Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176700 | XP_013444624.1 | 96.644 | 596 | 20 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176700 | sp|Q9ZPY9|P4KG4_ARATH | 58.151 | 595 | 208 | 9 | 1 | 588 | 1 | 561 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa1176700 | 0.835260 | 1.861288e-56 | -8.615850e-47 |
| Msa0095360 | Msa1176700 | 0.800191 | 1.618446e-48 | -8.615850e-47 |
| Msa0111080 | Msa1176700 | 0.838562 | 2.671302e-57 | -8.615850e-47 |
| Msa0154920 | Msa1176700 | 0.821244 | 4.476718e-53 | -8.615850e-47 |
| Msa0243320 | Msa1176700 | 0.808797 | 2.595738e-50 | -8.615850e-47 |
| Msa1176700 | Msa1197070 | 0.845286 | 4.465119e-59 | -8.615850e-47 |
| Msa1176700 | Msa1205850 | 0.806050 | 9.928161e-50 | -8.615850e-47 |
| Msa1176700 | Msa1206650 | 0.809177 | 2.152679e-50 | -8.615850e-47 |
| Msa0870650 | Msa1176700 | 0.807176 | 5.742951e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176700 | MtrunA17_Chr8g0346901 | 96.644 | 596 | 20 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1200 |
| Msa1176700 | MtrunA17_Chr7g0275661 | 70.519 | 597 | 162 | 5 | 1 | 590 | 1 | 590 | 0.0 | 834 |
| Msa1176700 | MtrunA17_Chr8g0388301 | 57.895 | 570 | 224 | 8 | 36 | 591 | 25 | 592 | 0.0 | 657 |
| Msa1176700 | MtrunA17_Chr3g0126781 | 58.070 | 570 | 215 | 6 | 30 | 588 | 19 | 575 | 0.0 | 654 |
| Msa1176700 | MtrunA17_Chr5g0396531 | 54.908 | 601 | 241 | 10 | 1 | 591 | 1 | 581 | 0.0 | 645 |
| Msa1176700 | MtrunA17_Chr8g0366091 | 40.411 | 292 | 144 | 7 | 270 | 547 | 150 | 425 | 3.58e-62 | 217 |
| Msa1176700 | MtrunA17_Chr7g0255481 | 38.816 | 304 | 158 | 7 | 258 | 547 | 76 | 365 | 1.76e-58 | 202 |
| Msa1176700 | MtrunA17_Chr5g0420771 | 39.731 | 297 | 141 | 8 | 269 | 547 | 155 | 431 | 6.26e-58 | 205 |
| Msa1176700 | MtrunA17_Chr7g0220391 | 39.236 | 288 | 142 | 7 | 277 | 547 | 155 | 426 | 2.90e-55 | 197 |
| Msa1176700 | MtrunA17_Chr1g0181441 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.37e-16 | 79.3 |
| Msa1176700 | MtrunA17_Chr1g0181441 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 4.79e-16 | 77.8 |
| Msa1176700 | MtrunA17_Chr7g0274921 | 32.544 | 169 | 102 | 6 | 26 | 189 | 67 | 228 | 1.44e-16 | 79.3 |
| Msa1176700 | MtrunA17_Chr7g0274921 | 34.615 | 156 | 90 | 6 | 38 | 189 | 5 | 152 | 4.66e-16 | 77.8 |
| Msa1176700 | MtrunA17_Chr4g0041751 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.71e-16 | 78.2 |
| Msa1176700 | MtrunA17_Chr4g0041751 | 34.266 | 143 | 89 | 4 | 26 | 166 | 65 | 204 | 3.75e-11 | 63.5 |
| Msa1176700 | MtrunA17_Chr6g0475961 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 6.08e-16 | 76.6 |
| Msa1176700 | MtrunA17_Chr6g0475961 | 35.537 | 121 | 75 | 3 | 28 | 146 | 70 | 189 | 4.88e-12 | 65.5 |
| Msa1176700 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 73 | 234 | 9.64e-16 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 149 | 310 | 9.64e-16 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 225 | 386 | 9.64e-16 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0377821 | 34.615 | 156 | 90 | 6 | 38 | 189 | 11 | 158 | 3.26e-15 | 77.8 |
| Msa1176700 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.39e-15 | 79.7 |
| Msa1176700 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.39e-15 | 79.7 |
| Msa1176700 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 1.39e-15 | 79.7 |
| Msa1176700 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 296 | 457 | 1.39e-15 | 79.7 |
| Msa1176700 | MtrunA17_Chr4g0046801 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 4.28e-15 | 78.2 |
| Msa1176700 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 69 | 230 | 1.49e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 145 | 306 | 1.49e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 221 | 382 | 1.49e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 297 | 458 | 1.49e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041641 | 34.615 | 156 | 90 | 6 | 38 | 189 | 7 | 154 | 4.49e-15 | 77.8 |
| Msa1176700 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 1.59e-15 | 79.7 |
| Msa1176700 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.94e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.94e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 372 | 533 | 1.94e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0048591 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 5.67e-15 | 77.8 |
| Msa1176700 | MtrunA17_Chr4g0048591 | 31.953 | 169 | 103 | 6 | 26 | 189 | 296 | 457 | 1.81e-14 | 76.3 |
| Msa1176700 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 2.03e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 2.03e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 2.03e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 369 | 530 | 2.03e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0041701 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.26e-15 | 77.8 |
| Msa1176700 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 2.12e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 2.12e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 2.12e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 296 | 457 | 2.12e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 372 | 533 | 2.12e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr8g0342711 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 6.41e-15 | 77.8 |
| Msa1176700 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 2.55e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 2.55e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 356 | 517 | 2.55e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 432 | 593 | 2.55e-15 | 79.3 |
| Msa1176700 | MtrunA17_Chr4g0046831 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 7.53e-15 | 77.8 |
| Msa1176700 | MtrunA17_Chr4g0037241 | 34.437 | 151 | 87 | 6 | 38 | 184 | 3 | 145 | 2.75e-14 | 70.9 |
| Msa1176700 | MtrunA17_Chr5g0444101 | 34.437 | 151 | 87 | 6 | 38 | 184 | 3 | 145 | 2.75e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176700 | AT2G46500.1 | 58.151 | 595 | 208 | 9 | 1 | 588 | 1 | 561 | 0.0 | 681 |
| Msa1176700 | AT2G46500.2 | 58.151 | 595 | 208 | 9 | 1 | 588 | 1 | 561 | 0.0 | 681 |
| Msa1176700 | AT5G24240.1 | 54.892 | 603 | 233 | 12 | 1 | 593 | 1 | 574 | 0.0 | 627 |
| Msa1176700 | AT5G24240.2 | 54.892 | 603 | 233 | 12 | 1 | 593 | 1 | 574 | 0.0 | 627 |
| Msa1176700 | AT2G46500.3 | 53.882 | 425 | 156 | 8 | 1 | 418 | 1 | 392 | 2.74e-144 | 424 |
| Msa1176700 | AT2G03890.1 | 41.000 | 300 | 144 | 8 | 265 | 547 | 150 | 433 | 6.22e-61 | 214 |
| Msa1176700 | AT1G13640.1 | 40.741 | 297 | 139 | 7 | 272 | 547 | 149 | 429 | 1.59e-60 | 212 |
| Msa1176700 | AT1G13640.2 | 40.741 | 297 | 139 | 7 | 272 | 547 | 149 | 429 | 1.59e-60 | 212 |
| Msa1176700 | AT1G26270.1 | 38.333 | 300 | 152 | 7 | 265 | 547 | 146 | 429 | 1.37e-56 | 201 |
| Msa1176700 | AT2G40850.1 | 38.636 | 308 | 161 | 6 | 280 | 572 | 120 | 414 | 1.37e-55 | 197 |
| Msa1176700 | AT3G56600.2 | 38.796 | 299 | 153 | 7 | 280 | 562 | 100 | 384 | 2.75e-54 | 193 |
| Msa1176700 | AT3G56600.1 | 38.796 | 299 | 153 | 7 | 280 | 562 | 103 | 387 | 2.79e-54 | 193 |
| Msa1176700 | AT3G56600.3 | 38.796 | 299 | 153 | 7 | 280 | 562 | 103 | 387 | 2.79e-54 | 193 |
| Msa1176700 | AT2G03890.2 | 42.174 | 230 | 102 | 6 | 334 | 547 | 99 | 313 | 9.45e-48 | 175 |
| Msa1176700 | AT1G27570.1 | 32.227 | 211 | 125 | 5 | 344 | 543 | 396 | 599 | 5.26e-25 | 110 |
| Msa1176700 | AT1G27570.2 | 32.212 | 208 | 123 | 5 | 347 | 543 | 390 | 590 | 5.90e-25 | 110 |
| Msa1176700 | AT4G02890.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-16 | 79.3 |
| Msa1176700 | AT4G02890.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.50e-16 | 77.8 |
| Msa1176700 | AT4G02890.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-16 | 79.3 |
| Msa1176700 | AT4G02890.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.50e-16 | 77.8 |
| Msa1176700 | AT4G05050.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-16 | 79.3 |
| Msa1176700 | AT4G05050.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.50e-16 | 77.8 |
| Msa1176700 | AT4G05050.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-16 | 79.3 |
| Msa1176700 | AT4G05050.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.50e-16 | 77.8 |
| Msa1176700 | AT4G05050.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-16 | 79.3 |
| Msa1176700 | AT4G05050.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.50e-16 | 77.8 |
| Msa1176700 | AT4G05320.7 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.26e-16 | 77.0 |
| Msa1176700 | AT4G05050.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.26e-16 | 77.0 |
| Msa1176700 | AT5G03240.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G03240.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G03240.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.85e-15 | 78.2 |
| Msa1176700 | AT5G03240.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G03240.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G03240.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.85e-15 | 78.2 |
| Msa1176700 | AT5G03240.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G03240.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G03240.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.85e-15 | 78.2 |
| Msa1176700 | AT5G20620.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G20620.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 5.82e-16 | 79.3 |
| Msa1176700 | AT5G20620.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.85e-15 | 78.2 |
| Msa1176700 | AT4G05320.5 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G05320.5 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G05320.5 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.99e-15 | 77.8 |
| Msa1176700 | AT4G05320.8 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G05320.8 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G05320.8 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.99e-15 | 77.8 |
| Msa1176700 | AT4G02890.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G02890.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G02890.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.99e-15 | 77.8 |
| Msa1176700 | AT4G02890.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G02890.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 6.19e-16 | 79.3 |
| Msa1176700 | AT4G02890.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.99e-15 | 77.8 |
| Msa1176700 | AT1G65350.1 | 34.641 | 153 | 93 | 5 | 38 | 189 | 3 | 149 | 8.36e-16 | 79.3 |
| Msa1176700 | AT1G65350.1 | 31.361 | 169 | 103 | 6 | 26 | 189 | 65 | 225 | 4.33e-14 | 73.9 |
| Msa1176700 | AT1G65350.1 | 33.099 | 142 | 90 | 4 | 26 | 165 | 140 | 278 | 2.16e-12 | 68.9 |
| Msa1176700 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.95e-15 | 77.8 |
| Msa1176700 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.6 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.95e-15 | 77.8 |
| Msa1176700 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.26e-15 | 79.3 |
| Msa1176700 | AT4G05320.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.95e-15 | 77.8 |
| Msa1176700 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.33e-15 | 79.3 |
| Msa1176700 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.33e-15 | 79.3 |
| Msa1176700 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.33e-15 | 79.3 |
| Msa1176700 | AT5G20620.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 4.13e-15 | 77.8 |
| Msa1176700 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.32e-15 | 77.8 |
| Msa1176700 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 2.03e-15 | 79.3 |
| Msa1176700 | AT4G05320.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 6.32e-15 | 77.8 |
| Msa1176700 | AT1G55060.1 | 33.333 | 156 | 92 | 6 | 38 | 189 | 79 | 226 | 8.87e-15 | 74.7 |
| Msa1176700 | AT1G55060.1 | 31.788 | 151 | 92 | 5 | 43 | 189 | 7 | 150 | 9.15e-14 | 71.6 |
| Msa1176700 | AT1G31340.1 | 35.099 | 151 | 86 | 6 | 38 | 184 | 3 | 145 | 1.32e-14 | 72.0 |
| Msa1176700 | AT2G35635.1 | 34.459 | 148 | 91 | 5 | 38 | 184 | 3 | 145 | 1.48e-14 | 72.0 |
| Msa1176700 | AT5G37640.1 | 35.461 | 141 | 80 | 5 | 53 | 189 | 19 | 152 | 3.49e-14 | 74.3 |
| Msa1176700 | AT5G37640.1 | 33.333 | 165 | 98 | 6 | 28 | 187 | 69 | 226 | 4.99e-14 | 73.9 |
| Msa1176700 | AT5G37640.1 | 31.361 | 169 | 105 | 6 | 26 | 189 | 143 | 305 | 5.79e-13 | 70.9 |
| Msa1176700 | AT3G09790.2 | 34.532 | 139 | 80 | 5 | 53 | 187 | 19 | 150 | 9.07e-12 | 68.6 |
| Msa1176700 | AT3G09790.2 | 32.692 | 156 | 92 | 6 | 26 | 171 | 67 | 219 | 4.88e-11 | 66.2 |
| Msa1176700 | AT3G09790.1 | 34.532 | 139 | 80 | 5 | 53 | 187 | 19 | 150 | 9.07e-12 | 68.6 |
| Msa1176700 | AT3G09790.1 | 32.692 | 156 | 92 | 6 | 26 | 171 | 67 | 219 | 4.88e-11 | 66.2 |
Find 191 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTAGGTTTGGTCTTC+TGG | 0.077920 | 8_1:-8888557 | Msa1176700:five_prime_UTR |
| TTTACACCAATCACAAAATT+AGG | 0.088539 | 8_1:-8888685 | Msa1176700:five_prime_UTR |
| AATTAAAGCTTAACTATATC+TGG | 0.127212 | 8_1:+8888514 | None:intergenic |
| CGGGAAGGAGTATACCTTTC+AGG | 0.160755 | 8_1:-8887998 | Msa1176700:CDS |
| GGAAGTTGCTGCTTATATTT+TGG | 0.175078 | 8_1:-8887323 | Msa1176700:CDS |
| GTACCTTTGAATGGCTTTAT+TGG | 0.207540 | 8_1:-8886326 | Msa1176700:CDS |
| TTTCGTTTATCTTTCGTATT+CGG | 0.222595 | 8_1:-8888247 | Msa1176700:CDS |
| AGTGGCCGCCGATCATTATT+TGG | 0.232723 | 8_1:-8887289 | Msa1176700:CDS |
| TTCGTTTATCTTTCGTATTC+GGG | 0.235527 | 8_1:-8888246 | Msa1176700:CDS |
| TCTGAAGCTAGTTCAACTTT+AGG | 0.241682 | 8_1:+8887586 | None:intergenic |
| TAATGGAAGTTGTGAGGATA+TGG | 0.244475 | 8_1:-8887146 | Msa1176700:CDS |
| ATTGTAGCATTGGTAGAATT+AGG | 0.247124 | 8_1:-8888454 | Msa1176700:five_prime_UTR |
| AAGGGGAAAGGGTTTGTTAT+TGG | 0.248743 | 8_1:+8888791 | None:intergenic |
| GATGCAGAGGAAGGTGATTA+TGG | 0.260708 | 8_1:-8887721 | Msa1176700:CDS |
| GAGTTGGCCAAGGAGCTTTC+AGG | 0.267673 | 8_1:-8887345 | Msa1176700:CDS |
| TGAAATGAGACATCACTTAT+TGG | 0.271277 | 8_1:-8885738 | Msa1176700:three_prime_UTR |
| CTGAAGCTAGTTCAACTTTA+GGG | 0.274765 | 8_1:+8887587 | None:intergenic |
| AATTCTTTGCTCAAGGATTA+TGG | 0.280190 | 8_1:-8888096 | Msa1176700:CDS |
| GGATGCTATCTCTGAGATTA+TGG | 0.282847 | 8_1:-8886010 | Msa1176700:CDS |
| TCCTGGTAGAGGTCTTATTT+TGG | 0.283272 | 8_1:-8887626 | Msa1176700:CDS |
| ACGATGAGAAATTAAGCTTC+TGG | 0.294300 | 8_1:-8888649 | Msa1176700:five_prime_UTR |
| TTTAACAAAATATCACAAAA+AGG | 0.297736 | 8_1:+8888588 | None:intergenic |
| TTGATTAGGTTTGGTCTTCT+GGG | 0.300503 | 8_1:-8888556 | Msa1176700:five_prime_UTR |
| CACACAACCTCCTGCTGTTC+AGG | 0.306369 | 8_1:+8887907 | None:intergenic |
| TTGAATTCTGCTGTAGGATT+TGG | 0.310275 | 8_1:-8885941 | Msa1176700:three_prime_UTR |
| TGAACTAGCTTCAGAGGTTT+GGG | 0.315716 | 8_1:-8887578 | Msa1176700:CDS |
| TTGAACTAGCTTCAGAGGTT+TGG | 0.321874 | 8_1:-8887579 | Msa1176700:CDS |
| ATTGCCCTTCTGAAGTTTCA+TGG | 0.323760 | 8_1:-8886234 | Msa1176700:CDS |
| TACTTTATGCTCGACTCAAC+AGG | 0.327135 | 8_1:-8887478 | Msa1176700:CDS |
| AACAATTTCTCCCTTGAAAC+AGG | 0.332507 | 8_1:+8888330 | None:intergenic |
| TTACACCAATCACAAAATTA+GGG | 0.337991 | 8_1:-8888684 | Msa1176700:five_prime_UTR |
| TTGTAGCATTGGTAGAATTA+GGG | 0.339829 | 8_1:-8888453 | Msa1176700:five_prime_UTR |
| GCACTTGATTCTGTTCTTCC+TGG | 0.342861 | 8_1:-8886054 | Msa1176700:CDS |
| GAGGGTTTGGCTGCTAAGTT+TGG | 0.346981 | 8_1:-8887193 | Msa1176700:CDS |
| TCATTAAGAATTATAATTGC+TGG | 0.348757 | 8_1:+8885966 | None:intergenic |
| AATTAAGAGTCGTAAATATA+AGG | 0.360600 | 8_1:+8885790 | None:intergenic |
| AGCAGGAGGTTGTGTGTAAC+GGG | 0.363517 | 8_1:-8887900 | Msa1176700:CDS |
| ATTTAACCATCCAGAGGGTT+TGG | 0.373470 | 8_1:-8887206 | Msa1176700:CDS |
| CAAACAACTCTTCTTCTTCT+CGG | 0.382405 | 8_1:-8888733 | Msa1176700:five_prime_UTR |
| GAAATGAGACATCACTTATT+GGG | 0.390314 | 8_1:-8885737 | Msa1176700:three_prime_UTR |
| TGGTGTTCCTCCGACTGTTA+TGG | 0.392395 | 8_1:-8887248 | Msa1176700:CDS |
| TTGAAAGGTGTAAGGATGTT+TGG | 0.396056 | 8_1:-8887975 | Msa1176700:CDS |
| CGATGAGAAATTAAGCTTCT+GGG | 0.403201 | 8_1:-8888648 | Msa1176700:five_prime_UTR |
| ATGATAAACACTACATATGA+TGG | 0.407373 | 8_1:-8887553 | Msa1176700:CDS |
| CAAATGTTCGTGGAGAATAA+TGG | 0.408480 | 8_1:-8887163 | Msa1176700:CDS |
| ACTTTAGGGTTAACAACAAC+CGG | 0.411541 | 8_1:+8887601 | None:intergenic |
| TTGAAGATTGTACCTTTGAA+TGG | 0.413144 | 8_1:-8886335 | Msa1176700:CDS |
| CTGAAAGGTATACTCCTTCC+CGG | 0.413982 | 8_1:+8887999 | None:intergenic |
| TCAATGATCTCTGGAGAGTA+TGG | 0.416964 | 8_1:+8886288 | None:intergenic |
| CACAAAATTAGGGTTTATAG+AGG | 0.417605 | 8_1:-8888674 | Msa1176700:five_prime_UTR |
| CTCAAAATTCAAAGGAATGA+AGG | 0.419509 | 8_1:-8888171 | Msa1176700:CDS |
| TAAGAAACAGATTGCGGAAA+AGG | 0.427549 | 8_1:-8887947 | Msa1176700:CDS |
| CCTTCTGAAGTTTCATGGAT+GGG | 0.429432 | 8_1:-8886229 | Msa1176700:CDS |
| TCAGTGTGAGAACTTGTTCC+GGG | 0.431902 | 8_1:-8888017 | Msa1176700:CDS |
| GGCCATGAGAAAGGATTTGC+TGG | 0.432160 | 8_1:-8887268 | Msa1176700:CDS |
| AGATGGGAATGTATTGCATT+TGG | 0.435724 | 8_1:-8888067 | Msa1176700:CDS |
| TCAGATGCATGGTCGAGATT+CGG | 0.435796 | 8_1:+8886178 | None:intergenic |
| AGTTGGCCAAGGAGCTTTCA+GGG | 0.436183 | 8_1:-8887344 | Msa1176700:CDS |
| TCATTATTTGGCCATGAGAA+AGG | 0.439250 | 8_1:-8887277 | Msa1176700:CDS |
| CCACTCTGAGTCCTGTTTCA+AGG | 0.444085 | 8_1:-8888341 | Msa1176700:CDS |
| AGGCAGTATCCATGATCAAT+TGG | 0.445883 | 8_1:+8886992 | None:intergenic |
| TTTATGTAGTCAATGATCTC+TGG | 0.446436 | 8_1:+8886279 | None:intergenic |
| GTACCCTCTGCAGATCTGAT+TGG | 0.447790 | 8_1:+8887511 | None:intergenic |
| CTTTCAGGTTGAAAGGTGTA+AGG | 0.447803 | 8_1:-8887983 | Msa1176700:CDS |
| ATCAGTGTGAGAACTTGTTC+CGG | 0.450830 | 8_1:-8888018 | Msa1176700:CDS |
| CACTGATTTGTACAGATATG+TGG | 0.453140 | 8_1:-8888484 | Msa1176700:five_prime_UTR |
| AGACATCACTTATTGGGAAA+TGG | 0.453884 | 8_1:-8885731 | Msa1176700:three_prime_UTR |
| AAACAGAAGTTGGTTTGTAA+TGG | 0.457340 | 8_1:-8888138 | Msa1176700:CDS |
| TCCGATGCGTGTGCTACCTT+CGG | 0.458516 | 8_1:-8888214 | Msa1176700:CDS |
| TTAGGCTTCCAATGGCAAAC+GGG | 0.461022 | 8_1:+8886130 | None:intergenic |
| TGTTGTTGGAATTCAAGATT+CGG | 0.463060 | 8_1:+8888763 | None:intergenic |
| CCCTTCTGAAGTTTCATGGA+TGG | 0.463805 | 8_1:-8886230 | Msa1176700:CDS |
| ATGCAGAGGAAGGTGATTAT+GGG | 0.474524 | 8_1:-8887720 | Msa1176700:CDS |
| AATTCAAGATTCGGAAAAGA+AGG | 0.480058 | 8_1:+8888772 | None:intergenic |
| AACTTAGCAGCCAAACCCTC+TGG | 0.480352 | 8_1:+8887196 | None:intergenic |
| CAATATCTTCTTCAGCATCA+AGG | 0.481634 | 8_1:+8886253 | None:intergenic |
| TAGCAAAGAAGATGCGAGAA+AGG | 0.482978 | 8_1:-8887686 | Msa1176700:CDS |
| GGATTACATAATCCATTGGT+TGG | 0.483000 | 8_1:+8888303 | None:intergenic |
| CACTCTGAGTCCTGTTTCAA+GGG | 0.486062 | 8_1:-8888340 | Msa1176700:CDS |
| GCAAATGCAGATAGGCATGC+TGG | 0.489456 | 8_1:-8887064 | Msa1176700:CDS |
| CAACTTCCCTGAAAGCTCCT+TGG | 0.490176 | 8_1:+8887338 | None:intergenic |
| GGGATGACCCCGTTTGCCAT+TGG | 0.492061 | 8_1:-8886138 | Msa1176700:CDS |
| TGGTGATCTCATCAAGGTGC+TGG | 0.493158 | 8_1:+8885986 | None:intergenic |
| TCAAAATTCAAAGGAATGAA+GGG | 0.498227 | 8_1:-8888170 | Msa1176700:CDS |
| ATTAGGCTTCCAATGGCAAA+CGG | 0.498809 | 8_1:+8886129 | None:intergenic |
| TTAGGTTTGGTCTTCTGGGT+TGG | 0.500181 | 8_1:-8888552 | Msa1176700:five_prime_UTR |
| TCAATGACTCTCGGCACATT+AGG | 0.500948 | 8_1:+8886112 | None:intergenic |
| ACATATGATGGGCTAGATAG+TGG | 0.509383 | 8_1:-8887541 | Msa1176700:CDS |
| TGGTTCCTTGCAAATGTTCG+TGG | 0.511177 | 8_1:-8887173 | Msa1176700:CDS |
| AAATATGCGGATGTTAGTAC+AGG | 0.514113 | 8_1:-8887796 | Msa1176700:CDS |
| CAGCAGGAGGTTGTGTGTAA+CGG | 0.517620 | 8_1:-8887901 | Msa1176700:CDS |
| TCGAGAAATGCTCCTGGTAG+AGG | 0.521176 | 8_1:-8887637 | Msa1176700:CDS |
| AGTGCATAAAATTACTGTGC+TGG | 0.522419 | 8_1:-8887098 | Msa1176700:CDS |
| ATTAAAGCTTAACTATATCT+GGG | 0.522718 | 8_1:+8888515 | None:intergenic |
| TGAGACTTGCAAATGCAGAT+AGG | 0.524034 | 8_1:-8887072 | Msa1176700:CDS |
| GCGTAGCAATTCTTTGCTCA+AGG | 0.525188 | 8_1:-8888103 | Msa1176700:CDS |
| ACAAGGAGTCTGTGATTGAA+GGG | 0.526200 | 8_1:-8886089 | Msa1176700:CDS |
| GGTGACAAACAAACAGAAGT+TGG | 0.531086 | 8_1:-8888148 | Msa1176700:CDS |
| AAGGATTATGGAGTTACAGA+TGG | 0.532645 | 8_1:-8888084 | Msa1176700:CDS |
| AACAAGGAGTCTGTGATTGA+AGG | 0.533373 | 8_1:-8886090 | Msa1176700:CDS |
| AACGACAAAGGTAAACCTCT+AGG | 0.535148 | 8_1:+8887397 | None:intergenic |
| GTTTGCTGATCCTGAACAGC+AGG | 0.535234 | 8_1:-8887917 | Msa1176700:CDS |
| ATCAGATCTGCAGAGGGTAC+AGG | 0.535943 | 8_1:-8887508 | Msa1176700:CDS |
| TGATCTCTGGAGAGTATGGC+TGG | 0.536526 | 8_1:+8886292 | None:intergenic |
| AGTATACCTTTCAGGTTGAA+AGG | 0.537419 | 8_1:-8887990 | Msa1176700:CDS |
| TAAAGTTGAACTAGCTTCAG+AGG | 0.543230 | 8_1:-8887584 | Msa1176700:CDS |
| AATGGAAGTTGTGAGGATAT+GGG | 0.547910 | 8_1:-8887145 | Msa1176700:CDS |
| ATGAAGTTGAATTCTGCTGT+AGG | 0.549468 | 8_1:-8885947 | Msa1176700:three_prime_UTR |
| TCTCGACATAATCCGTTCGA+TGG | 0.553249 | 8_1:+8887654 | None:intergenic |
| GGTCGAGATTCGGAGAGTGC+GGG | 0.554690 | 8_1:+8886188 | None:intergenic |
| AAATGAAGTGCTTACACTAG+TGG | 0.555410 | 8_1:+8886967 | None:intergenic |
| CTTACACCTTTCAACCTGAA+AGG | 0.556700 | 8_1:+8887984 | None:intergenic |
| TGGCTTTAGAATTGTAGCAT+TGG | 0.556781 | 8_1:-8888464 | Msa1176700:five_prime_UTR |
| AATGAAGTGCTTACACTAGT+GGG | 0.557248 | 8_1:+8886968 | None:intergenic |
| CGGTGAAGCTCAAAATTCAA+AGG | 0.558968 | 8_1:-8888179 | Msa1176700:CDS |
| GAGTATGGCTGGCGAGCTTG+AGG | 0.559426 | 8_1:+8886303 | None:intergenic |
| AATTGCTACGCGACAACTCA+CGG | 0.559922 | 8_1:+8888115 | None:intergenic |
| AATATCTTCTTCAGCATCAA+GGG | 0.561373 | 8_1:+8886254 | None:intergenic |
| AAATTGTTGTCTCCAACCAA+TGG | 0.562278 | 8_1:-8888315 | Msa1176700:CDS |
| TCCTTCACCGGAAAAGCACC+AGG | 0.562505 | 8_1:+8887121 | None:intergenic |
| CAAATGCAGATAGGCATGCT+GGG | 0.565622 | 8_1:-8887063 | Msa1176700:CDS |
| GCCTATGGATGAAGAGCCGA+TGG | 0.567919 | 8_1:-8887431 | Msa1176700:CDS |
| GATTCGGAAAAGAAGGGGAA+AGG | 0.568192 | 8_1:+8888779 | None:intergenic |
| CAGTGGATTACATAATCCAT+TGG | 0.571392 | 8_1:+8888299 | None:intergenic |
| ATTCAAGATTCGGAAAAGAA+GGG | 0.572787 | 8_1:+8888773 | None:intergenic |
| ACGACAAAGGTAAACCTCTA+GGG | 0.574374 | 8_1:+8887398 | None:intergenic |
| GGTTTACCTTTGTCGTTAGA+CGG | 0.574812 | 8_1:-8887391 | Msa1176700:CDS |
| ATTCTCCACGAACATTTGCA+AGG | 0.577079 | 8_1:+8887168 | None:intergenic |
| ATTCGGAAAAGAAGGGGAAA+GGG | 0.577319 | 8_1:+8888780 | None:intergenic |
| CTAGGGTTATTCACAGCCAT+CGG | 0.577439 | 8_1:+8887415 | None:intergenic |
| CATCACTTATTGGGAAATGG+TGG | 0.578323 | 8_1:-8885728 | Msa1176700:three_prime_UTR |
| TGATAAACACTACATATGAT+GGG | 0.578850 | 8_1:-8887552 | Msa1176700:CDS |
| TGGTCGAGATTCGGAGAGTG+CGG | 0.582034 | 8_1:+8886187 | None:intergenic |
| AAGAATTCTGATGCAGAGGA+AGG | 0.583886 | 8_1:-8887730 | Msa1176700:CDS |
| TGTTCTTCCTGGTACTAGTG+AGG | 0.584732 | 8_1:-8886043 | Msa1176700:CDS |
| GAAAGAATGTGTTAAGACCA+AGG | 0.588376 | 8_1:+8885823 | None:intergenic |
| CACCAGCAAATCCTTTCTCA+TGG | 0.593275 | 8_1:+8887266 | None:intergenic |
| AGAGTGCGGGCGCATTCGAG+TGG | 0.593444 | 8_1:+8886201 | None:intergenic |
| CCCATCCATGAAACTTCAGA+AGG | 0.594790 | 8_1:+8886229 | None:intergenic |
| ATCTGCAGAGGGTACAGGTG+GGG | 0.594998 | 8_1:-8887503 | Msa1176700:CDS |
| TTCAAGATTCGGAAAAGAAG+GGG | 0.595412 | 8_1:+8888774 | None:intergenic |
| TCGTTTATCTTTCGTATTCG+GGG | 0.598318 | 8_1:-8888245 | Msa1176700:CDS |
| AGATCTGCAGAGGGTACAGG+TGG | 0.599302 | 8_1:-8887505 | Msa1176700:CDS |
| AAAGTAGCCTCACTAGTACC+AGG | 0.600234 | 8_1:+8886036 | None:intergenic |
| CAGAGGAAGGTGATTATGGG+AGG | 0.601611 | 8_1:-8887717 | Msa1176700:CDS |
| ACTCCTTGTTCAATGACTCT+CGG | 0.601726 | 8_1:+8886103 | None:intergenic |
| ATTGCATTTGGTGATTCGAC+TGG | 0.602103 | 8_1:-8888055 | Msa1176700:CDS |
| AAAGAATGTGTTAAGACCAA+GGG | 0.602876 | 8_1:+8885824 | None:intergenic |
| CAATTGGAATCAAAACAGCC+TGG | 0.604227 | 8_1:+8887008 | None:intergenic |
| TCCGAAGGTAGCACACGCAT+CGG | 0.605294 | 8_1:+8888213 | None:intergenic |
| ACCGACTCAATTGTATCCGA+AGG | 0.605708 | 8_1:+8888198 | None:intergenic |
| TGCTGATCCTGAACAGCAGG+AGG | 0.606146 | 8_1:-8887914 | Msa1176700:CDS |
| TACGAAGAATTCTGATGCAG+AGG | 0.606169 | 8_1:-8887734 | Msa1176700:CDS |
| TTCTCCAATCAGATCTGCAG+AGG | 0.606887 | 8_1:-8887515 | Msa1176700:CDS |
| TCTCATGGCCAAATAATGAT+CGG | 0.609397 | 8_1:+8887281 | None:intergenic |
| AATTGCTGGTGATCTCATCA+AGG | 0.609496 | 8_1:+8885980 | None:intergenic |
| AGGATTATGGAGTTACAGAT+GGG | 0.611913 | 8_1:-8888083 | Msa1176700:CDS |
| GCCATCGGCTCTTCATCCAT+AGG | 0.614196 | 8_1:+8887430 | None:intergenic |
| TCCAAAATAAGACCTCTACC+AGG | 0.616093 | 8_1:+8887625 | None:intergenic |
| AGGCCAATAAAGCCATTCAA+AGG | 0.616797 | 8_1:+8886323 | None:intergenic |
| GGAACAAGTTCTCACACTGA+TGG | 0.618065 | 8_1:+8888020 | None:intergenic |
| CCTTTGTCGTTAGACGGCGA+GGG | 0.621719 | 8_1:-8887385 | Msa1176700:CDS |
| TGTGAGAACTTGTTCCGGGA+AGG | 0.622079 | 8_1:-8888013 | Msa1176700:CDS |
| TCGGCACATTAGGCTTCCAA+TGG | 0.624859 | 8_1:+8886122 | None:intergenic |
| AGGAGTATGAAGCCATCGAA+CGG | 0.625133 | 8_1:-8887666 | Msa1176700:CDS |
| AAAGCATTTAACCATCCAGA+GGG | 0.626201 | 8_1:-8887211 | Msa1176700:CDS |
| ACTTTATGCTCGACTCAACA+GGG | 0.629476 | 8_1:-8887477 | Msa1176700:CDS |
| TAGCAGCCAAACCCTCTGGA+TGG | 0.631866 | 8_1:+8887200 | None:intergenic |
| GTAATGGGTAATGACTCCCT+TGG | 0.634850 | 8_1:-8885840 | Msa1176700:three_prime_UTR |
| GTATGTTAAGAAACAGATTG+CGG | 0.640425 | 8_1:-8887953 | Msa1176700:CDS |
| CAAAATTCAAAGGAATGAAG+GGG | 0.640906 | 8_1:-8888169 | Msa1176700:CDS |
| AAGGGTACAAGAGTTGGCCA+AGG | 0.641585 | 8_1:-8887355 | Msa1176700:CDS |
| AAGCACTTTGCCATAACAGT+CGG | 0.642352 | 8_1:+8887238 | None:intergenic |
| ACCTTCGGATACAATTGAGT+CGG | 0.646170 | 8_1:-8888199 | Msa1176700:CDS |
| GGAGAATAATGGAAGTTGTG+AGG | 0.648120 | 8_1:-8887152 | Msa1176700:CDS |
| TCTCCAATCAGATCTGCAGA+GGG | 0.648500 | 8_1:-8887514 | Msa1176700:CDS |
| GTGCCGAGAGTCATTGAACA+AGG | 0.649329 | 8_1:-8886106 | Msa1176700:CDS |
| ATTATGTCGAGAAATGCTCC+TGG | 0.652932 | 8_1:-8887643 | Msa1176700:CDS |
| AAGTGCTTACACTAGTGGGA+AGG | 0.656001 | 8_1:+8886972 | None:intergenic |
| GATCTGCAGAGGGTACAGGT+GGG | 0.656279 | 8_1:-8887504 | Msa1176700:CDS |
| AGTTGTGAGGATATGGGACC+TGG | 0.656793 | 8_1:-8887139 | Msa1176700:CDS |
| CACTTTGCCATAACAGTCGG+AGG | 0.659075 | 8_1:+8887241 | None:intergenic |
| TAGGCTTCCAATGGCAAACG+GGG | 0.663646 | 8_1:+8886131 | None:intergenic |
| CCATCCATGAAACTTCAGAA+GGG | 0.666106 | 8_1:+8886230 | None:intergenic |
| CAAAGCATTTAACCATCCAG+AGG | 0.671281 | 8_1:-8887212 | Msa1176700:CDS |
| AGATTCGAAGACAAGTGCAG+TGG | 0.674817 | 8_1:+8888282 | None:intergenic |
| CCTTGAAACAGGACTCAGAG+TGG | 0.679484 | 8_1:+8888341 | None:intergenic |
| CATGGCCAAATAATGATCGG+CGG | 0.694496 | 8_1:+8887284 | None:intergenic |
| AATATGCGGATGTTAGTACA+GGG | 0.697062 | 8_1:-8887795 | Msa1176700:CDS |
| GCAGGAGGTTGTGTGTAACG+GGG | 0.717392 | 8_1:-8887899 | Msa1176700:CDS |
| ATGGCTGTGAATAACCCTAG+AGG | 0.736670 | 8_1:-8887412 | Msa1176700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAATTTGATTTTGATT+AGG | - | chr8_1:8885977-8885996 | Msa1176700:CDS | 10.0% |
| !!! | AAAGTTAAACATTATTTTAT+TGG | - | chr8_1:8888036-8888055 | Msa1176700:CDS | 10.0% |
| !! | TTTAACAAAATATCACAAAA+AGG | + | chr8_1:8885962-8885981 | None:intergenic | 15.0% |
| !! | AATAAAAGTTGTAATATTTG+AGG | - | chr8_1:8887772-8887791 | Msa1176700:CDS | 15.0% |
| !! | AAAAAAAAAAAGACAATCAT+TGG | + | chr8_1:8888673-8888692 | None:intergenic | 15.0% |
| !!! | AACAATCTTTTTGATTGAAA+AGG | + | chr8_1:8885939-8885958 | None:intergenic | 20.0% |
| !!! | AATTTGATTTTGATTAGGTT+TGG | - | chr8_1:8885982-8886001 | Msa1176700:CDS | 20.0% |
| !! | ATTAAAGCTTAACTATATCT+GGG | + | chr8_1:8886035-8886054 | None:intergenic | 20.0% |
| !! | AATTAAAGCTTAACTATATC+TGG | + | chr8_1:8886036-8886055 | None:intergenic | 20.0% |
| !! | CAAATTCAATGAAAAACTAA+AGG | + | chr8_1:8886141-8886160 | None:intergenic | 20.0% |
| !!! | TTTTGTTAGAACAAAATATG+CGG | - | chr8_1:8886738-8886757 | Msa1176700:intron | 20.0% |
| !!! | GTTAAACATTATTTTATTGG+TGG | - | chr8_1:8888039-8888058 | Msa1176700:CDS | 20.0% |
| !! | TCATTAAGAATTATAATTGC+TGG | + | chr8_1:8888584-8888603 | None:intergenic | 20.0% |
| !!! | TTTAATTGTTTTCACAGTAA+TGG | - | chr8_1:8888691-8888710 | Msa1176700:five_prime_UTR | 20.0% |
| !!! | TTAATTGTTTTCACAGTAAT+GGG | - | chr8_1:8888692-8888711 | Msa1176700:five_prime_UTR | 20.0% |
| !! | AATTAAGAGTCGTAAATATA+AGG | + | chr8_1:8888760-8888779 | None:intergenic | 20.0% |
| ! | TTTACACCAATCACAAAATT+AGG | - | chr8_1:8885862-8885881 | Msa1176700:three_prime_UTR | 25.0% |
| ! | TTACACCAATCACAAAATTA+GGG | - | chr8_1:8885863-8885882 | Msa1176700:three_prime_UTR | 25.0% |
| !! | ATAAACCCTAATTTTGTGAT+TGG | + | chr8_1:8885871-8885890 | None:intergenic | 25.0% |
| ! | TTTCGTTTATCTTTCGTATT+CGG | - | chr8_1:8886300-8886319 | Msa1176700:CDS | 25.0% |
| ! | TCAAAATTCAAAGGAATGAA+GGG | - | chr8_1:8886377-8886396 | Msa1176700:intron | 25.0% |
| ! | ATGATAAACACTACATATGA+TGG | - | chr8_1:8886994-8887013 | Msa1176700:CDS | 25.0% |
| ! | TGATAAACACTACATATGAT+GGG | - | chr8_1:8886995-8887014 | Msa1176700:CDS | 25.0% |
| ! | TAAGTAGTTATAACCAAACA+AGG | + | chr8_1:8887676-8887695 | None:intergenic | 25.0% |
| ! | ATAACTACTTAATCAGTTGT+AGG | - | chr8_1:8887685-8887704 | Msa1176700:CDS | 25.0% |
| ! | AATCTGAAAAACATTCCAAA+AGG | + | chr8_1:8887801-8887820 | None:intergenic | 25.0% |
| ! | TAACACCAGAATTAATGATT+TGG | - | chr8_1:8887946-8887965 | Msa1176700:CDS | 25.0% |
| ! | TCTATCCAAATCATTAATTC+TGG | + | chr8_1:8887954-8887973 | None:intergenic | 25.0% |
| ! | TGAAATTTCTCTCTCGTTTT+TGG | - | chr8_1:8885720-8885739 | Msa1176700:three_prime_UTR | 30.0% |
| ATTCAAGATTCGGAAAAGAA+GGG | + | chr8_1:8885777-8885796 | None:intergenic | 30.0% | |
| AATTCAAGATTCGGAAAAGA+AGG | + | chr8_1:8885778-8885797 | None:intergenic | 30.0% | |
| TGTTGTTGGAATTCAAGATT+CGG | + | chr8_1:8885787-8885806 | None:intergenic | 30.0% | |
| !! | TTGTTTGTTGTTGTTGTTGT+TGG | + | chr8_1:8885801-8885820 | None:intergenic | 30.0% |
| CACAAAATTAGGGTTTATAG+AGG | - | chr8_1:8885873-8885892 | Msa1176700:three_prime_UTR | 30.0% | |
| !! | ATTGTAGCATTGGTAGAATT+AGG | - | chr8_1:8886093-8886112 | Msa1176700:CDS | 30.0% |
| !! | TTGTAGCATTGGTAGAATTA+GGG | - | chr8_1:8886094-8886113 | Msa1176700:CDS | 30.0% |
| !!! | TTGGTAGAATTAGGGTTTTT+TGG | - | chr8_1:8886102-8886121 | Msa1176700:CDS | 30.0% |
| TTCGTTTATCTTTCGTATTC+GGG | - | chr8_1:8886301-8886320 | Msa1176700:CDS | 30.0% | |
| CTCAAAATTCAAAGGAATGA+AGG | - | chr8_1:8886376-8886395 | Msa1176700:intron | 30.0% | |
| CAAAATTCAAAGGAATGAAG+GGG | - | chr8_1:8886378-8886397 | Msa1176700:intron | 30.0% | |
| !! | AAACAGAAGTTGGTTTGTAA+TGG | - | chr8_1:8886409-8886428 | Msa1176700:intron | 30.0% |
| AATTCTTTGCTCAAGGATTA+TGG | - | chr8_1:8886451-8886470 | Msa1176700:intron | 30.0% | |
| GTATGTTAAGAAACAGATTG+CGG | - | chr8_1:8886594-8886613 | Msa1176700:intron | 30.0% | |
| AACAGGGCAAAAATATGTAT+CGG | - | chr8_1:8887086-8887105 | Msa1176700:CDS | 30.0% | |
| ! | TTAAAAAAGGGTACAAGAGT+TGG | - | chr8_1:8887186-8887205 | Msa1176700:CDS | 30.0% |
| !!! | GTTTTGATTCCAATTGATCA+TGG | - | chr8_1:8887546-8887565 | Msa1176700:CDS | 30.0% |
| !!! | AACTTTTGTTTTGCCTTGTT+TGG | - | chr8_1:8887660-8887679 | Msa1176700:CDS | 30.0% |
| CTCTTCTTTAACAATGCTTA+TGG | - | chr8_1:8887720-8887739 | Msa1176700:CDS | 30.0% | |
| TATGAGTGTGTAATGTAATC+TGG | - | chr8_1:8887828-8887847 | Msa1176700:CDS | 30.0% | |
| !! | AATGTAATCTGGAGTGTTTT+TGG | - | chr8_1:8887839-8887858 | Msa1176700:CDS | 30.0% |
| ATGAAGGTAATATCATGCTA+GGG | + | chr8_1:8887875-8887894 | None:intergenic | 30.0% | |
| !! | ACTGCATGTATTTTGAGTAA+TGG | - | chr8_1:8887995-8888014 | Msa1176700:CDS | 30.0% |
| GAGTAATGGCAATTGTAATT+AGG | - | chr8_1:8888009-8888028 | Msa1176700:CDS | 30.0% | |
| GGCATTATTTACCTATTTGA+AGG | - | chr8_1:8888060-8888079 | Msa1176700:CDS | 30.0% | |
| GAATGCAAAATCCTTCAAAT+AGG | + | chr8_1:8888074-8888093 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTCTCTTGATGTTC+AGG | - | chr8_1:8888092-8888111 | Msa1176700:CDS | 30.0% |
| !!! | CTTTTTTCTCTTGATGTTCA+GGG | - | chr8_1:8888093-8888112 | Msa1176700:CDS | 30.0% |
| !!! | TTTTTTCTCTTGATGTTCAG+GGG | - | chr8_1:8888094-8888113 | Msa1176700:CDS | 30.0% |
| CAAAAAAAACCTTGAGTGAT+TGG | + | chr8_1:8888179-8888198 | None:intergenic | 30.0% | |
| TTGAAGATTGTACCTTTGAA+TGG | - | chr8_1:8888212-8888231 | Msa1176700:CDS | 30.0% | |
| TTTATGTAGTCAATGATCTC+TGG | + | chr8_1:8888271-8888290 | None:intergenic | 30.0% | |
| AATATCTTCTTCAGCATCAA+GGG | + | chr8_1:8888296-8888315 | None:intergenic | 30.0% | |
| AAAGAATGTGTTAAGACCAA+GGG | + | chr8_1:8888726-8888745 | None:intergenic | 30.0% | |
| TGAAATGAGACATCACTTAT+TGG | - | chr8_1:8888809-8888828 | Msa1176700:five_prime_UTR | 30.0% | |
| GAAATGAGACATCACTTATT+GGG | - | chr8_1:8888810-8888829 | Msa1176700:five_prime_UTR | 30.0% | |
| TTCAAGATTCGGAAAAGAAG+GGG | + | chr8_1:8885776-8885795 | None:intergenic | 35.0% | |
| CAAACAACTCTTCTTCTTCT+CGG | - | chr8_1:8885814-8885833 | Msa1176700:three_prime_UTR | 35.0% | |
| ACGATGAGAAATTAAGCTTC+TGG | - | chr8_1:8885898-8885917 | Msa1176700:three_prime_UTR | 35.0% | |
| CGATGAGAAATTAAGCTTCT+GGG | - | chr8_1:8885899-8885918 | Msa1176700:three_prime_UTR | 35.0% | |
| ! | TTTGATTAGGTTTGGTCTTC+TGG | - | chr8_1:8885990-8886009 | Msa1176700:CDS | 35.0% |
| ! | TTGATTAGGTTTGGTCTTCT+GGG | - | chr8_1:8885991-8886010 | Msa1176700:CDS | 35.0% |
| !! | CACTGATTTGTACAGATATG+TGG | - | chr8_1:8886063-8886082 | Msa1176700:CDS | 35.0% |
| !! | TGGCTTTAGAATTGTAGCAT+TGG | - | chr8_1:8886083-8886102 | Msa1176700:CDS | 35.0% |
| AACAATTTCTCCCTTGAAAC+AGG | + | chr8_1:8886220-8886239 | None:intergenic | 35.0% | |
| AAATTGTTGTCTCCAACCAA+TGG | - | chr8_1:8886232-8886251 | Msa1176700:CDS | 35.0% | |
| GGATTACATAATCCATTGGT+TGG | + | chr8_1:8886247-8886266 | None:intergenic | 35.0% | |
| !! | CAGTGGATTACATAATCCAT+TGG | + | chr8_1:8886251-8886270 | None:intergenic | 35.0% |
| TCGTTTATCTTTCGTATTCG+GGG | - | chr8_1:8886302-8886321 | Msa1176700:CDS | 35.0% | |
| AAGGATTATGGAGTTACAGA+TGG | - | chr8_1:8886463-8886482 | Msa1176700:intron | 35.0% | |
| AGGATTATGGAGTTACAGAT+GGG | - | chr8_1:8886464-8886483 | Msa1176700:intron | 35.0% | |
| AGATGGGAATGTATTGCATT+TGG | - | chr8_1:8886480-8886499 | Msa1176700:intron | 35.0% | |
| !! | AGTATACCTTTCAGGTTGAA+AGG | - | chr8_1:8886557-8886576 | Msa1176700:intron | 35.0% |
| ! | TTGAAAGGTGTAAGGATGTT+TGG | - | chr8_1:8886572-8886591 | Msa1176700:intron | 35.0% |
| TAAGAAACAGATTGCGGAAA+AGG | - | chr8_1:8886600-8886619 | Msa1176700:intron | 35.0% | |
| AAATATGCGGATGTTAGTAC+AGG | - | chr8_1:8886751-8886770 | Msa1176700:intron | 35.0% | |
| AATATGCGGATGTTAGTACA+GGG | - | chr8_1:8886752-8886771 | Msa1176700:intron | 35.0% | |
| !! | ACTTTAGGGTTAACAACAAC+CGG | + | chr8_1:8886949-8886968 | None:intergenic | 35.0% |
| CTGAAGCTAGTTCAACTTTA+GGG | + | chr8_1:8886963-8886982 | None:intergenic | 35.0% | |
| ! | TCTGAAGCTAGTTCAACTTT+AGG | + | chr8_1:8886964-8886983 | None:intergenic | 35.0% |
| ! | TAAAGTTGAACTAGCTTCAG+AGG | - | chr8_1:8886963-8886982 | Msa1176700:intron | 35.0% |
| !! | GGAAGTTGCTGCTTATATTT+TGG | - | chr8_1:8887224-8887243 | Msa1176700:CDS | 35.0% |
| ! | ATTTTGGATCATCCAATGAG+TGG | - | chr8_1:8887240-8887259 | Msa1176700:CDS | 35.0% |
| TCTCATGGCCAAATAATGAT+CGG | + | chr8_1:8887269-8887288 | None:intergenic | 35.0% | |
| TCATTATTTGGCCATGAGAA+AGG | - | chr8_1:8887270-8887289 | Msa1176700:CDS | 35.0% | |
| ! | AAAGCATTTAACCATCCAGA+GGG | - | chr8_1:8887336-8887355 | Msa1176700:CDS | 35.0% |
| CAAATGTTCGTGGAGAATAA+TGG | - | chr8_1:8887384-8887403 | Msa1176700:CDS | 35.0% | |
| TAATGGAAGTTGTGAGGATA+TGG | - | chr8_1:8887401-8887420 | Msa1176700:CDS | 35.0% | |
| AATGGAAGTTGTGAGGATAT+GGG | - | chr8_1:8887402-8887421 | Msa1176700:CDS | 35.0% | |
| ! | ATTTTATGCACTTCCTTCAC+CGG | + | chr8_1:8887441-8887460 | None:intergenic | 35.0% |
| AGTGCATAAAATTACTGTGC+TGG | - | chr8_1:8887449-8887468 | Msa1176700:CDS | 35.0% | |
| CTTGGCAAAGAGAAGAAAAA+TGG | - | chr8_1:8887516-8887535 | Msa1176700:CDS | 35.0% | |
| ! | AATGAAGTGCTTACACTAGT+GGG | + | chr8_1:8887582-8887601 | None:intergenic | 35.0% |
| ! | AAATGAAGTGCTTACACTAG+TGG | + | chr8_1:8887583-8887602 | None:intergenic | 35.0% |
| !! | TAATATTTGAGGCCTCCTTT+TGG | - | chr8_1:8887783-8887802 | Msa1176700:CDS | 35.0% |
| CTGAAAAACATTCCAAAAGG+AGG | + | chr8_1:8887798-8887817 | None:intergenic | 35.0% | |
| CATGAAGGTAATATCATGCT+AGG | + | chr8_1:8887876-8887895 | None:intergenic | 35.0% | |
| ! | GAGAAAAGTAGCATTGGAAA+AGG | + | chr8_1:8887913-8887932 | None:intergenic | 35.0% |
| AGCAAAGAGAAAAGTAGCAT+TGG | + | chr8_1:8887919-8887938 | None:intergenic | 35.0% | |
| AACTCTAAACCAATCACTCA+AGG | - | chr8_1:8888167-8888186 | Msa1176700:CDS | 35.0% | |
| !! | GTACCTTTGAATGGCTTTAT+TGG | - | chr8_1:8888221-8888240 | Msa1176700:CDS | 35.0% |
| CAATATCTTCTTCAGCATCA+AGG | + | chr8_1:8888297-8888316 | None:intergenic | 35.0% | |
| ATGCATCTGAAAAAAGGAGT+GGG | - | chr8_1:8888382-8888401 | Msa1176700:exon | 35.0% | |
| !!! | TACTAGTGAGGCTACTTTTA+TGG | - | chr8_1:8888516-8888535 | Msa1176700:five_prime_UTR | 35.0% |
| ATGAAGTTGAATTCTGCTGT+AGG | - | chr8_1:8888600-8888619 | Msa1176700:five_prime_UTR | 35.0% | |
| TTGAATTCTGCTGTAGGATT+TGG | - | chr8_1:8888606-8888625 | Msa1176700:five_prime_UTR | 35.0% | |
| GAAAGAATGTGTTAAGACCA+AGG | + | chr8_1:8888727-8888746 | None:intergenic | 35.0% | |
| AGACATCACTTATTGGGAAA+TGG | - | chr8_1:8888816-8888835 | Msa1176700:five_prime_UTR | 35.0% | |
| !! | AAGGGGAAAGGGTTTGTTAT+TGG | + | chr8_1:8885759-8885778 | None:intergenic | 40.0% |
| ATTCGGAAAAGAAGGGGAAA+GGG | + | chr8_1:8885770-8885789 | None:intergenic | 40.0% | |
| AGCTGAAAAATGTCTTCTGC+TGG | - | chr8_1:8886178-8886197 | Msa1176700:CDS | 40.0% | |
| ACCTTCGGATACAATTGAGT+CGG | - | chr8_1:8886348-8886367 | Msa1176700:intron | 40.0% | |
| CGGTGAAGCTCAAAATTCAA+AGG | - | chr8_1:8886368-8886387 | Msa1176700:intron | 40.0% | |
| GGTGACAAACAAACAGAAGT+TGG | - | chr8_1:8886399-8886418 | Msa1176700:intron | 40.0% | |
| ! | ATTGCATTTGGTGATTCGAC+TGG | - | chr8_1:8886492-8886511 | Msa1176700:intron | 40.0% |
| ! | ATCAGTGTGAGAACTTGTTC+CGG | - | chr8_1:8886529-8886548 | Msa1176700:intron | 40.0% |
| CTTACACCTTTCAACCTGAA+AGG | + | chr8_1:8886566-8886585 | None:intergenic | 40.0% | |
| !! | CTTTCAGGTTGAAAGGTGTA+AGG | - | chr8_1:8886564-8886583 | Msa1176700:intron | 40.0% |
| TACGAAGAATTCTGATGCAG+AGG | - | chr8_1:8886813-8886832 | Msa1176700:intron | 40.0% | |
| AAGAATTCTGATGCAGAGGA+AGG | - | chr8_1:8886817-8886836 | Msa1176700:intron | 40.0% | |
| ATGCAGAGGAAGGTGATTAT+GGG | - | chr8_1:8886827-8886846 | Msa1176700:intron | 40.0% | |
| TAGCAAAGAAGATGCGAGAA+AGG | - | chr8_1:8886861-8886880 | Msa1176700:intron | 40.0% | |
| ATTATGTCGAGAAATGCTCC+TGG | - | chr8_1:8886904-8886923 | Msa1176700:intron | 40.0% | |
| !!! | TCCTGGTAGAGGTCTTATTT+TGG | - | chr8_1:8886921-8886940 | Msa1176700:intron | 40.0% |
| TCCAAAATAAGACCTCTACC+AGG | + | chr8_1:8886925-8886944 | None:intergenic | 40.0% | |
| !!! | TAGAGGTCTTATTTTGGAGC+CGG | - | chr8_1:8886927-8886946 | Msa1176700:intron | 40.0% |
| ! | TTGAACTAGCTTCAGAGGTT+TGG | - | chr8_1:8886968-8886987 | Msa1176700:intron | 40.0% |
| ! | TGAACTAGCTTCAGAGGTTT+GGG | - | chr8_1:8886969-8886988 | Msa1176700:intron | 40.0% |
| !! | ACATATGATGGGCTAGATAG+TGG | - | chr8_1:8887006-8887025 | Msa1176700:CDS | 40.0% |
| TACTTTATGCTCGACTCAAC+AGG | - | chr8_1:8887069-8887088 | Msa1176700:CDS | 40.0% | |
| ACTTTATGCTCGACTCAACA+GGG | - | chr8_1:8887070-8887089 | Msa1176700:CDS | 40.0% | |
| !!! | TGTATCGGTTTTCAAGCCTA+TGG | - | chr8_1:8887101-8887120 | Msa1176700:CDS | 40.0% |
| ACGACAAAGGTAAACCTCTA+GGG | + | chr8_1:8887152-8887171 | None:intergenic | 40.0% | |
| AACGACAAAGGTAAACCTCT+AGG | + | chr8_1:8887153-8887172 | None:intergenic | 40.0% | |
| GGTTTACCTTTGTCGTTAGA+CGG | - | chr8_1:8887156-8887175 | Msa1176700:CDS | 40.0% | |
| AAGCACTTTGCCATAACAGT+CGG | + | chr8_1:8887312-8887331 | None:intergenic | 40.0% | |
| ! | CAAAGCATTTAACCATCCAG+AGG | - | chr8_1:8887335-8887354 | Msa1176700:CDS | 40.0% |
| ATTTAACCATCCAGAGGGTT+TGG | - | chr8_1:8887341-8887360 | Msa1176700:CDS | 40.0% | |
| ATTCTCCACGAACATTTGCA+AGG | + | chr8_1:8887382-8887401 | None:intergenic | 40.0% | |
| ! | GGAGAATAATGGAAGTTGTG+AGG | - | chr8_1:8887395-8887414 | Msa1176700:CDS | 40.0% |
| TGAGACTTGCAAATGCAGAT+AGG | - | chr8_1:8887475-8887494 | Msa1176700:CDS | 40.0% | |
| ! | CATGCTGGGAATATTTTGCT+TGG | - | chr8_1:8887498-8887517 | Msa1176700:CDS | 40.0% |
| CAAAGAGAAGAAAAATGGCC+AGG | - | chr8_1:8887521-8887540 | Msa1176700:CDS | 40.0% | |
| CAATTGGAATCAAAACAGCC+TGG | + | chr8_1:8887542-8887561 | None:intergenic | 40.0% | |
| AGGCAGTATCCATGATCAAT+TGG | + | chr8_1:8887558-8887577 | None:intergenic | 40.0% | |
| GAACAATAAAGCAGCATCAC+AGG | + | chr8_1:8887624-8887643 | None:intergenic | 40.0% | |
| GCAAGTCGTTGTAATCATGA+AGG | + | chr8_1:8887891-8887910 | None:intergenic | 40.0% | |
| GTCTTCAAGATTGACAGCTT+TGG | + | chr8_1:8887977-8887996 | None:intergenic | 40.0% | |
| AGGCCAATAAAGCCATTCAA+AGG | + | chr8_1:8888227-8888246 | None:intergenic | 40.0% | |
| ! | TCAATGATCTCTGGAGAGTA+TGG | + | chr8_1:8888262-8888281 | None:intergenic | 40.0% |
| !! | ATTGCCCTTCTGAAGTTTCA+TGG | - | chr8_1:8888313-8888332 | Msa1176700:CDS | 40.0% |
| CCATCCATGAAACTTCAGAA+GGG | + | chr8_1:8888320-8888339 | None:intergenic | 40.0% | |
| !! | CCTTCTGAAGTTTCATGGAT+GGG | - | chr8_1:8888318-8888337 | Msa1176700:CDS | 40.0% |
| TCGACCATGCATCTGAAAAA+AGG | - | chr8_1:8888376-8888395 | Msa1176700:exon | 40.0% | |
| !!! | CACTCCTTTTTTCAGATGCA+TGG | + | chr8_1:8888383-8888402 | None:intergenic | 40.0% |
| CATGCATCTGAAAAAAGGAG+TGG | - | chr8_1:8888381-8888400 | Msa1176700:exon | 40.0% | |
| TGCATCTGAAAAAAGGAGTG+GGG | - | chr8_1:8888383-8888402 | Msa1176700:five_prime_UTR | 40.0% | |
| TGAAAAAAGGAGTGGGGAAA+GGG | - | chr8_1:8888389-8888408 | Msa1176700:five_prime_UTR | 40.0% | |
| ATTAGGCTTCCAATGGCAAA+CGG | + | chr8_1:8888421-8888440 | None:intergenic | 40.0% | |
| ACTCCTTGTTCAATGACTCT+CGG | + | chr8_1:8888447-8888466 | None:intergenic | 40.0% | |
| AACAAGGAGTCTGTGATTGA+AGG | - | chr8_1:8888457-8888476 | Msa1176700:five_prime_UTR | 40.0% | |
| ACAAGGAGTCTGTGATTGAA+GGG | - | chr8_1:8888458-8888477 | Msa1176700:five_prime_UTR | 40.0% | |
| !! | GGATGCTATCTCTGAGATTA+TGG | - | chr8_1:8888537-8888556 | Msa1176700:five_prime_UTR | 40.0% |
| AATTGCTGGTGATCTCATCA+AGG | + | chr8_1:8888570-8888589 | None:intergenic | 40.0% | |
| CATCACTTATTGGGAAATGG+TGG | - | chr8_1:8888819-8888838 | Msa1176700:five_prime_UTR | 40.0% | |
| GATTCGGAAAAGAAGGGGAA+AGG | + | chr8_1:8885771-8885790 | None:intergenic | 45.0% | |
| ! | TTAGGTTTGGTCTTCTGGGT+TGG | - | chr8_1:8885995-8886014 | Msa1176700:CDS | 45.0% |
| CACTCTGAGTCCTGTTTCAA+GGG | - | chr8_1:8886207-8886226 | Msa1176700:CDS | 45.0% | |
| AGATTCGAAGACAAGTGCAG+TGG | + | chr8_1:8886268-8886287 | None:intergenic | 45.0% | |
| ! | ACCGACTCAATTGTATCCGA+AGG | + | chr8_1:8886352-8886371 | None:intergenic | 45.0% |
| AATTGCTACGCGACAACTCA+CGG | + | chr8_1:8886435-8886454 | None:intergenic | 45.0% | |
| GCGTAGCAATTCTTTGCTCA+AGG | - | chr8_1:8886444-8886463 | Msa1176700:intron | 45.0% | |
| GGAACAAGTTCTCACACTGA+TGG | + | chr8_1:8886530-8886549 | None:intergenic | 45.0% | |
| ! | TCAGTGTGAGAACTTGTTCC+GGG | - | chr8_1:8886530-8886549 | Msa1176700:intron | 45.0% |
| ! | CTGAAAGGTATACTCCTTCC+CGG | + | chr8_1:8886551-8886570 | None:intergenic | 45.0% |
| GATGCAGAGGAAGGTGATTA+TGG | - | chr8_1:8886826-8886845 | Msa1176700:intron | 45.0% | |
| ! | AGGAGTATGAAGCCATCGAA+CGG | - | chr8_1:8886881-8886900 | Msa1176700:intron | 45.0% |
| TCTCGACATAATCCGTTCGA+TGG | + | chr8_1:8886896-8886915 | None:intergenic | 45.0% | |
| TTCTCCAATCAGATCTGCAG+AGG | - | chr8_1:8887032-8887051 | Msa1176700:CDS | 45.0% | |
| TCTCCAATCAGATCTGCAGA+GGG | - | chr8_1:8887033-8887052 | Msa1176700:CDS | 45.0% | |
| CTAGGGTTATTCACAGCCAT+CGG | + | chr8_1:8887135-8887154 | None:intergenic | 45.0% | |
| ATGGCTGTGAATAACCCTAG+AGG | - | chr8_1:8887135-8887154 | Msa1176700:CDS | 45.0% | |
| CATGGCCAAATAATGATCGG+CGG | + | chr8_1:8887266-8887285 | None:intergenic | 45.0% | |
| CACCAGCAAATCCTTTCTCA+TGG | + | chr8_1:8887284-8887303 | None:intergenic | 45.0% | |
| TGGTTCCTTGCAAATGTTCG+TGG | - | chr8_1:8887374-8887393 | Msa1176700:CDS | 45.0% | |
| CAAATGCAGATAGGCATGCT+GGG | - | chr8_1:8887484-8887503 | Msa1176700:CDS | 45.0% | |
| AAGTGCTTACACTAGTGGGA+AGG | + | chr8_1:8887578-8887597 | None:intergenic | 45.0% | |
| TTTCTCTTGATGTTCAGGGG+AGG | - | chr8_1:8888097-8888116 | Msa1176700:CDS | 45.0% | |
| !! | CCCTTCTGAAGTTTCATGGA+TGG | - | chr8_1:8888317-8888336 | Msa1176700:CDS | 45.0% |
| CCCATCCATGAAACTTCAGA+AGG | + | chr8_1:8888321-8888340 | None:intergenic | 45.0% | |
| TCAGATGCATGGTCGAGATT+CGG | + | chr8_1:8888372-8888391 | None:intergenic | 45.0% | |
| CTGAAAAAAGGAGTGGGGAA+AGG | - | chr8_1:8888388-8888407 | Msa1176700:five_prime_UTR | 45.0% | |
| TTAGGCTTCCAATGGCAAAC+GGG | + | chr8_1:8888420-8888439 | None:intergenic | 45.0% | |
| TCAATGACTCTCGGCACATT+AGG | + | chr8_1:8888438-8888457 | None:intergenic | 45.0% | |
| GCACTTGATTCTGTTCTTCC+TGG | - | chr8_1:8888493-8888512 | Msa1176700:five_prime_UTR | 45.0% | |
| TGTTCTTCCTGGTACTAGTG+AGG | - | chr8_1:8888504-8888523 | Msa1176700:five_prime_UTR | 45.0% | |
| AAAGTAGCCTCACTAGTACC+AGG | + | chr8_1:8888514-8888533 | None:intergenic | 45.0% | |
| !! | GTAATGGGTAATGACTCCCT+TGG | - | chr8_1:8888707-8888726 | Msa1176700:five_prime_UTR | 45.0% |
| CCTTGAAACAGGACTCAGAG+TGG | + | chr8_1:8886209-8886228 | None:intergenic | 50.0% | |
| CCACTCTGAGTCCTGTTTCA+AGG | - | chr8_1:8886206-8886225 | Msa1176700:CDS | 50.0% | |
| ! | TGTGAGAACTTGTTCCGGGA+AGG | - | chr8_1:8886534-8886553 | Msa1176700:intron | 50.0% |
| ! | CGGGAAGGAGTATACCTTTC+AGG | - | chr8_1:8886549-8886568 | Msa1176700:intron | 50.0% |
| ! | GTTTGCTGATCCTGAACAGC+AGG | - | chr8_1:8886630-8886649 | Msa1176700:intron | 50.0% |
| CAGCAGGAGGTTGTGTGTAA+CGG | - | chr8_1:8886646-8886665 | Msa1176700:intron | 50.0% | |
| AGCAGGAGGTTGTGTGTAAC+GGG | - | chr8_1:8886647-8886666 | Msa1176700:intron | 50.0% | |
| CAGAGGAAGGTGATTATGGG+AGG | - | chr8_1:8886830-8886849 | Msa1176700:intron | 50.0% | |
| TCGAGAAATGCTCCTGGTAG+AGG | - | chr8_1:8886910-8886929 | Msa1176700:intron | 50.0% | |
| GTACCCTCTGCAGATCTGAT+TGG | + | chr8_1:8887039-8887058 | None:intergenic | 50.0% | |
| ! | ATCAGATCTGCAGAGGGTAC+AGG | - | chr8_1:8887039-8887058 | Msa1176700:CDS | 50.0% |
| AGACGGCGAGGGCTTAAAAA+AGG | - | chr8_1:8887173-8887192 | Msa1176700:CDS | 50.0% | |
| GACGGCGAGGGCTTAAAAAA+GGG | - | chr8_1:8887174-8887193 | Msa1176700:CDS | 50.0% | |
| ! | AAGGGTACAAGAGTTGGCCA+AGG | - | chr8_1:8887192-8887211 | Msa1176700:CDS | 50.0% |
| AGTTGGCCAAGGAGCTTTCA+GGG | - | chr8_1:8887203-8887222 | Msa1176700:CDS | 50.0% | |
| CAACTTCCCTGAAAGCTCCT+TGG | + | chr8_1:8887212-8887231 | None:intergenic | 50.0% | |
| AGTGGCCGCCGATCATTATT+TGG | - | chr8_1:8887258-8887277 | Msa1176700:CDS | 50.0% | |
| GGCCATGAGAAAGGATTTGC+TGG | - | chr8_1:8887279-8887298 | Msa1176700:CDS | 50.0% | |
| TGGTGTTCCTCCGACTGTTA+TGG | - | chr8_1:8887299-8887318 | Msa1176700:CDS | 50.0% | |
| CACTTTGCCATAACAGTCGG+AGG | + | chr8_1:8887309-8887328 | None:intergenic | 50.0% | |
| AACTTAGCAGCCAAACCCTC+TGG | + | chr8_1:8887354-8887373 | None:intergenic | 50.0% | |
| GAGGGTTTGGCTGCTAAGTT+TGG | - | chr8_1:8887354-8887373 | Msa1176700:CDS | 50.0% | |
| AGTTGTGAGGATATGGGACC+TGG | - | chr8_1:8887408-8887427 | Msa1176700:CDS | 50.0% | |
| ! | TATGGGACCTGGTGCTTTTC+CGG | - | chr8_1:8887419-8887438 | Msa1176700:CDS | 50.0% |
| GCAAATGCAGATAGGCATGC+TGG | - | chr8_1:8887483-8887502 | Msa1176700:CDS | 50.0% | |
| ! | TGATCTCTGGAGAGTATGGC+TGG | + | chr8_1:8888258-8888277 | None:intergenic | 50.0% |
| TAGGCTTCCAATGGCAAACG+GGG | + | chr8_1:8888419-8888438 | None:intergenic | 50.0% | |
| TCGGCACATTAGGCTTCCAA+TGG | + | chr8_1:8888428-8888447 | None:intergenic | 50.0% | |
| GTGCCGAGAGTCATTGAACA+AGG | - | chr8_1:8888441-8888460 | Msa1176700:five_prime_UTR | 50.0% | |
| TGGTGATCTCATCAAGGTGC+TGG | + | chr8_1:8888564-8888583 | None:intergenic | 50.0% | |
| TCCGATGCGTGTGCTACCTT+CGG | - | chr8_1:8886333-8886352 | Msa1176700:CDS | 55.0% | |
| TCCGAAGGTAGCACACGCAT+CGG | + | chr8_1:8886337-8886356 | None:intergenic | 55.0% | |
| TGCTGATCCTGAACAGCAGG+AGG | - | chr8_1:8886633-8886652 | Msa1176700:intron | 55.0% | |
| CACACAACCTCCTGCTGTTC+AGG | + | chr8_1:8886643-8886662 | None:intergenic | 55.0% | |
| GCAGGAGGTTGTGTGTAACG+GGG | - | chr8_1:8886648-8886667 | Msa1176700:intron | 55.0% | |
| ! | AGATCTGCAGAGGGTACAGG+TGG | - | chr8_1:8887042-8887061 | Msa1176700:CDS | 55.0% |
| ! | GATCTGCAGAGGGTACAGGT+GGG | - | chr8_1:8887043-8887062 | Msa1176700:CDS | 55.0% |
| ! | ATCTGCAGAGGGTACAGGTG+GGG | - | chr8_1:8887044-8887063 | Msa1176700:CDS | 55.0% |
| GCCTATGGATGAAGAGCCGA+TGG | - | chr8_1:8887116-8887135 | Msa1176700:CDS | 55.0% | |
| !! | GCCATCGGCTCTTCATCCAT+AGG | + | chr8_1:8887120-8887139 | None:intergenic | 55.0% |
| ACCTTTGTCGTTAGACGGCG+AGG | - | chr8_1:8887161-8887180 | Msa1176700:CDS | 55.0% | |
| CCTTTGTCGTTAGACGGCGA+GGG | - | chr8_1:8887162-8887181 | Msa1176700:CDS | 55.0% | |
| GAGTTGGCCAAGGAGCTTTC+AGG | - | chr8_1:8887202-8887221 | Msa1176700:CDS | 55.0% | |
| AATGATCGGCGGCCACTCAT+TGG | + | chr8_1:8887255-8887274 | None:intergenic | 55.0% | |
| TAGCAGCCAAACCCTCTGGA+TGG | + | chr8_1:8887350-8887369 | None:intergenic | 55.0% | |
| ! | ACCTGGTGCTTTTCCGGTGA+AGG | - | chr8_1:8887425-8887444 | Msa1176700:CDS | 55.0% |
| !! | TCCTTCACCGGAAAAGCACC+AGG | + | chr8_1:8887429-8887448 | None:intergenic | 55.0% |
| CTCTTGATGTTCAGGGGAGG+AGG | - | chr8_1:8888100-8888119 | Msa1176700:CDS | 55.0% | |
| TGGTCGAGATTCGGAGAGTG+CGG | + | chr8_1:8888363-8888382 | None:intergenic | 55.0% | |
| CCCTCGCCGTCTAACGACAA+AGG | + | chr8_1:8887165-8887184 | None:intergenic | 60.0% | |
| GAGTATGGCTGGCGAGCTTG+AGG | + | chr8_1:8888247-8888266 | None:intergenic | 60.0% | |
| ! | GGTCGAGATTCGGAGAGTGC+GGG | + | chr8_1:8888362-8888381 | None:intergenic | 60.0% |
| GGGATGACCCCGTTTGCCAT+TGG | - | chr8_1:8888409-8888428 | Msa1176700:five_prime_UTR | 60.0% | |
| AGAGTGCGGGCGCATTCGAG+TGG | + | chr8_1:8888349-8888368 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 8885708 | 8888861 | 8885708 | ID=Msa1176700;Name=Msa1176700 |
| chr8_1 | mRNA | 8885708 | 8888861 | 8885708 | ID=Msa1176700-mRNA-1;Parent=Msa1176700;Name=Msa1176700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=479|1|1|1|1|1|2|261|596 |
| chr8_1 | exon | 8885708 | 8886358 | 8885708 | ID=Msa1176700-mRNA-1:exon:2995;Parent=Msa1176700-mRNA-1 |
| chr8_1 | exon | 8886982 | 8888861 | 8886982 | ID=Msa1176700-mRNA-1:exon:2994;Parent=Msa1176700-mRNA-1 |
| chr8_1 | five_prime_UTR | 8888383 | 8888861 | 8888383 | ID=Msa1176700-mRNA-1:five_prime_utr;Parent=Msa1176700-mRNA-1 |
| chr8_1 | CDS | 8886982 | 8888382 | 8886982 | ID=Msa1176700-mRNA-1:cds;Parent=Msa1176700-mRNA-1 |
| chr8_1 | CDS | 8885969 | 8886358 | 8885969 | ID=Msa1176700-mRNA-1:cds;Parent=Msa1176700-mRNA-1 |
| chr8_1 | three_prime_UTR | 8885708 | 8885968 | 8885708 | ID=Msa1176700-mRNA-1:three_prime_utr;Parent=Msa1176700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
