AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1152430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152430 MtrunA17_Chr7g0242641 99.443 359 2 0 60 418 1 359 0.0 737
Msa1152430 MtrunA17_Chr4g0029681 29.545 308 211 3 101 403 107 413 7.42e-42 152
Msa1152430 MtrunA17_Chr7g0242631 94.030 67 4 0 1 67 1 67 3.97e-40 139
Msa1152430 MtrunA17_Chr4g0055941 25.217 345 197 12 116 403 98 438 2.82e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152430 AT3G51840.1 80.046 431 68 3 3 418 9 436 0.0 726
Msa1152430 AT3G45300.1 29.677 310 208 3 101 403 99 405 4.79e-41 150
Msa1152430 AT5G65110.2 25.291 344 195 11 106 390 136 476 5.20e-15 77.4
Msa1152430 AT5G65110.1 25.291 344 195 11 106 390 136 476 5.49e-15 77.4

Find 188 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTAAACAAAACTTTAA+AGG 0.148726 7_4:-38065306 None:intergenic
CAAGGAAATATTGGAGAATT+TGG 0.161480 7_4:-38065084 None:intergenic
CAGTACATTTGCTGATTTAT+TGG 0.162188 7_4:+38060507 Msa1152430:CDS
ACCTCAACAAATCAAATAAA+TGG 0.162779 7_4:+38060547 Msa1152430:CDS
CAGCTCAAGGTTAGGTCTTT+AGG 0.181912 7_4:-38064960 None:intergenic
CAAGTTTCTGTTGGTTGATT+TGG 0.189805 7_4:-38062374 None:intergenic
GCTTGGTGGCAATGGAATTT+TGG 0.204044 7_4:+38062864 Msa1152430:CDS
TGTCCTGGTCTTTCCGTTAC+TGG 0.204447 7_4:+38059910 Msa1152430:CDS
CAAATTGTTTCCTCTCCTTT+AGG 0.236337 7_4:-38062332 None:intergenic
TATATTGTGACAGATAAAAT+TGG 0.241875 7_4:+38057950 Msa1152430:intron
AATGTTTGAGATTTCTGCTT+TGG 0.286414 7_4:+38064329 Msa1152430:three_prime_UTR
AAATCATTTCTCTGGGTTGC+AGG 0.295185 7_4:-38065353 None:intergenic
TGTTTCCTATCCACCGCTTT+TGG 0.303153 7_4:-38060486 None:intergenic
AAGTTGTTCAACTTTCATTT+TGG 0.313392 7_4:+38059972 Msa1152430:CDS
ACCACCATGGTTCAGTTCAT+TGG 0.318254 7_4:-38065378 None:intergenic
GGCAAGAGAAACAGCTGCTT+TGG 0.325894 7_4:+38062831 Msa1152430:CDS
AAGTTCATTCAAGGAAATAT+TGG 0.332542 7_4:-38065093 None:intergenic
TATTCCAAAGCTTGGTGAAC+TGG 0.343760 7_4:+38059774 Msa1152430:CDS
GTCATCTATGTATTATTCTA+AGG 0.346366 7_4:+38065614 Msa1152430:three_prime_UTR
GCATTGATTAGTGTTCATTC+AGG 0.349526 7_4:-38064752 None:intergenic
CTCATCAAGGAAACATCATT+AGG 0.360122 7_4:+38064720 Msa1152430:three_prime_UTR
CCTTCAATTCTGTCCTCATC+AGG 0.370969 7_4:-38061343 None:intergenic
GGTTAAATAAAGTGGAAAAC+AGG 0.374018 7_4:-38064295 None:intergenic
GTGATTGATTCTCAGGGTTA+TGG 0.374156 7_4:+38059886 Msa1152430:intron
GTGTTTGAGTAGTTCATTCA+TGG 0.376190 7_4:-38065135 None:intergenic
GAGAGAACTCAATGATGAAT+TGG 0.379688 7_4:-38065222 None:intergenic
AGCTTTGGAATAGCATGAAA+TGG 0.380127 7_4:-38059763 None:intergenic
ATCCTAATAGCCTGCTCCTC+TGG 0.383045 7_4:-38059174 None:intergenic
TGATGGGAAGAAGAAGAAAA+TGG 0.383375 7_4:-38057637 None:intergenic
CTTGGTGAACTGGGTATTGC+TGG 0.383548 7_4:+38059784 Msa1152430:CDS
ATTCTACTTCTTTGAATAGC+TGG 0.387830 7_4:-38064055 None:intergenic
AACAGAGTACTCTGCCACTA+TGG 0.388099 7_4:-38065458 None:intergenic
CTGAGCTTCAGCTCAAGGTT+AGG 0.397341 7_4:-38064968 None:intergenic
AACCAGAGGAGCAGGCTATT+AGG 0.397577 7_4:+38059172 Msa1152430:CDS
GCAAGAGAAACAGCTGCTTT+GGG 0.399586 7_4:+38062832 Msa1152430:CDS
GGCTAAGGTACATGAGAGTA+TGG 0.400367 7_4:-38065201 None:intergenic
CTAAAGGAGAGGAAACAATT+TGG 0.400638 7_4:+38062333 Msa1152430:CDS
GGGCTTAGAATCGTACAAAA+TGG 0.402602 7_4:+38061292 Msa1152430:CDS
TCTCAGGGTTATGGTTGTCC+TGG 0.404078 7_4:+38059895 Msa1152430:intron
GTCACAGGAAGAGAAGTTAC+TGG 0.408134 7_4:+38064016 Msa1152430:CDS
AATATTTCCTTGAATGAACT+TGG 0.415259 7_4:+38065095 Msa1152430:three_prime_UTR
AAGAGTTGGCTGATTCTGAT+AGG 0.422384 7_4:-38065493 None:intergenic
CTTCTAACTTTGTCAAGAAC+TGG 0.423293 7_4:+38065170 Msa1152430:three_prime_UTR
GCCTTGACTGAACCTGACTA+TGG 0.430881 7_4:+38060275 Msa1152430:CDS
CGATTGGGTTGGTTTGTGTT+GGG 0.433509 7_4:-38057677 None:intergenic
GCAACCTATTGGTATATCAA+TGG 0.437177 7_4:+38062030 Msa1152430:CDS
TCAGTCATGGATTACCTTGA+GGG 0.437471 7_4:+38062810 Msa1152430:intron
CATGCAATGCATCCTTCATC+TGG 0.438898 7_4:-38064686 None:intergenic
ATACCCAGTTCACCAAGCTT+TGG 0.439876 7_4:-38059778 None:intergenic
GCGATTGGGTTGGTTTGTGT+TGG 0.441265 7_4:-38057678 None:intergenic
AGTGAAGAGGTTAAATAAAG+TGG 0.446034 7_4:-38064303 None:intergenic
GAAGGTGGTTGGATCCTTGA+GGG 0.453581 7_4:+38060463 Msa1152430:CDS
ATGCCCATTGATATACCAAT+AGG 0.454299 7_4:-38062034 None:intergenic
CAAGGGTGAATGATGAATCA+TGG 0.458637 7_4:-38064909 None:intergenic
AATAGCATGAAATGGGAATT+CGG 0.463204 7_4:-38059755 None:intergenic
CAACCTATTGGTATATCAAT+GGG 0.463504 7_4:+38062031 Msa1152430:CDS
TTTGAAGACCACAGCAACTA+AGG 0.463606 7_4:+38060313 Msa1152430:CDS
TGACAAATGCTGATGCTTTG+AGG 0.465260 7_4:-38065061 None:intergenic
TTGATTTGGAAAGCTGCTAA+TGG 0.465853 7_4:-38062360 None:intergenic
GTTCAAGCGATGATTCTTGT+TGG 0.466273 7_4:+38062414 Msa1152430:CDS
TCATCAAGGAAACATCATTA+GGG 0.466898 7_4:+38064721 Msa1152430:three_prime_UTR
CCCATTTATTTGATTTGTTG+AGG 0.467948 7_4:-38060548 None:intergenic
TTTCATGCTATTCCAAAGCT+TGG 0.468013 7_4:+38059766 Msa1152430:CDS
CCTGATGAGGACAGAATTGA+AGG 0.469041 7_4:+38061343 Msa1152430:CDS
GGAAGGTAAATTGAAGCGAT+TGG 0.470473 7_4:-38057693 None:intergenic
TACAGTTCCAAGTTCATTCA+AGG 0.471092 7_4:-38065102 None:intergenic
ATGGTTGCTTGGCAACCTAT+TGG 0.472285 7_4:+38062019 Msa1152430:CDS
ACCCCGGGTCATGCTAGCTT+GGG 0.475227 7_4:+38062474 Msa1152430:CDS
CGAGAATTGCTTGGTGGCAA+TGG 0.475251 7_4:+38062856 Msa1152430:CDS
CTTGCATCACTTCCATAGTC+AGG 0.476058 7_4:-38060287 None:intergenic
TCCTTGGCAATGCTCACTAT+AGG 0.476560 7_4:+38060003 Msa1152430:CDS
AAGCGATGATTCTTGTTGGT+TGG 0.476633 7_4:+38062418 Msa1152430:CDS
CTTCATAGTATTGTCCATAG+TGG 0.477311 7_4:+38065444 Msa1152430:three_prime_UTR
CCTCAACAAATCAAATAAAT+GGG 0.478793 7_4:+38060548 Msa1152430:CDS
TTTGAGTATTGTAATACATA+GGG 0.481700 7_4:-38064792 None:intergenic
TGTTGCTGAGCTTCAGCTCA+AGG 0.485401 7_4:-38064973 None:intergenic
TTGAATAGCTGGCTTAAAGC+TGG 0.486843 7_4:-38064044 None:intergenic
GAAGGTAAATTGAAGCGATT+GGG 0.487886 7_4:-38057692 None:intergenic
TGGGTTGCAGGGTTTAAACC+AGG 0.490000 7_4:-38065341 None:intergenic
TTGATGAATTTCTCCAAGGA+TGG 0.491291 7_4:-38065571 None:intergenic
TCATTGCATTCACCAACAAA+AGG 0.491324 7_4:-38064253 None:intergenic
TTTCGCGTGTGATGGTTGCT+TGG 0.491652 7_4:+38062008 Msa1152430:CDS
TTTCCTTGATGAGCAAGATC+AGG 0.491750 7_4:-38064710 None:intergenic
AGCTGTTTCTCTTGCCCTCA+AGG 0.492161 7_4:-38062824 None:intergenic
GAGAGAGATACCTTGTGGAT+TGG 0.493364 7_4:-38057751 None:intergenic
CACGTATGAAATCAATACTT+TGG 0.493804 7_4:+38063994 Msa1152430:CDS
GTTTGAGTATTGTAATACAT+AGG 0.493888 7_4:-38064793 None:intergenic
GTGCCTTCGTAGGTGTAGAT+AGG 0.493896 7_4:-38063974 None:intergenic
CAGACACTATTGTATTCCAT+TGG 0.495422 7_4:+38064103 Msa1152430:three_prime_UTR
ATTGCAAATGTCCAAGTGCA+TGG 0.496474 7_4:+38064438 Msa1152430:three_prime_UTR
TGAGCATTGCCAAGGATGAA+TGG 0.497287 7_4:-38059996 None:intergenic
TGGCCTGATCTTGCTCATCA+AGG 0.501785 7_4:+38064707 Msa1152430:three_prime_UTR
CTTGTTGAAACCAGAGGAGC+AGG 0.506951 7_4:+38059164 Msa1152430:CDS
GCTTTGGAATAGCATGAAAT+GGG 0.508951 7_4:-38059762 None:intergenic
CTTGACAAAGTTAGAAGCCA+TGG 0.510762 7_4:-38065164 None:intergenic
AAATCAGAGGCAGCTGTATG+AGG 0.511145 7_4:+38064613 Msa1152430:three_prime_UTR
TTTGACGAATCATCCATCCT+TGG 0.512769 7_4:+38065558 Msa1152430:three_prime_UTR
GGAAGGTGGTTGGATCCTTG+AGG 0.517870 7_4:+38060462 Msa1152430:CDS
AATCATTTCTCTGGGTTGCA+GGG 0.520150 7_4:-38065352 None:intergenic
CAAGGAGGAAAAGTAGAGGC+TGG 0.520894 7_4:-38058037 None:intergenic
TAAATCAGGTGGAAGGTGGT+TGG 0.522142 7_4:+38060452 Msa1152430:intron
GAAATCAATACTTTGGTCAC+AGG 0.526713 7_4:+38064001 Msa1152430:CDS
GCTTTGGGGCGAGAATTGCT+TGG 0.528021 7_4:+38062847 Msa1152430:CDS
AAGTGTGAAAATGTTGATGA+TGG 0.528364 7_4:-38057654 None:intergenic
CTATGCAAGTTGTATGAAAG+TGG 0.528544 7_4:+38062444 Msa1152430:CDS
ACTTGCTGTTTCGCGTGTGA+TGG 0.529840 7_4:+38062000 Msa1152430:CDS
TATGAGTACAGATCCTGGTC+TGG 0.534415 7_4:+38064636 Msa1152430:three_prime_UTR
TTTCCCAAGCTAGCATGACC+CGG 0.534822 7_4:-38062477 None:intergenic
AAGGGTGAATGATGAATCAT+GGG 0.537443 7_4:-38064908 None:intergenic
TGCTTTGTAAATCAGGTGGA+AGG 0.538043 7_4:+38060445 Msa1152430:intron
GATTTCATACGTGCCTTCGT+AGG 0.539507 7_4:-38063984 None:intergenic
CAAACAAGAAACTAAGATGA+AGG 0.539935 7_4:-38065246 None:intergenic
ATTCCAAAGCTTGGTGAACT+GGG 0.540117 7_4:+38059775 Msa1152430:CDS
GGTGGCAAATCAAAATATGA+AGG 0.541043 7_4:-38057980 None:intergenic
ATATAGTAGCTTCCAGATGA+AGG 0.544143 7_4:+38064674 Msa1152430:three_prime_UTR
TACTCAAACACACTCTTCCA+TGG 0.545060 7_4:+38065147 Msa1152430:three_prime_UTR
GAGGGCCAAAAGCGGTGGAT+AGG 0.551086 7_4:+38060481 Msa1152430:CDS
GCAGATATTGAAACCAGCTC+AGG 0.552851 7_4:-38065015 None:intergenic
TATTGCTGGTGGTACAATCA+AGG 0.554972 7_4:+38059798 Msa1152430:CDS
CTCAAACATTGAAAGTGAAG+AGG 0.559667 7_4:-38064316 None:intergenic
TAAATTTATGATTTATGATG+TGG 0.560054 7_4:+38057584 None:intergenic
TTCAGTCATGGATTACCTTG+AGG 0.562403 7_4:+38062809 Msa1152430:intron
TGTGATTTAAAGGTACCTAA+AGG 0.564117 7_4:+38062317 Msa1152430:intron
ATTTATTGGTTATCTTCGCA+AGG 0.564288 7_4:+38060521 Msa1152430:CDS
TGAGGTATGAGTACAGATCC+TGG 0.566255 7_4:+38064631 Msa1152430:three_prime_UTR
GATGCTCAAAGGGAAAATCA+AGG 0.566883 7_4:-38064927 None:intergenic
TTGCAAATGTCCAAGTGCAT+GGG 0.567293 7_4:+38064439 Msa1152430:three_prime_UTR
TCAACAACAGCAACAAGAGT+TGG 0.573266 7_4:-38065507 None:intergenic
AAAATGGAGACATTGTTATG+AGG 0.575180 7_4:+38061308 Msa1152430:CDS
TTCCCAAGCTAGCATGACCC+GGG 0.576198 7_4:-38062476 None:intergenic
TTGGGGCGAGAATTGCTTGG+TGG 0.577790 7_4:+38062850 Msa1152430:CDS
GCATCTATGATATGTGTCAC+AGG 0.578609 7_4:+38062053 Msa1152430:CDS
ACTCAATGATGAATTGGCTA+AGG 0.580765 7_4:-38065216 None:intergenic
GTAGAGGCTGGAGTTGCTTG+TGG 0.581144 7_4:-38058025 None:intergenic
TGTCAGATGATCAGAGGCAG+AGG 0.581262 7_4:-38065280 None:intergenic
GTAAATTGAAGCGATTGGGT+TGG 0.582088 7_4:-38057688 None:intergenic
AGCGATAGCACTTCCAGTAA+CGG 0.583363 7_4:-38059923 None:intergenic
CAAAGAGTGACAGCCAGACC+AGG 0.586951 7_4:-38064649 None:intergenic
GCATTTGAACAAGTTTCTGT+TGG 0.588644 7_4:-38062383 None:intergenic
ACCTATAGTGAGCATTGCCA+AGG 0.591220 7_4:-38060004 None:intergenic
ATAATAAGTAATTAAATCAG+AGG 0.592238 7_4:+38064600 Msa1152430:three_prime_UTR
CAAGAGAAACAGCTGCTTTG+GGG 0.597481 7_4:+38062833 Msa1152430:CDS
CTTCACACAGAGTGGGCAAG+AGG 0.600708 7_4:-38064363 None:intergenic
GTTCATTCTTCACACAGAGT+GGG 0.603088 7_4:-38064370 None:intergenic
CAGATGAAGGATGCATTGCA+TGG 0.604300 7_4:+38064687 Msa1152430:three_prime_UTR
TAGTTCATTCATGGCAGAAG+AGG 0.605009 7_4:-38065126 None:intergenic
TCCTTGAGGGCCAAAAGCGG+TGG 0.605182 7_4:+38060476 Msa1152430:CDS
CTTCAATTCTGTCCTCATCA+GGG 0.605614 7_4:-38061342 None:intergenic
CGATGACTTGTTGAAACCAG+AGG 0.606119 7_4:+38059158 Msa1152430:CDS
GGTTCATTCTTCACACAGAG+TGG 0.606637 7_4:-38064371 None:intergenic
GAAAGTGGTAAAATGACCCC+GGG 0.606752 7_4:+38062459 Msa1152430:CDS
CCACCAAGTATAGCATTGTG+TGG 0.607707 7_4:+38060103 Msa1152430:intron
TGAAAGTGGTAAAATGACCC+CGG 0.608059 7_4:+38062458 Msa1152430:CDS
GGGTCATGCTAGCTTGGGAA+AGG 0.608692 7_4:+38062479 Msa1152430:CDS
ACAAGATGAAGTGTTAACCC+TGG 0.609266 7_4:+38065323 Msa1152430:three_prime_UTR
GCATTTGATGAATTTCTCCA+AGG 0.609829 7_4:-38065575 None:intergenic
AGGATTTGTCAGATGATCAG+AGG 0.610673 7_4:-38065286 None:intergenic
TCCATAGTCAGGTTCAGTCA+AGG 0.611700 7_4:-38060276 None:intergenic
TAACTTAGATGCATCAGATG+TGG 0.612435 7_4:-38064491 None:intergenic
ATGCTCAAAGGGAAAATCAA+GGG 0.618248 7_4:-38064926 None:intergenic
TTGTGGATTGGAACGAGTCA+TGG 0.618797 7_4:-38057739 None:intergenic
GGGTTGCAGGGTTTAAACCA+GGG 0.620087 7_4:-38065340 None:intergenic
CTAACTTTGTCAAGAACTGG+TGG 0.620925 7_4:+38065173 Msa1152430:three_prime_UTR
AGTTCATTCATGGCAGAAGA+GGG 0.624799 7_4:-38065125 None:intergenic
AGTGTGAAAATGTTGATGAT+GGG 0.625650 7_4:-38057653 None:intergenic
ACACTGAACCTTAGTTGCTG+TGG 0.626861 7_4:-38060321 None:intergenic
GCAAAAGTATCTACCGTCGT+TGG 0.632007 7_4:+38060141 Msa1152430:CDS
TTTATACTTTCCTCAACACA+AGG 0.634075 7_4:-38064392 None:intergenic
GAATACAATAGTGTCTGTTG+AGG 0.636079 7_4:-38064097 None:intergenic
GGTGAACTGGGTATTGCTGG+TGG 0.643007 7_4:+38059787 Msa1152430:CDS
ATTGGAACGAGTCATGGTGG+TGG 0.649515 7_4:-38057733 None:intergenic
TTTAAAGGTACCTAAAGGAG+AGG 0.649674 7_4:+38062322 Msa1152430:intron
CTTCCAGTAACGGAAAGACC+AGG 0.653841 7_4:-38059913 None:intergenic
GCAAGAGAAACATCAAGTGG+TGG 0.653933 7_4:-38057998 None:intergenic
CACCAAGTATAGCATTGTGT+GGG 0.656597 7_4:+38060104 Msa1152430:intron
TTTGTAAATCAGGTGGAAGG+TGG 0.660962 7_4:+38060448 Msa1152430:intron
GGATCCTTGAGGGCCAAAAG+CGG 0.668490 7_4:+38060473 Msa1152430:CDS
GAACCTATCTACACCTACGA+AGG 0.674168 7_4:+38063971 Msa1152430:CDS
AAACATGTCTTAATATCACA+AGG 0.677362 7_4:+38064526 Msa1152430:three_prime_UTR
TCCCAAGCTAGCATGACCCG+GGG 0.686858 7_4:-38062475 None:intergenic
ACCACAAGGAGGAAAAGTAG+AGG 0.690024 7_4:-38058041 None:intergenic
ATTAGGTTGTTACCACAAGG+AGG 0.698931 7_4:-38058052 None:intergenic
AATGCAAGAGAAACATCAAG+TGG 0.699349 7_4:-38058001 None:intergenic
GAAGAATGAACCTTGTGTTG+AGG 0.700306 7_4:+38064382 Msa1152430:three_prime_UTR
ATGACTCGTTCCAATCCACA+AGG 0.715801 7_4:+38057741 Msa1152430:CDS
TCCAATGAACTGAACCATGG+TGG 0.722158 7_4:+38065377 Msa1152430:three_prime_UTR
TGGATTGGAACGAGTCATGG+TGG 0.726458 7_4:-38057736 None:intergenic
TAAGGTACATGAGAGTATGG+CGG 0.739421 7_4:-38065198 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGTATAAGTTTTATTTT+TGG + chr7_4:38058507-38058526 Msa1152430:intron 10.0%
!! AACAAAATAAACATTAAATA+AGG - chr7_4:38062926-38062945 None:intergenic 10.0%
!! AATCAAAGATATAAAATATC+AGG - chr7_4:38060081-38060100 None:intergenic 15.0%
!! TGTACTAATAATGAATAAAA+TGG + chr7_4:38060937-38060956 Msa1152430:intron 15.0%
!! ACAAAAATAGAGAATAAAAT+TGG + chr7_4:38061271-38061290 Msa1152430:CDS 15.0%
!! CAAAAATAGAGAATAAAATT+GGG + chr7_4:38061272-38061291 Msa1152430:CDS 15.0%
!! TAAACATTAAATAAGGAATT+AGG - chr7_4:38062919-38062938 None:intergenic 15.0%
!!! ATTTTAATAAATTCCATTCT+TGG - chr7_4:38063062-38063081 None:intergenic 15.0%
!!! ATTATTTGAAATTAAGTGAA+AGG - chr7_4:38063335-38063354 None:intergenic 15.0%
!! TTTCACTTAATTTCAAATAA+TGG + chr7_4:38063334-38063353 Msa1152430:intron 15.0%
!!! TTTTAATTTTTGTGTCATTT+TGG - chr7_4:38063553-38063572 None:intergenic 15.0%
!! AATTAAAATAAAGAACCAAA+TGG + chr7_4:38063565-38063584 Msa1152430:intron 15.0%
!! CATAATAAATTACAAAATTG+TGG - chr7_4:38063658-38063677 None:intergenic 15.0%
!! TTGTAATTTATTATGTTTGT+TGG + chr7_4:38063663-38063682 Msa1152430:intron 15.0%
!!! TGAAAATGTATTTTTTTGTA+AGG + chr7_4:38064466-38064485 Msa1152430:three_prime_UTR 15.0%
!! ATAATAAGTAATTAAATCAG+AGG + chr7_4:38064600-38064619 Msa1152430:three_prime_UTR 15.0%
!! AAAAAAAAACAAAAGATCAC+AGG - chr7_4:38057870-38057889 None:intergenic 20.0%
!! TATACAATCAAACAAAACTT+TGG - chr7_4:38057934-38057953 None:intergenic 20.0%
!! TATATTGTGACAGATAAAAT+TGG + chr7_4:38057950-38057969 Msa1152430:intron 20.0%
!! AAATATGTAAGTATGTGATT+AGG - chr7_4:38058072-38058091 None:intergenic 20.0%
!! AAATATGAAATGACATAAAC+AGG - chr7_4:38058329-38058348 None:intergenic 20.0%
!! TTTCAAAAAGCAAAAAGAAA+AGG - chr7_4:38059256-38059275 None:intergenic 20.0%
!! TTCAATGTAAATATCTTTGT+TGG + chr7_4:38059279-38059298 Msa1152430:intron 20.0%
!!! AATTTTATATTTACTCATGG+AGG - chr7_4:38059306-38059325 None:intergenic 20.0%
!!! CCAAATTTTATATTTACTCA+TGG - chr7_4:38059309-38059328 None:intergenic 20.0%
!! CCATGAGTAAATATAAAATT+TGG + chr7_4:38059306-38059325 Msa1152430:intron 20.0%
!!! ATTGTATAGACATAAGTTTT+TGG + chr7_4:38059438-38059457 Msa1152430:intron 20.0%
!!! TTGTATAGACATAAGTTTTT+GGG + chr7_4:38059439-38059458 Msa1152430:intron 20.0%
!! TCAATTTGATTACATCAAAT+TGG - chr7_4:38059542-38059561 None:intergenic 20.0%
!! ATGTAATCAAATTGAAATGA+TGG + chr7_4:38059547-38059566 Msa1152430:intron 20.0%
!! TGTAATCAAATTGAAATGAT+GGG + chr7_4:38059548-38059567 Msa1152430:intron 20.0%
!! GTTTCTAATCTATTCATTAT+TGG + chr7_4:38059573-38059592 Msa1152430:intron 20.0%
!! CTAATTAGGACAAAATATAA+GGG - chr7_4:38059835-38059854 None:intergenic 20.0%
!! ATAAGTCAAAAAGAATTGAA+TGG - chr7_4:38060357-38060376 None:intergenic 20.0%
!!! CTCATTCTATATTTTTTTCT+GGG - chr7_4:38060716-38060735 None:intergenic 20.0%
!!! ACTCATTCTATATTTTTTTC+TGG - chr7_4:38060717-38060736 None:intergenic 20.0%
!! TCATATTAAAGAATATAGCT+TGG + chr7_4:38060852-38060871 Msa1152430:intron 20.0%
!! CATATTAAAGAATATAGCTT+GGG + chr7_4:38060853-38060872 Msa1152430:intron 20.0%
!! AAGGAAATATAGTATTCTAA+GGG - chr7_4:38061107-38061126 None:intergenic 20.0%
!! TTTCAGATATATCGTAAAAA+AGG + chr7_4:38061228-38061247 Msa1152430:intron 20.0%
!!! TTTACCTATTTTTCCTTTAT+GGG + chr7_4:38061736-38061755 Msa1152430:intron 20.0%
!!! ATATGTTGCTTATTTGTTTT+TGG + chr7_4:38061962-38061981 Msa1152430:intron 20.0%
!!! TAATGTTTTAAAAACCAAAC+TGG + chr7_4:38062092-38062111 Msa1152430:intron 20.0%
!! AACAGTTGTCATTAAATAAA+AGG + chr7_4:38062239-38062258 Msa1152430:intron 20.0%
!! TAAATATTGTTGTCAAATAG+AGG + chr7_4:38062512-38062531 Msa1152430:intron 20.0%
!!! TACAAAGTGTTATTAAACTA+CGG + chr7_4:38062597-38062616 Msa1152430:intron 20.0%
!!! TTGTCATATCTTATTTTGTA+AGG - chr7_4:38062691-38062710 None:intergenic 20.0%
!!! AACCTAGTTTTAAAAATTCT+AGG + chr7_4:38062709-38062728 Msa1152430:intron 20.0%
!!! AACCTAGAATTTTTAAAACT+AGG - chr7_4:38062714-38062733 None:intergenic 20.0%
!! AATTTCACTTAATTCAACTA+TGG + chr7_4:38062755-38062774 Msa1152430:intron 20.0%
!!! TTTCAATATTTTTTCAGTCA+TGG + chr7_4:38062797-38062816 Msa1152430:intron 20.0%
!! AACTGATCTATAGATTAAAT+TGG + chr7_4:38062954-38062973 Msa1152430:intron 20.0%
!! ATGGAATTTATTAAAATGAG+TGG + chr7_4:38063065-38063084 Msa1152430:intron 20.0%
!! AATTTATTAAAATGAGTGGA+TGG + chr7_4:38063069-38063088 Msa1152430:intron 20.0%
!! AGTTATGATAACAATAAATG+AGG + chr7_4:38063143-38063162 Msa1152430:intron 20.0%
!!! ATAAATGAGGTTTTTAGATA+AGG + chr7_4:38063156-38063175 Msa1152430:intron 20.0%
!! GACATTAAAAAAGATACTAA+AGG - chr7_4:38063366-38063385 None:intergenic 20.0%
!! CTTGAAATTTCATATGTAAA+TGG + chr7_4:38063526-38063545 Msa1152430:intron 20.0%
!! GACATATTGATATTTGATAT+TGG - chr7_4:38063774-38063793 None:intergenic 20.0%
!! CAAAAATGAAATACAAATTG+TGG - chr7_4:38063853-38063872 None:intergenic 20.0%
!!! TATTTCATTTTTGTTCACAT+TGG + chr7_4:38063860-38063879 Msa1152430:intron 20.0%
!!! ATTTCATTTTTGTTCACATT+GGG + chr7_4:38063861-38063880 Msa1152430:intron 20.0%
!! ATTACAAAAATATGAACCAA+TGG - chr7_4:38064122-38064141 None:intergenic 20.0%
!! AGGAAAAAAAAATTCTACTA+AGG + chr7_4:38064546-38064565 Msa1152430:three_prime_UTR 20.0%
!!! TTTGAGTATTGTAATACATA+GGG - chr7_4:38064795-38064814 None:intergenic 20.0%
!! AAAAAATGAAGGAAAGAAAA+AGG + chr7_4:38064844-38064863 Msa1152430:three_prime_UTR 20.0%
!! AAAAATGAAGGAAAGAAAAA+GGG + chr7_4:38064845-38064864 Msa1152430:three_prime_UTR 20.0%
!! TCTTGTAAACAAAACTTTAA+AGG - chr7_4:38065309-38065328 None:intergenic 20.0%
!!! AAAGAAGAAGAATATTTTGA+TGG + chr7_4:38065405-38065424 Msa1152430:three_prime_UTR 20.0%
!!! AAGAAGAAGAATATTTTGAT+GGG + chr7_4:38065406-38065425 Msa1152430:three_prime_UTR 20.0%
! GATATATAGATTGAGAATTG+AGG + chr7_4:38058118-38058137 Msa1152430:intron 25.0%
! TAATAGGCTGGAAATTAAAT+TGG - chr7_4:38058163-38058182 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+TGG - chr7_4:38058218-38058237 None:intergenic 25.0%
! TGTTTACAGCAAAAAGATTT+AGG + chr7_4:38058242-38058261 Msa1152430:intron 25.0%
!! TTTGCTATAAATGCTTAGTT+AGG - chr7_4:38058466-38058485 None:intergenic 25.0%
! TAGAATATCAACCAACTATT+GGG - chr7_4:38058896-38058915 None:intergenic 25.0%
! TTAGAATATCAACCAACTAT+TGG - chr7_4:38058897-38058916 None:intergenic 25.0%
!! TGCTTAAGTTTACATGATTT+TGG + chr7_4:38059034-38059053 Msa1152430:intron 25.0%
! TTTGTATTTGTGATGATTGT+TGG + chr7_4:38059107-38059126 Msa1152430:intron 25.0%
! GGTTTCAAAAAATATCTGTT+TGG + chr7_4:38059353-38059372 Msa1152430:intron 25.0%
! TCTGTTTGGACATATTTATT+TGG + chr7_4:38059367-38059386 Msa1152430:intron 25.0%
! AAACTTATGTCTATACAATC+TGG - chr7_4:38059437-38059456 None:intergenic 25.0%
! ACATGTATAGATATACAATC+AGG - chr7_4:38059498-38059517 None:intergenic 25.0%
! GTAATCAAATTGAAATGATG+GGG + chr7_4:38059549-38059568 Msa1152430:intron 25.0%
! TAATCAAATTGAAATGATGG+GGG + chr7_4:38059550-38059569 Msa1152430:intron 25.0%
! TCTAATCTATTCATTATTGG+AGG + chr7_4:38059576-38059595 Msa1152430:intron 25.0%
!! TTTTGATGTTTGCATCTTTT+TGG + chr7_4:38059624-38059643 Msa1152430:intron 25.0%
!!! TCATGCTTTTTAACAGTATT+GGG + chr7_4:38059726-38059745 Msa1152430:intron 25.0%
! CCTAATTAGGACAAAATATA+AGG - chr7_4:38059836-38059855 None:intergenic 25.0%
!! CCTTATATTTTGTCCTAATT+AGG + chr7_4:38059833-38059852 Msa1152430:intron 25.0%
!! AAGTTGTTCAACTTTCATTT+TGG + chr7_4:38059972-38059991 Msa1152430:CDS 25.0%
! ATCAGGAACATGAAAATTAT+TGG - chr7_4:38060064-38060083 None:intergenic 25.0%
!! TTTTCTTTGCTTTGTAAATC+AGG + chr7_4:38060438-38060457 Msa1152430:intron 25.0%
! ACCTCAACAAATCAAATAAA+TGG + chr7_4:38060547-38060566 Msa1152430:CDS 25.0%
! CCTCAACAAATCAAATAAAT+GGG + chr7_4:38060548-38060567 Msa1152430:CDS 25.0%
! TATAAGGATTTAACAATGAC+AGG - chr7_4:38060594-38060613 None:intergenic 25.0%
! ATCCTTATATATAAACATGC+CGG + chr7_4:38060605-38060624 Msa1152430:intron 25.0%
!!! TGGGTTTTTTACCAAATTTA+TGG + chr7_4:38060769-38060788 Msa1152430:intron 25.0%
!! AACAAATCACGAAACATTTT+AGG + chr7_4:38060878-38060897 Msa1152430:intron 25.0%
! TTCATCATTTCATGTTAGAA+TGG + chr7_4:38060980-38060999 Msa1152430:intron 25.0%
! CAAGGAAATATAGTATTCTA+AGG - chr7_4:38061108-38061127 None:intergenic 25.0%
! AAATGTAACATGAATTAGAG+TGG - chr7_4:38061713-38061732 None:intergenic 25.0%
!!! GTTTACCTATTTTTCCTTTA+TGG + chr7_4:38061735-38061754 Msa1152430:intron 25.0%
! CAAATAAAATGTTCCCATAA+AGG - chr7_4:38061752-38061771 None:intergenic 25.0%
! AGAGAGAAGGAAAAAATATT+AGG - chr7_4:38061811-38061830 None:intergenic 25.0%
!!! TGTTTTTGGTATCTCTAAAT+AGG + chr7_4:38061976-38061995 Msa1152430:intron 25.0%
!!! TATCTTATTTTGTAAGGACA+GGG - chr7_4:38062685-38062704 None:intergenic 25.0%
!!! ATATCTTATTTTGTAAGGAC+AGG - chr7_4:38062686-38062705 None:intergenic 25.0%
!!! TTTTTGTTGGTGTTTTTTGT+TGG - chr7_4:38063029-38063048 None:intergenic 25.0%
!! CTATATTTGTCTAGAACAAA+GGG - chr7_4:38063111-38063130 None:intergenic 25.0%
!! TCTATATTTGTCTAGAACAA+AGG - chr7_4:38063112-38063131 None:intergenic 25.0%
! AAAATCATTACGACACAATT+GGG - chr7_4:38063195-38063214 None:intergenic 25.0%
! AAAAATCATTACGACACAAT+TGG - chr7_4:38063196-38063215 None:intergenic 25.0%
! ATTATATCGCAAAATTACAC+TGG + chr7_4:38063308-38063327 Msa1152430:intron 25.0%
!! GTTTTCATAATCTGAGTTTT+CGG - chr7_4:38063492-38063511 None:intergenic 25.0%
! AAACATGTCTTAATATCACA+AGG + chr7_4:38064526-38064545 Msa1152430:three_prime_UTR 25.0%
!! GTTTGAGTATTGTAATACAT+AGG - chr7_4:38064796-38064815 None:intergenic 25.0%
!! ATGAATCATGGGAAATTTTA+AGG - chr7_4:38064900-38064919 None:intergenic 25.0%
! AAGTTCATTCAAGGAAATAT+TGG - chr7_4:38065096-38065115 None:intergenic 25.0%
! AATATTTCCTTGAATGAACT+TGG + chr7_4:38065095-38065114 Msa1152430:three_prime_UTR 25.0%
! ATTGGAAAAATCATTTCTCT+GGG - chr7_4:38065363-38065382 None:intergenic 25.0%
! GTCATCTATGTATTATTCTA+AGG + chr7_4:38065614-38065633 Msa1152430:three_prime_UTR 25.0%
!! AGTGTGAAAATGTTGATGAT+GGG - chr7_4:38057656-38057675 None:intergenic 30.0%
! AAGTGTGAAAATGTTGATGA+TGG - chr7_4:38057657-38057676 None:intergenic 30.0%
CCATAACAGAAAATGAAAGA+AGG - chr7_4:38057819-38057838 None:intergenic 30.0%
! CCTTCTTTCATTTTCTGTTA+TGG + chr7_4:38057816-38057835 Msa1152430:intron 30.0%
TTGACGTACGGAATATTAAT+AGG - chr7_4:38058179-38058198 None:intergenic 30.0%
TATTAATATTCCGTACGTCA+AGG + chr7_4:38058178-38058197 Msa1152430:intron 30.0%
!!! ATTTTTGGTTGTTATCCCTT+CGG + chr7_4:38058522-38058541 Msa1152430:intron 30.0%
!! AAAACCTGAGTTTGATTTGT+CGG - chr7_4:38058616-38058635 None:intergenic 30.0%
TGTACATAAACCAAGCAATT+GGG - chr7_4:38058682-38058701 None:intergenic 30.0%
TTGTACATAAACCAAGCAAT+TGG - chr7_4:38058683-38058702 None:intergenic 30.0%
AAATATGAGCAAGATATGCT+TGG + chr7_4:38059063-38059082 Msa1152430:intron 30.0%
AATATGAGCAAGATATGCTT+GGG + chr7_4:38059064-38059083 Msa1152430:intron 30.0%
!! AGATGCTACTTGTATTGATT+TGG + chr7_4:38059332-38059351 Msa1152430:intron 30.0%
! AATCAAATTGAAATGATGGG+GGG + chr7_4:38059551-38059570 Msa1152430:intron 30.0%
! AAAAGCATGAGATCAAGTTT+AGG - chr7_4:38059716-38059735 None:intergenic 30.0%
!! CTCATGCTTTTTAACAGTAT+TGG + chr7_4:38059725-38059744 Msa1152430:intron 30.0%
AATAGCATGAAATGGGAATT+CGG - chr7_4:38059758-38059777 None:intergenic 30.0%
GAACTTTCATAGACCTAATT+AGG - chr7_4:38059849-38059868 None:intergenic 30.0%
AGCTAAAAACTATAGCATGT+TGG + chr7_4:38060167-38060186 Msa1152430:CDS 30.0%
GCTAAAAACTATAGCATGTT+GGG + chr7_4:38060168-38060187 Msa1152430:CDS 30.0%
ACACAAATCTTCAAAATCCA+AGG - chr7_4:38060205-38060224 None:intergenic 30.0%
!! GAGGTTGTTGTTTCTTTATT+AGG + chr7_4:38060253-38060272 Msa1152430:intron 30.0%
!! CAGTACATTTGCTGATTTAT+TGG + chr7_4:38060507-38060526 Msa1152430:CDS 30.0%
! ATTTATTGGTTATCTTCGCA+AGG + chr7_4:38060521-38060540 Msa1152430:CDS 30.0%
!! CCCATTTATTTGATTTGTTG+AGG - chr7_4:38060551-38060570 None:intergenic 30.0%
TACCGGCATGTTTATATATA+AGG - chr7_4:38060610-38060629 None:intergenic 30.0%
TATATAAACATGCCGGTAAT+TGG + chr7_4:38060612-38060631 Msa1152430:intron 30.0%
!!! GAAACATTTTAGGACATGTT+TGG + chr7_4:38060888-38060907 Msa1152430:intron 30.0%
TTAGTTGAAATGCATAAGCA+AGG - chr7_4:38061126-38061145 None:intergenic 30.0%
! ATTTTTGTGACAGTTAAACC+AGG - chr7_4:38061259-38061278 None:intergenic 30.0%
AAAATGGAGACATTGTTATG+AGG + chr7_4:38061308-38061327 Msa1152430:CDS 30.0%
!! TTCTTTTCAGGATACAAACA+AGG + chr7_4:38061372-38061391 Msa1152430:CDS 30.0%
TTATTCAAATAATCACCGTG+TGG + chr7_4:38061430-38061449 Msa1152430:intron 30.0%
ATTAGAGTGGTATATTCAAC+AGG - chr7_4:38061700-38061719 None:intergenic 30.0%
TGTTCCCATAAAGGAAAAAT+AGG - chr7_4:38061743-38061762 None:intergenic 30.0%
CAACCTATTGGTATATCAAT+GGG + chr7_4:38062031-38062050 Msa1152430:CDS 30.0%
CTGAACTGTATGTGATTTAA+AGG + chr7_4:38062307-38062326 Msa1152430:intron 30.0%
!! TGTGATTTAAAGGTACCTAA+AGG + chr7_4:38062317-38062336 Msa1152430:intron 30.0%
GTGATTACAATGTTGTCAAA+TGG - chr7_4:38062663-38062682 None:intergenic 30.0%
TCACTTAATTCAACTATGGT+AGG + chr7_4:38062759-38062778 Msa1152430:intron 30.0%
!!! AATTTTGGCTGATTTTCTAG+TGG + chr7_4:38062879-38062898 Msa1152430:CDS 30.0%
GTTATCATAACTTTCATGCA+GGG - chr7_4:38063135-38063154 None:intergenic 30.0%
TGTTATCATAACTTTCATGC+AGG - chr7_4:38063136-38063155 None:intergenic 30.0%
!! ATGAGGTTTTTAGATAAGGA+TGG + chr7_4:38063160-38063179 Msa1152430:intron 30.0%
TTTAGATAAGGATGGAAATG+TGG + chr7_4:38063168-38063187 Msa1152430:intron 30.0%
TTAGATAAGGATGGAAATGT+GGG + chr7_4:38063169-38063188 Msa1152430:intron 30.0%
CTTCGATTCATATGCAAATA+TGG + chr7_4:38063425-38063444 Msa1152430:intron 30.0%
TATGGCTAAAGAACCAAATA+TGG + chr7_4:38063443-38063462 Msa1152430:intron 30.0%
CTTAATTTCAAGCAACCATT+TGG - chr7_4:38063583-38063602 None:intergenic 30.0%
ACATGTTCTTAACTATGTGT+TGG - chr7_4:38063714-38063733 None:intergenic 30.0%
AATTAGTGACACATTGATAC+TGG - chr7_4:38063808-38063827 None:intergenic 30.0%
AAGGTTAATTGTTCCAACTA+TGG + chr7_4:38063884-38063903 Msa1152430:intron 30.0%
GAAAACAAAATGTCCATAGT+TGG - chr7_4:38063900-38063919 None:intergenic 30.0%
CACGTATGAAATCAATACTT+TGG + chr7_4:38063994-38064013 Msa1152430:CDS 30.0%
ATTCTACTTCTTTGAATAGC+TGG - chr7_4:38064058-38064077 None:intergenic 30.0%
GGTTAAATAAAGTGGAAAAC+AGG - chr7_4:38064298-38064317 None:intergenic 30.0%
AGTGAAGAGGTTAAATAAAG+TGG - chr7_4:38064306-38064325 None:intergenic 30.0%
! AATGTTTGAGATTTCTGCTT+TGG + chr7_4:38064329-38064348 Msa1152430:three_prime_UTR 30.0%
TTTATACTTTCCTCAACACA+AGG - chr7_4:38064395-38064414 None:intergenic 30.0%
! TTGCAATTTTGCATCATAAC+AGG - chr7_4:38064425-38064444 None:intergenic 30.0%
TCATCAAGGAAACATCATTA+GGG + chr7_4:38064721-38064740 Msa1152430:three_prime_UTR 30.0%
!! AATCATGGGAAATTTTAAGG+TGG - chr7_4:38064897-38064916 None:intergenic 30.0%
! TTTTGATAAGGATGCTCAAA+GGG - chr7_4:38064940-38064959 None:intergenic 30.0%
!! TAGGTCTTTAGGTTTTGATA+AGG - chr7_4:38064952-38064971 None:intergenic 30.0%
CAAGGAAATATTGGAGAATT+TGG - chr7_4:38065087-38065106 None:intergenic 30.0%
CAAACAAGAAACTAAGATGA+AGG - chr7_4:38065249-38065268 None:intergenic 30.0%
CATTGGAAAAATCATTTCTC+TGG - chr7_4:38065364-38065383 None:intergenic 30.0%
TGATGGGAAGAAGAAGAAAA+TGG - chr7_4:38057640-38057659 None:intergenic 35.0%
GAAGGTAAATTGAAGCGATT+GGG - chr7_4:38057695-38057714 None:intergenic 35.0%
AAGAAGAAGAAGAAGAAGGA+AGG - chr7_4:38057713-38057732 None:intergenic 35.0%
GGTGGCAAATCAAAATATGA+AGG - chr7_4:38057983-38058002 None:intergenic 35.0%
AATGCAAGAGAAACATCAAG+TGG - chr7_4:38058004-38058023 None:intergenic 35.0%
ACATGCATTTATGTCCAGTT+TGG + chr7_4:38058201-38058220 Msa1152430:intron 35.0%
CGGAATGAATTTGTAGTGTT+TGG - chr7_4:38058378-38058397 None:intergenic 35.0%
GTCAAGAGGTAAGTAAAATC+TGG + chr7_4:38058583-38058602 Msa1152430:intron 35.0%
TTCCTGAACAATTCGTTCTT+TGG + chr7_4:38058634-38058653 Msa1152430:intron 35.0%
CATGTGAGACTATTTAAGAG+AGG - chr7_4:38058849-38058868 None:intergenic 35.0%
CTAGCACATTGACAAATTTG+AGG - chr7_4:38059394-38059413 None:intergenic 35.0%
! TATACAATCTGGTTCGTGAA+GGG - chr7_4:38059426-38059445 None:intergenic 35.0%
! TTTGGGATTTAAAGCAACAC+AGG + chr7_4:38059456-38059475 Msa1152430:intron 35.0%
! TGATGTTTGCATCTTTTTGG+AGG + chr7_4:38059627-38059646 Msa1152430:intron 35.0%
!! GCTTTGGAATAGCATGAAAT+GGG - chr7_4:38059765-38059784 None:intergenic 35.0%
!! AGCTTTGGAATAGCATGAAA+TGG - chr7_4:38059766-38059785 None:intergenic 35.0%
TTTCATGCTATTCCAAAGCT+TGG + chr7_4:38059766-38059785 Msa1152430:CDS 35.0%
! CTAGTTGTGATTGATTCTCA+GGG + chr7_4:38059880-38059899 Msa1152430:intron 35.0%
GAAGTTACTACTTCTCAAAG+AGG + chr7_4:38060234-38060253 Msa1152430:intron 35.0%
TCTTTGCTTTGTAAATCAGG+TGG + chr7_4:38060441-38060460 Msa1152430:intron 35.0%
TGAACATCCGTAGAATTTCA+CGG + chr7_4:38060666-38060685 Msa1152430:intron 35.0%
!!! TATATTTTTTTCTGGGTGCG+AGG - chr7_4:38060709-38060728 None:intergenic 35.0%
AGTGAATGAATGTGAACGTT+TGG + chr7_4:38060734-38060753 Msa1152430:intron 35.0%
! ACGTTTGGTCTTTGATATAG+TGG + chr7_4:38060749-38060768 Msa1152430:intron 35.0%
! CGTTTGGTCTTTGATATAGT+GGG + chr7_4:38060750-38060769 Msa1152430:intron 35.0%
GAACTTCACACATTAACAAG+AGG + chr7_4:38060806-38060825 Msa1152430:intron 35.0%
TTATTTCCACCTTCTTTCGT+AGG - chr7_4:38061011-38061030 None:intergenic 35.0%
! GTGGAAATAAAGCGACATTT+TGG + chr7_4:38061021-38061040 Msa1152430:intron 35.0%
TAGTAATTGTGATGTGAAGC+AGG - chr7_4:38061177-38061196 None:intergenic 35.0%
! TGAAGGAGTCAATTCTTTTC+AGG + chr7_4:38061360-38061379 Msa1152430:CDS 35.0%
CAAACAAGGTAACGTTTATG+TGG + chr7_4:38061386-38061405 Msa1152430:intron 35.0%
! GTTGTATTGATGAAACCACA+CGG - chr7_4:38061448-38061467 None:intergenic 35.0%
TAAAAGAGGATACGTGTACT+AGG - chr7_4:38061548-38061567 None:intergenic 35.0%
AGACATGCAGAATACTACAA+CGG - chr7_4:38061586-38061605 None:intergenic 35.0%
TGTAGTATTCTGCATGTCTT+AGG + chr7_4:38061587-38061606 Msa1152430:intron 35.0%
GAATAAGATCAGCATTTGTC+TGG + chr7_4:38061614-38061633 Msa1152430:intron 35.0%
!! TTGTCTGGTTCTATCATCTA+TGG + chr7_4:38061629-38061648 Msa1152430:intron 35.0%
GCAACCTATTGGTATATCAA+TGG + chr7_4:38062030-38062049 Msa1152430:CDS 35.0%
ATGCCCATTGATATACCAAT+AGG - chr7_4:38062037-38062056 None:intergenic 35.0%
!! TGTCTACAGCTCATTGATTT+CGG - chr7_4:38062175-38062194 None:intergenic 35.0%
! TTCAACTGTCTGGTTCAATT+TGG + chr7_4:38062209-38062228 Msa1152430:intron 35.0%
!! TTTAAAGGTACCTAAAGGAG+AGG + chr7_4:38062322-38062341 Msa1152430:intron 35.0%
CAAATTGTTTCCTCTCCTTT+AGG - chr7_4:38062335-38062354 None:intergenic 35.0%
CTAAAGGAGAGGAAACAATT+TGG + chr7_4:38062333-38062352 Msa1152430:CDS 35.0%
!! TTGATTTGGAAAGCTGCTAA+TGG - chr7_4:38062363-38062382 None:intergenic 35.0%
! CAAGTTTCTGTTGGTTGATT+TGG - chr7_4:38062377-38062396 None:intergenic 35.0%
GCATTTGAACAAGTTTCTGT+TGG - chr7_4:38062386-38062405 None:intergenic 35.0%
CTATGCAAGTTGTATGAAAG+TGG + chr7_4:38062444-38062463 Msa1152430:CDS 35.0%
GAGAATACCAGTACACTATA+GGG - chr7_4:38062632-38062651 None:intergenic 35.0%
AGAGAATACCAGTACACTAT+AGG - chr7_4:38062633-38062652 None:intergenic 35.0%
!!! TTGGTGTTTTTTGTTGGTGA+GGG - chr7_4:38063023-38063042 None:intergenic 35.0%
AACACCAACAAAAAACTCCA+AGG + chr7_4:38063035-38063054 Msa1152430:intron 35.0%
TAAATTCCATTCTTGGACCT+TGG - chr7_4:38063055-38063074 None:intergenic 35.0%
TTAAAATGAGTGGATGGTGA+TGG + chr7_4:38063075-38063094 Msa1152430:intron 35.0%
!! ACTACTTGGACTTGATTTGT+TGG + chr7_4:38063264-38063283 Msa1152430:intron 35.0%
CATGGTTCTTTAGCCATATT+TGG - chr7_4:38063459-38063478 None:intergenic 35.0%
CAAATATGGCTAAAGAACCA+TGG + chr7_4:38063439-38063458 Msa1152430:intron 35.0%
! CAAAATTGTGGTTTGTCTAG+TGG - chr7_4:38063646-38063665 None:intergenic 35.0%
ATTTGCAAGCTATATAGCAC+TGG + chr7_4:38063686-38063705 Msa1152430:intron 35.0%
! CATTTTTGTTCACATTGGGA+AGG + chr7_4:38063865-38063884 Msa1152430:intron 35.0%
! TTTTCCTTCTCTAATTGTGC+AGG + chr7_4:38063934-38063953 Msa1152430:intron 35.0%
GAAATCAATACTTTGGTCAC+AGG + chr7_4:38064001-38064020 Msa1152430:CDS 35.0%
GAATACAATAGTGTCTGTTG+AGG - chr7_4:38064100-38064119 None:intergenic 35.0%
CAGACACTATTGTATTCCAT+TGG + chr7_4:38064103-38064122 Msa1152430:three_prime_UTR 35.0%
! TCTCCTCTTTTTCCTTTTGT+TGG + chr7_4:38064241-38064260 Msa1152430:three_prime_UTR 35.0%
TCACCAACAAAAGGAAAAAG+AGG - chr7_4:38064247-38064266 None:intergenic 35.0%
TCATTGCATTCACCAACAAA+AGG - chr7_4:38064256-38064275 None:intergenic 35.0%
CTCAAACATTGAAAGTGAAG+AGG - chr7_4:38064319-38064338 None:intergenic 35.0%
! TTTTCAATTTCCCATGCACT+TGG - chr7_4:38064452-38064471 None:intergenic 35.0%
TAACTTAGATGCATCAGATG+TGG - chr7_4:38064494-38064513 None:intergenic 35.0%
ATATAGTAGCTTCCAGATGA+AGG + chr7_4:38064674-38064693 Msa1152430:three_prime_UTR 35.0%
CTCATCAAGGAAACATCATT+AGG + chr7_4:38064720-38064739 Msa1152430:three_prime_UTR 35.0%
!! GCATTGATTAGTGTTCATTC+AGG - chr7_4:38064755-38064774 None:intergenic 35.0%
TGAAGGAAAGAAAAAGGGAA+AGG + chr7_4:38064850-38064869 Msa1152430:three_prime_UTR 35.0%
AAAGGGAAAGGAAAAACAGA+AGG + chr7_4:38064862-38064881 Msa1152430:three_prime_UTR 35.0%
!!! TGGGAAATTTTAAGGTGGTT+TGG - chr7_4:38064892-38064911 None:intergenic 35.0%
AAGGGTGAATGATGAATCAT+GGG - chr7_4:38064911-38064930 None:intergenic 35.0%
ATGCTCAAAGGGAAAATCAA+GGG - chr7_4:38064929-38064948 None:intergenic 35.0%
!! GTTTTGATAAGGATGCTCAA+AGG - chr7_4:38064941-38064960 None:intergenic 35.0%
TACAGTTCCAAGTTCATTCA+AGG - chr7_4:38065105-38065124 None:intergenic 35.0%
GTGTTTGAGTAGTTCATTCA+TGG - chr7_4:38065138-38065157 None:intergenic 35.0%
CTTCTAACTTTGTCAAGAAC+TGG + chr7_4:38065170-38065189 Msa1152430:three_prime_UTR 35.0%
ACTCAATGATGAATTGGCTA+AGG - chr7_4:38065219-38065238 None:intergenic 35.0%
GAGAGAACTCAATGATGAAT+TGG - chr7_4:38065225-38065244 None:intergenic 35.0%
! TTTTCCAATGAACTGAACCA+TGG + chr7_4:38065374-38065393 Msa1152430:three_prime_UTR 35.0%
CTTCATAGTATTGTCCATAG+TGG + chr7_4:38065444-38065463 Msa1152430:three_prime_UTR 35.0%
TTGATGAATTTCTCCAAGGA+TGG - chr7_4:38065574-38065593 None:intergenic 35.0%
GCATTTGATGAATTTCTCCA+AGG - chr7_4:38065578-38065597 None:intergenic 35.0%
GTAAATTGAAGCGATTGGGT+TGG - chr7_4:38057691-38057710 None:intergenic 40.0%
GGAAGGTAAATTGAAGCGAT+TGG - chr7_4:38057696-38057715 None:intergenic 40.0%
GTGGAAGAAGAAGAAGAAGA+AGG - chr7_4:38057717-38057736 None:intergenic 40.0%
GATCACAGGATCATAATGCA+CGG - chr7_4:38057856-38057875 None:intergenic 40.0%
! ATTAGGTTGTTACCACAAGG+AGG - chr7_4:38058055-38058074 None:intergenic 40.0%
! GTGATTAGGTTGTTACCACA+AGG - chr7_4:38058058-38058077 None:intergenic 40.0%
CGTACGGAATATTAATAGGC+TGG - chr7_4:38058175-38058194 None:intergenic 40.0%
AAATGCATGTCCTTGACGTA+CGG - chr7_4:38058191-38058210 None:intergenic 40.0%
GCAGATAGATGATAAGCTAG+CGG - chr7_4:38058398-38058417 None:intergenic 40.0%
ATGCTTAGTTAGGCTCTGTT+TGG - chr7_4:38058456-38058475 None:intergenic 40.0%
TGATACGAAGTTTGGTCAAG+AGG + chr7_4:38058569-38058588 Msa1152430:intron 40.0%
!! GAGTTTGATTTGTCGGTTCT+TGG - chr7_4:38058609-38058628 None:intergenic 40.0%
AGAACCGACAAATCAAACTC+AGG + chr7_4:38058609-38058628 Msa1152430:intron 40.0%
CACCAAAGAACGAATTGTTC+AGG - chr7_4:38058639-38058658 None:intergenic 40.0%
CTGAACAATTCGTTCTTTGG+TGG + chr7_4:38058637-38058656 Msa1152430:intron 40.0%
TAAGCTCTACAGGGTAGTTT+AGG - chr7_4:38058778-38058797 None:intergenic 40.0%
ACCCTGTAGAGCTTAATAAG+CGG + chr7_4:38058783-38058802 Msa1152430:intron 40.0%
TCCGCTTATTAAGCTCTACA+GGG - chr7_4:38058787-38058806 None:intergenic 40.0%
! GATGAAAGTGAGAGAGTGTA+TGG + chr7_4:38059194-38059213 Msa1152430:intron 40.0%
AAAAGAAAAGGAGCTTGCCT+GGG - chr7_4:38059244-38059263 None:intergenic 40.0%
AAAAAGAAAAGGAGCTTGCC+TGG - chr7_4:38059245-38059264 None:intergenic 40.0%
! CTATACAATCTGGTTCGTGA+AGG - chr7_4:38059427-38059446 None:intergenic 40.0%
!! AACACAGGAAGCATCTTTGA+GGG + chr7_4:38059471-38059490 Msa1152430:intron 40.0%
!! TCTTTTTGGAGGAAGAGTGA+AGG + chr7_4:38059638-38059657 Msa1152430:intron 40.0%
! TATTCCAAAGCTTGGTGAAC+TGG + chr7_4:38059774-38059793 Msa1152430:CDS 40.0%
! ATTCCAAAGCTTGGTGAACT+GGG + chr7_4:38059775-38059794 Msa1152430:CDS 40.0%
TATTGCTGGTGGTACAATCA+AGG + chr7_4:38059798-38059817 Msa1152430:CDS 40.0%
! GCTAGTTGTGATTGATTCTC+AGG + chr7_4:38059879-38059898 Msa1152430:intron 40.0%
! GTGATTGATTCTCAGGGTTA+TGG + chr7_4:38059886-38059905 Msa1152430:intron 40.0%
!! CATTTTGGTCCATTCATCCT+TGG + chr7_4:38059987-38060006 Msa1152430:CDS 40.0%
CACCAAGTATAGCATTGTGT+GGG + chr7_4:38060104-38060123 Msa1152430:intron 40.0%
TTTGAAGACCACAGCAACTA+AGG + chr7_4:38060313-38060332 Msa1152430:CDS 40.0%
TGCTTTGTAAATCAGGTGGA+AGG + chr7_4:38060445-38060464 Msa1152430:intron 40.0%
TTTGTAAATCAGGTGGAAGG+TGG + chr7_4:38060448-38060467 Msa1152430:intron 40.0%
GGAAAGTCCGTGAAATTCTA+CGG - chr7_4:38060676-38060695 None:intergenic 40.0%
CCAAATTTATGGCCACTACT+CGG + chr7_4:38060780-38060799 Msa1152430:intron 40.0%
TGATGTGAAGCAGGACATAA+AGG - chr7_4:38061168-38061187 None:intergenic 40.0%
ATCGTAAAAAAGGATGCACC+TGG + chr7_4:38061238-38061257 Msa1152430:CDS 40.0%
GGGCTTAGAATCGTACAAAA+TGG + chr7_4:38061292-38061311 Msa1152430:CDS 40.0%
! GAAAGTTTTTGTCCCTGATG+AGG + chr7_4:38061330-38061349 Msa1152430:CDS 40.0%
CTTCAATTCTGTCCTCATCA+GGG - chr7_4:38061345-38061364 None:intergenic 40.0%
!! ACAGCAACTGGTTCTAAAAG+AGG - chr7_4:38061562-38061581 None:intergenic 40.0%
! GTGCACTGGCAATAAAAGAA+TGG - chr7_4:38061655-38061674 None:intergenic 40.0%
TTTATTGCCAGTGCACTAGA+AGG + chr7_4:38061659-38061678 Msa1152430:intron 40.0%
GAGTGGTATATTCAACAGGT+TGG - chr7_4:38061696-38061715 None:intergenic 40.0%
!! TTTCCTTCTCTCTGAAGCAT+TGG + chr7_4:38061818-38061837 Msa1152430:intron 40.0%
ATTCAAAGCTCACTAGTCAG+CGG - chr7_4:38061877-38061896 None:intergenic 40.0%
GCATCTATGATATGTGTCAC+AGG + chr7_4:38062053-38062072 Msa1152430:CDS 40.0%
!! CATTGGTTCGATATCCAGTT+TGG - chr7_4:38062109-38062128 None:intergenic 40.0%
! ACCAATGAGACTTTTGATCG+TGG + chr7_4:38062122-38062141 Msa1152430:intron 40.0%
ACCACGATCAAAAGTCTCAT+TGG - chr7_4:38062126-38062145 None:intergenic 40.0%
GTTCAAGCGATGATTCTTGT+TGG + chr7_4:38062414-38062433 Msa1152430:CDS 40.0%
AAGCGATGATTCTTGTTGGT+TGG + chr7_4:38062418-38062437 Msa1152430:CDS 40.0%
TGAAAGTGGTAAAATGACCC+CGG + chr7_4:38062458-38062477 Msa1152430:CDS 40.0%
TGCCTTAGTGTAGCACAATT+TGG + chr7_4:38062541-38062560 Msa1152430:intron 40.0%
GTCCAAATTGTGCTACACTA+AGG - chr7_4:38062546-38062565 None:intergenic 40.0%
ATAGTAGCCCTATAGTGTAC+TGG + chr7_4:38062622-38062641 Msa1152430:intron 40.0%
! TTCAGTCATGGATTACCTTG+AGG + chr7_4:38062809-38062828 Msa1152430:intron 40.0%
! TCAGTCATGGATTACCTTGA+GGG + chr7_4:38062810-38062829 Msa1152430:intron 40.0%
!!! TTTTTTGTTGGTGAGGGCTT+TGG - chr7_4:38063017-38063036 None:intergenic 40.0%
!!! GTTGGTGTTTTTTGTTGGTG+AGG - chr7_4:38063024-38063043 None:intergenic 40.0%
!!! TGGACCTTGGAGTTTTTTGT+TGG - chr7_4:38063042-38063061 None:intergenic 40.0%
AAAACTCCAAGGTCCAAGAA+TGG + chr7_4:38063046-38063065 Msa1152430:intron 40.0%
AAGTCCAAGTAGTTAGCATG+AGG - chr7_4:38063257-38063276 None:intergenic 40.0%
!! TGGACTTGATTTGTTGGTGA+AGG + chr7_4:38063270-38063289 Msa1152430:intron 40.0%
! GTTTTCGGTCTTCAAATCCA+TGG - chr7_4:38063477-38063496 None:intergenic 40.0%
AATGCCTGCACAATTAGAGA+AGG - chr7_4:38063941-38063960 None:intergenic 40.0%
! TTGAATAGCTGGCTTAAAGC+TGG - chr7_4:38064047-38064066 None:intergenic 40.0%
GTTCATTCTTCACACAGAGT+GGG - chr7_4:38064373-38064392 None:intergenic 40.0%
GAAGAATGAACCTTGTGTTG+AGG + chr7_4:38064382-38064401 Msa1152430:three_prime_UTR 40.0%
ATTGCAAATGTCCAAGTGCA+TGG + chr7_4:38064438-38064457 Msa1152430:three_prime_UTR 40.0%
TTGCAAATGTCCAAGTGCAT+GGG + chr7_4:38064439-38064458 Msa1152430:three_prime_UTR 40.0%
TTTCCTTGATGAGCAAGATC+AGG - chr7_4:38064713-38064732 None:intergenic 40.0%
CAAGGGTGAATGATGAATCA+TGG - chr7_4:38064912-38064931 None:intergenic 40.0%
GATGCTCAAAGGGAAAATCA+AGG - chr7_4:38064930-38064949 None:intergenic 40.0%
AAAAAGTTGAGAACCTGAGC+TGG + chr7_4:38065002-38065021 Msa1152430:three_prime_UTR 40.0%
TGACAAATGCTGATGCTTTG+AGG - chr7_4:38065064-38065083 None:intergenic 40.0%
AGTTCATTCATGGCAGAAGA+GGG - chr7_4:38065128-38065147 None:intergenic 40.0%
TAGTTCATTCATGGCAGAAG+AGG - chr7_4:38065129-38065148 None:intergenic 40.0%
TACTCAAACACACTCTTCCA+TGG + chr7_4:38065147-38065166 Msa1152430:three_prime_UTR 40.0%
CTTGACAAAGTTAGAAGCCA+TGG - chr7_4:38065167-38065186 None:intergenic 40.0%
CTAACTTTGTCAAGAACTGG+TGG + chr7_4:38065173-38065192 Msa1152430:three_prime_UTR 40.0%
! TAAGGTACATGAGAGTATGG+CGG - chr7_4:38065201-38065220 None:intergenic 40.0%
AGGATTTGTCAGATGATCAG+AGG - chr7_4:38065289-38065308 None:intergenic 40.0%
! ACAAGATGAAGTGTTAACCC+TGG + chr7_4:38065323-38065342 Msa1152430:three_prime_UTR 40.0%
AATCATTTCTCTGGGTTGCA+GGG - chr7_4:38065355-38065374 None:intergenic 40.0%
AAATCATTTCTCTGGGTTGC+AGG - chr7_4:38065356-38065375 None:intergenic 40.0%
! TTCTTCTTTTCTCACCACCA+TGG - chr7_4:38065394-38065413 None:intergenic 40.0%
! AAGAGTTGGCTGATTCTGAT+AGG - chr7_4:38065496-38065515 None:intergenic 40.0%
TCAACAACAGCAACAAGAGT+TGG - chr7_4:38065510-38065529 None:intergenic 40.0%
TTTGACGAATCATCCATCCT+TGG + chr7_4:38065558-38065577 Msa1152430:three_prime_UTR 40.0%
!! CGATTGGGTTGGTTTGTGTT+GGG - chr7_4:38057680-38057699 None:intergenic 45.0%
!! TTGTGGATTGGAACGAGTCA+TGG - chr7_4:38057742-38057761 None:intergenic 45.0%
ATGACTCGTTCCAATCCACA+AGG + chr7_4:38057741-38057760 Msa1152430:CDS 45.0%
GAGAGAGATACCTTGTGGAT+TGG - chr7_4:38057754-38057773 None:intergenic 45.0%
AGAGAGAGAGAGATACCTTG+TGG - chr7_4:38057759-38057778 None:intergenic 45.0%
GCAAGAGAAACATCAAGTGG+TGG - chr7_4:38058001-38058020 None:intergenic 45.0%
ACCACAAGGAGGAAAAGTAG+AGG - chr7_4:38058044-38058063 None:intergenic 45.0%
TTGTTATCCCTTCGGTTTCC+TGG + chr7_4:38058530-38058549 Msa1152430:intron 45.0%
TGTTATCCCTTCGGTTTCCT+GGG + chr7_4:38058531-38058550 Msa1152430:intron 45.0%
ACCAAACTTCGTATCACCAG+GGG - chr7_4:38058565-38058584 None:intergenic 45.0%
GACCAAACTTCGTATCACCA+GGG - chr7_4:38058566-38058585 None:intergenic 45.0%
TGACCAAACTTCGTATCACC+AGG - chr7_4:38058567-38058586 None:intergenic 45.0%
CTCCGCTTATTAAGCTCTAC+AGG - chr7_4:38058788-38058807 None:intergenic 45.0%
CAACTATTGGGTCTGTGGAT+TGG - chr7_4:38058884-38058903 None:intergenic 45.0%
CAATCCACAGACCCAATAGT+TGG + chr7_4:38058882-38058901 Msa1152430:intron 45.0%
TCAACCAACTATTGGGTCTG+TGG - chr7_4:38058889-38058908 None:intergenic 45.0%
GAGCAAGATATGCTTGGGTT+TGG + chr7_4:38059069-38059088 Msa1152430:intron 45.0%
CAAGATATGCTTGGGTTTGG+AGG + chr7_4:38059072-38059091 Msa1152430:intron 45.0%
!! CGATGACTTGTTGAAACCAG+AGG + chr7_4:38059158-38059177 Msa1152430:CDS 45.0%
TATTGCTCCCATAATGACCC+AGG + chr7_4:38059224-38059243 Msa1152430:intron 45.0%
!! CAACACAGGAAGCATCTTTG+AGG + chr7_4:38059470-38059489 Msa1152430:intron 45.0%
ATACCCAGTTCACCAAGCTT+TGG - chr7_4:38059781-38059800 None:intergenic 45.0%
AGCGATAGCACTTCCAGTAA+CGG - chr7_4:38059926-38059945 None:intergenic 45.0%
! TGAGCATTGCCAAGGATGAA+TGG - chr7_4:38059999-38060018 None:intergenic 45.0%
TCCTTGGCAATGCTCACTAT+AGG + chr7_4:38060003-38060022 Msa1152430:CDS 45.0%
! ACCTATAGTGAGCATTGCCA+AGG - chr7_4:38060007-38060026 None:intergenic 45.0%
CCACACAATGCTATACTTGG+TGG - chr7_4:38060106-38060125 None:intergenic 45.0%
CCACCAAGTATAGCATTGTG+TGG + chr7_4:38060103-38060122 Msa1152430:intron 45.0%
GACCCACACAATGCTATACT+TGG - chr7_4:38060109-38060128 None:intergenic 45.0%
!! GCAAAAGTATCTACCGTCGT+TGG + chr7_4:38060141-38060160 Msa1152430:CDS 45.0%
!!! GTTTTTAGCTGTGCCAACGA+CGG - chr7_4:38060157-38060176 None:intergenic 45.0%
!! GTTGGGTTAGTTGTCTTCCT+TGG + chr7_4:38060185-38060204 Msa1152430:intron 45.0%
TCCATAGTCAGGTTCAGTCA+AGG - chr7_4:38060279-38060298 None:intergenic 45.0%
CTTGCATCACTTCCATAGTC+AGG - chr7_4:38060290-38060309 None:intergenic 45.0%
ACACTGAACCTTAGTTGCTG+TGG - chr7_4:38060324-38060343 None:intergenic 45.0%
TAAATCAGGTGGAAGGTGGT+TGG + chr7_4:38060452-38060471 Msa1152430:intron 45.0%
! TGTTTCCTATCCACCGCTTT+TGG - chr7_4:38060489-38060508 None:intergenic 45.0%
AGATCTCTGTGGCCTTTAGA+CGG - chr7_4:38060647-38060666 None:intergenic 45.0%
TACGGATGTTCAGATCTCTG+TGG - chr7_4:38060658-38060677 None:intergenic 45.0%
CCGAGTAGTGGCCATAAATT+TGG - chr7_4:38060783-38060802 None:intergenic 45.0%
ATGGTCCAACCTACGAAAGA+AGG + chr7_4:38060999-38061018 Msa1152430:intron 45.0%
TTCCACCTTCTTTCGTAGGT+TGG - chr7_4:38061007-38061026 None:intergenic 45.0%
CCTTCAATTCTGTCCTCATC+AGG - chr7_4:38061346-38061365 None:intergenic 45.0%
CCTGATGAGGACAGAATTGA+AGG + chr7_4:38061343-38061362 Msa1152430:CDS 45.0%
GAGGATACGTGTACTAGGAT+TGG - chr7_4:38061543-38061562 None:intergenic 45.0%
TCTCCAATGCTTCAGAGAGA+AGG - chr7_4:38061824-38061843 None:intergenic 45.0%
ATGGTTGCTTGGCAACCTAT+TGG + chr7_4:38062019-38062038 Msa1152430:CDS 45.0%
!! CTACAGCTCATTGATTTCGG+TGG - chr7_4:38062172-38062191 None:intergenic 45.0%
CTGTTCACGTTTCAACTGTC+TGG + chr7_4:38062199-38062218 Msa1152430:intron 45.0%
GAAAGTGGTAAAATGACCCC+GGG + chr7_4:38062459-38062478 Msa1152430:CDS 45.0%
! GCAAGAGAAACAGCTGCTTT+GGG + chr7_4:38062832-38062851 Msa1152430:CDS 45.0%
! CAAGAGAAACAGCTGCTTTG+GGG + chr7_4:38062833-38062852 Msa1152430:CDS 45.0%
!! GCTTGGTGGCAATGGAATTT+TGG + chr7_4:38062864-38062883 Msa1152430:CDS 45.0%
!! GGCTGATTTTCTAGTGGCTA+AGG + chr7_4:38062885-38062904 Msa1152430:CDS 45.0%
TAGCATGAGGCAAGGTTCAT+AGG - chr7_4:38063244-38063263 None:intergenic 45.0%
CAAGTAGTTAGCATGAGGCA+AGG - chr7_4:38063252-38063271 None:intergenic 45.0%
CTTGCCTCATGCTAACTACT+TGG + chr7_4:38063250-38063269 Msa1152430:intron 45.0%
! TCTGCAAGCTCGTACTTTTG+TGG - chr7_4:38063614-38063633 None:intergenic 45.0%
GAACCTATCTACACCTACGA+AGG + chr7_4:38063971-38063990 Msa1152430:CDS 45.0%
GATTTCATACGTGCCTTCGT+AGG - chr7_4:38063987-38064006 None:intergenic 45.0%
GTCACAGGAAGAGAAGTTAC+TGG + chr7_4:38064016-38064035 Msa1152430:CDS 45.0%
GGTTCATTCTTCACACAGAG+TGG - chr7_4:38064374-38064393 None:intergenic 45.0%
AAATCAGAGGCAGCTGTATG+AGG + chr7_4:38064613-38064632 Msa1152430:three_prime_UTR 45.0%
TGAGGTATGAGTACAGATCC+TGG + chr7_4:38064631-38064650 Msa1152430:three_prime_UTR 45.0%
TATGAGTACAGATCCTGGTC+TGG + chr7_4:38064636-38064655 Msa1152430:three_prime_UTR 45.0%
CATGCAATGCATCCTTCATC+TGG - chr7_4:38064689-38064708 None:intergenic 45.0%
CAGATGAAGGATGCATTGCA+TGG + chr7_4:38064687-38064706 Msa1152430:three_prime_UTR 45.0%
CAGCTCAAGGTTAGGTCTTT+AGG - chr7_4:38064963-38064982 None:intergenic 45.0%
GCAGATATTGAAACCAGCTC+AGG - chr7_4:38065018-38065037 None:intergenic 45.0%
GGCTAAGGTACATGAGAGTA+TGG - chr7_4:38065204-38065223 None:intergenic 45.0%
TCCAATGAACTGAACCATGG+TGG + chr7_4:38065377-38065396 Msa1152430:three_prime_UTR 45.0%
ACCACCATGGTTCAGTTCAT+TGG - chr7_4:38065381-38065400 None:intergenic 45.0%
! AACAGAGTACTCTGCCACTA+TGG - chr7_4:38065461-38065480 None:intergenic 45.0%
!!! AATATTTATATTTGTTAAAA+TGG + chr7_4:38060027-38060046 Msa1152430:intron 5.0%
!! AAAAATATAAAAAAAAATGA+AGG + chr7_4:38064833-38064852 Msa1152430:three_prime_UTR 5.0%
!! GCGATTGGGTTGGTTTGTGT+TGG - chr7_4:38057681-38057700 None:intergenic 50.0%
ATTGGAACGAGTCATGGTGG+TGG - chr7_4:38057736-38057755 None:intergenic 50.0%
! TGGATTGGAACGAGTCATGG+TGG - chr7_4:38057739-38057758 None:intergenic 50.0%
CAAGGAGGAAAAGTAGAGGC+TGG - chr7_4:38058040-38058059 None:intergenic 50.0%
!! GCCTCTACTTTTCCTCCTTG+TGG + chr7_4:38058040-38058059 Msa1152430:CDS 50.0%
CAAACTTCGTATCACCAGGG+GGG - chr7_4:38058563-38058582 None:intergenic 50.0%
CCAAACTTCGTATCACCAGG+GGG - chr7_4:38058564-38058583 None:intergenic 50.0%
ACCACTTGAGCCCAATTGCT+TGG + chr7_4:38058669-38058688 Msa1152430:intron 50.0%
ACCAAGCAATTGGGCTCAAG+TGG - chr7_4:38058673-38058692 None:intergenic 50.0%
CTTGTTGAAACCAGAGGAGC+AGG + chr7_4:38059164-38059183 Msa1152430:CDS 50.0%
AACCAGAGGAGCAGGCTATT+AGG + chr7_4:38059172-38059191 Msa1152430:CDS 50.0%
ATCCTAATAGCCTGCTCCTC+TGG - chr7_4:38059177-38059196 None:intergenic 50.0%
GAGCTTGCCTGGGTCATTAT+GGG - chr7_4:38059234-38059253 None:intergenic 50.0%
! CTTGGTGAACTGGGTATTGC+TGG + chr7_4:38059784-38059803 Msa1152430:CDS 50.0%
TCTCAGGGTTATGGTTGTCC+TGG + chr7_4:38059895-38059914 Msa1152430:intron 50.0%
! TGTCCTGGTCTTTCCGTTAC+TGG + chr7_4:38059910-38059929 Msa1152430:CDS 50.0%
! CTTCCAGTAACGGAAAGACC+AGG - chr7_4:38059916-38059935 None:intergenic 50.0%
GCCTTGACTGAACCTGACTA+TGG + chr7_4:38060275-38060294 Msa1152430:CDS 50.0%
GAAGGTGGTTGGATCCTTGA+GGG + chr7_4:38060463-38060482 Msa1152430:CDS 50.0%
! CGGGCTAGAATGCCAATTAC+CGG - chr7_4:38060627-38060646 None:intergenic 50.0%
TGGCATTCTAGCCCGTCTAA+AGG + chr7_4:38060632-38060651 Msa1152430:intron 50.0%
GATCTCTGTGGCCTTTAGAC+GGG - chr7_4:38060646-38060665 None:intergenic 50.0%
TGGGTGCGAGGAAATAGTAC+AGG - chr7_4:38060697-38060716 None:intergenic 50.0%
! GTGAAGTTCTAGCCGAGTAG+TGG - chr7_4:38060795-38060814 None:intergenic 50.0%
GTCCAACCTACGAAAGAAGG+TGG + chr7_4:38061002-38061021 Msa1152430:intron 50.0%
TACTACAACGGCACAGCAAC+TGG - chr7_4:38061574-38061593 None:intergenic 50.0%
!! GCATTAGCCTTCTAGTGCAC+TGG - chr7_4:38061669-38061688 None:intergenic 50.0%
GTGCACTAGAAGGCTAATGC+TGG + chr7_4:38061669-38061688 Msa1152430:intron 50.0%
!! ACTTGCTGTTTCGCGTGTGA+TGG + chr7_4:38062000-38062019 Msa1152430:CDS 50.0%
TTTCGCGTGTGATGGTTGCT+TGG + chr7_4:38062008-38062027 Msa1152430:CDS 50.0%
TTTCCCAAGCTAGCATGACC+CGG - chr7_4:38062480-38062499 None:intergenic 50.0%
!! AGCTGTTTCTCTTGCCCTCA+AGG - chr7_4:38062827-38062846 None:intergenic 50.0%
GGCAAGAGAAACAGCTGCTT+TGG + chr7_4:38062831-38062850 Msa1152430:CDS 50.0%
! CGAGAATTGCTTGGTGGCAA+TGG + chr7_4:38062856-38062875 Msa1152430:CDS 50.0%
!! TGAGTGGATGGTGATGGTGA+TGG + chr7_4:38063081-38063100 Msa1152430:intron 50.0%
GAGGCAAGGTTCATAGGTCT+TGG - chr7_4:38063238-38063257 None:intergenic 50.0%
GTGCCTTCGTAGGTGTAGAT+AGG - chr7_4:38063977-38063996 None:intergenic 50.0%
TGGCCTGATCTTGCTCATCA+AGG + chr7_4:38064707-38064726 Msa1152430:three_prime_UTR 50.0%
CTGAGCTTCAGCTCAAGGTT+AGG - chr7_4:38064971-38064990 None:intergenic 50.0%
TGTTGCTGAGCTTCAGCTCA+AGG - chr7_4:38064976-38064995 None:intergenic 50.0%
TGTCAGATGATCAGAGGCAG+AGG - chr7_4:38065283-38065302 None:intergenic 50.0%
GGGTTGCAGGGTTTAAACCA+GGG - chr7_4:38065343-38065362 None:intergenic 50.0%
TGGGTTGCAGGGTTTAAACC+AGG - chr7_4:38065344-38065363 None:intergenic 50.0%
GTAGAGGCTGGAGTTGCTTG+TGG - chr7_4:38058028-38058047 None:intergenic 55.0%
ATCCCTTCGGTTTCCTGGGA+AGG + chr7_4:38058535-38058554 Msa1152430:intron 55.0%
TCCCTTCGGTTTCCTGGGAA+GGG + chr7_4:38058536-38058555 Msa1152430:intron 55.0%
CCCCCTGGTGATACGAAGTT+TGG + chr7_4:38058561-38058580 Msa1152430:intron 55.0%
GGAGCTTGCCTGGGTCATTA+TGG - chr7_4:38059235-38059254 None:intergenic 55.0%
! GGTGAACTGGGTATTGCTGG+TGG + chr7_4:38059787-38059806 Msa1152430:CDS 55.0%
GGAAGGTGGTTGGATCCTTG+AGG + chr7_4:38060462-38060481 Msa1152430:CDS 55.0%
GGATCCTTGAGGGCCAAAAG+CGG + chr7_4:38060473-38060492 Msa1152430:CDS 55.0%
TTCCCAAGCTAGCATGACCC+GGG - chr7_4:38062479-38062498 None:intergenic 55.0%
! GGGTCATGCTAGCTTGGGAA+AGG + chr7_4:38062479-38062498 Msa1152430:CDS 55.0%
!! GCTTTGGGGCGAGAATTGCT+TGG + chr7_4:38062847-38062866 Msa1152430:CDS 55.0%
TTGGGGCGAGAATTGCTTGG+TGG + chr7_4:38062850-38062869 Msa1152430:CDS 55.0%
CTTCACACAGAGTGGGCAAG+AGG - chr7_4:38064366-38064385 None:intergenic 55.0%
CAAAGAGTGACAGCCAGACC+AGG - chr7_4:38064652-38064671 None:intergenic 55.0%
CCCCTTCCCAGGAAACCGAA+GGG - chr7_4:38058540-38058559 None:intergenic 60.0%
CCCTTCGGTTTCCTGGGAAG+GGG + chr7_4:38058537-38058556 Msa1152430:intron 60.0%
TCCTTGAGGGCCAAAAGCGG+TGG + chr7_4:38060476-38060495 Msa1152430:CDS 60.0%
!! TCCACCGCTTTTGGCCCTCA+AGG - chr7_4:38060480-38060499 None:intergenic 60.0%
GAGGGCCAAAAGCGGTGGAT+AGG + chr7_4:38060481-38060500 Msa1152430:CDS 60.0%
! ACCCCGGGTCATGCTAGCTT+GGG + chr7_4:38062474-38062493 Msa1152430:CDS 60.0%
TCCCAAGCTAGCATGACCCG+GGG - chr7_4:38062478-38062497 None:intergenic 60.0%
GCCCCTTCCCAGGAAACCGA+AGG - chr7_4:38058541-38058560 None:intergenic 65.0%
GACCCCGGGTCATGCTAGCT+TGG + chr7_4:38062473-38062492 Msa1152430:CDS 65.0%
TTCCTGGGAAGGGGCCCCCC+TGG + chr7_4:38058546-38058565 Msa1152430:intron 75.0%
! CACCAGGGGGGCCCCTTCCC+AGG - chr7_4:38058551-38058570 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 38057588 38065641 38057588 ID=Msa1152430;Name=Msa1152430
chr7_4 mRNA 38057588 38065641 38057588 ID=Msa1152430-mRNA-1;Parent=Msa1152430;Name=Msa1152430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=153|0.91|0.92|1|1|1|13|1560|418
chr7_4 exon 38057588 38057762 38057588 ID=Msa1152430-mRNA-1:exon:9043;Parent=Msa1152430-mRNA-1
chr7_4 exon 38057963 38058061 38057963 ID=Msa1152430-mRNA-1:exon:9044;Parent=Msa1152430-mRNA-1
chr7_4 exon 38059139 38059200 38059139 ID=Msa1152430-mRNA-1:exon:9045;Parent=Msa1152430-mRNA-1
chr7_4 exon 38059742 38059819 38059742 ID=Msa1152430-mRNA-1:exon:9046;Parent=Msa1152430-mRNA-1
chr7_4 exon 38059901 38060024 38059901 ID=Msa1152430-mRNA-1:exon:9047;Parent=Msa1152430-mRNA-1
chr7_4 exon 38060116 38060189 38060116 ID=Msa1152430-mRNA-1:exon:9048;Parent=Msa1152430-mRNA-1
chr7_4 exon 38060275 38060334 38060275 ID=Msa1152430-mRNA-1:exon:9049;Parent=Msa1152430-mRNA-1
chr7_4 exon 38060460 38060569 38060460 ID=Msa1152430-mRNA-1:exon:9050;Parent=Msa1152430-mRNA-1
chr7_4 exon 38061234 38061393 38061234 ID=Msa1152430-mRNA-1:exon:9051;Parent=Msa1152430-mRNA-1
chr7_4 exon 38061998 38062074 38061998 ID=Msa1152430-mRNA-1:exon:9052;Parent=Msa1152430-mRNA-1
chr7_4 exon 38062329 38062500 38062329 ID=Msa1152430-mRNA-1:exon:9053;Parent=Msa1152430-mRNA-1
chr7_4 exon 38062814 38062906 38062814 ID=Msa1152430-mRNA-1:exon:9054;Parent=Msa1152430-mRNA-1
chr7_4 exon 38063956 38065641 38063956 ID=Msa1152430-mRNA-1:exon:9055;Parent=Msa1152430-mRNA-1
chr7_4 five_prime_UTR 38057588 38057740 38057588 ID=Msa1152430-mRNA-1:five_prime_utr;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38057741 38057762 38057741 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38057963 38058061 38057963 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38059139 38059200 38059139 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38059742 38059819 38059742 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38059901 38060024 38059901 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38060116 38060189 38060116 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38060275 38060334 38060275 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38060460 38060569 38060460 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38061234 38061393 38061234 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38061998 38062074 38061998 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38062329 38062500 38062329 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38062814 38062906 38062814 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 CDS 38063956 38064081 38063956 ID=Msa1152430-mRNA-1:cds;Parent=Msa1152430-mRNA-1
chr7_4 three_prime_UTR 38064082 38065641 38064082 ID=Msa1152430-mRNA-1:three_prime_utr;Parent=Msa1152430-mRNA-1
Gene Sequence

>Msa1152430

ATGACTCGTTCCAATCCACAAGATAAAATTGGAAACATGCCTTCATATTTTGATTTGCCACCACTTGATGTTTCTCTTGCATTTCCACAAGCAACTCCAGCCTCTACTTTTCCTCCTTGTGCTTCAGATTATTTTCAATTCGATGACTTGTTGAAACCAGAGGAGCAGGCTATTAGGATGAAATATTGGGAGAAAGCCGAATTCCCATTTCATGCTATTCCAAAGCTTGGTGAACTGGGTATTGCTGGTGGTACAATCAAGGGTTATGGTTGTCCTGGTCTTTCCGTTACTGGAAGTGCTATCGCTACAGCAGAAGTTGCTAGAGTTGATGCAAGTTGTTCAACTTTCATTTTGGTCCATTCATCCTTGGCAATGCTCACTATAGCATTGTGTGGGTCTGAAGCTCAGAAGCAAAAGTATCTACCGTCGTTGGCACAGCTAAAAACTATAGCATGTTGGGCCTTGACTGAACCTGACTATGGAAGTGATGCAAGTGCTTTGAAGACCACAGCAACTAAGGTGGAAGGTGGTTGGATCCTTGAGGGCCAAAAGCGGTGGATAGGAAACAGTACATTTGCTGATTTATTGGTTATCTTCGCAAGGAATACCTCAACAAATCAAATAAATGGATATATCGTAAAAAAGGATGCACCTGGTTTAACTGTCACAAAAATAGAGAATAAAATTGGGCTTAGAATCGTACAAAATGGAGACATTGTTATGAGGAAAGTTTTTGTCCCTGATGAGGACAGAATTGAAGGAGTCAATTCTTTTCAGGATACAAACAAGGTACTTGCTGTTTCGCGTGTGATGGTTGCTTGGCAACCTATTGGTATATCAATGGGCATCTATGATATGTGTCACAGGTACCTAAAGGAGAGGAAACAATTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTTCAAATGCTCAGTAACGTTCAAGCGATGATTCTTGTTGGTTGGCGTCTATGCAAGTTGTATGAAAGTGGTAAAATGACCCCGGGTCATGCTAGCTTGGGAAAGTCATGGATTACCTTGAGGGCAAGAGAAACAGCTGCTTTGGGGCGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTAGTGGCTAAGGCATTCTGTGACTTAGAACCTATCTACACCTACGAAGGCACGTATGAAATCAATACTTTGGTCACAGGAAGAGAAGTTACTGGTTTTGCCAGCTTTAAGCCAGCTATTCAAAGAAGTAGAATGTGA
Protein sequence

>Msa1152430

MTRSNPQDKIGNMPSYFDLPPLDVSLAFPQATPASTFPPCASDYFQFDDLLKPEEQAIRMKYWEKAEFPFHAIPKLGELGIAGGTIKGYGCPGLSVTGSAIATAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLKTIACWALTEPDYGSDASALKTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNTSTNQINGYIVKKDAPGLTVTKIENKIGLRIVQNGDIVMRKVFVPDEDRIEGVNSFQDTNKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLSNVQAMILVGWRLCKLYESGKMTPGHASLGKSWITLRARETAALGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYEINTLVTGREVTGFASFKPAIQRSRM*