13 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598560 | AT5G50400.1 | 35.437 | 618 | 340 | 15 | 37 | 634 | 13 | 591 | 8.19e-119 | 367 |
Msa0598560 | AT5G50400.2 | 36.976 | 549 | 296 | 12 | 105 | 634 | 2 | 519 | 1.84e-113 | 350 |
Msa0598560 | AT4G24890.1 | 35.478 | 575 | 314 | 17 | 79 | 634 | 59 | 595 | 6.29e-113 | 352 |
Msa0598560 | AT1G13750.1 | 37.522 | 565 | 283 | 17 | 96 | 634 | 73 | 593 | 1.14e-111 | 348 |
Msa0598560 | AT2G03450.1 | 31.738 | 627 | 300 | 21 | 68 | 632 | 17 | 577 | 3.24e-73 | 248 |
Msa0598560 | AT1G13900.1 | 31.023 | 606 | 318 | 22 | 73 | 632 | 26 | 577 | 1.05e-67 | 233 |
Msa0598560 | AT3G20500.1 | 29.058 | 382 | 205 | 13 | 231 | 604 | 60 | 383 | 3.37e-35 | 138 |
Msa0598560 | AT3G52820.1 | 27.273 | 385 | 217 | 9 | 241 | 606 | 46 | 386 | 6.94e-33 | 132 |
Msa0598560 | AT4G36350.1 | 28.329 | 413 | 234 | 13 | 220 | 609 | 55 | 428 | 1.35e-32 | 131 |
Msa0598560 | AT1G56360.1 | 28.851 | 409 | 222 | 16 | 220 | 604 | 54 | 417 | 3.64e-32 | 130 |
Msa0598560 | AT5G34850.1 | 27.551 | 392 | 217 | 16 | 210 | 581 | 45 | 389 | 9.75e-30 | 123 |
Msa0598560 | AT4G13700.1 | 27.168 | 346 | 217 | 9 | 226 | 546 | 73 | 408 | 2.74e-29 | 122 |
Msa0598560 | AT3G52780.1 | 29.044 | 272 | 161 | 6 | 283 | 549 | 100 | 344 | 1.56e-28 | 119 |
Msa0598560 | AT3G52810.1 | 28.000 | 275 | 166 | 6 | 279 | 550 | 103 | 348 | 2.61e-28 | 118 |
Msa0598560 | AT2G27190.1 | 26.241 | 423 | 235 | 15 | 187 | 581 | 23 | 396 | 2.14e-27 | 116 |
Msa0598560 | AT3G52780.2 | 28.409 | 264 | 157 | 6 | 283 | 541 | 100 | 336 | 1.91e-26 | 111 |
Msa0598560 | AT4G13700.2 | 26.488 | 336 | 212 | 9 | 226 | 536 | 73 | 398 | 1.91e-25 | 109 |
Msa0598560 | AT3G07130.1 | 27.385 | 325 | 175 | 9 | 283 | 575 | 140 | 435 | 9.22e-25 | 108 |
Msa0598560 | AT2G18130.1 | 30.279 | 251 | 140 | 8 | 370 | 604 | 167 | 398 | 1.02e-24 | 107 |
Msa0598560 | AT2G16430.2 | 27.619 | 315 | 176 | 12 | 283 | 581 | 117 | 395 | 5.01e-23 | 103 |
Msa0598560 | AT3G07130.2 | 26.027 | 292 | 162 | 7 | 283 | 545 | 140 | 406 | 1.82e-21 | 99.0 |
Msa0598560 | AT2G16430.1 | 27.857 | 280 | 156 | 10 | 316 | 581 | 28 | 275 | 4.25e-21 | 95.5 |
Msa0598560 | AT2G32770.2 | 24.768 | 323 | 171 | 9 | 283 | 560 | 68 | 363 | 4.20e-20 | 94.0 |
Msa0598560 | AT2G32770.3 | 24.768 | 323 | 171 | 9 | 283 | 560 | 149 | 444 | 7.15e-20 | 94.0 |
Msa0598560 | AT3G46120.1 | 25.830 | 271 | 143 | 7 | 347 | 604 | 116 | 341 | 1.47e-17 | 85.5 |
Msa0598560 | AT2G32770.1 | 22.327 | 318 | 156 | 8 | 283 | 560 | 149 | 415 | 9.75e-14 | 74.7 |
Find 158 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCATTTCCTTTGGTGATA+TGG | 0.160418 | 4_2:+35394389 | Msa0598560:CDS |
CTGATAATGCAGTAAAATTT+TGG | 0.174680 | 4_2:-35389137 | None:intergenic |
CCTAGTCCTGCCAAGGATTT+TGG | 0.184357 | 4_2:+35393984 | Msa0598560:CDS |
AATCCTAAGAAGCCACTTTA+TGG | 0.194096 | 4_2:+35393178 | Msa0598560:CDS |
CATTCATGGAATCCTCAAAT+TGG | 0.201189 | 4_2:+35389001 | Msa0598560:exon |
CCCGATTATGACAAGAAATA+AGG | 0.214350 | 4_2:-35397002 | None:intergenic |
AGCTGGTGGAGTTGAAAATT+TGG | 0.227346 | 4_2:-35394346 | None:intergenic |
CCCTTATTTCTTGTCATAAT+CGG | 0.231580 | 4_2:+35397001 | Msa0598560:three_prime_UTR |
TGTCCATAAAGTGGCTTCTT+AGG | 0.235315 | 4_2:-35393181 | None:intergenic |
TTCAGAGATTATGTCGATTC+TGG | 0.253362 | 4_2:+35395009 | Msa0598560:intron |
TAGAAATGATTTAAACTTAG+AGG | 0.262549 | 4_2:+35396576 | Msa0598560:CDS |
GCCATTGCTGTTACAGAATA+AGG | 0.264422 | 4_2:+35395697 | Msa0598560:CDS |
AGAAAATGTGGCCTTGGTTT+TGG | 0.278781 | 4_2:-35388902 | None:intergenic |
AGATTATAGAATTTGAATTA+AGG | 0.305309 | 4_2:-35388961 | None:intergenic |
CTGAGAGCTGGAGCCTAAAA+AGG | 0.307021 | 4_2:+35396518 | Msa0598560:CDS |
TTCATTTCCTTTGGTGATAT+GGG | 0.313819 | 4_2:+35394390 | Msa0598560:CDS |
TTTCCATTCATATTCATTCA+TGG | 0.318705 | 4_2:+35388987 | Msa0598560:exon |
CAGCTCAAATTCTAAATTGT+TGG | 0.325166 | 4_2:+35389230 | Msa0598560:CDS |
TAGTAATGATGATAACTCTT+AGG | 0.327889 | 4_2:-35388839 | None:intergenic |
GCAGTATAACTGGATGAAAA+AGG | 0.337674 | 4_2:+35395290 | Msa0598560:intron |
TAGACATTGAAGGGCTAATA+AGG | 0.346423 | 4_2:-35389059 | None:intergenic |
GAGCTCAAATTCATTTCCTT+TGG | 0.349534 | 4_2:+35394381 | Msa0598560:CDS |
CGAAACCGAGAGATGGAGAT+TGG | 0.349856 | 4_2:+35389289 | Msa0598560:CDS |
ACACATATAGATATATTAAA+AGG | 0.355435 | 4_2:+35396853 | Msa0598560:three_prime_UTR |
GACCGAGATAGGCTTTAAAT+AGG | 0.356408 | 4_2:-35397110 | None:intergenic |
AACTTTCCCTTCCTCAACTT+TGG | 0.356583 | 4_2:+35389083 | Msa0598560:CDS |
TTTCTCAGCCCCTGCCTTGT+TGG | 0.369987 | 4_2:+35393130 | Msa0598560:CDS |
TAAACGAGTTGGACCGAGAT+AGG | 0.370957 | 4_2:-35397121 | None:intergenic |
GGCTTATCCTTTGCTGCAGT+TGG | 0.372410 | 4_2:-35395099 | None:intergenic |
AAAGGAAGAAAATGTGGCCT+TGG | 0.387156 | 4_2:-35388908 | None:intergenic |
TTGAAGCTACTGGACTAATA+AGG | 0.387415 | 4_2:-35394845 | None:intergenic |
TATTCTTACTTGGAATTTGA+AGG | 0.390234 | 4_2:-35389327 | None:intergenic |
AGAAACAAATGCAGAATTGT+AGG | 0.391975 | 4_2:+35396798 | Msa0598560:three_prime_UTR |
GAGTTCTATTATTTACAAAC+TGG | 0.393218 | 4_2:+35389464 | Msa0598560:CDS |
TCCTTTGCTGCAGTTGGCAT+TGG | 0.393804 | 4_2:-35395093 | None:intergenic |
CCTTATTTCTTGTCATAATC+GGG | 0.394063 | 4_2:+35397002 | Msa0598560:three_prime_UTR |
ATTGTTTGAGAATTTGTCTA+AGG | 0.400148 | 4_2:-35395969 | None:intergenic |
CCGATTATGACAAGAAATAA+GGG | 0.404971 | 4_2:-35397001 | None:intergenic |
ATCAGATACAAGAGAAGTTA+AGG | 0.412947 | 4_2:+35396730 | Msa0598560:CDS |
CATGCTGTCATTGGCATGGC+TGG | 0.413111 | 4_2:+35395941 | Msa0598560:CDS |
TTCCTCAACTTTGGACCTTA+CGG | 0.414650 | 4_2:+35389092 | Msa0598560:CDS |
AGTGCTTACTCCTACAGATA+TGG | 0.417269 | 4_2:+35394062 | Msa0598560:CDS |
ATTCATGGAATCCTCAAATT+GGG | 0.419365 | 4_2:+35389002 | Msa0598560:exon |
CTGTAGGAGTAAGCACTTGA+TGG | 0.420678 | 4_2:-35394056 | None:intergenic |
TCAGCCCCTGCCTTGTTGGA+AGG | 0.422865 | 4_2:+35393134 | Msa0598560:CDS |
CATTCCTATAAAAGATCAAA+AGG | 0.427448 | 4_2:+35395877 | Msa0598560:CDS |
TTTAGATGATAATCCGTTGT+TGG | 0.430584 | 4_2:-35395648 | None:intergenic |
TGCATTGGCAGGCTGAGAGC+TGG | 0.432137 | 4_2:+35396506 | Msa0598560:intron |
AAACACTGAGTTTACATTGT+TGG | 0.436214 | 4_2:-35394763 | None:intergenic |
CTGATATTCAGTTTAAGATA+AGG | 0.443765 | 4_2:-35389210 | None:intergenic |
GGAGACATAAGTTATGCAAC+TGG | 0.453721 | 4_2:+35394792 | Msa0598560:CDS |
TATGAAACTCTTGAAGCTAC+TGG | 0.454406 | 4_2:-35394855 | None:intergenic |
GTTTCATACATGACAGCAAT+CGG | 0.454768 | 4_2:+35394870 | Msa0598560:CDS |
ATCATCATTACTATAAGAAA+AGG | 0.457395 | 4_2:+35388849 | Msa0598560:five_prime_UTR |
GGTCTAGTAACTCGGCTGAT+TGG | 0.457957 | 4_2:+35394313 | Msa0598560:intron |
CAGCAAATCCAATATGCAAA+TGG | 0.463555 | 4_2:+35393789 | Msa0598560:CDS |
GACTATTCCCACTGTAGGTA+GGG | 0.464037 | 4_2:-35397057 | None:intergenic |
TTTGTCACGGTTACCGTCAC+CGG | 0.464369 | 4_2:+35389261 | Msa0598560:CDS |
ATAGAGTTTGTGTTCTTCAC+TGG | 0.469598 | 4_2:+35393103 | Msa0598560:CDS |
ATGTTTGAGAACCCAATTTG+AGG | 0.472251 | 4_2:-35389013 | None:intergenic |
ATTCCATGAATGAATATGAA+TGG | 0.472503 | 4_2:-35388990 | None:intergenic |
GCTAGACCATAGGTCCTTGT+TGG | 0.477756 | 4_2:-35397088 | None:intergenic |
TTGATAACCGATAGTGCTCC+AGG | 0.477995 | 4_2:-35394717 | None:intergenic |
AGCTCATCTGATCCTCCAGC+TGG | 0.484295 | 4_2:-35394363 | None:intergenic |
CCAAAATCCTTGGCAGGACT+AGG | 0.485338 | 4_2:-35393984 | None:intergenic |
TAGGTCCTTGTTGGACGGCC+AGG | 0.485906 | 4_2:-35397079 | None:intergenic |
GGCCGTCCAACAAGGACCTA+TGG | 0.489785 | 4_2:+35397082 | Msa0598560:three_prime_UTR |
TTCAGAAGAACACTACATTC+AGG | 0.496934 | 4_2:+35394431 | Msa0598560:CDS |
CCACATTCACCACCAGAGTC+AGG | 0.499819 | 4_2:-35395048 | None:intergenic |
AACCGTAAGGTCCAAAGTTG+AGG | 0.499979 | 4_2:-35389094 | None:intergenic |
GCTCCTGTACATGCTGTCAT+TGG | 0.501222 | 4_2:+35395932 | Msa0598560:CDS |
GTTTATGTTACTCCTGACTC+TGG | 0.501264 | 4_2:+35395036 | Msa0598560:CDS |
AATGCAAGAAAGAACAGAAT+GGG | 0.502167 | 4_2:+35393017 | Msa0598560:CDS |
ATGAGATTGACATGGGTTAG+TGG | 0.502611 | 4_2:+35393753 | Msa0598560:CDS |
AGTGGACCTTCCAACAAGGC+AGG | 0.508899 | 4_2:-35393140 | None:intergenic |
ATTTAGTGTGTTTAACCGTA+AGG | 0.512631 | 4_2:-35389107 | None:intergenic |
TGAGATTGACATGGGTTAGT+GGG | 0.513254 | 4_2:+35393754 | Msa0598560:CDS |
GAGTTTGTGTTCTTCACTGG+TGG | 0.514565 | 4_2:+35393106 | Msa0598560:CDS |
TGCCATCCAAAATCCTTGGC+AGG | 0.514716 | 4_2:-35393990 | None:intergenic |
GGGAAAGTTGTAGACATTGA+AGG | 0.519414 | 4_2:-35389069 | None:intergenic |
CCTGACTCTGGTGGTGAATG+TGG | 0.520849 | 4_2:+35395048 | Msa0598560:CDS |
TGAACAGCCTGGAGCACTAT+CGG | 0.522454 | 4_2:+35394710 | Msa0598560:intron |
AGTGCTGAATGGATGAATCC+TGG | 0.523299 | 4_2:-35394017 | None:intergenic |
TCCAATGCCAACTGCAGCAA+AGG | 0.523966 | 4_2:+35395092 | Msa0598560:CDS |
TTAATAGACAACATACTCCT+TGG | 0.526063 | 4_2:+35395325 | Msa0598560:CDS |
ACCGAGAGATGGAGATTGGT+TGG | 0.528220 | 4_2:+35389293 | Msa0598560:CDS |
CTTGAGATATGTCCATAAAG+TGG | 0.530030 | 4_2:-35393190 | None:intergenic |
GACATACCTTGACAGGGTAA+TGG | 0.531072 | 4_2:-35389514 | None:intergenic |
GCCTTATTCTGTAACAGCAA+TGG | 0.531563 | 4_2:-35395698 | None:intergenic |
ATCCATTCAGCACTTATGAC+AGG | 0.531954 | 4_2:+35394026 | Msa0598560:CDS |
TAATATCAACCGAACATGAC+TGG | 0.532916 | 4_2:+35395160 | Msa0598560:CDS |
ATGCCAATGACAGCATGTAC+AGG | 0.534351 | 4_2:-35395935 | None:intergenic |
ATCATGCCATCCAAAATCCT+TGG | 0.535399 | 4_2:-35393994 | None:intergenic |
TTCATACCTTCCATATCTGT+AGG | 0.537773 | 4_2:-35394072 | None:intergenic |
TCATCTGATCCTCCAGCTGG+TGG | 0.542127 | 4_2:-35394360 | None:intergenic |
AGTTGTGCCTAGTCCTGCCA+AGG | 0.542146 | 4_2:+35393977 | Msa0598560:CDS |
CTGGTCCGAAAATTCTGAGC+AGG | 0.542863 | 4_2:+35395179 | Msa0598560:CDS |
AAATTCTAAATTGTTGGATG+AGG | 0.543261 | 4_2:+35389236 | Msa0598560:CDS |
ATTGGAAAGTATGTTTCATA+CGG | 0.543798 | 4_2:-35395075 | None:intergenic |
GCCAACCAATCTCCATCTCT+CGG | 0.544480 | 4_2:-35389294 | None:intergenic |
GAATGCAAGAAAGAACAGAA+TGG | 0.545134 | 4_2:+35393016 | Msa0598560:CDS |
GCTTTGCCATTACCCTGTCA+AGG | 0.547055 | 4_2:+35389508 | Msa0598560:CDS |
TGTGCATGACATACCTTGAC+AGG | 0.552123 | 4_2:-35389521 | None:intergenic |
TTTGCATATTGGATTTGCTG+AGG | 0.552556 | 4_2:-35393786 | None:intergenic |
ACCTACAGTGGGAATAGTCC+TGG | 0.553103 | 4_2:+35397061 | Msa0598560:three_prime_UTR |
GGCGTTTCGAAACCGAGAGA+TGG | 0.556098 | 4_2:+35389282 | Msa0598560:CDS |
TTTCATACATGACAGCAATC+GGG | 0.557285 | 4_2:+35394871 | Msa0598560:CDS |
CCAATGATGGTCTAGTAACT+CGG | 0.560138 | 4_2:+35394305 | Msa0598560:intron |
CGGTTTCGAAACGCCGGTGA+CGG | 0.566494 | 4_2:-35389274 | None:intergenic |
GACCATAGGTCCTTGTTGGA+CGG | 0.566936 | 4_2:-35397084 | None:intergenic |
TGGACCTTCCAACAAGGCAG+GGG | 0.567412 | 4_2:-35393138 | None:intergenic |
TTAGGATTAGCAAAACTCAA+AGG | 0.568493 | 4_2:-35393163 | None:intergenic |
GGACTATTCCCACTGTAGGT+AGG | 0.570994 | 4_2:-35397058 | None:intergenic |
CCTTGGTACTCTATTGAACA+AGG | 0.571416 | 4_2:+35395120 | Msa0598560:CDS |
GGAAAGTTGTAGACATTGAA+GGG | 0.572421 | 4_2:-35389068 | None:intergenic |
AGCCTATTTAAAGCCTATCT+CGG | 0.573373 | 4_2:+35397108 | Msa0598560:three_prime_UTR |
CCGTTGTTGGAAGTGTACAT+TGG | 0.575888 | 4_2:-35395635 | None:intergenic |
TGTACATGCTGTCATTGGCA+TGG | 0.577657 | 4_2:+35395937 | Msa0598560:CDS |
GTCCTGTCATAAGTGCTGAA+TGG | 0.579771 | 4_2:-35394028 | None:intergenic |
ATTCCTATAAAAGATCAAAA+GGG | 0.581083 | 4_2:+35395878 | Msa0598560:CDS |
GTTCTTCTGAAGCATCAAGA+GGG | 0.581323 | 4_2:-35394419 | None:intergenic |
GTGGACCTTCCAACAAGGCA+GGG | 0.584213 | 4_2:-35393139 | None:intergenic |
ATCTCTCGGTTTCGAAACGC+CGG | 0.585583 | 4_2:-35389280 | None:intergenic |
CTGCAGCAAAGGATAAGCCT+TGG | 0.586086 | 4_2:+35395103 | Msa0598560:CDS |
GTAAGGTCCAAAGTTGAGGA+AGG | 0.587368 | 4_2:-35389090 | None:intergenic |
TCAGAAATTTATTAACGCTG+TGG | 0.590172 | 4_2:+35395673 | Msa0598560:CDS |
GAACATGAAACAGGTTGACT+TGG | 0.593153 | 4_2:+35395790 | Msa0598560:intron |
ATAGATATATTAAAAGGCAA+AGG | 0.597912 | 4_2:+35396859 | Msa0598560:three_prime_UTR |
ATTAGCAAAACTCAAAGGAG+TGG | 0.611195 | 4_2:-35393158 | None:intergenic |
TATTATACCCCTACCTACAG+TGG | 0.614173 | 4_2:+35397049 | Msa0598560:three_prime_UTR |
ATTATACCCCTACCTACAGT+GGG | 0.614795 | 4_2:+35397050 | Msa0598560:three_prime_UTR |
GTTGGATGAGGAGTTTGTCA+CGG | 0.615270 | 4_2:+35389248 | Msa0598560:CDS |
TTCTTCTGAAGCATCAAGAG+GGG | 0.617475 | 4_2:-35394418 | None:intergenic |
GACATGGGTTAGTGGGGACA+AGG | 0.620413 | 4_2:+35393761 | Msa0598560:CDS |
GGTTTGAAAGGAAGAAAATG+TGG | 0.620903 | 4_2:-35388914 | None:intergenic |
GAGATTGACATGGGTTAGTG+GGG | 0.620979 | 4_2:+35393755 | Msa0598560:CDS |
GTAAACTCAGTGTTTCACAT+TGG | 0.623186 | 4_2:+35394771 | Msa0598560:CDS |
TATGTTACTCCTGACTCTGG+TGG | 0.623778 | 4_2:+35395039 | Msa0598560:CDS |
CCTTGTTCAATAGAGTACCA+AGG | 0.623949 | 4_2:-35395120 | None:intergenic |
TTTGAATTAAGGCCAAACAA+AGG | 0.624435 | 4_2:-35388950 | None:intergenic |
ACTATTCCCACTGTAGGTAG+GGG | 0.629903 | 4_2:-35397056 | None:intergenic |
TGTTGCAGATGAGATTGACA+TGG | 0.630845 | 4_2:+35393745 | Msa0598560:intron |
TAAGGTCCAAAGTTGAGGAA+GGG | 0.632550 | 4_2:-35389089 | None:intergenic |
CTTTAAATAGGCTAGACCAT+AGG | 0.637156 | 4_2:-35397098 | None:intergenic |
TTCTCTCATAGTTATGCACA+TGG | 0.637196 | 4_2:-35395823 | None:intergenic |
CCAATGTACACTTCCAACAA+CGG | 0.640358 | 4_2:+35395635 | Msa0598560:CDS |
TGTTCTTCTGAAGCATCAAG+AGG | 0.645423 | 4_2:-35394420 | None:intergenic |
ATAGTCCTGGCCGTCCAACA+AGG | 0.645533 | 4_2:+35397074 | Msa0598560:three_prime_UTR |
CAGCAATCGGGAATCATGAG+AGG | 0.646921 | 4_2:+35394883 | Msa0598560:CDS |
AAGGAGTGGACCTTCCAACA+AGG | 0.647985 | 4_2:-35393144 | None:intergenic |
TACCCCATGAAAATCAGCCA+AGG | 0.655808 | 4_2:-35395342 | None:intergenic |
ACAGGGTAATGGCAAAGCAG+AGG | 0.665481 | 4_2:-35389503 | None:intergenic |
GCCAGGACTATTCCCACTGT+AGG | 0.667457 | 4_2:-35397062 | None:intergenic |
CTTACTCCTACAGATATGGA+AGG | 0.668628 | 4_2:+35394066 | Msa0598560:CDS |
TGCAGTGTGACAACTTGTAG+TGG | 0.671946 | 4_2:+35393043 | Msa0598560:CDS |
ACAGACCAAAACCAAAACCA+AGG | 0.673161 | 4_2:+35388891 | Msa0598560:five_prime_UTR |
GTTGCAGATGAGATTGACAT+GGG | 0.725180 | 4_2:+35393746 | Msa0598560:intron |
GTGCATGACATACCTTGACA+GGG | 0.763616 | 4_2:-35389520 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTTAATTAATATTTTGG+GGG | - | chr4_2:35390117-35390136 | None:intergenic | 10.0% |
!!! | CAAATTTAATTAATATTTTG+GGG | - | chr4_2:35390118-35390137 | None:intergenic | 10.0% |
!!! | GCAAATTTAATTAATATTTT+GGG | - | chr4_2:35390119-35390138 | None:intergenic | 10.0% |
!!! | AGCAAATTTAATTAATATTT+TGG | - | chr4_2:35390120-35390139 | None:intergenic | 10.0% |
!!! | TTTTTTTTCTTTTATTTTGT+TGG | + | chr4_2:35390182-35390201 | Msa0598560:intron | 10.0% |
!! | ATAATATTTATGTATATTGA+AGG | - | chr4_2:35390252-35390271 | None:intergenic | 10.0% |
!! | TTAGTAAAAAAAATTAAACT+CGG | + | chr4_2:35390321-35390340 | Msa0598560:intron | 10.0% |
!! | TATCATTTCATTAATAATAA+TGG | + | chr4_2:35392367-35392386 | Msa0598560:intron | 10.0% |
!! | TCTAATAATTATAAAATGAT+TGG | + | chr4_2:35393722-35393741 | Msa0598560:intron | 10.0% |
!! | AGATTATAGAATTTGAATTA+AGG | - | chr4_2:35388964-35388983 | None:intergenic | 15.0% |
!! | ATTAATTAACATTATAGCAA+TGG | - | chr4_2:35389387-35389406 | None:intergenic | 15.0% |
!!! | GTTCTTTATTTCTAAATAAA+CGG | + | chr4_2:35389615-35389634 | Msa0598560:intron | 15.0% |
!!! | TTCTTTATTTCTAAATAAAC+GGG | + | chr4_2:35389616-35389635 | Msa0598560:intron | 15.0% |
!! | TATAATTCCAAGAAAATAAA+TGG | + | chr4_2:35389829-35389848 | Msa0598560:intron | 15.0% |
!!! | AATTTAATTAATATTTTGGG+GGG | - | chr4_2:35390116-35390135 | None:intergenic | 15.0% |
!! | TACTAAATATAAGAATGTTA+AGG | - | chr4_2:35390307-35390326 | None:intergenic | 15.0% |
!! | TAGTAAAAAAAATTAAACTC+GGG | + | chr4_2:35390322-35390341 | Msa0598560:intron | 15.0% |
!! | ATTTCAGCATTTAATTAAAT+AGG | - | chr4_2:35390416-35390435 | None:intergenic | 15.0% |
!! | ATAAAAAATTAAGGCTTAAA+TGG | - | chr4_2:35391213-35391232 | None:intergenic | 15.0% |
!! | TTTATAAATTTAAATTCCAC+AGG | - | chr4_2:35391586-35391605 | None:intergenic | 15.0% |
!!! | AAACTTTTTAAATTATCTCA+TGG | - | chr4_2:35391684-35391703 | None:intergenic | 15.0% |
!!! | ACTTATTTTTGAATAGAAAA+TGG | + | chr4_2:35391809-35391828 | Msa0598560:intron | 15.0% |
!!! | CTTATTTTTGAATAGAAAAT+GGG | + | chr4_2:35391810-35391829 | Msa0598560:intron | 15.0% |
!! | TGTTATTAAATTCATAATCA+GGG | - | chr4_2:35392092-35392111 | None:intergenic | 15.0% |
!! | ATGTTATTAAATTCATAATC+AGG | - | chr4_2:35392093-35392112 | None:intergenic | 15.0% |
!! | ACTAATCACATTATTTATTA+TGG | - | chr4_2:35392413-35392432 | None:intergenic | 15.0% |
!!! | AATAAATAATGTGATTAGTT+AGG | + | chr4_2:35392414-35392433 | Msa0598560:intron | 15.0% |
!!! | ATAAATAATGTGATTAGTTA+GGG | + | chr4_2:35392415-35392434 | Msa0598560:intron | 15.0% |
!! | GAAAAATAAAATTATATCAG+TGG | + | chr4_2:35392555-35392574 | Msa0598560:intron | 15.0% |
!!! | GACTAACTAATATTTTTATA+GGG | - | chr4_2:35393446-35393465 | None:intergenic | 15.0% |
!!! | AGACTAACTAATATTTTTAT+AGG | - | chr4_2:35393447-35393466 | None:intergenic | 15.0% |
!! | ATTTCAAATTAAATAAGCTT+TGG | + | chr4_2:35394463-35394482 | Msa0598560:intron | 15.0% |
!! | ATTTAAGCAAATGAAAATAA+TGG | + | chr4_2:35394569-35394588 | Msa0598560:intron | 15.0% |
!!! | TAACAATATTTTAAAGACAA+AGG | - | chr4_2:35395566-35395585 | None:intergenic | 15.0% |
!!! | TGATTTTTTCAAATTATTAG+CGG | - | chr4_2:35396149-35396168 | None:intergenic | 15.0% |
!! | AAAAAAATCATAAGCATAAA+TGG | - | chr4_2:35396455-35396474 | None:intergenic | 15.0% |
!! | ATATGATAAATTACAAAACA+AGG | - | chr4_2:35396646-35396665 | None:intergenic | 15.0% |
!! | ACACATATAGATATATTAAA+AGG | + | chr4_2:35396853-35396872 | Msa0598560:three_prime_UTR | 15.0% |
!!! | AACAAGATTTTATTGATTAT+AGG | - | chr4_2:35396969-35396988 | None:intergenic | 15.0% |
!! | ATCATCATTACTATAAGAAA+AGG | + | chr4_2:35388849-35388868 | Msa0598560:five_prime_UTR | 20.0% |
!!! | TCTTTATTTCTAAATAAACG+GGG | + | chr4_2:35389617-35389636 | Msa0598560:intron | 20.0% |
!! | TTGTTTGGCAAATTATTAAT+TGG | + | chr4_2:35389726-35389745 | Msa0598560:intron | 20.0% |
!! | AAATATCAATAAACATCCAA+AGG | - | chr4_2:35389803-35389822 | None:intergenic | 20.0% |
!!! | TAACTTTCCATTTATTTTCT+TGG | - | chr4_2:35389839-35389858 | None:intergenic | 20.0% |
!! | GCATAATATATATAAAGTCT+GGG | - | chr4_2:35390015-35390034 | None:intergenic | 20.0% |
!! | TGCATAATATATATAAAGTC+TGG | - | chr4_2:35390016-35390035 | None:intergenic | 20.0% |
!! | AGTAAAAAAAATTAAACTCG+GGG | + | chr4_2:35390323-35390342 | Msa0598560:intron | 20.0% |
!! | CTACTAAATTAGCATTTAAT+TGG | + | chr4_2:35390474-35390493 | Msa0598560:intron | 20.0% |
!! | ATGTTAAATATAACTGACAA+TGG | - | chr4_2:35390709-35390728 | None:intergenic | 20.0% |
!! | TATATTATCAGTTATTCAGT+TGG | + | chr4_2:35390921-35390940 | Msa0598560:intron | 20.0% |
!! | AAACAAAAGATAGTTACATA+TGG | + | chr4_2:35391077-35391096 | Msa0598560:intron | 20.0% |
!!! | TGTGATTTTAGAAATAGTTA+TGG | - | chr4_2:35391714-35391733 | None:intergenic | 20.0% |
!!! | TCTAAAATCACATTTACAAT+TGG | + | chr4_2:35391722-35391741 | Msa0598560:intron | 20.0% |
!!! | GTTTATTTTTTATGTAGTGT+CGG | - | chr4_2:35391791-35391810 | None:intergenic | 20.0% |
!! | AGATATAGTAGATTTACATA+TGG | - | chr4_2:35392759-35392778 | None:intergenic | 20.0% |
!! | CTGATTAATAACTAAAATGT+AGG | + | chr4_2:35392946-35392965 | Msa0598560:intron | 20.0% |
!! | TCAAAATCCATTATATATTG+CGG | - | chr4_2:35393303-35393322 | None:intergenic | 20.0% |
!! | AAATTAAACTCTTTCATGTT+CGG | - | chr4_2:35393491-35393510 | None:intergenic | 20.0% |
!! | AACAAATACTTATATGAACA+TGG | - | chr4_2:35393881-35393900 | None:intergenic | 20.0% |
!!! | TTTTTCCATCTTAAATTGAT+AGG | + | chr4_2:35393951-35393970 | Msa0598560:intron | 20.0% |
!!! | TTTGCTTAAATTTTTGTGTT+CGG | - | chr4_2:35394560-35394579 | None:intergenic | 20.0% |
!!! | TAGTTCAGTTTTTAAAACAT+TGG | - | chr4_2:35395394-35395413 | None:intergenic | 20.0% |
!! | ATTCCTATAAAAGATCAAAA+GGG | + | chr4_2:35395878-35395897 | Msa0598560:CDS | 20.0% |
!!! | ATAATGATTGTTCTAAATTG+TGG | + | chr4_2:35396025-35396044 | Msa0598560:intron | 20.0% |
!! | TCAAACCTTTATATATATTG+CGG | + | chr4_2:35396331-35396350 | Msa0598560:intron | 20.0% |
!! | TAGAAATGATTTAAACTTAG+AGG | + | chr4_2:35396576-35396595 | Msa0598560:CDS | 20.0% |
!! | ATAGATATATTAAAAGGCAA+AGG | + | chr4_2:35396859-35396878 | Msa0598560:three_prime_UTR | 20.0% |
! | TAGTAATGATGATAACTCTT+AGG | - | chr4_2:35388842-35388861 | None:intergenic | 25.0% |
! | TTTCCATTCATATTCATTCA+TGG | + | chr4_2:35388987-35389006 | Msa0598560:exon | 25.0% |
! | ATTCCATGAATGAATATGAA+TGG | - | chr4_2:35388993-35389012 | None:intergenic | 25.0% |
!!! | CTGATAATGCAGTAAAATTT+TGG | - | chr4_2:35389140-35389159 | None:intergenic | 25.0% |
!! | TTACTGCATTATCAGATTTT+AGG | + | chr4_2:35389145-35389164 | Msa0598560:CDS | 25.0% |
!! | CTGATATTCAGTTTAAGATA+AGG | - | chr4_2:35389213-35389232 | None:intergenic | 25.0% |
! | AAATTCTAAATTGTTGGATG+AGG | + | chr4_2:35389236-35389255 | Msa0598560:CDS | 25.0% |
! | TATTCTTACTTGGAATTTGA+AGG | - | chr4_2:35389330-35389349 | None:intergenic | 25.0% |
! | TCCAAGTAAGAATATTACAT+TGG | + | chr4_2:35389336-35389355 | Msa0598560:intron | 25.0% |
! | ACCAATGTAATATTCTTACT+TGG | - | chr4_2:35389340-35389359 | None:intergenic | 25.0% |
! | GAGTTCTATTATTTACAAAC+TGG | + | chr4_2:35389464-35389483 | Msa0598560:CDS | 25.0% |
!!! | CTTTATTTCTAAATAAACGG+GGG | + | chr4_2:35389618-35389637 | Msa0598560:intron | 25.0% |
!!! | TATATTACTACTAGCTTGTT+TGG | + | chr4_2:35389711-35389730 | Msa0598560:intron | 25.0% |
!! | TCCATCATTTTATATTGTCA+AGG | + | chr4_2:35389861-35389880 | Msa0598560:intron | 25.0% |
!! | CCATCATTTTATATTGTCAA+GGG | + | chr4_2:35389862-35389881 | Msa0598560:intron | 25.0% |
! | TATGAAAACAATAGTTGTGT+TGG | + | chr4_2:35390269-35390288 | Msa0598560:intron | 25.0% |
! | TAGTAGCATGAATGAATTAT+GGG | - | chr4_2:35390460-35390479 | None:intergenic | 25.0% |
! | TTAGTAGCATGAATGAATTA+TGG | - | chr4_2:35390461-35390480 | None:intergenic | 25.0% |
! | AAATATAACTGACAATGGAT+TGG | - | chr4_2:35390704-35390723 | None:intergenic | 25.0% |
! | AAGTTATGTAGCTAATGATA+CGG | - | chr4_2:35390764-35390783 | None:intergenic | 25.0% |
! | GATAGAGTTTAAACTTCAAA+AGG | - | chr4_2:35390796-35390815 | None:intergenic | 25.0% |
!!! | TCTTTTGTTTATGCAATAAG+AGG | - | chr4_2:35391067-35391086 | None:intergenic | 25.0% |
!!! | TCAAGAGAGCATATTTTTTT+TGG | - | chr4_2:35391444-35391463 | None:intergenic | 25.0% |
!!! | ACATTGTTTTGATCTCAATT+TGG | - | chr4_2:35391504-35391523 | None:intergenic | 25.0% |
! | GAATATCATGATAGAGAATT+GGG | - | chr4_2:35391873-35391892 | None:intergenic | 25.0% |
! | AGAATATCATGATAGAGAAT+TGG | - | chr4_2:35391874-35391893 | None:intergenic | 25.0% |
! | TTTGTCTTGATTATACTACT+TGG | - | chr4_2:35392034-35392053 | None:intergenic | 25.0% |
! | TATAATCAAGACAAACCAAA+GGG | + | chr4_2:35392039-35392058 | Msa0598560:intron | 25.0% |
! | TAAGCTTCGTATTCAATTTA+AGG | - | chr4_2:35392137-35392156 | None:intergenic | 25.0% |
! | AAATTGAATACGAAGCTTAA+AGG | + | chr4_2:35392138-35392157 | Msa0598560:intron | 25.0% |
!!! | ATAATGGATTCAATACAACT+TGG | + | chr4_2:35392383-35392402 | Msa0598560:intron | 25.0% |
!!! | TAATGGATTCAATACAACTT+GGG | + | chr4_2:35392384-35392403 | Msa0598560:intron | 25.0% |
! | ATGCAATTGCTCTATTTATA+AGG | - | chr4_2:35392638-35392657 | None:intergenic | 25.0% |
! | TATTGAAGTTTGAAGGATTT+GGG | - | chr4_2:35392713-35392732 | None:intergenic | 25.0% |
! | ATAGTAGATTTACATATGGT+TGG | - | chr4_2:35392755-35392774 | None:intergenic | 25.0% |
! | ATCATTTATTACGATATGCA+GGG | + | chr4_2:35393244-35393263 | Msa0598560:intron | 25.0% |
!!! | ATATGCAGGGTTTTAAATAA+AGG | + | chr4_2:35393257-35393276 | Msa0598560:intron | 25.0% |
! | TACTGAAAACTTTGATATTG+CGG | + | chr4_2:35394121-35394140 | Msa0598560:intron | 25.0% |
!!! | ATTTGATTTTGTTCCAATGA+TGG | + | chr4_2:35394292-35394311 | Msa0598560:intron | 25.0% |
!! | ATTGGAAAGTATGTTTCATA+CGG | - | chr4_2:35395078-35395097 | None:intergenic | 25.0% |
!! | TTTTTGTATTGCAGTATAAC+TGG | + | chr4_2:35395280-35395299 | Msa0598560:intron | 25.0% |
!! | TTACTACAATTCCGTTATTT+TGG | - | chr4_2:35395498-35395517 | None:intergenic | 25.0% |
!! | AAATAACGGAATTGTAGTAA+AGG | + | chr4_2:35395498-35395517 | Msa0598560:intron | 25.0% |
! | GTTTCAAATTAATCTTGAAC+TGG | - | chr4_2:35395524-35395543 | None:intergenic | 25.0% |
!! | ATAAGTTAGCTTCTTATACA+AGG | - | chr4_2:35395761-35395780 | None:intergenic | 25.0% |
!! | CTTTTGATCTTTTATAGGAA+TGG | - | chr4_2:35395879-35395898 | None:intergenic | 25.0% |
! | CATTCCTATAAAAGATCAAA+AGG | + | chr4_2:35395877-35395896 | Msa0598560:CDS | 25.0% |
! | ATTGTTTGAGAATTTGTCTA+AGG | - | chr4_2:35395972-35395991 | None:intergenic | 25.0% |
! | TTCAGTGTAATTATATGTGT+CGG | + | chr4_2:35396174-35396193 | Msa0598560:intron | 25.0% |
! | AATCATAATTACGTCTTTGT+CGG | - | chr4_2:35396289-35396308 | None:intergenic | 25.0% |
! | AAGACGTAATTATGATTACT+AGG | + | chr4_2:35396292-35396311 | Msa0598560:intron | 25.0% |
! | ATAGACATATGTCTAAATTG+CGG | - | chr4_2:35396376-35396395 | None:intergenic | 25.0% |
!! | GAATAGAAAGTATAAGAAGA+GGG | - | chr4_2:35396410-35396429 | None:intergenic | 25.0% |
!! | AGAATAGAAAGTATAAGAAG+AGG | - | chr4_2:35396411-35396430 | None:intergenic | 25.0% |
! | GAATAGTAATTATATGAGGT+TGG | - | chr4_2:35396624-35396643 | None:intergenic | 25.0% |
! | CAAGGAATAGTAATTATATG+AGG | - | chr4_2:35396628-35396647 | None:intergenic | 25.0% |
!!! | TTTTGTGTGATTGGTTTGAA+AGG | - | chr4_2:35388929-35388948 | None:intergenic | 30.0% |
! | AACAAAGGTTTTTGTGTGAT+TGG | - | chr4_2:35388938-35388957 | None:intergenic | 30.0% |
ATCACACAAAAACCTTTGTT+TGG | + | chr4_2:35388938-35388957 | Msa0598560:five_prime_UTR | 30.0% | |
TTTGAATTAAGGCCAAACAA+AGG | - | chr4_2:35388953-35388972 | None:intergenic | 30.0% | |
ATTCATGGAATCCTCAAATT+GGG | + | chr4_2:35389002-35389021 | Msa0598560:exon | 30.0% | |
ATTTAGTGTGTTTAACCGTA+AGG | - | chr4_2:35389110-35389129 | None:intergenic | 30.0% | |
!! | TGCAGTAAAATTTTGGTGTA+AGG | - | chr4_2:35389133-35389152 | None:intergenic | 30.0% |
CAGCTCAAATTCTAAATTGT+TGG | + | chr4_2:35389230-35389249 | Msa0598560:CDS | 30.0% | |
!! | TCCCTTTGAGATTAATGATA+TGG | + | chr4_2:35389592-35389611 | Msa0598560:intron | 30.0% |
CCCATATCATTAATCTCAAA+GGG | - | chr4_2:35389596-35389615 | None:intergenic | 30.0% | |
!! | CCCTTTGAGATTAATGATAT+GGG | + | chr4_2:35389593-35389612 | Msa0598560:intron | 30.0% |
ACCCATATCATTAATCTCAA+AGG | - | chr4_2:35389597-35389616 | None:intergenic | 30.0% | |
ACGGGGGAAAATTAATAAAA+AGG | + | chr4_2:35389634-35389653 | Msa0598560:intron | 30.0% | |
CGGGGGAAAATTAATAAAAA+GGG | + | chr4_2:35389635-35389654 | Msa0598560:intron | 30.0% | |
TTAATAAAAAGGGAACAACG+AGG | + | chr4_2:35389645-35389664 | Msa0598560:intron | 30.0% | |
CCCTTGACAATATAAAATGA+TGG | - | chr4_2:35389865-35389884 | None:intergenic | 30.0% | |
!!! | GAATGGTCTGTTTTTTTTGT+CGG | + | chr4_2:35389980-35389999 | Msa0598560:intron | 30.0% |
AAAAAAAATTAAACTCGGGG+AGG | + | chr4_2:35390326-35390345 | Msa0598560:intron | 30.0% | |
ATTAGCATTTAATTGGTCGT+TGG | + | chr4_2:35390481-35390500 | Msa0598560:intron | 30.0% | |
TGTATGAAGATATAGCTATG+TGG | - | chr4_2:35390509-35390528 | None:intergenic | 30.0% | |
!! | AGAGTATTGCTTATCATCAA+AGG | + | chr4_2:35390563-35390582 | Msa0598560:intron | 30.0% |
ATCATCAAAGGATTTAAACG+TGG | + | chr4_2:35390575-35390594 | Msa0598560:intron | 30.0% | |
TATACCGTGTGAATCTTAAT+CGG | - | chr4_2:35390821-35390840 | None:intergenic | 30.0% | |
AATTATTTGAACCAGATGTG+TGG | - | chr4_2:35391043-35391062 | None:intergenic | 30.0% | |
CCTTAACCAAAACATCTTAT+AGG | - | chr4_2:35391538-35391557 | None:intergenic | 30.0% | |
!!! | CCTATAAGATGTTTTGGTTA+AGG | + | chr4_2:35391535-35391554 | Msa0598560:intron | 30.0% |
!!! | ATAAGATGTTTTGGTTAAGG+TGG | + | chr4_2:35391538-35391557 | Msa0598560:intron | 30.0% |
!! | TTTTGGTTAAGGTGGAATAA+AGG | + | chr4_2:35391546-35391565 | Msa0598560:intron | 30.0% |
TTTAAATTCCACAGGCAAAT+AGG | - | chr4_2:35391578-35391597 | None:intergenic | 30.0% | |
GTATAATCAAGACAAACCAA+AGG | + | chr4_2:35392038-35392057 | Msa0598560:intron | 30.0% | |
AAGCTTAAAGGTAAGTAAAC+TGG | + | chr4_2:35392150-35392169 | Msa0598560:intron | 30.0% | |
! | AATGTGATTAGTTAGGGAAA+TGG | + | chr4_2:35392421-35392440 | Msa0598560:intron | 30.0% |
TATTAGGCGACAAATGAATT+CGG | - | chr4_2:35392471-35392490 | None:intergenic | 30.0% | |
GGTCTAGAAGATTAATTACT+TGG | + | chr4_2:35392576-35392595 | Msa0598560:intron | 30.0% | |
AGATTAATTACTTGGCTAGT+CGG | + | chr4_2:35392584-35392603 | Msa0598560:intron | 30.0% | |
ATTGAAGTTTGAAGGATTTG+GGG | - | chr4_2:35392712-35392731 | None:intergenic | 30.0% | |
CTATTGAAGTTTGAAGGATT+TGG | - | chr4_2:35392714-35392733 | None:intergenic | 30.0% | |
CACATACTATTGAAGTTTGA+AGG | - | chr4_2:35392720-35392739 | None:intergenic | 30.0% | |
TTCAATAGTATGTGCTAATG+TGG | + | chr4_2:35392726-35392745 | Msa0598560:intron | 30.0% | |
!!! | TTTTTCAAGGTGAATAAGTG+AGG | - | chr4_2:35392865-35392884 | None:intergenic | 30.0% |
!!! | GCTAGAATTCACTTTTTTCA+AGG | - | chr4_2:35392878-35392897 | None:intergenic | 30.0% |
!!! | TTTTTTGTCAGATTGCATAG+TGG | - | chr4_2:35392900-35392919 | None:intergenic | 30.0% |
AATGCAAGAAAGAACAGAAT+GGG | + | chr4_2:35393017-35393036 | Msa0598560:CDS | 30.0% | |
! | TTAGGATTAGCAAAACTCAA+AGG | - | chr4_2:35393166-35393185 | None:intergenic | 30.0% |
CTGCATATCGTAATAAATGA+TGG | - | chr4_2:35393245-35393264 | None:intergenic | 30.0% | |
CATCATTTATTACGATATGC+AGG | + | chr4_2:35393243-35393262 | Msa0598560:intron | 30.0% | |
! | TTAGATTATGTGATGATGAG+CGG | - | chr4_2:35393707-35393726 | None:intergenic | 30.0% |
!! | CTGTTTTTCCATTTGCATAT+TGG | - | chr4_2:35393800-35393819 | None:intergenic | 30.0% |
CTGAACCTATCAATTTAAGA+TGG | - | chr4_2:35393959-35393978 | None:intergenic | 30.0% | |
! | ATTCATTTCCTTTGGTGATA+TGG | + | chr4_2:35394389-35394408 | Msa0598560:CDS | 30.0% |
! | TTCATTTCCTTTGGTGATAT+GGG | + | chr4_2:35394390-35394409 | Msa0598560:CDS | 30.0% |
! | ACATCTTCAATTTGAAGTGT+CGG | + | chr4_2:35394652-35394671 | Msa0598560:intron | 30.0% |
CTGTTCAAATTCAATCAAGA+TGG | - | chr4_2:35394697-35394716 | None:intergenic | 30.0% | |
AAACACTGAGTTTACATTGT+TGG | - | chr4_2:35394766-35394785 | None:intergenic | 30.0% | |
! | TTTTACCTGCTCAGAATTTT+CGG | - | chr4_2:35395187-35395206 | None:intergenic | 30.0% |
TTAATAGACAACATACTCCT+TGG | + | chr4_2:35395325-35395344 | Msa0598560:CDS | 30.0% | |
AAAGACAAAGGAAAACTAGA+TGG | - | chr4_2:35395554-35395573 | None:intergenic | 30.0% | |
TTTAGATGATAATCCGTTGT+TGG | - | chr4_2:35395651-35395670 | None:intergenic | 30.0% | |
TCAGAAATTTATTAACGCTG+TGG | + | chr4_2:35395673-35395692 | Msa0598560:CDS | 30.0% | |
! | ACTCCCTTTTGATCTTTTAT+AGG | - | chr4_2:35395884-35395903 | None:intergenic | 30.0% |
! | CAAACTCAGAAATCCTTTTT+AGG | - | chr4_2:35396534-35396553 | None:intergenic | 30.0% |
CTAAAAAGGATTTCTGAGTT+TGG | + | chr4_2:35396532-35396551 | Msa0598560:CDS | 30.0% | |
ATCAGATACAAGAGAAGTTA+AGG | + | chr4_2:35396730-35396749 | Msa0598560:CDS | 30.0% | |
AGAAACAAATGCAGAATTGT+AGG | + | chr4_2:35396798-35396817 | Msa0598560:three_prime_UTR | 30.0% | |
CCGATTATGACAAGAAATAA+GGG | - | chr4_2:35397004-35397023 | None:intergenic | 30.0% | |
! | CCCTTATTTCTTGTCATAAT+CGG | + | chr4_2:35397001-35397020 | Msa0598560:three_prime_UTR | 30.0% |
! | CCTTATTTCTTGTCATAATC+GGG | + | chr4_2:35397002-35397021 | Msa0598560:three_prime_UTR | 30.0% |
GGTTTGAAAGGAAGAAAATG+TGG | - | chr4_2:35388917-35388936 | None:intergenic | 35.0% | |
CATTCATGGAATCCTCAAAT+TGG | + | chr4_2:35389001-35389020 | Msa0598560:exon | 35.0% | |
ATGTTTGAGAACCCAATTTG+AGG | - | chr4_2:35389016-35389035 | None:intergenic | 35.0% | |
TAGACATTGAAGGGCTAATA+AGG | - | chr4_2:35389062-35389081 | None:intergenic | 35.0% | |
GGAAAGTTGTAGACATTGAA+GGG | - | chr4_2:35389071-35389090 | None:intergenic | 35.0% | |
ACGAGGATTTGTGATATTGA+TGG | + | chr4_2:35389662-35389681 | Msa0598560:intron | 35.0% | |
!! | GATGGTTTCTAGTAATAGCA+TGG | + | chr4_2:35389680-35389699 | Msa0598560:intron | 35.0% |
GAAGATAAGGTGGTTGAAAA+TGG | - | chr4_2:35389760-35389779 | None:intergenic | 35.0% | |
AATTATCCTCGAAGATAAGG+TGG | - | chr4_2:35389770-35389789 | None:intergenic | 35.0% | |
CAATAAACATCCAAAGGTTG+TGG | - | chr4_2:35389797-35389816 | None:intergenic | 35.0% | |
AAAACAGACCATTCCATTTG+AGG | - | chr4_2:35389974-35389993 | None:intergenic | 35.0% | |
!! | ATATTTTGGGGGGTTTTCAT+CGG | - | chr4_2:35390106-35390125 | None:intergenic | 35.0% |
GTATATTGAAGGTGACAACT+TGG | - | chr4_2:35390241-35390260 | None:intergenic | 35.0% | |
AAGCAATACTCTCAATCACA+AGG | - | chr4_2:35390555-35390574 | None:intergenic | 35.0% | |
TTTAAACGTGGACCATTCAA+AGG | + | chr4_2:35390587-35390606 | Msa0598560:intron | 35.0% | |
CCACGTTTAAATCCTTTGAA+TGG | - | chr4_2:35390602-35390621 | None:intergenic | 35.0% | |
CCATTCAAAGGATTTAAACG+TGG | + | chr4_2:35390599-35390618 | Msa0598560:intron | 35.0% | |
TCAACCGATTAAGATTCACA+CGG | + | chr4_2:35390814-35390833 | Msa0598560:intron | 35.0% | |
ACATGTCTTTATCAATGCAG+TGG | + | chr4_2:35390992-35391011 | Msa0598560:intron | 35.0% | |
CATGTCTTTATCAATGCAGT+GGG | + | chr4_2:35390993-35391012 | Msa0598560:intron | 35.0% | |
ATGTCTTTATCAATGCAGTG+GGG | + | chr4_2:35390994-35391013 | Msa0598560:intron | 35.0% | |
!! | CTGTATGATTTTGACGTGTT+GGG | - | chr4_2:35391136-35391155 | None:intergenic | 35.0% |
!! | TCTGTATGATTTTGACGTGT+TGG | - | chr4_2:35391137-35391156 | None:intergenic | 35.0% |
GATATAGTACCTGTCATAGT+AGG | + | chr4_2:35391402-35391421 | Msa0598560:intron | 35.0% | |
GAGATCAAAACAATGTTTCG+TGG | + | chr4_2:35391508-35391527 | Msa0598560:intron | 35.0% | |
! | GGCATTCCTATAAGATGTTT+TGG | + | chr4_2:35391529-35391548 | Msa0598560:intron | 35.0% |
! | TGTCCTCTTTTATCTCTTTG+CGG | - | chr4_2:35391963-35391982 | None:intergenic | 35.0% |
CATGAAGAAAACTACGACTT+CGG | + | chr4_2:35392181-35392200 | Msa0598560:intron | 35.0% | |
! | TACTTCTTTTCCTAACTCCT+GGG | - | chr4_2:35392501-35392520 | None:intergenic | 35.0% |
GACATGCATTGTTATATGCT+GGG | + | chr4_2:35392817-35392836 | Msa0598560:intron | 35.0% | |
ACATGCATTGTTATATGCTG+GGG | + | chr4_2:35392818-35392837 | Msa0598560:intron | 35.0% | |
! | TTTTTGCAGCTCATGTAATC+TGG | - | chr4_2:35392992-35393011 | None:intergenic | 35.0% |
GAATGCAAGAAAGAACAGAA+TGG | + | chr4_2:35393016-35393035 | Msa0598560:CDS | 35.0% | |
ATAGAGTTTGTGTTCTTCAC+TGG | + | chr4_2:35393103-35393122 | Msa0598560:CDS | 35.0% | |
ATTAGCAAAACTCAAAGGAG+TGG | - | chr4_2:35393161-35393180 | None:intergenic | 35.0% | |
! | AATCCTAAGAAGCCACTTTA+TGG | + | chr4_2:35393178-35393197 | Msa0598560:CDS | 35.0% |
CTTGAGATATGTCCATAAAG+TGG | - | chr4_2:35393193-35393212 | None:intergenic | 35.0% | |
!!! | GGGTTTTAAATAAAGGTTCG+CGG | + | chr4_2:35393264-35393283 | Msa0598560:intron | 35.0% |
AGAGAATTACGGTCAAATGT+GGG | - | chr4_2:35393368-35393387 | None:intergenic | 35.0% | |
!!! | AGGGTTTTAAATAGAGATCG+CGG | - | chr4_2:35393427-35393446 | None:intergenic | 35.0% |
TAAACTCTTTCATGTTCGGT+TGG | - | chr4_2:35393487-35393506 | None:intergenic | 35.0% | |
GATTTGTGATTTCGAAACAG+TGG | - | chr4_2:35393540-35393559 | None:intergenic | 35.0% | |
!! | TTTGCATATTGGATTTGCTG+AGG | - | chr4_2:35393789-35393808 | None:intergenic | 35.0% |
CAGCAAATCCAATATGCAAA+TGG | + | chr4_2:35393789-35393808 | Msa0598560:CDS | 35.0% | |
TTCATACCTTCCATATCTGT+AGG | - | chr4_2:35394075-35394094 | None:intergenic | 35.0% | |
GAGCTCAAATTCATTTCCTT+TGG | + | chr4_2:35394381-35394400 | Msa0598560:CDS | 35.0% | |
TTCAGAAGAACACTACATTC+AGG | + | chr4_2:35394431-35394450 | Msa0598560:CDS | 35.0% | |
ACGCATTAAGAAATGACTAG+TGG | + | chr4_2:35394508-35394527 | Msa0598560:intron | 35.0% | |
TTGATTGAATTTGAACAGCC+TGG | + | chr4_2:35394699-35394718 | Msa0598560:intron | 35.0% | |
GTAAACTCAGTGTTTCACAT+TGG | + | chr4_2:35394771-35394790 | Msa0598560:CDS | 35.0% | |
!!! | AACTGGTTTTCTAGCAGAAT+GGG | + | chr4_2:35394809-35394828 | Msa0598560:CDS | 35.0% |
TTGAAGCTACTGGACTAATA+AGG | - | chr4_2:35394848-35394867 | None:intergenic | 35.0% | |
TATGAAACTCTTGAAGCTAC+TGG | - | chr4_2:35394858-35394877 | None:intergenic | 35.0% | |
GTTTCATACATGACAGCAAT+CGG | + | chr4_2:35394870-35394889 | Msa0598560:CDS | 35.0% | |
TTTCATACATGACAGCAATC+GGG | + | chr4_2:35394871-35394890 | Msa0598560:CDS | 35.0% | |
!! | TTCAGAGATTATGTCGATTC+TGG | + | chr4_2:35395009-35395028 | Msa0598560:intron | 35.0% |
TAATATCAACCGAACATGAC+TGG | + | chr4_2:35395160-35395179 | Msa0598560:CDS | 35.0% | |
GCAGTATAACTGGATGAAAA+AGG | + | chr4_2:35395290-35395309 | Msa0598560:intron | 35.0% | |
TAACTGGATGAAAAAGGACA+TGG | + | chr4_2:35395296-35395315 | Msa0598560:CDS | 35.0% | |
!!! | CTACAATTCCGTTATTTTGG+CGG | - | chr4_2:35395495-35395514 | None:intergenic | 35.0% |
GTACATTGTGAACATGAAAC+AGG | + | chr4_2:35395781-35395800 | Msa0598560:intron | 35.0% | |
TTCTCTCATAGTTATGCACA+TGG | - | chr4_2:35395826-35395845 | None:intergenic | 35.0% | |
! | ATAGAAAAGAGTGTGACGAA+AGG | - | chr4_2:35396007-35396026 | None:intergenic | 35.0% |
! | AGAAAGTATAAGAAGAGGGA+AGG | - | chr4_2:35396406-35396425 | None:intergenic | 35.0% |
GTATGAATGTTCTGTTGCAT+TGG | + | chr4_2:35396491-35396510 | Msa0598560:intron | 35.0% | |
CCCGATTATGACAAGAAATA+AGG | - | chr4_2:35397005-35397024 | None:intergenic | 35.0% | |
CTTTAAATAGGCTAGACCAT+AGG | - | chr4_2:35397101-35397120 | None:intergenic | 35.0% | |
ACAGACCAAAACCAAAACCA+AGG | + | chr4_2:35388891-35388910 | Msa0598560:five_prime_UTR | 40.0% | |
!! | AGAAAATGTGGCCTTGGTTT+TGG | - | chr4_2:35388905-35388924 | None:intergenic | 40.0% |
AAAGGAAGAAAATGTGGCCT+TGG | - | chr4_2:35388911-35388930 | None:intergenic | 40.0% | |
GGGAAAGTTGTAGACATTGA+AGG | - | chr4_2:35389072-35389091 | None:intergenic | 40.0% | |
AACTTTCCCTTCCTCAACTT+TGG | + | chr4_2:35389083-35389102 | Msa0598560:CDS | 40.0% | |
TAAGGTCCAAAGTTGAGGAA+GGG | - | chr4_2:35389092-35389111 | None:intergenic | 40.0% | |
TTCCTCAACTTTGGACCTTA+CGG | + | chr4_2:35389092-35389111 | Msa0598560:CDS | 40.0% | |
TTTCAACCACCTTATCTTCG+AGG | + | chr4_2:35389761-35389780 | Msa0598560:intron | 40.0% | |
GGGAATTATCCTCGAAGATA+AGG | - | chr4_2:35389773-35389792 | None:intergenic | 40.0% | |
ATAATTCCCACCACAACCTT+TGG | + | chr4_2:35389784-35389803 | Msa0598560:intron | 40.0% | |
AAACATCCAAAGGTTGTGGT+GGG | - | chr4_2:35389793-35389812 | None:intergenic | 40.0% | |
TAAACATCCAAAGGTTGTGG+TGG | - | chr4_2:35389794-35389813 | None:intergenic | 40.0% | |
! | CATCGTGAATTTAGCTCAGT+TGG | - | chr4_2:35390048-35390067 | None:intergenic | 40.0% |
TGCAAACCGTTCAATGAAAC+TGG | - | chr4_2:35390626-35390645 | None:intergenic | 40.0% | |
!! | AATGGATTGGTTCAGATGGA+GGG | - | chr4_2:35390664-35390683 | None:intergenic | 40.0% |
!! | AAATGGATTGGTTCAGATGG+AGG | - | chr4_2:35390665-35390684 | None:intergenic | 40.0% |
!! | TCGAAATGGATTGGTTCAGA+TGG | - | chr4_2:35390668-35390687 | None:intergenic | 40.0% |
!! | AATGGATTGGTTCAGATGGA+GGG | - | chr4_2:35390664-35390683 | None:intergenic | 40.0% |
!! | TGACAATGGATTGGTTCAGA+TGG | - | chr4_2:35390695-35390714 | None:intergenic | 40.0% |
AGATTCACACGGTATATGCA+TGG | + | chr4_2:35390825-35390844 | Msa0598560:intron | 40.0% | |
! | CAGCTCTATGGATTTGAGAT+TGG | - | chr4_2:35390947-35390966 | None:intergenic | 40.0% |
ACCAGATGTGTGGATATTGA+GGG | - | chr4_2:35391033-35391052 | None:intergenic | 40.0% | |
AACCAGATGTGTGGATATTG+AGG | - | chr4_2:35391034-35391053 | None:intergenic | 40.0% | |
! | GTGCTATTGAGATCGTAATG+AGG | - | chr4_2:35391188-35391207 | None:intergenic | 40.0% |
TACCTGTCATAGTAGGAACA+TGG | + | chr4_2:35391409-35391428 | Msa0598560:intron | 40.0% | |
GGTATATTCCTATTTGCCTG+TGG | + | chr4_2:35391567-35391586 | Msa0598560:intron | 40.0% | |
CTTTGCGGCACTTATGTTAT+GGG | - | chr4_2:35391948-35391967 | None:intergenic | 40.0% | |
TCTTTGCGGCACTTATGTTA+TGG | - | chr4_2:35391949-35391968 | None:intergenic | 40.0% | |
ATCAAGACAAACCAAAGGGT+TGG | + | chr4_2:35392043-35392062 | Msa0598560:intron | 40.0% | |
ACTCCTGGGTAGTGTTTATT+AGG | - | chr4_2:35392487-35392506 | None:intergenic | 40.0% | |
ATAAACACTACCCAGGAGTT+AGG | + | chr4_2:35392488-35392507 | Msa0598560:intron | 40.0% | |
! | CTACTTCTTTTCCTAACTCC+TGG | - | chr4_2:35392502-35392521 | None:intergenic | 40.0% |
GAAGGATTTGGGGAATCATA+AGG | - | chr4_2:35392702-35392721 | None:intergenic | 40.0% | |
TACCAACAGAGCTATACTCA+CGG | - | chr4_2:35392795-35392814 | None:intergenic | 40.0% | |
! | TGAGTATAGCTCTGTTGGTA+GGG | + | chr4_2:35392795-35392814 | Msa0598560:intron | 40.0% |
GGACATGCATTGTTATATGC+TGG | + | chr4_2:35392816-35392835 | Msa0598560:intron | 40.0% | |
TGTCCATAAAGTGGCTTCTT+AGG | - | chr4_2:35393184-35393203 | None:intergenic | 40.0% | |
ACTTGGGCCGCAATATATAA+TGG | + | chr4_2:35393293-35393312 | Msa0598560:intron | 40.0% | |
CAGAGAATTACGGTCAAATG+TGG | - | chr4_2:35393369-35393388 | None:intergenic | 40.0% | |
CCTTAGACTGCAGAGAATTA+CGG | - | chr4_2:35393379-35393398 | None:intergenic | 40.0% | |
CGTAATTCTCTGCAGTCTAA+GGG | + | chr4_2:35393377-35393396 | Msa0598560:intron | 40.0% | |
!! | ATGATGAGCGGTTGTTTTGT+CGG | - | chr4_2:35393695-35393714 | None:intergenic | 40.0% |
TGTTGCAGATGAGATTGACA+TGG | + | chr4_2:35393745-35393764 | Msa0598560:intron | 40.0% | |
GTTGCAGATGAGATTGACAT+GGG | + | chr4_2:35393746-35393765 | Msa0598560:intron | 40.0% | |
!! | ATGAGATTGACATGGGTTAG+TGG | + | chr4_2:35393753-35393772 | Msa0598560:CDS | 40.0% |
!! | TGAGATTGACATGGGTTAGT+GGG | + | chr4_2:35393754-35393773 | Msa0598560:CDS | 40.0% |
ATCATGCCATCCAAAATCCT+TGG | - | chr4_2:35393997-35394016 | None:intergenic | 40.0% | |
ATCCATTCAGCACTTATGAC+AGG | + | chr4_2:35394026-35394045 | Msa0598560:CDS | 40.0% | |
AGTGCTTACTCCTACAGATA+TGG | + | chr4_2:35394062-35394081 | Msa0598560:CDS | 40.0% | |
CTTACTCCTACAGATATGGA+AGG | + | chr4_2:35394066-35394085 | Msa0598560:CDS | 40.0% | |
TCTAAATTGCGGTCTCTAAC+TGG | - | chr4_2:35394166-35394185 | None:intergenic | 40.0% | |
! | AGACCGCAATTTAGAACCAT+GGG | + | chr4_2:35394171-35394190 | Msa0598560:intron | 40.0% |
CCAATGATGGTCTAGTAACT+CGG | + | chr4_2:35394305-35394324 | Msa0598560:intron | 40.0% | |
AGCTGGTGGAGTTGAAAATT+TGG | - | chr4_2:35394349-35394368 | None:intergenic | 40.0% | |
! | AAATTTTCAACTCCACCAGC+TGG | + | chr4_2:35394348-35394367 | Msa0598560:CDS | 40.0% |
! | GGTTTTTCCCATATCACCAA+AGG | - | chr4_2:35394400-35394419 | None:intergenic | 40.0% |
!! | TTCTTCTGAAGCATCAAGAG+GGG | - | chr4_2:35394421-35394440 | None:intergenic | 40.0% |
!! | GTTCTTCTGAAGCATCAAGA+GGG | - | chr4_2:35394422-35394441 | None:intergenic | 40.0% |
!! | TGTTCTTCTGAAGCATCAAG+AGG | - | chr4_2:35394423-35394442 | None:intergenic | 40.0% |
GGAGACATAAGTTATGCAAC+TGG | + | chr4_2:35394792-35394811 | Msa0598560:CDS | 40.0% | |
!!! | CAACTGGTTTTCTAGCAGAA+TGG | + | chr4_2:35394808-35394827 | Msa0598560:CDS | 40.0% |
GTTTATGTTACTCCTGACTC+TGG | + | chr4_2:35395036-35395055 | Msa0598560:CDS | 40.0% | |
! | CCTTGTTCAATAGAGTACCA+AGG | - | chr4_2:35395123-35395142 | None:intergenic | 40.0% |
CCTTGGTACTCTATTGAACA+AGG | + | chr4_2:35395120-35395139 | Msa0598560:CDS | 40.0% | |
! | ATTTTCGGACCAGTCATGTT+CGG | - | chr4_2:35395172-35395191 | None:intergenic | 40.0% |
!! | TACTCCTTGGCTGATTTTCA+TGG | + | chr4_2:35395338-35395357 | Msa0598560:CDS | 40.0% |
!! | ACTCCTTGGCTGATTTTCAT+GGG | + | chr4_2:35395339-35395358 | Msa0598560:CDS | 40.0% |
AACTAGACAACAAACTCGTG+AGG | + | chr4_2:35395409-35395428 | Msa0598560:intron | 40.0% | |
CTACCAAACCGCCAAAATAA+CGG | + | chr4_2:35395484-35395503 | Msa0598560:intron | 40.0% | |
!!! | ATTCCGTTATTTTGGCGGTT+TGG | - | chr4_2:35395490-35395509 | None:intergenic | 40.0% |
CCAATGTACACTTCCAACAA+CGG | + | chr4_2:35395635-35395654 | Msa0598560:CDS | 40.0% | |
! | GCCATTGCTGTTACAGAATA+AGG | + | chr4_2:35395697-35395716 | Msa0598560:CDS | 40.0% |
! | GCCTTATTCTGTAACAGCAA+TGG | - | chr4_2:35395701-35395720 | None:intergenic | 40.0% |
GAACATCACTCCTTAGAACT+CGG | + | chr4_2:35395723-35395742 | Msa0598560:intron | 40.0% | |
CTCTATGTAACCGAGTTCTA+AGG | - | chr4_2:35395736-35395755 | None:intergenic | 40.0% | |
! | GAACATGAAACAGGTTGACT+TGG | + | chr4_2:35395790-35395809 | Msa0598560:intron | 40.0% |
!!! | CAGGTTGACTTGGTTCTTTT+TGG | + | chr4_2:35395800-35395819 | Msa0598560:intron | 40.0% |
AAATTGTGGTTATAGCGCAG+TGG | + | chr4_2:35396039-35396058 | Msa0598560:intron | 40.0% | |
AGCGGCCGCAATATATATAA+AGG | - | chr4_2:35396339-35396358 | None:intergenic | 40.0% | |
GCGGTATGCATTTACAATAG+CGG | - | chr4_2:35396357-35396376 | None:intergenic | 40.0% | |
GATGTCACAAACTGCAATGA+AGG | - | chr4_2:35396713-35396732 | None:intergenic | 40.0% | |
TATTATACCCCTACCTACAG+TGG | + | chr4_2:35397049-35397068 | Msa0598560:three_prime_UTR | 40.0% | |
ATTATACCCCTACCTACAGT+GGG | + | chr4_2:35397050-35397069 | Msa0598560:three_prime_UTR | 40.0% | |
!!! | TGTGGCCTTGGTTTTGGTTT+TGG | - | chr4_2:35388899-35388918 | None:intergenic | 45.0% |
GTAAGGTCCAAAGTTGAGGA+AGG | - | chr4_2:35389093-35389112 | None:intergenic | 45.0% | |
AACCGTAAGGTCCAAAGTTG+AGG | - | chr4_2:35389097-35389116 | None:intergenic | 45.0% | |
GTTGGATGAGGAGTTTGTCA+CGG | + | chr4_2:35389248-35389267 | Msa0598560:CDS | 45.0% | |
GACATACCTTGACAGGGTAA+TGG | - | chr4_2:35389517-35389536 | None:intergenic | 45.0% | |
GTGCATGACATACCTTGACA+GGG | - | chr4_2:35389523-35389542 | None:intergenic | 45.0% | |
TGTGCATGACATACCTTGAC+AGG | - | chr4_2:35389524-35389543 | None:intergenic | 45.0% | |
AGTGTCACACCTACCTCAAA+TGG | + | chr4_2:35389958-35389977 | Msa0598560:intron | 45.0% | |
CACACCTACCTCAAATGGAA+TGG | + | chr4_2:35389963-35389982 | Msa0598560:intron | 45.0% | |
! | CAGACCATTCCATTTGAGGT+AGG | - | chr4_2:35389970-35389989 | None:intergenic | 45.0% |
CGTGGTCCAGTTTCATTGAA+CGG | + | chr4_2:35390617-35390636 | Msa0598560:intron | 45.0% | |
GGTTTGCACACCCTAAGATT+CGG | + | chr4_2:35390638-35390657 | Msa0598560:intron | 45.0% | |
!! | CAATGGATTGGTTCAGATGG+AGG | - | chr4_2:35390692-35390711 | None:intergenic | 45.0% |
CGTCGACATAAACAGCTCTA+TGG | - | chr4_2:35390959-35390978 | None:intergenic | 45.0% | |
TCCCTCAATATCCACACATC+TGG | + | chr4_2:35391029-35391048 | Msa0598560:intron | 45.0% | |
GTCCATGTTCCTACTATGAC+AGG | - | chr4_2:35391414-35391433 | None:intergenic | 45.0% | |
GTGCCGCAAAGAGATAAAAG+AGG | + | chr4_2:35391957-35391976 | Msa0598560:intron | 45.0% | |
GAGATAACTCTCATGTGTGG+TGG | - | chr4_2:35392070-35392089 | None:intergenic | 45.0% | |
AGGGAGATAACTCTCATGTG+TGG | - | chr4_2:35392073-35392092 | None:intergenic | 45.0% | |
TCGCCTAATAAACACTACCC+AGG | + | chr4_2:35392481-35392500 | Msa0598560:intron | 45.0% | |
! | GAAGCATCATCACTGCTTGT+AGG | - | chr4_2:35392535-35392554 | None:intergenic | 45.0% |
ACCAACAGAGCTATACTCAC+GGG | - | chr4_2:35392794-35392813 | None:intergenic | 45.0% | |
! | GTGAGTATAGCTCTGTTGGT+AGG | + | chr4_2:35392794-35392813 | Msa0598560:intron | 45.0% |
! | GTGAATAAGTGAGGTGTCCA+GGG | - | chr4_2:35392856-35392875 | None:intergenic | 45.0% |
TGCAGTGTGACAACTTGTAG+TGG | + | chr4_2:35393043-35393062 | Msa0598560:CDS | 45.0% | |
GAGTTTGTGTTCTTCACTGG+TGG | + | chr4_2:35393106-35393125 | Msa0598560:CDS | 45.0% | |
CCGTAATTCTCTGCAGTCTA+AGG | + | chr4_2:35393376-35393395 | Msa0598560:intron | 45.0% | |
!! | GGTTGTTTTGTCGGTATCTG+TGG | - | chr4_2:35393686-35393705 | None:intergenic | 45.0% |
!! | GAGATTGACATGGGTTAGTG+GGG | + | chr4_2:35393755-35393774 | Msa0598560:CDS | 45.0% |
! | GATTTTGGATGGCATGATCC+AGG | + | chr4_2:35393999-35394018 | Msa0598560:CDS | 45.0% |
! | AGTGCTGAATGGATGAATCC+TGG | - | chr4_2:35394020-35394039 | None:intergenic | 45.0% |
!! | GTCCTGTCATAAGTGCTGAA+TGG | - | chr4_2:35394031-35394050 | None:intergenic | 45.0% |
CTGTAGGAGTAAGCACTTGA+TGG | - | chr4_2:35394059-35394078 | None:intergenic | 45.0% | |
! | GAGACCGCAATTTAGAACCA+TGG | + | chr4_2:35394170-35394189 | Msa0598560:intron | 45.0% |
!! | CTGCCCATGGTTCTAAATTG+CGG | - | chr4_2:35394177-35394196 | None:intergenic | 45.0% |
CGCATTAAATAGTCTGCCCA+TGG | - | chr4_2:35394190-35394209 | None:intergenic | 45.0% | |
CCGAGTTACTAGACCATCAT+TGG | - | chr4_2:35394308-35394327 | None:intergenic | 45.0% | |
GTCGATGTCAGACACAATAC+TGG | - | chr4_2:35394611-35394630 | None:intergenic | 45.0% | |
! | TTGATAACCGATAGTGCTCC+AGG | - | chr4_2:35394720-35394739 | None:intergenic | 45.0% |
TATGTTACTCCTGACTCTGG+TGG | + | chr4_2:35395039-35395058 | Msa0598560:CDS | 45.0% | |
!! | CTCCTTGGCTGATTTTCATG+GGG | + | chr4_2:35395340-35395359 | Msa0598560:CDS | 45.0% |
TACCCCATGAAAATCAGCCA+AGG | - | chr4_2:35395345-35395364 | None:intergenic | 45.0% | |
CAACAAACTCGTGAGGTCTA+TGG | + | chr4_2:35395416-35395435 | Msa0598560:intron | 45.0% | |
CCACCTTTAATCGCTTGAAC+CGG | + | chr4_2:35395451-35395470 | Msa0598560:intron | 45.0% | |
GTTCCGGTTCAAGCGATTAA+AGG | - | chr4_2:35395457-35395476 | None:intergenic | 45.0% | |
! | GTTTGGTAGCCATTTGGTTC+CGG | - | chr4_2:35395473-35395492 | None:intergenic | 45.0% |
! | CCGTTGTTGGAAGTGTACAT+TGG | - | chr4_2:35395638-35395657 | None:intergenic | 45.0% |
ATGCCAATGACAGCATGTAC+AGG | - | chr4_2:35395938-35395957 | None:intergenic | 45.0% | |
TGTACATGCTGTCATTGGCA+TGG | + | chr4_2:35395937-35395956 | Msa0598560:CDS | 45.0% | |
TACTACCGACCTATGAAGCA+CGG | + | chr4_2:35396096-35396115 | Msa0598560:intron | 45.0% | |
TGTATCCGTGCTTCATAGGT+CGG | - | chr4_2:35396104-35396123 | None:intergenic | 45.0% | |
TGTCTGTATCCGTGCTTCAT+AGG | - | chr4_2:35396108-35396127 | None:intergenic | 45.0% | |
ATGAAGCACGGATACAGACA+TGG | + | chr4_2:35396108-35396127 | Msa0598560:intron | 45.0% | |
!! | ATTATTAGCGGTGTCGTGTC+TGG | - | chr4_2:35396137-35396156 | None:intergenic | 45.0% |
!! | TATATGTGTCGGTGTCGTGT+CGG | + | chr4_2:35396185-35396204 | Msa0598560:intron | 45.0% |
! | GAATGTTCTGTTGCATTGGC+AGG | + | chr4_2:35396495-35396514 | Msa0598560:intron | 45.0% |
ACTATTCCCACTGTAGGTAG+GGG | - | chr4_2:35397059-35397078 | None:intergenic | 45.0% | |
GACTATTCCCACTGTAGGTA+GGG | - | chr4_2:35397060-35397079 | None:intergenic | 45.0% | |
!! | AAAAATATGATAAAAAATTA+AGG | - | chr4_2:35391222-35391241 | None:intergenic | 5.0% |
TTTGTCACGGTTACCGTCAC+CGG | + | chr4_2:35389261-35389280 | Msa0598560:CDS | 50.0% | |
ATCTCTCGGTTTCGAAACGC+CGG | - | chr4_2:35389283-35389302 | None:intergenic | 50.0% | |
CGAAACCGAGAGATGGAGAT+TGG | + | chr4_2:35389289-35389308 | Msa0598560:CDS | 50.0% | |
ACCGAGAGATGGAGATTGGT+TGG | + | chr4_2:35389293-35389312 | Msa0598560:CDS | 50.0% | |
GCCAACCAATCTCCATCTCT+CGG | - | chr4_2:35389297-35389316 | None:intergenic | 50.0% | |
! | ACAGGGTAATGGCAAAGCAG+AGG | - | chr4_2:35389506-35389525 | None:intergenic | 50.0% |
GCTTTGCCATTACCCTGTCA+AGG | + | chr4_2:35389508-35389527 | Msa0598560:CDS | 50.0% | |
AGATGGAGGGCCGAATCTTA+GGG | - | chr4_2:35390651-35390670 | None:intergenic | 50.0% | |
GATGGAGGGTCGAAATGGAT+TGG | - | chr4_2:35390677-35390696 | None:intergenic | 50.0% | |
GTTCAGATGGAGGGTCGAAA+TGG | - | chr4_2:35390682-35390701 | None:intergenic | 50.0% | |
TATCAATGCAGTGGGGACTC+TGG | + | chr4_2:35391001-35391020 | Msa0598560:intron | 50.0% | |
CCAACAGAGCTATACTCACG+GGG | - | chr4_2:35392793-35392812 | None:intergenic | 50.0% | |
GCATTGTTATATGCTGGGGC+CGG | + | chr4_2:35392822-35392841 | Msa0598560:intron | 50.0% | |
CATTGTTATATGCTGGGGCC+GGG | + | chr4_2:35392823-35392842 | Msa0598560:intron | 50.0% | |
! | GGTGAATAAGTGAGGTGTCC+AGG | - | chr4_2:35392857-35392876 | None:intergenic | 50.0% |
AAGGAGTGGACCTTCCAACA+AGG | - | chr4_2:35393147-35393166 | None:intergenic | 50.0% | |
AAGGTTCGCGGTTGCAAACT+TGG | + | chr4_2:35393276-35393295 | Msa0598560:intron | 50.0% | |
AGGTTCGCGGTTGCAAACTT+GGG | + | chr4_2:35393277-35393296 | Msa0598560:intron | 50.0% | |
CTGTGACGCACTTGCAAATG+AGG | + | chr4_2:35393334-35393353 | Msa0598560:intron | 50.0% | |
CCAAAATCCTTGGCAGGACT+AGG | - | chr4_2:35393987-35394006 | None:intergenic | 50.0% | |
! | CCTAGTCCTGCCAAGGATTT+TGG | + | chr4_2:35393984-35394003 | Msa0598560:CDS | 50.0% |
! | GTCCTGCCAAGGATTTTGGA+TGG | + | chr4_2:35393988-35394007 | Msa0598560:CDS | 50.0% |
TGCCATCCAAAATCCTTGGC+AGG | - | chr4_2:35393993-35394012 | None:intergenic | 50.0% | |
GGTCTAGTAACTCGGCTGAT+TGG | + | chr4_2:35394313-35394332 | Msa0598560:intron | 50.0% | |
! | TTTTCAACTCCACCAGCTGG+AGG | + | chr4_2:35394351-35394370 | Msa0598560:CDS | 50.0% |
! | TGAACAGCCTGGAGCACTAT+CGG | + | chr4_2:35394710-35394729 | Msa0598560:intron | 50.0% |
CAGCAATCGGGAATCATGAG+AGG | + | chr4_2:35394883-35394902 | Msa0598560:CDS | 50.0% | |
TCCAATGCCAACTGCAGCAA+AGG | + | chr4_2:35395092-35395111 | Msa0598560:CDS | 50.0% | |
TCCTTTGCTGCAGTTGGCAT+TGG | - | chr4_2:35395096-35395115 | None:intergenic | 50.0% | |
GGCTTATCCTTTGCTGCAGT+TGG | - | chr4_2:35395102-35395121 | None:intergenic | 50.0% | |
CTGCAGCAAAGGATAAGCCT+TGG | + | chr4_2:35395103-35395122 | Msa0598560:CDS | 50.0% | |
CTGGTCCGAAAATTCTGAGC+AGG | + | chr4_2:35395179-35395198 | Msa0598560:CDS | 50.0% | |
CTCGTGAGGTCTATGGATCA+TGG | + | chr4_2:35395423-35395442 | Msa0598560:intron | 50.0% | |
CCGGTTCAAGCGATTAAAGG+TGG | - | chr4_2:35395454-35395473 | None:intergenic | 50.0% | |
TCGCTTGAACCGGAACCAAA+TGG | + | chr4_2:35395461-35395480 | Msa0598560:intron | 50.0% | |
!! | TTGGCGGTTTGGTAGCCATT+TGG | - | chr4_2:35395479-35395498 | None:intergenic | 50.0% |
GCTCCTGTACATGCTGTCAT+TGG | + | chr4_2:35395932-35395951 | Msa0598560:CDS | 50.0% | |
TATGAAGCACGGACACTCCT+CGG | - | chr4_2:35396262-35396281 | None:intergenic | 50.0% | |
TTGTCGGCAGCTATGAAGCA+CGG | - | chr4_2:35396273-35396292 | None:intergenic | 50.0% | |
CTGAGAGCTGGAGCCTAAAA+AGG | + | chr4_2:35396518-35396537 | Msa0598560:CDS | 50.0% | |
GGACTATTCCCACTGTAGGT+AGG | - | chr4_2:35397061-35397080 | None:intergenic | 50.0% | |
ACCTACAGTGGGAATAGTCC+TGG | + | chr4_2:35397061-35397080 | Msa0598560:three_prime_UTR | 50.0% | |
GACCATAGGTCCTTGTTGGA+CGG | - | chr4_2:35397087-35397106 | None:intergenic | 50.0% | |
GCTAGACCATAGGTCCTTGT+TGG | - | chr4_2:35397091-35397110 | None:intergenic | 50.0% | |
GGCGTTTCGAAACCGAGAGA+TGG | + | chr4_2:35389282-35389301 | Msa0598560:CDS | 55.0% | |
CTCGGGGAGGCTTCATTTAG+AGG | + | chr4_2:35390339-35390358 | Msa0598560:intron | 55.0% | |
CAGATGGAGGGCCGAATCTT+AGG | - | chr4_2:35390652-35390671 | None:intergenic | 55.0% | |
AATGCAGTGGGGACTCTGGA+TGG | + | chr4_2:35391005-35391024 | Msa0598560:intron | 55.0% | |
TGTGTGGTGGTCCAACCCTT+TGG | - | chr4_2:35392057-35392076 | None:intergenic | 55.0% | |
! | CCCCGTGAGTATAGCTCTGT+TGG | + | chr4_2:35392790-35392809 | Msa0598560:intron | 55.0% |
TTTCTCAGCCCCTGCCTTGT+TGG | + | chr4_2:35393130-35393149 | Msa0598560:CDS | 55.0% | |
TGGACCTTCCAACAAGGCAG+GGG | - | chr4_2:35393141-35393160 | None:intergenic | 55.0% | |
GTGGACCTTCCAACAAGGCA+GGG | - | chr4_2:35393142-35393161 | None:intergenic | 55.0% | |
AGTGGACCTTCCAACAAGGC+AGG | - | chr4_2:35393143-35393162 | None:intergenic | 55.0% | |
!! | GACATGGGTTAGTGGGGACA+AGG | + | chr4_2:35393761-35393780 | Msa0598560:CDS | 55.0% |
AGTTGTGCCTAGTCCTGCCA+AGG | + | chr4_2:35393977-35393996 | Msa0598560:CDS | 55.0% | |
TCATCTGATCCTCCAGCTGG+TGG | - | chr4_2:35394363-35394382 | None:intergenic | 55.0% | |
AGCTCATCTGATCCTCCAGC+TGG | - | chr4_2:35394366-35394385 | None:intergenic | 55.0% | |
CCACATTCACCACCAGAGTC+AGG | - | chr4_2:35395051-35395070 | None:intergenic | 55.0% | |
! | CCTGACTCTGGTGGTGAATG+TGG | + | chr4_2:35395048-35395067 | Msa0598560:CDS | 55.0% |
CATGCTGTCATTGGCATGGC+TGG | + | chr4_2:35395941-35395960 | Msa0598560:CDS | 55.0% | |
CGTCGGACATGACACATGTC+CGG | + | chr4_2:35396208-35396227 | Msa0598560:intron | 55.0% | |
! | GATTAGGCGTGTCTCGGTGT+CGG | - | chr4_2:35396240-35396259 | None:intergenic | 55.0% |
! | TCCTCGGATTAGGCGTGTCT+CGG | - | chr4_2:35396246-35396265 | None:intergenic | 55.0% |
GCCAGGACTATTCCCACTGT+AGG | - | chr4_2:35397065-35397084 | None:intergenic | 55.0% | |
ATAGTCCTGGCCGTCCAACA+AGG | + | chr4_2:35397074-35397093 | Msa0598560:three_prime_UTR | 55.0% | |
CGGTTTCGAAACGCCGGTGA+CGG | - | chr4_2:35389277-35389296 | None:intergenic | 60.0% | |
GGTGTCCAGGGTTCGAATCC+CGG | - | chr4_2:35392844-35392863 | None:intergenic | 60.0% | |
! | TCAGCCCCTGCCTTGTTGGA+AGG | + | chr4_2:35393134-35393153 | Msa0598560:CDS | 60.0% |
!! | GTCTCGGTGTCGGACATGAC+CGG | - | chr4_2:35396230-35396249 | None:intergenic | 60.0% |
ACCGAGACACGCCTAATCCG+AGG | + | chr4_2:35396242-35396261 | Msa0598560:intron | 60.0% | |
GCACGGACACTCCTCGGATT+AGG | - | chr4_2:35396256-35396275 | None:intergenic | 60.0% | |
! | TGCATTGGCAGGCTGAGAGC+TGG | + | chr4_2:35396506-35396525 | Msa0598560:intron | 60.0% |
TAGGTCCTTGTTGGACGGCC+AGG | - | chr4_2:35397082-35397101 | None:intergenic | 60.0% | |
GGCCGTCCAACAAGGACCTA+TGG | + | chr4_2:35397082-35397101 | Msa0598560:three_prime_UTR | 60.0% | |
!! | TGTCGGTGTCGTGTCGGCGT+CGG | + | chr4_2:35396191-35396210 | Msa0598560:intron | 65.0% |
TGGGGCCGGGATTCGAACCC+TGG | + | chr4_2:35392836-35392855 | Msa0598560:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 35388835 | 35397130 | 35388835 | ID=Msa0598560;Name=Msa0598560 |
chr4_2 | mRNA | 35388835 | 35397130 | 35388835 | ID=Msa0598560-mRNA-1;Parent=Msa0598560;Name=Msa0598560-mRNA-1;_AED=0.08;_eAED=0.08;_QI=171|1|1|1|1|1|13|355|634 |
chr4_2 | exon | 35388835 | 35389340 | 35388835 | ID=Msa0598560-mRNA-1:exon:8140;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35389442 | 35389529 | 35389442 | ID=Msa0598560-mRNA-1:exon:8141;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35392968 | 35393234 | 35392968 | ID=Msa0598560-mRNA-1:exon:8142;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35393753 | 35393861 | 35393753 | ID=Msa0598560-mRNA-1:exon:8143;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35393973 | 35394087 | 35393973 | ID=Msa0598560-mRNA-1:exon:8144;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35394320 | 35394452 | 35394320 | ID=Msa0598560-mRNA-1:exon:8145;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35394717 | 35394904 | 35394717 | ID=Msa0598560-mRNA-1:exon:8146;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35395014 | 35395200 | 35395014 | ID=Msa0598560-mRNA-1:exon:8147;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35395294 | 35395361 | 35395294 | ID=Msa0598560-mRNA-1:exon:8148;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35395628 | 35395718 | 35395628 | ID=Msa0598560-mRNA-1:exon:8149;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35395803 | 35395991 | 35395803 | ID=Msa0598560-mRNA-1:exon:8150;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35396517 | 35396597 | 35396517 | ID=Msa0598560-mRNA-1:exon:8151;Parent=Msa0598560-mRNA-1 |
chr4_2 | exon | 35396722 | 35397130 | 35396722 | ID=Msa0598560-mRNA-1:exon:8152;Parent=Msa0598560-mRNA-1 |
chr4_2 | five_prime_UTR | 35388835 | 35389005 | 35388835 | ID=Msa0598560-mRNA-1:five_prime_utr;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35389006 | 35389340 | 35389006 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35389442 | 35389529 | 35389442 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35392968 | 35393234 | 35392968 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35393753 | 35393861 | 35393753 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35393973 | 35394087 | 35393973 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35394320 | 35394452 | 35394320 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35394717 | 35394904 | 35394717 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35395014 | 35395200 | 35395014 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35395294 | 35395361 | 35395294 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35395628 | 35395718 | 35395628 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35395803 | 35395991 | 35395803 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35396517 | 35396597 | 35396517 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | CDS | 35396722 | 35396775 | 35396722 | ID=Msa0598560-mRNA-1:cds;Parent=Msa0598560-mRNA-1 |
chr4_2 | three_prime_UTR | 35396776 | 35397130 | 35396776 | ID=Msa0598560-mRNA-1:three_prime_utr;Parent=Msa0598560-mRNA-1 |
Gene Sequence |
Protein sequence |