AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0154920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0154920 MtrunA17_Chr1g0169341 98.000 650 13 0 1 650 1 650 0.0 1309
Msa0154920 MtrunA17_Chr7g0274521 56.006 641 247 12 5 631 29 648 0.0 677
Msa0154920 MtrunA17_Chr1g0190281 53.292 638 250 11 5 636 3 598 0.0 627
Msa0154920 MtrunA17_Chr2g0288551 43.582 631 256 11 8 626 26 568 2.25e-163 481
Msa0154920 MtrunA17_Chr1g0169571 61.272 346 132 2 2 346 3 347 1.85e-144 432
Msa0154920 MtrunA17_Chr1g0169571 57.386 176 65 3 474 647 402 569 4.30e-50 183
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0154920 AT1G04780.1 70.977 665 166 13 4 649 6 662 0.0 889
Msa0154920 AT3G24210.1 62.124 631 197 10 1 630 1 590 0.0 744
Msa0154920 AT3G04470.1 52.977 655 225 12 5 631 3 602 0.0 660
Msa0154920 AT1G62050.1 43.451 649 270 14 9 627 18 599 4.77e-163 481
Msa0154920 AT1G11740.1 52.318 302 141 1 9 310 17 315 2.71e-105 333
Msa0154920 AT1G11740.1 47.953 171 61 4 479 628 364 527 2.39e-37 148

Find 200 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCACTTGGCTGTTAAATT+AGG 0.055054 1_4:+19719456 Msa0154920:CDS
AATAAATACAAAAGGGAAAT+TGG 0.200463 1_4:-19718685 None:intergenic
TGCAATTATAGTTGAGTTAA+TGG 0.210169 1_4:-19724241 None:intergenic
TTCACTTGGCTGTTAAATTA+GGG 0.214370 1_4:+19719457 Msa0154920:CDS
CTTCAGACACTTACAAGATT+TGG 0.232931 1_4:+19719751 Msa0154920:CDS
TGAAAAGGTGAGCGATTTAT+TGG 0.236609 1_4:+19720502 Msa0154920:CDS
TTCCTCTTTCTTTCTTCCTT+TGG 0.240326 1_4:+19718586 Msa0154920:five_prime_UTR
CTCTCCATGCTTGTCTGATC+TGG 0.259849 1_4:+19718782 Msa0154920:five_prime_UTR
GGAAAAGGGGTGCGAATCTA+AGG 0.266382 1_4:+19719772 Msa0154920:CDS
GTGTTGTGCTGCAGCATAAA+AGG 0.287438 1_4:+19724157 Msa0154920:three_prime_UTR
AAATCAAAACTTTATCCAAT+AGG 0.292042 1_4:-19719129 None:intergenic
TGTCTAAAACAAATATATTT+AGG 0.297109 1_4:+19720003 Msa0154920:CDS
CTTTGAAGTAGGAAACAAAA+AGG 0.311010 1_4:-19718834 None:intergenic
CAATTCCACCAGATTATACT+TGG 0.314172 1_4:+19723924 Msa0154920:CDS
AAGGATTGAGGCCTATTCTT+TGG 0.316054 1_4:+19720690 Msa0154920:CDS
ATCCATCCCTTGTGCTGTTT+AGG 0.317424 1_4:+19719213 Msa0154920:five_prime_UTR
AGCCTCTTGCTTGGGCAAAA+TGG 0.326240 1_4:+19719616 Msa0154920:CDS
AATCCAACCAGCACTGAAAA+AGG 0.327215 1_4:-19719085 None:intergenic
ATCTTGGTTTCAGTGGATAA+AGG 0.328101 1_4:+19723829 Msa0154920:CDS
GAGCAAGCACTGACCTTAAC+AGG 0.333513 1_4:-19720839 None:intergenic
CTCTTTCTTTCTTCCTTTGG+TGG 0.345300 1_4:+19718589 Msa0154920:five_prime_UTR
CAATTGCCTTCTTTCATCTT+CGG 0.347048 1_4:-19720249 None:intergenic
GGGATCGATGTTGCAAAGTT+TGG 0.347521 1_4:+19719243 Msa0154920:CDS
TTGGGTATTAATCATTTCAT+TGG 0.351047 1_4:+19718875 Msa0154920:five_prime_UTR
CTGTGATACCTTTCATTTCA+AGG 0.359358 1_4:+19719721 Msa0154920:CDS
TAGAAGCTGCCATATTTGTT+TGG 0.360904 1_4:+19724100 Msa0154920:three_prime_UTR
TAAGTTACTAACCTTGGTTT+TGG 0.365215 1_4:-19718903 None:intergenic
AATCAAAACTTTATCCAATA+GGG 0.365910 1_4:-19719128 None:intergenic
TAGAAGCTGCCATATTTGTT+TGG 0.369962 1_4:+19724049 Msa0154920:three_prime_UTR
CAAGTTTGTGGTGACCCTAT+TGG 0.373629 1_4:+19719114 Msa0154920:five_prime_UTR
GCAATTATAGTTGAGTTAAT+GGG 0.374694 1_4:-19724240 None:intergenic
AAGTGAGATCCAAACAAATA+TGG 0.378296 1_4:-19724058 None:intergenic
GCTGAAATGCTTATGGTTGT+TGG 0.381013 1_4:+19719492 Msa0154920:CDS
AGAATTTACAGAAGAAGCTT+TGG 0.383345 1_4:-19720615 None:intergenic
TCTACGCAAAGAGAACTTCT+TGG 0.388331 1_4:-19720479 None:intergenic
AATAAATAAATAAATACAAA+AGG 0.388391 1_4:-19718693 None:intergenic
CAATCTCTGCTGTGATTGAT+AGG 0.391403 1_4:+19719406 Msa0154920:CDS
CTACCGTTACCATCTTCAAT+AGG 0.394559 1_4:-19720359 None:intergenic
TCTTTCTTTCTTCCTTTGGT+GGG 0.394994 1_4:+19718590 Msa0154920:five_prime_UTR
GAAAAGGTGAGCGATTTATT+GGG 0.399396 1_4:+19720503 Msa0154920:CDS
GCATTATCAGCCTCTTGCTT+GGG 0.401369 1_4:+19719608 Msa0154920:CDS
GGTGGAATTGCAAACGGGTC+TGG 0.404701 1_4:-19723911 None:intergenic
CAAATTTCTCTGCTTCATCT+TGG 0.407176 1_4:+19723813 Msa0154920:CDS
ATAAAATCTAGAGGAGTTCC+TGG 0.407650 1_4:+19720149 Msa0154920:CDS
AGGATTATGGTGAGCTTAAG+AGG 0.411282 1_4:+19719298 Msa0154920:CDS
CACTTACAAGATTTGGAAAA+GGG 0.421955 1_4:+19719758 Msa0154920:CDS
AGGGCTGACATGACTTTGGC+TGG 0.422895 1_4:+19719792 Msa0154920:CDS
TTATGGTTGTTGGTGCTGAT+TGG 0.422928 1_4:+19719502 Msa0154920:CDS
TTCTCTTTGCGTAGATGAAA+AGG 0.429956 1_4:+19720487 Msa0154920:CDS
GTGTAGAAGGTTGCCTCGTT+TGG 0.430443 1_4:+19719638 Msa0154920:CDS
AAACAGAAATGGTAGGATCT+TGG 0.430531 1_4:+19720087 Msa0154920:CDS
GGTGAGCTTAAGAGGATACT+TGG 0.431434 1_4:+19719306 Msa0154920:CDS
CATGCTTGTCTGATCTGGAT+TGG 0.431711 1_4:+19718787 Msa0154920:five_prime_UTR
CTTGGTGATGGTTCAGAGGA+TGG 0.433039 1_4:+19719861 Msa0154920:CDS
CTGCTTCATCTTGGTTTCAG+TGG 0.434475 1_4:+19723822 Msa0154920:CDS
TTGTGCTGTTTAGGTATGGC+AGG 0.436450 1_4:+19719222 Msa0154920:exon
GCAGAGAAATTTGTCGCTGC+AGG 0.438127 1_4:-19723803 None:intergenic
AGCGGCTGCTGAAATGCTTA+TGG 0.441584 1_4:+19719485 Msa0154920:CDS
CGAAGATGAAAGAAGGCAAT+TGG 0.443916 1_4:+19720250 Msa0154920:CDS
AGCATTATCAGCCTCTTGCT+TGG 0.448609 1_4:+19719607 Msa0154920:CDS
GTGATTGTGATTGTTAGTGT+TGG 0.449498 1_4:+19719165 Msa0154920:five_prime_UTR
TTGTGATTGTTAGTGTTGGT+TGG 0.452258 1_4:+19719169 Msa0154920:five_prime_UTR
CTTGGGCAAAATGGTGTAGA+AGG 0.452313 1_4:+19719625 Msa0154920:CDS
TGGTCATAGTCCTGTGCATA+AGG 0.452951 1_4:+19719263 Msa0154920:CDS
ACACTTACAAGATTTGGAAA+AGG 0.454221 1_4:+19719757 Msa0154920:CDS
TGGATTATTCTGCAAGTTTG+TGG 0.455880 1_4:+19719102 Msa0154920:five_prime_UTR
GGTTTAATCTGATTATTTGA+AGG 0.456077 1_4:-19720533 None:intergenic
AGAGACATTCCTATTGAAGA+TGG 0.456127 1_4:+19720350 Msa0154920:CDS
CCTGACATGGATGGACTTGT+CGG 0.456807 1_4:-19723770 None:intergenic
TCCCTTGTGCTGTTTAGGTA+TGG 0.456844 1_4:+19719218 Msa0154920:exon
GAGAAGAACAAATCAAAGAA+AGG 0.457216 1_4:+19723980 Msa0154920:CDS
TCAGTTGACTTGGAGGCGCC+AGG 0.458205 1_4:+19720061 Msa0154920:CDS
GAAAATAAGCAGGAAAAGAA+AGG 0.458780 1_4:+19720392 Msa0154920:CDS
AAAGAGGAAGTTGTGAATGT+TGG 0.459212 1_4:-19718572 None:intergenic
CTTTCTTTCTTCCTTTGGTG+GGG 0.459992 1_4:+19718591 Msa0154920:five_prime_UTR
ATCGTTAAGTTCTTCACTCT+CGG 0.461882 1_4:-19720219 None:intergenic
TGAGATCATGCAGAGTGATC+CGG 0.463016 1_4:-19719895 None:intergenic
TTTGGAAAAGTCATAAAGCT+AGG 0.465645 1_4:+19724118 Msa0154920:three_prime_UTR
TTTGCAACAATGTCAAGTAA+TGG 0.466040 1_4:-19720752 None:intergenic
AGAAAGGATGGTTTGGTGGA+TGG 0.466730 1_4:+19720408 Msa0154920:CDS
GGGATTATAACCTTTGAAGT+AGG 0.468247 1_4:-19718845 None:intergenic
ATTGGAGGATGCACTTAAGC+TGG 0.468456 1_4:+19720268 Msa0154920:CDS
GATGGTAACGGTAGCAATAG+TGG 0.470448 1_4:+19720368 Msa0154920:CDS
CAGGAAAAGAAAGGATGGTT+TGG 0.470506 1_4:+19720401 Msa0154920:CDS
GAACCTGCAGCAGATGAACT+AGG 0.474066 1_4:-19723863 None:intergenic
ACTTACAACAAAACTTCCAA+TGG 0.475435 1_4:+19720808 Msa0154920:CDS
AGAAGAACAAATCAAAGAAA+GGG 0.475808 1_4:+19723981 Msa0154920:CDS
CGCCCTAGTTCATCTGCTGC+AGG 0.477336 1_4:+19723860 Msa0154920:CDS
TAATCTGGTGGAATTGCAAA+CGG 0.477515 1_4:-19723917 None:intergenic
ACTCTGATGGTGGGAACCAC+AGG 0.479198 1_4:-19723689 None:intergenic
ATGACTTTGGCTGGTTTCGA+CGG 0.483089 1_4:+19719801 Msa0154920:CDS
CATGATCTCACACAAGGAAA+AGG 0.485210 1_4:+19719908 Msa0154920:CDS
CGTGAAAATGAATATAAGAA+AGG 0.486287 1_4:+19720671 Msa0154920:CDS
TATTTACAACAATAAAATCA+AGG 0.488975 1_4:-19724343 None:intergenic
ATAGGAATGTCTCTAAAGCT+TGG 0.492744 1_4:-19720341 None:intergenic
CTTACAACAAAACTTCCAAT+GGG 0.493342 1_4:+19720809 Msa0154920:CDS
CTGCAGGTTCCAGCAGTAGT+AGG 0.495341 1_4:+19723876 Msa0154920:CDS
ATAAATAAATAAATACAAAA+GGG 0.499372 1_4:-19718692 None:intergenic
CTCTCTTCGCCTGACATGGA+TGG 0.499410 1_4:-19723779 None:intergenic
TTCTGTTGAGGTTGTTGTGA+GGG 0.502579 1_4:+19720565 Msa0154920:CDS
ATATGGCAGCTTCTATTCAA+TGG 0.502947 1_4:-19724041 None:intergenic
ATATGGCAGCTTCTATTCAA+TGG 0.502947 1_4:-19724092 None:intergenic
GCAGTGACCCAAGTATAATC+TGG 0.510448 1_4:-19723932 None:intergenic
TGGATCTCACTTCACTTCAG+TGG 0.510968 1_4:+19724069 Msa0154920:three_prime_UTR
TCTAAGGGCTGACATGACTT+TGG 0.515499 1_4:+19719788 Msa0154920:CDS
CCGACAAGTCCATCCATGTC+AGG 0.516227 1_4:+19723770 Msa0154920:CDS
TTGGTGATGGTTCAGAGGAT+GGG 0.516406 1_4:+19719862 Msa0154920:CDS
GGGTGAGATTCGTACGGAAG+CGG 0.516999 1_4:+19719353 Msa0154920:CDS
GTGAGCTTAAGAGGATACTT+GGG 0.519970 1_4:+19719307 Msa0154920:CDS
CACCAAAGGAAGAAAGAAAG+AGG 0.520003 1_4:-19718588 None:intergenic
TTTACCTAAGCTGTGTAATG+TGG 0.520667 1_4:+19719332 Msa0154920:CDS
ATGCTGCAGCACAACACCAT+TGG 0.520683 1_4:-19724151 None:intergenic
TGTTTGAGAGAGAGAAAGAG+AGG 0.521113 1_4:-19718637 None:intergenic
GAAGTTGTGAATGTTGGAAA+AGG 0.521824 1_4:-19718566 None:intergenic
GCAGATGAACTAGGGCGGTA+TGG 0.522475 1_4:-19723854 None:intergenic
GGTGTTGCGAATTCATCTAA+TGG 0.523036 1_4:-19723746 None:intergenic
AATCTGGTGGAATTGCAAAC+GGG 0.523683 1_4:-19723916 None:intergenic
TGAAGAGGAGTATCGCGATT+CGG 0.526239 1_4:-19719438 None:intergenic
GCCTGGTATTGATGTTACTC+AGG 0.530031 1_4:+19720025 Msa0154920:CDS
CTGAACAATGATAGTGATGA+GGG 0.531253 1_4:+19720302 Msa0154920:CDS
TCATCGTCTGTCATAGCTCC+AGG 0.531703 1_4:-19720167 None:intergenic
AAAACAAATATATTTAGGCC+TGG 0.531734 1_4:+19720008 Msa0154920:CDS
TCATGCAGAGTGATCCGGGC+TGG 0.533564 1_4:-19719890 None:intergenic
TTTGGCGAAAGCCAAAGAAT+AGG 0.538222 1_4:-19720701 None:intergenic
AGCAGAAGTCGTCATAAAGA+TGG 0.538908 1_4:+19720644 Msa0154920:CDS
GTTTGAGAGAGAGAAAGAGA+GGG 0.545889 1_4:-19718636 None:intergenic
ACCTCAACAGAATGTCTCCC+TGG 0.545970 1_4:-19720554 None:intergenic
TTAACAGGAAAAGTTCCCAT+TGG 0.546615 1_4:-19720824 None:intergenic
AGGGCTCTCTTCGCCTGACA+TGG 0.547387 1_4:-19723783 None:intergenic
GAGATCATGCAGAGTGATCC+GGG 0.550659 1_4:-19719894 None:intergenic
GCGCCAGGAGAAAACAGAAA+TGG 0.553288 1_4:+19720076 Msa0154920:CDS
TGTGCTGTTTAGGTATGGCA+GGG 0.554264 1_4:+19719223 Msa0154920:exon
CAAATCTTGTAAGTGTCTGA+AGG 0.555543 1_4:-19719750 None:intergenic
GGTAGGATCTTGGAAAGCTA+AGG 0.558300 1_4:+19720097 Msa0154920:CDS
TACCTAAACAGCACAAGGGA+TGG 0.559050 1_4:-19719215 None:intergenic
GGTTCCCACCATCAGAGTAT+TGG 0.560691 1_4:+19723694 Msa0154920:CDS
GAAAAGAAAGGATGGTTTGG+TGG 0.562638 1_4:+19720404 Msa0154920:CDS
TCGCGATACTCCTCTTCACT+TGG 0.563493 1_4:+19719443 Msa0154920:CDS
ATAAGCAGGAAAAGAAAGGA+TGG 0.566965 1_4:+19720396 Msa0154920:CDS
AGATGAAAGAAGGCAATTGG+AGG 0.568053 1_4:+19720253 Msa0154920:CDS
TTGTGAGGGGCGATGAGCAA+CGG 0.572804 1_4:+19720579 Msa0154920:CDS
TATTCAGGTTGCCATTCCTG+TGG 0.573026 1_4:+19723673 Msa0154920:intron
GTTTGGTAGCGACGATGTGG+AGG 0.573644 1_4:+19719655 Msa0154920:CDS
TCACTTGGCTGTTAAATTAG+GGG 0.574791 1_4:+19719458 Msa0154920:CDS
TCAAATAATCAGATTAAACC+AGG 0.576252 1_4:+19720536 Msa0154920:CDS
AGTGACCAATACTCTGATGG+TGG 0.577816 1_4:-19723699 None:intergenic
CTGATCTGGATTGGATCACA+AGG 0.578500 1_4:+19718796 Msa0154920:five_prime_UTR
TCACCCACATTACACAGCTT+AGG 0.579319 1_4:-19719336 None:intergenic
GATGGTGGGAACCACAGGAA+TGG 0.580921 1_4:-19723684 None:intergenic
AAAGAGAGAAACCCCACCAA+AGG 0.581628 1_4:-19718602 None:intergenic
AAAATCACAGCCTTATGCAC+AGG 0.583563 1_4:-19719273 None:intergenic
TGGAGTTTGCAGAATGAACA+AGG 0.585411 1_4:+19719522 Msa0154920:CDS
GCTAGGATTTGATTCTCCAA+TGG 0.585418 1_4:+19724135 Msa0154920:three_prime_UTR
CAATAGTGGAGAAAATAAGC+AGG 0.586148 1_4:+19720382 Msa0154920:CDS
AACCTGCAGCAGATGAACTA+GGG 0.586365 1_4:-19723862 None:intergenic
ATTTACAACAATAAAATCAA+GGG 0.591541 1_4:-19724342 None:intergenic
TGCCATACCTAAACAGCACA+AGG 0.592296 1_4:-19719220 None:intergenic
GGTGCAATCCTTGAAATGAA+AGG 0.596454 1_4:-19719729 None:intergenic
CAGAGAAATTTGTCGCTGCA+GGG 0.601633 1_4:-19723802 None:intergenic
TCTGTTGAGGTTGTTGTGAG+GGG 0.602480 1_4:+19720566 Msa0154920:CDS
AATTTAACAGCCAAGTGAAG+AGG 0.606406 1_4:-19719453 None:intergenic
ACGCAAAGAGAACTTCTTGG+TGG 0.607111 1_4:-19720476 None:intergenic
AATTCCACCAGATTATACTT+GGG 0.608111 1_4:+19723925 Msa0154920:CDS
ATTCTGTTGAGGTTGTTGTG+AGG 0.608833 1_4:+19720564 Msa0154920:CDS
ATGAATATAAGAAAGGATTG+AGG 0.612683 1_4:+19720678 Msa0154920:CDS
GTTGTAAGTATAAAATCTAG+AGG 0.612791 1_4:+19720140 Msa0154920:CDS
ACCAGGGAGACATTCTGTTG+AGG 0.613862 1_4:+19720553 Msa0154920:CDS
CATTGGACAAACCAAAACCA+AGG 0.613920 1_4:+19718892 Msa0154920:five_prime_UTR
GAAAAGGGGTGCGAATCTAA+GGG 0.614309 1_4:+19719773 Msa0154920:CDS
TGTTGTGCTGCAGCATAAAA+GGG 0.614359 1_4:+19724158 Msa0154920:three_prime_UTR
CACATCGTCGCTACCAAACG+AGG 0.615764 1_4:-19719651 None:intergenic
CAATCCAGATCAGACAAGCA+TGG 0.617432 1_4:-19718786 None:intergenic
ACTGAACAATGATAGTGATG+AGG 0.620972 1_4:+19720301 Msa0154920:CDS
ATGATCTCACTTCACTTCAG+TGG 0.621864 1_4:+19724018 Msa0154920:exon
CTCGTTTGGTAGCGACGATG+TGG 0.623287 1_4:+19719652 Msa0154920:CDS
TTACCTAAGCTGTGTAATGT+GGG 0.623380 1_4:+19719333 Msa0154920:CDS
GAGGATGGGAAAGTCCAGCC+CGG 0.628594 1_4:+19719876 Msa0154920:CDS
GTGACCCAAGTATAATCTGG+TGG 0.630524 1_4:-19723929 None:intergenic
GCCTGAGTAACATCAATACC+AGG 0.632873 1_4:-19720026 None:intergenic
GTGACCAATACTCTGATGGT+GGG 0.634458 1_4:-19723698 None:intergenic
CAGGAGAAAACAGAAATGGT+AGG 0.637085 1_4:+19720080 Msa0154920:CDS
TGTTAAATTAGGGGATGAAG+CGG 0.639879 1_4:+19719467 Msa0154920:CDS
GTTTGCAGAATGAACAAGGG+TGG 0.641695 1_4:+19719526 Msa0154920:CDS
TGAGCTTAAGAGGATACTTG+GGG 0.641820 1_4:+19719308 Msa0154920:CDS
ATTCCTATTGAAGATGGTAA+CGG 0.643760 1_4:+19720356 Msa0154920:CDS
TGAGGGGCGATGAGCAACGG+AGG 0.648943 1_4:+19720582 Msa0154920:CDS
ACTTACAAGATTTGGAAAAG+GGG 0.652824 1_4:+19719759 Msa0154920:CDS
TGGCGCCTCCAAGTCAACTG+AGG 0.653180 1_4:-19720059 None:intergenic
GATCTCACACAAGGAAAAGG+AGG 0.660308 1_4:+19719911 Msa0154920:CDS
AAAAGTGACCAATACTCTGA+TGG 0.668899 1_4:-19723702 None:intergenic
TAATGTGGGTGAGATTCGTA+CGG 0.669654 1_4:+19719347 Msa0154920:CDS
CAAATAATCAGATTAAACCA+GGG 0.677591 1_4:+19720537 Msa0154920:CDS
GACATGGATGGACTTGTCGG+CGG 0.681897 1_4:-19723767 None:intergenic
ATAAAAGGGATGAAACATTG+TGG 0.682574 1_4:+19724172 Msa0154920:three_prime_UTR
GGAGTTTGCAGAATGAACAA+GGG 0.699547 1_4:+19719523 Msa0154920:CDS
GAGCTTAAGAGGATACTTGG+GGG 0.708775 1_4:+19719309 Msa0154920:CDS
TGAACAATGATAGTGATGAG+GGG 0.712496 1_4:+19720303 Msa0154920:CDS
CTGCAGCAGATGAACTAGGG+CGG 0.715429 1_4:-19723859 None:intergenic
ACTCTGCATGATCTCACACA+AGG 0.718060 1_4:+19719902 Msa0154920:CDS
GCCATACCTAAACAGCACAA+GGG 0.724512 1_4:-19719219 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTGCTTTAAATAAT+TGG + chr1_4:19722403-19722422 Msa0154920:intron 10.0%
!!! TTTTTTCTATTTTACTATAA+GGG + chr1_4:19723219-19723238 Msa0154920:intron 10.0%
!!! TGTCTAAAACAAATATATTT+AGG + chr1_4:19720003-19720022 Msa0154920:CDS 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - chr1_4:19721058-19721077 None:intergenic 15.0%
!! GAATATAATTAATCATGTTT+CGG + chr1_4:19721086-19721105 Msa0154920:intron 15.0%
!! ATAGTAAAATAGAAAAAAGA+TGG - chr1_4:19723217-19723236 None:intergenic 15.0%
!!! CTTTTTTCTATTTTACTATA+AGG + chr1_4:19723218-19723237 Msa0154920:intron 15.0%
!! ATTTACAACAATAAAATCAA+GGG - chr1_4:19724345-19724364 None:intergenic 15.0%
!! TATTTACAACAATAAAATCA+AGG - chr1_4:19724346-19724365 None:intergenic 15.0%
!! AATAAATACAAAAGGGAAAT+TGG - chr1_4:19718688-19718707 None:intergenic 20.0%
!!! TTTTGGTTTTTGGTTTATTT+AGG + chr1_4:19719047-19719066 Msa0154920:intron 20.0%
!!! TTTTGGTTTATTTAGGTTTT+TGG + chr1_4:19719054-19719073 Msa0154920:intron 20.0%
!!! TTTGGTTTATTTAGGTTTTT+GGG + chr1_4:19719055-19719074 Msa0154920:intron 20.0%
!! AATCAAAACTTTATCCAATA+GGG - chr1_4:19719131-19719150 None:intergenic 20.0%
!! AAATCAAAACTTTATCCAAT+AGG - chr1_4:19719132-19719151 None:intergenic 20.0%
!!! TCAATTTTTAATGGAAAGTT+TGG - chr1_4:19720722-19720741 None:intergenic 20.0%
!!! AAGAGTTCTTCAATTTTTAA+TGG - chr1_4:19720731-19720750 None:intergenic 20.0%
!!! ACTAACAATATGAATTTTCT+GGG + chr1_4:19720886-19720905 Msa0154920:intron 20.0%
!!! ATTTTCTCAAATTATTATCG+GGG - chr1_4:19721056-19721075 None:intergenic 20.0%
!!! CATTTTCTCAAATTATTATC+GGG - chr1_4:19721057-19721076 None:intergenic 20.0%
!!! TCTAATTAGCTTGAATTTTA+TGG + chr1_4:19721550-19721569 Msa0154920:intron 20.0%
!! CAATACTAAATACAAATGTA+GGG - chr1_4:19721647-19721666 None:intergenic 20.0%
!! TTCTATCCAATCATAATTAA+TGG - chr1_4:19721690-19721709 None:intergenic 20.0%
!! AAAAAAAAAAAAATCCCACA+GGG - chr1_4:19721848-19721867 None:intergenic 20.0%
!! AAAAAAAAAAAAAATCCCAC+AGG - chr1_4:19721849-19721868 None:intergenic 20.0%
!!! GTTTGTTTCTTTTGTATTTT+TGG + chr1_4:19721870-19721889 Msa0154920:intron 20.0%
!!! TTTTGTATTTTTGGATACAA+GGG + chr1_4:19721879-19721898 Msa0154920:intron 20.0%
!! TTATAAAATAGATATACTCC+AGG + chr1_4:19722151-19722170 Msa0154920:intron 20.0%
!! TATAAAATAGATATACTCCA+GGG + chr1_4:19722152-19722171 Msa0154920:intron 20.0%
!! ATGAACTATAAGTTATAATG+TGG - chr1_4:19722636-19722655 None:intergenic 20.0%
!!! GTTTTTGTAAAAAAAAGTCT+AGG + chr1_4:19722703-19722722 Msa0154920:intron 20.0%
!! CAAAGATTCTATTAATTATG+TGG - chr1_4:19722953-19722972 None:intergenic 20.0%
!!! AGATTTAATCCCTATAATTT+TGG + chr1_4:19723080-19723099 Msa0154920:intron 20.0%
!! AAGGAAATTCCAAAATTATA+GGG - chr1_4:19723092-19723111 None:intergenic 20.0%
!! AAAGGAAATTCCAAAATTAT+AGG - chr1_4:19723093-19723112 None:intergenic 20.0%
!! AATAATGAAGAACAGTATAA+AGG - chr1_4:19723111-19723130 None:intergenic 20.0%
!! TCATCTATAAAGAAAGATAT+GGG - chr1_4:19723628-19723647 None:intergenic 20.0%
!! ATCATCTATAAAGAAAGATA+TGG - chr1_4:19723629-19723648 None:intergenic 20.0%
!!! GGAAAAGGTATTACTAAAAA+TGG - chr1_4:19718554-19718573 None:intergenic 25.0%
!! TTTGAAGTAGGAAACAAAAA+GGG - chr1_4:19718836-19718855 None:intergenic 25.0%
!! GTTATAATCCCTTGATTTTT+GGG + chr1_4:19718857-19718876 Msa0154920:five_prime_UTR 25.0%
! GATTAATACCCAAAAATCAA+GGG - chr1_4:19718868-19718887 None:intergenic 25.0%
! TGATTAATACCCAAAAATCA+AGG - chr1_4:19718869-19718888 None:intergenic 25.0%
! TTGGGTATTAATCATTTCAT+TGG + chr1_4:19718875-19718894 Msa0154920:five_prime_UTR 25.0%
! ATAAAGTAAGTTACTAACCT+TGG - chr1_4:19718912-19718931 None:intergenic 25.0%
!!! AAGAAAGAAAAGTATCAAGT+GGG - chr1_4:19718970-19718989 None:intergenic 25.0%
!!! AAAGAAAGAAAAGTATCAAG+TGG - chr1_4:19718971-19718990 None:intergenic 25.0%
! TCTCATTCTAAATTGCTAAA+TGG + chr1_4:19719020-19719039 Msa0154920:intron 25.0%
! CTCATTCTAAATTGCTAAAT+GGG + chr1_4:19719021-19719040 Msa0154920:intron 25.0%
!!! TTTATTTAGGTTTTTGGGAT+AGG + chr1_4:19719060-19719079 Msa0154920:intron 25.0%
! AAAACAAATATATTTAGGCC+TGG + chr1_4:19720008-19720027 Msa0154920:CDS 25.0%
! GTTGTAAGTATAAAATCTAG+AGG + chr1_4:19720140-19720159 Msa0154920:CDS 25.0%
! GGTTTAATCTGATTATTTGA+AGG - chr1_4:19720536-19720555 None:intergenic 25.0%
! TCAAATAATCAGATTAAACC+AGG + chr1_4:19720536-19720555 Msa0154920:CDS 25.0%
! CAAATAATCAGATTAAACCA+GGG + chr1_4:19720537-19720556 Msa0154920:CDS 25.0%
! CGTGAAAATGAATATAAGAA+AGG + chr1_4:19720671-19720690 Msa0154920:CDS 25.0%
! ATGAATATAAGAAAGGATTG+AGG + chr1_4:19720678-19720697 Msa0154920:CDS 25.0%
!! CACTAACAATATGAATTTTC+TGG + chr1_4:19720885-19720904 Msa0154920:intron 25.0%
! GTCTACAAATCATCATTATT+CGG + chr1_4:19721352-19721371 Msa0154920:intron 25.0%
! TTCAAGCTAATTAGATGAAA+TGG - chr1_4:19721545-19721564 None:intergenic 25.0%
! CTCTCTATTTAAGCTTATTA+AGG - chr1_4:19721584-19721603 None:intergenic 25.0%
! GCAATACTAAATACAAATGT+AGG - chr1_4:19721648-19721667 None:intergenic 25.0%
! TAATTAATGGAAAGTGAAAC+AGG - chr1_4:19721677-19721696 None:intergenic 25.0%
! CACTTTCCATTAATTATGAT+TGG + chr1_4:19721681-19721700 Msa0154920:intron 25.0%
!! ATCCTTTTACCTTATCAAAA+TGG + chr1_4:19721709-19721728 Msa0154920:intron 25.0%
!! TCCTTTTACCTTATCAAAAT+GGG + chr1_4:19721710-19721729 Msa0154920:intron 25.0%
! AAAAAAAAAAAATCCCACAG+GGG - chr1_4:19721847-19721866 None:intergenic 25.0%
!!! CTTTTGTATTTTTGGATACA+AGG + chr1_4:19721878-19721897 Msa0154920:intron 25.0%
!! TTTTAATCCAGACAATATTC+TGG - chr1_4:19721959-19721978 None:intergenic 25.0%
! CAAAAATTTCGGTAATAAGT+GGG - chr1_4:19722022-19722041 None:intergenic 25.0%
! ACAAAAATTTCGGTAATAAG+TGG - chr1_4:19722023-19722042 None:intergenic 25.0%
!! TTTTACATTACAAAATACCC+TGG - chr1_4:19722172-19722191 None:intergenic 25.0%
! AACAGGATATTATTACACAT+TGG - chr1_4:19722477-19722496 None:intergenic 25.0%
! TGTGTAATAATATCCTGTTA+AGG + chr1_4:19722478-19722497 Msa0154920:intron 25.0%
! ATGTGGTATTAATTGAATAG+AGG - chr1_4:19722619-19722638 None:intergenic 25.0%
!!! ACCTTTTATTTCTCAAGTAT+AGG + chr1_4:19722675-19722694 Msa0154920:intron 25.0%
! ACCTATACTTGAGAAATAAA+AGG - chr1_4:19722679-19722698 None:intergenic 25.0%
! AAAACGAAATCAAATCACAA+AGG - chr1_4:19722797-19722816 None:intergenic 25.0%
! TTCTATTAATTATGTGGCAA+AGG - chr1_4:19722947-19722966 None:intergenic 25.0%
! CAGAGATATAGACATAAATA+GGG - chr1_4:19722990-19723009 None:intergenic 25.0%
! TCAGAGATATAGACATAAAT+AGG - chr1_4:19722991-19723010 None:intergenic 25.0%
! TATCTCTGATGTATGTAATT+AGG + chr1_4:19723002-19723021 Msa0154920:intron 25.0%
! AATATGTAGACTTGAGAATA+AGG - chr1_4:19723184-19723203 None:intergenic 25.0%
!!! TTTTAGTTTAGGACAAAAGA+TGG + chr1_4:19723395-19723414 Msa0154920:intron 25.0%
!! TTTAGTTTAGGACAAAAGAT+GGG + chr1_4:19723396-19723415 Msa0154920:intron 25.0%
! ACATATCAAGAATGTTTAGA+AGG - chr1_4:19723469-19723488 None:intergenic 25.0%
! TTCTAAACATTCTTGATATG+TGG + chr1_4:19723468-19723487 Msa0154920:intron 25.0%
! ACAGTGAAAAAACACAAAAA+GGG - chr1_4:19723595-19723614 None:intergenic 25.0%
! AACAGTGAAAAAACACAAAA+AGG - chr1_4:19723596-19723615 None:intergenic 25.0%
! AGAAGAACAAATCAAAGAAA+GGG + chr1_4:19723981-19724000 Msa0154920:CDS 25.0%
!! ATGACTTTTCCAAACAAATA+TGG - chr1_4:19724112-19724131 None:intergenic 25.0%
! GCAATTATAGTTGAGTTAAT+GGG - chr1_4:19724243-19724262 None:intergenic 25.0%
! TGCAATTATAGTTGAGTTAA+TGG - chr1_4:19724244-19724263 None:intergenic 25.0%
!! CTTTGAAGTAGGAAACAAAA+AGG - chr1_4:19718837-19718856 None:intergenic 30.0%
!! CTTTTTGTTTCCTACTTCAA+AGG + chr1_4:19718835-19718854 Msa0154920:five_prime_UTR 30.0%
! GGTTATAATCCCTTGATTTT+TGG + chr1_4:19718856-19718875 Msa0154920:five_prime_UTR 30.0%
! TAAGTTACTAACCTTGGTTT+TGG - chr1_4:19718906-19718925 None:intergenic 30.0%
!! AGAAAGAAAAGTATCAAGTG+GGG - chr1_4:19718969-19718988 None:intergenic 30.0%
! AATTGCTAAATGGGTCATTT+TGG + chr1_4:19719030-19719049 Msa0154920:intron 30.0%
!!! AAATGGGTCATTTTGGTTTT+TGG + chr1_4:19719037-19719056 Msa0154920:intron 30.0%
TTCACTTGGCTGTTAAATTA+GGG + chr1_4:19719457-19719476 Msa0154920:CDS 30.0%
ACACTTACAAGATTTGGAAA+AGG + chr1_4:19719757-19719776 Msa0154920:CDS 30.0%
CACTTACAAGATTTGGAAAA+GGG + chr1_4:19719758-19719777 Msa0154920:CDS 30.0%
ACTTACAAGATTTGGAAAAG+GGG + chr1_4:19719759-19719778 Msa0154920:CDS 30.0%
!! GATCAAAGTGTTCTTTTTCT+TGG + chr1_4:19719843-19719862 Msa0154920:CDS 30.0%
ATTCCTATTGAAGATGGTAA+CGG + chr1_4:19720356-19720375 Msa0154920:CDS 30.0%
GAAAATAAGCAGGAAAAGAA+AGG + chr1_4:19720392-19720411 Msa0154920:CDS 30.0%
AGAATTTACAGAAGAAGCTT+TGG - chr1_4:19720618-19720637 None:intergenic 30.0%
TTTGCAACAATGTCAAGTAA+TGG - chr1_4:19720755-19720774 None:intergenic 30.0%
ACTTACAACAAAACTTCCAA+TGG + chr1_4:19720808-19720827 Msa0154920:CDS 30.0%
CTTACAACAAAACTTCCAAT+GGG + chr1_4:19720809-19720828 Msa0154920:CDS 30.0%
! GTAACAAGCAAGAGTATAAT+TGG - chr1_4:19720963-19720982 None:intergenic 30.0%
CAAGAAATAGACAGAGAAAA+GGG + chr1_4:19721217-19721236 Msa0154920:intron 30.0%
AAGAAATAGACAGAGAAAAG+GGG + chr1_4:19721218-19721237 Msa0154920:intron 30.0%
AAGCTAATTAGATGAAATGG+AGG - chr1_4:19721542-19721561 None:intergenic 30.0%
!! TCCCATTTTGATAAGGTAAA+AGG - chr1_4:19721714-19721733 None:intergenic 30.0%
! TAGTGGACAAATGAATATTC+TGG - chr1_4:19721925-19721944 None:intergenic 30.0%
CGACGAAGTAACAAAAATTT+CGG - chr1_4:19722033-19722052 None:intergenic 30.0%
!! TTTTTGTTACTTCGTCGTAT+TGG + chr1_4:19722036-19722055 Msa0154920:intron 30.0%
! AGTTGTTTCAGAAGAAGAAA+AGG - chr1_4:19722128-19722147 None:intergenic 30.0%
CCATATAATATCACCTTAAC+AGG - chr1_4:19722494-19722513 None:intergenic 30.0%
CCTGTTAAGGTGATATTATA+TGG + chr1_4:19722491-19722510 Msa0154920:intron 30.0%
!!! CTAGGTATTAGTTTTGCTTT+AGG + chr1_4:19722721-19722740 Msa0154920:intron 30.0%
! TTTCGTTTTCAACAACCATT+TGG + chr1_4:19722808-19722827 Msa0154920:intron 30.0%
CTAACTTACAAATCACCAAA+TGG - chr1_4:19722826-19722845 None:intergenic 30.0%
! CATTTGGTGATTTGTAAGTT+AGG + chr1_4:19722824-19722843 Msa0154920:intron 30.0%
!!! TTTTGTTGTTTAAGCTCTTG+AGG + chr1_4:19722912-19722931 Msa0154920:intron 30.0%
TGATGCAACTAGATAGATAT+AGG + chr1_4:19723055-19723074 Msa0154920:intron 30.0%
!! TCATTGGCATTGATAAGTTT+GGG - chr1_4:19723265-19723284 None:intergenic 30.0%
!! ATCATTGGCATTGATAAGTT+TGG - chr1_4:19723266-19723285 None:intergenic 30.0%
!!! GGTCTTATTGGTTTTAGTTT+AGG + chr1_4:19723384-19723403 Msa0154920:intron 30.0%
! AGGAATGAGGTTTAATTTCA+AGG - chr1_4:19723449-19723468 None:intergenic 30.0%
AAGAATGTTTAGAAGGAATG+AGG - chr1_4:19723462-19723481 None:intergenic 30.0%
! TTTCAATGCATTTTTCCATG+TGG + chr1_4:19723539-19723558 Msa0154920:intron 30.0%
AGTGAAAAAACACAAAAAGG+GGG - chr1_4:19723593-19723612 None:intergenic 30.0%
CAGTGAAAAAACACAAAAAG+GGG - chr1_4:19723594-19723613 None:intergenic 30.0%
AATTCCACCAGATTATACTT+GGG + chr1_4:19723925-19723944 Msa0154920:CDS 30.0%
GAGAAGAACAAATCAAAGAA+AGG + chr1_4:19723980-19723999 Msa0154920:CDS 30.0%
AAGTGAGATCCAAACAAATA+TGG - chr1_4:19724061-19724080 None:intergenic 30.0%
TTTGGAAAAGTCATAAAGCT+AGG + chr1_4:19724118-19724137 Msa0154920:three_prime_UTR 30.0%
ATAAAAGGGATGAAACATTG+TGG + chr1_4:19724172-19724191 Msa0154920:three_prime_UTR 30.0%
GAAGTTGTGAATGTTGGAAA+AGG - chr1_4:19718569-19718588 None:intergenic 35.0%
AAAGAGGAAGTTGTGAATGT+TGG - chr1_4:19718575-19718594 None:intergenic 35.0%
TTCCTCTTTCTTTCTTCCTT+TGG + chr1_4:19718586-19718605 Msa0154920:five_prime_UTR 35.0%
TCTTTCTTTCTTCCTTTGGT+GGG + chr1_4:19718590-19718609 Msa0154920:five_prime_UTR 35.0%
!! GGGATTATAACCTTTGAAGT+AGG - chr1_4:19718848-19718867 None:intergenic 35.0%
TGGATTATTCTGCAAGTTTG+TGG + chr1_4:19719102-19719121 Msa0154920:five_prime_UTR 35.0%
GTGATTGTGATTGTTAGTGT+TGG + chr1_4:19719165-19719184 Msa0154920:five_prime_UTR 35.0%
!! TTGTGATTGTTAGTGTTGGT+TGG + chr1_4:19719169-19719188 Msa0154920:five_prime_UTR 35.0%
!! GCTGTGATTTTGAAGGATTA+TGG + chr1_4:19719285-19719304 Msa0154920:CDS 35.0%
TTTACCTAAGCTGTGTAATG+TGG + chr1_4:19719332-19719351 Msa0154920:CDS 35.0%
TTACCTAAGCTGTGTAATGT+GGG + chr1_4:19719333-19719352 Msa0154920:CDS 35.0%
!! TTCGATTTTAGAGGAAGAGA+AGG + chr1_4:19719377-19719396 Msa0154920:CDS 35.0%
AATTTAACAGCCAAGTGAAG+AGG - chr1_4:19719456-19719475 None:intergenic 35.0%
CTTCACTTGGCTGTTAAATT+AGG + chr1_4:19719456-19719475 Msa0154920:CDS 35.0%
TCACTTGGCTGTTAAATTAG+GGG + chr1_4:19719458-19719477 Msa0154920:CDS 35.0%
TGTTAAATTAGGGGATGAAG+CGG + chr1_4:19719467-19719486 Msa0154920:CDS 35.0%
! GAGGATGAGAGACTTTTATA+TGG + chr1_4:19719674-19719693 Msa0154920:CDS 35.0%
CTGTGATACCTTTCATTTCA+AGG + chr1_4:19719721-19719740 Msa0154920:CDS 35.0%
CAAATCTTGTAAGTGTCTGA+AGG - chr1_4:19719753-19719772 None:intergenic 35.0%
CTTCAGACACTTACAAGATT+TGG + chr1_4:19719751-19719770 Msa0154920:CDS 35.0%
! AGTGTTCTTTTTCTTGGTGA+TGG + chr1_4:19719849-19719868 Msa0154920:CDS 35.0%
AAACAGAAATGGTAGGATCT+TGG + chr1_4:19720087-19720106 Msa0154920:CDS 35.0%
ATAAAATCTAGAGGAGTTCC+TGG + chr1_4:19720149-19720168 Msa0154920:CDS 35.0%
ATCGTTAAGTTCTTCACTCT+CGG - chr1_4:19720222-19720241 None:intergenic 35.0%
! TTTTGACCGAAGATGAAAGA+AGG + chr1_4:19720243-19720262 Msa0154920:CDS 35.0%
CAATTGCCTTCTTTCATCTT+CGG - chr1_4:19720252-19720271 None:intergenic 35.0%
! ACTGAACAATGATAGTGATG+AGG + chr1_4:19720301-19720320 Msa0154920:CDS 35.0%
! CTGAACAATGATAGTGATGA+GGG + chr1_4:19720302-19720321 Msa0154920:CDS 35.0%
! TGAACAATGATAGTGATGAG+GGG + chr1_4:19720303-19720322 Msa0154920:CDS 35.0%
!! ATAGGAATGTCTCTAAAGCT+TGG - chr1_4:19720344-19720363 None:intergenic 35.0%
AGAGACATTCCTATTGAAGA+TGG + chr1_4:19720350-19720369 Msa0154920:CDS 35.0%
! CAATAGTGGAGAAAATAAGC+AGG + chr1_4:19720382-19720401 Msa0154920:CDS 35.0%
ATAAGCAGGAAAAGAAAGGA+TGG + chr1_4:19720396-19720415 Msa0154920:CDS 35.0%
TTCTCTTTGCGTAGATGAAA+AGG + chr1_4:19720487-19720506 Msa0154920:CDS 35.0%
TGAAAAGGTGAGCGATTTAT+TGG + chr1_4:19720502-19720521 Msa0154920:CDS 35.0%
GAAAAGGTGAGCGATTTATT+GGG + chr1_4:19720503-19720522 Msa0154920:CDS 35.0%
TTAACAGGAAAAGTTCCCAT+TGG - chr1_4:19720827-19720846 None:intergenic 35.0%
! AATGGGAACTTTTCCTGTTA+AGG + chr1_4:19720826-19720845 Msa0154920:CDS 35.0%
CATGCATGTTATGAAAAAGC+AGG + chr1_4:19720999-19721018 Msa0154920:intron 35.0%
CATGTTATGAAAAAGCAGGA+CGG + chr1_4:19721003-19721022 Msa0154920:intron 35.0%
ATTAGGAACATGTGGGTAAA+AGG + chr1_4:19721185-19721204 Msa0154920:intron 35.0%
TTAGGAACATGTGGGTAAAA+GGG + chr1_4:19721186-19721205 Msa0154920:intron 35.0%
GCAAGAAATAGACAGAGAAA+AGG + chr1_4:19721216-19721235 Msa0154920:intron 35.0%
GAGAAGATAACAGTACTATG+AGG + chr1_4:19721246-19721265 Msa0154920:intron 35.0%
GAGGAACATAATAGAAGAGT+AGG + chr1_4:19721265-19721284 Msa0154920:intron 35.0%
GCATAAGCTAAAAGTGGTAA+AGG - chr1_4:19721419-19721438 None:intergenic 35.0%
!!! TTGTAGCACCGATGTTTTAT+GGG + chr1_4:19721464-19721483 Msa0154920:intron 35.0%
!! GTTCAACTCCCATTTTGATA+AGG - chr1_4:19721721-19721740 None:intergenic 35.0%
TATATAGTTAATGACCCCTG+TGG + chr1_4:19721830-19721849 Msa0154920:intron 35.0%
ATATAGTTAATGACCCCTGT+GGG + chr1_4:19721831-19721850 Msa0154920:intron 35.0%
AAACAAGAAACAGCAGGAAA+AGG - chr1_4:19722063-19722082 None:intergenic 35.0%
GAAAAGGAGAGGTAAATACA+TGG - chr1_4:19722112-19722131 None:intergenic 35.0%
TTTCAGAAGAAGAAAAGGAG+AGG - chr1_4:19722123-19722142 None:intergenic 35.0%
CAAGAAAGAAACTTCGATCA+CGG - chr1_4:19722277-19722296 None:intergenic 35.0%
TCAAAGTGACACAAAGACTT+CGG - chr1_4:19722433-19722452 None:intergenic 35.0%
!! GTCTTTGTGTCACTTTGATT+TGG + chr1_4:19722435-19722454 Msa0154920:intron 35.0%
TACACATTGGTACTCTAGTA+AGG - chr1_4:19722464-19722483 None:intergenic 35.0%
ATACATCTACTTACCTTTCC+TGG + chr1_4:19722516-19722535 Msa0154920:intron 35.0%
TCCTGCATTGTTACTCATTA+AGG + chr1_4:19722550-19722569 Msa0154920:intron 35.0%
TCCTTAATGAGTAACAATGC+AGG - chr1_4:19722554-19722573 None:intergenic 35.0%
AAATCCTTCCTACACATTCT+AGG + chr1_4:19722758-19722777 Msa0154920:intron 35.0%
AATCCTTCCTACACATTCTA+GGG + chr1_4:19722759-19722778 Msa0154920:intron 35.0%
TAGAAAACCCTAGAATGTGT+AGG - chr1_4:19722769-19722788 None:intergenic 35.0%
CCAACAAAGTTTCTGATCAT+TGG - chr1_4:19723281-19723300 None:intergenic 35.0%
CCAATGATCAGAAACTTTGT+TGG + chr1_4:19723278-19723297 Msa0154920:intron 35.0%
! GATGTATGTGAAGAGTATGA+TGG - chr1_4:19723350-19723369 None:intergenic 35.0%
TACTCTTCACATACATCTCT+TGG + chr1_4:19723353-19723372 Msa0154920:intron 35.0%
ACTCTTCACATACATCTCTT+GGG + chr1_4:19723354-19723373 Msa0154920:intron 35.0%
!!! GGAGGGTTTTAAAACATCAT+AGG + chr1_4:19723563-19723582 Msa0154920:intron 35.0%
AAAAGTGACCAATACTCTGA+TGG - chr1_4:19723705-19723724 None:intergenic 35.0%
CAAATTTCTCTGCTTCATCT+TGG + chr1_4:19723813-19723832 Msa0154920:CDS 35.0%
ATCTTGGTTTCAGTGGATAA+AGG + chr1_4:19723829-19723848 Msa0154920:CDS 35.0%
! ATTTTCTATCCTACTACTGC+TGG - chr1_4:19723888-19723907 None:intergenic 35.0%
TAATCTGGTGGAATTGCAAA+CGG - chr1_4:19723920-19723939 None:intergenic 35.0%
CAATTCCACCAGATTATACT+TGG + chr1_4:19723924-19723943 Msa0154920:CDS 35.0%
ATATGGCAGCTTCTATTCAA+TGG - chr1_4:19724044-19724063 None:intergenic 35.0%
TAGAAGCTGCCATATTTGTT+TGG + chr1_4:19724049-19724068 Msa0154920:three_prime_UTR 35.0%
ATATGGCAGCTTCTATTCAA+TGG - chr1_4:19724044-19724063 None:intergenic 35.0%
TAGAAGCTGCCATATTTGTT+TGG + chr1_4:19724049-19724068 Msa0154920:three_prime_UTR 35.0%
CACCAAAGGAAGAAAGAAAG+AGG - chr1_4:19718591-19718610 None:intergenic 40.0%
CTCTTTCTTTCTTCCTTTGG+TGG + chr1_4:19718589-19718608 Msa0154920:five_prime_UTR 40.0%
CTTTCTTTCTTCCTTTGGTG+GGG + chr1_4:19718591-19718610 Msa0154920:five_prime_UTR 40.0%
GTTTGAGAGAGAGAAAGAGA+GGG - chr1_4:19718639-19718658 None:intergenic 40.0%
TGTTTGAGAGAGAGAAAGAG+AGG - chr1_4:19718640-19718659 None:intergenic 40.0%
CATTGGACAAACCAAAACCA+AGG + chr1_4:19718892-19718911 Msa0154920:five_prime_UTR 40.0%
!!! ATAGGTACCTTTTTCAGTGC+TGG + chr1_4:19719078-19719097 Msa0154920:five_prime_UTR 40.0%
! AATCCAACCAGCACTGAAAA+AGG - chr1_4:19719088-19719107 None:intergenic 40.0%
! AAAATCACAGCCTTATGCAC+AGG - chr1_4:19719276-19719295 None:intergenic 40.0%
! GCATAAGGCTGTGATTTTGA+AGG + chr1_4:19719278-19719297 Msa0154920:CDS 40.0%
AGGATTATGGTGAGCTTAAG+AGG + chr1_4:19719298-19719317 Msa0154920:CDS 40.0%
GTGAGCTTAAGAGGATACTT+GGG + chr1_4:19719307-19719326 Msa0154920:CDS 40.0%
TGAGCTTAAGAGGATACTTG+GGG + chr1_4:19719308-19719327 Msa0154920:CDS 40.0%
TAATGTGGGTGAGATTCGTA+CGG + chr1_4:19719347-19719366 Msa0154920:CDS 40.0%
CAATCTCTGCTGTGATTGAT+AGG + chr1_4:19719406-19719425 Msa0154920:CDS 40.0%
GCTGAAATGCTTATGGTTGT+TGG + chr1_4:19719492-19719511 Msa0154920:CDS 40.0%
!! TTATGGTTGTTGGTGCTGAT+TGG + chr1_4:19719502-19719521 Msa0154920:CDS 40.0%
TGGAGTTTGCAGAATGAACA+AGG + chr1_4:19719522-19719541 Msa0154920:CDS 40.0%
GGAGTTTGCAGAATGAACAA+GGG + chr1_4:19719523-19719542 Msa0154920:CDS 40.0%
GGTGCAATCCTTGAAATGAA+AGG - chr1_4:19719732-19719751 None:intergenic 40.0%
!!! TTTTCTTGGTGATGGTTCAG+AGG + chr1_4:19719857-19719876 Msa0154920:CDS 40.0%
CATGATCTCACACAAGGAAA+AGG + chr1_4:19719908-19719927 Msa0154920:CDS 40.0%
!!! TCTAGATGATGCTGCTTTTG+CGG + chr1_4:19719944-19719963 Msa0154920:CDS 40.0%
! TTCTTTTGCCTCAGTTGACT+TGG + chr1_4:19720051-19720070 Msa0154920:CDS 40.0%
! CTACCATTTCTGTTTTCTCC+TGG - chr1_4:19720082-19720101 None:intergenic 40.0%
CAGGAGAAAACAGAAATGGT+AGG + chr1_4:19720080-19720099 Msa0154920:CDS 40.0%
CGAAGATGAAAGAAGGCAAT+TGG + chr1_4:19720250-19720269 Msa0154920:CDS 40.0%
AGATGAAAGAAGGCAATTGG+AGG + chr1_4:19720253-19720272 Msa0154920:CDS 40.0%
CTACCGTTACCATCTTCAAT+AGG - chr1_4:19720362-19720381 None:intergenic 40.0%
CAGGAAAAGAAAGGATGGTT+TGG + chr1_4:19720401-19720420 Msa0154920:CDS 40.0%
! GAAAAGAAAGGATGGTTTGG+TGG + chr1_4:19720404-19720423 Msa0154920:CDS 40.0%
TCTACGCAAAGAGAACTTCT+TGG - chr1_4:19720482-19720501 None:intergenic 40.0%
ATTCTGTTGAGGTTGTTGTG+AGG + chr1_4:19720564-19720583 Msa0154920:CDS 40.0%
TTCTGTTGAGGTTGTTGTGA+GGG + chr1_4:19720565-19720584 Msa0154920:CDS 40.0%
AGCAGAAGTCGTCATAAAGA+TGG + chr1_4:19720644-19720663 Msa0154920:CDS 40.0%
AAGGATTGAGGCCTATTCTT+TGG + chr1_4:19720690-19720709 Msa0154920:CDS 40.0%
TTTGGCGAAAGCCAAAGAAT+AGG - chr1_4:19720704-19720723 None:intergenic 40.0%
TGCATGCTACAGCATAAGTA+GGG - chr1_4:19720985-19721004 None:intergenic 40.0%
ATGCATGCTACAGCATAAGT+AGG - chr1_4:19720986-19721005 None:intergenic 40.0%
! ACCACCTTAATCTGAAGTGT+CGG + chr1_4:19721126-19721145 Msa0154920:intron 40.0%
ATATCATGCATGCCATGTGT+TGG + chr1_4:19721155-19721174 Msa0154920:intron 40.0%
!! CCTATGGATTAGGAACATGT+GGG + chr1_4:19721178-19721197 Msa0154920:intron 40.0%
ATAGACAGAGAAAAGGGGTA+AGG + chr1_4:19721223-19721242 Msa0154920:intron 40.0%
TAGACAGAGAAAAGGGGTAA+GGG + chr1_4:19721224-19721243 Msa0154920:intron 40.0%
TAGAAGAGTAGGTGTGTTCT+TGG + chr1_4:19721276-19721295 Msa0154920:intron 40.0%
AGAAGAGTAGGTGTGTTCTT+GGG + chr1_4:19721277-19721296 Msa0154920:intron 40.0%
AGCTAAAAGTGGTAAAGGTG+AGG - chr1_4:19721414-19721433 None:intergenic 40.0%
!! AAACATCGGTGCTACAAGTT+GGG - chr1_4:19721461-19721480 None:intergenic 40.0%
!! AAAACATCGGTGCTACAAGT+TGG - chr1_4:19721462-19721481 None:intergenic 40.0%
!!! CTTGTAGCACCGATGTTTTA+TGG + chr1_4:19721463-19721482 Msa0154920:intron 40.0%
! ACCGATGTTTTATGGGTATG+CGG + chr1_4:19721471-19721490 Msa0154920:intron 40.0%
ACCGCATACCCATAAAACAT+CGG - chr1_4:19721475-19721494 None:intergenic 40.0%
TGGGTATGCGGTAAAATTAG+TGG + chr1_4:19721483-19721502 Msa0154920:intron 40.0%
TCTTGCTCCAGAATATTGTC+TGG + chr1_4:19721949-19721968 Msa0154920:intron 40.0%
CAATGCAAACAAGAAACAGC+AGG - chr1_4:19722069-19722088 None:intergenic 40.0%
!! GTGAGTTCTTTTTCACGTAG+AGG + chr1_4:19722217-19722236 Msa0154920:intron 40.0%
!!! CACTCACGAGTTTTGGTTTT+CGG - chr1_4:19722335-19722354 None:intergenic 40.0%
AACCAAAACTCGTGAGTGAA+TGG + chr1_4:19722337-19722356 Msa0154920:intron 40.0%
! TTCCATTCACTCACGAGTTT+TGG - chr1_4:19722342-19722361 None:intergenic 40.0%
AAACCCTAGAATGTGTAGGA+AGG - chr1_4:19722765-19722784 None:intergenic 40.0%
! CAATGCATTTTTCCATGTGG+TGG + chr1_4:19723542-19723561 Msa0154920:intron 40.0%
!!! TTTTAAAACCCTCCACCACA+TGG - chr1_4:19723557-19723576 None:intergenic 40.0%
GTGACTCTTTCTGCATATTC+AGG + chr1_4:19723658-19723677 Msa0154920:intron 40.0%
! GGTGTTGCGAATTCATCTAA+TGG - chr1_4:19723749-19723768 None:intergenic 40.0%
AATCTGGTGGAATTGCAAAC+GGG - chr1_4:19723919-19723938 None:intergenic 40.0%
ATGATCTCACTTCACTTCAG+TGG + chr1_4:19724018-19724037 Msa0154920:exon 40.0%
GCTAGGATTTGATTCTCCAA+TGG + chr1_4:19724135-19724154 Msa0154920:three_prime_UTR 40.0%
TGTTGTGCTGCAGCATAAAA+GGG + chr1_4:19724158-19724177 Msa0154920:three_prime_UTR 40.0%
AAAGAGAGAAACCCCACCAA+AGG - chr1_4:19718605-19718624 None:intergenic 45.0%
CAATCCAGATCAGACAAGCA+TGG - chr1_4:19718789-19718808 None:intergenic 45.0%
CATGCTTGTCTGATCTGGAT+TGG + chr1_4:19718787-19718806 Msa0154920:five_prime_UTR 45.0%
! CTGATCTGGATTGGATCACA+AGG + chr1_4:19718796-19718815 Msa0154920:five_prime_UTR 45.0%
!!! GTACCTTTTTCAGTGCTGGT+TGG + chr1_4:19719082-19719101 Msa0154920:five_prime_UTR 45.0%
CAAGTTTGTGGTGACCCTAT+TGG + chr1_4:19719114-19719133 Msa0154920:five_prime_UTR 45.0%
!! ATCCATCCCTTGTGCTGTTT+AGG + chr1_4:19719213-19719232 Msa0154920:five_prime_UTR 45.0%
TACCTAAACAGCACAAGGGA+TGG - chr1_4:19719218-19719237 None:intergenic 45.0%
!! TCCCTTGTGCTGTTTAGGTA+TGG + chr1_4:19719218-19719237 Msa0154920:exon 45.0%
GCCATACCTAAACAGCACAA+GGG - chr1_4:19719222-19719241 None:intergenic 45.0%
TGCCATACCTAAACAGCACA+AGG - chr1_4:19719223-19719242 None:intergenic 45.0%
!! TTGTGCTGTTTAGGTATGGC+AGG + chr1_4:19719222-19719241 Msa0154920:exon 45.0%
!! TGTGCTGTTTAGGTATGGCA+GGG + chr1_4:19719223-19719242 Msa0154920:exon 45.0%
GGGATCGATGTTGCAAAGTT+TGG + chr1_4:19719243-19719262 Msa0154920:CDS 45.0%
TGGTCATAGTCCTGTGCATA+AGG + chr1_4:19719263-19719282 Msa0154920:CDS 45.0%
GGTGAGCTTAAGAGGATACT+TGG + chr1_4:19719306-19719325 Msa0154920:CDS 45.0%
GAGCTTAAGAGGATACTTGG+GGG + chr1_4:19719309-19719328 Msa0154920:CDS 45.0%
TCACCCACATTACACAGCTT+AGG - chr1_4:19719339-19719358 None:intergenic 45.0%
! GGAAGCGGTTTCGATTTTAG+AGG + chr1_4:19719368-19719387 Msa0154920:CDS 45.0%
!! TGAAGAGGAGTATCGCGATT+CGG - chr1_4:19719441-19719460 None:intergenic 45.0%
GTTTGCAGAATGAACAAGGG+TGG + chr1_4:19719526-19719545 Msa0154920:CDS 45.0%
AGCATTATCAGCCTCTTGCT+TGG + chr1_4:19719607-19719626 Msa0154920:CDS 45.0%
GCATTATCAGCCTCTTGCTT+GGG + chr1_4:19719608-19719627 Msa0154920:CDS 45.0%
CTTGGGCAAAATGGTGTAGA+AGG + chr1_4:19719625-19719644 Msa0154920:CDS 45.0%
! GAAAAGGGGTGCGAATCTAA+GGG + chr1_4:19719773-19719792 Msa0154920:CDS 45.0%
TCTAAGGGCTGACATGACTT+TGG + chr1_4:19719788-19719807 Msa0154920:CDS 45.0%
!! ATGACTTTGGCTGGTTTCGA+CGG + chr1_4:19719801-19719820 Msa0154920:CDS 45.0%
!! TTGGTGATGGTTCAGAGGAT+GGG + chr1_4:19719862-19719881 Msa0154920:CDS 45.0%
TGAGATCATGCAGAGTGATC+CGG - chr1_4:19719898-19719917 None:intergenic 45.0%
ACTCTGCATGATCTCACACA+AGG + chr1_4:19719902-19719921 Msa0154920:CDS 45.0%
GATCTCACACAAGGAAAAGG+AGG + chr1_4:19719911-19719930 Msa0154920:CDS 45.0%
!! GCCTGGTATTGATGTTACTC+AGG + chr1_4:19720025-19720044 Msa0154920:CDS 45.0%
GCCTGAGTAACATCAATACC+AGG - chr1_4:19720029-19720048 None:intergenic 45.0%
!!! TTTTGCCTCAGTTGACTTGG+AGG + chr1_4:19720054-19720073 Msa0154920:CDS 45.0%
GGTAGGATCTTGGAAAGCTA+AGG + chr1_4:19720097-19720116 Msa0154920:CDS 45.0%
ATTGGAGGATGCACTTAAGC+TGG + chr1_4:19720268-19720287 Msa0154920:CDS 45.0%
!! GATGGTAACGGTAGCAATAG+TGG + chr1_4:19720368-19720387 Msa0154920:CDS 45.0%
!! AGAAAGGATGGTTTGGTGGA+TGG + chr1_4:19720408-19720427 Msa0154920:CDS 45.0%
ACGCAAAGAGAACTTCTTGG+TGG - chr1_4:19720479-19720498 None:intergenic 45.0%
TCTGTTGAGGTTGTTGTGAG+GGG + chr1_4:19720566-19720585 Msa0154920:CDS 45.0%
! TAACGTGTCGATGTTGTGTC+TGG - chr1_4:19721032-19721051 None:intergenic 45.0%
ACCGACACTTCAGATTAAGG+TGG - chr1_4:19721130-19721149 None:intergenic 45.0%
!! AGCACCGACACTTCAGATTA+AGG - chr1_4:19721133-19721152 None:intergenic 45.0%
CTAATCCATAGGCCAACACA+TGG - chr1_4:19721170-19721189 None:intergenic 45.0%
! CATGTGTTGGCCTATGGATT+AGG + chr1_4:19721168-19721187 Msa0154920:intron 45.0%
!! GCCTATGGATTAGGAACATG+TGG + chr1_4:19721177-19721196 Msa0154920:intron 45.0%
CCCACATGTTCCTAATCCAT+AGG - chr1_4:19721181-19721200 None:intergenic 45.0%
! GCAAGGGCATAAGCTAAAAG+TGG - chr1_4:19721425-19721444 None:intergenic 45.0%
GGGTAGTAAAGAGCTAGCAA+GGG - chr1_4:19721441-19721460 None:intergenic 45.0%
TGGGTAGTAAAGAGCTAGCA+AGG - chr1_4:19721442-19721461 None:intergenic 45.0%
!! TTCTGGAGCAAGAAGAGTAG+TGG - chr1_4:19721942-19721961 None:intergenic 45.0%
GGTAATAAGTGGGAGAGTAG+TGG - chr1_4:19722012-19722031 None:intergenic 45.0%
! GTAGAGGAGTGTGCTTTAAG+AGG + chr1_4:19722233-19722252 Msa0154920:intron 45.0%
GAAGCTACTGAATCCAGGAA+AGG - chr1_4:19722532-19722551 None:intergenic 45.0%
!! ATACATCTCTTGGGCTAGCT+TGG + chr1_4:19723363-19723382 Msa0154920:intron 45.0%
!! TTGGGCTAGCTTGGTCTTAT+TGG + chr1_4:19723372-19723391 Msa0154920:intron 45.0%
! TGCATTTTTCCATGTGGTGG+AGG + chr1_4:19723545-19723564 Msa0154920:intron 45.0%
!! GCATTTTTCCATGTGGTGGA+GGG + chr1_4:19723546-19723565 Msa0154920:intron 45.0%
!! TATTCAGGTTGCCATTCCTG+TGG + chr1_4:19723673-19723692 Msa0154920:intron 45.0%
GTGACCAATACTCTGATGGT+GGG - chr1_4:19723701-19723720 None:intergenic 45.0%
AGTGACCAATACTCTGATGG+TGG - chr1_4:19723702-19723721 None:intergenic 45.0%
CAGAGAAATTTGTCGCTGCA+GGG - chr1_4:19723805-19723824 None:intergenic 45.0%
CTGCTTCATCTTGGTTTCAG+TGG + chr1_4:19723822-19723841 Msa0154920:CDS 45.0%
AACCTGCAGCAGATGAACTA+GGG - chr1_4:19723865-19723884 None:intergenic 45.0%
GTGACCCAAGTATAATCTGG+TGG - chr1_4:19723932-19723951 None:intergenic 45.0%
GCAGTGACCCAAGTATAATC+TGG - chr1_4:19723935-19723954 None:intergenic 45.0%
TGGATCTCACTTCACTTCAG+TGG + chr1_4:19724069-19724088 Msa0154920:three_prime_UTR 45.0%
GTGTTGTGCTGCAGCATAAA+AGG + chr1_4:19724157-19724176 Msa0154920:three_prime_UTR 45.0%
!! ATAAATAAATAAATACAAAA+GGG - chr1_4:19718695-19718714 None:intergenic 5.0%
!! AATAAATAAATAAATACAAA+AGG - chr1_4:19718696-19718715 None:intergenic 5.0%
CTCTCCATGCTTGTCTGATC+TGG + chr1_4:19718782-19718801 Msa0154920:five_prime_UTR 50.0%
CAAGTGGGGTCACAGATCAA+GGG - chr1_4:19718955-19718974 None:intergenic 50.0%
TCAAGTGGGGTCACAGATCA+AGG - chr1_4:19718956-19718975 None:intergenic 50.0%
TCGCGATACTCCTCTTCACT+TGG + chr1_4:19719443-19719462 Msa0154920:CDS 50.0%
AGCGGCTGCTGAAATGCTTA+TGG + chr1_4:19719485-19719504 Msa0154920:CDS 50.0%
AGCCTCTTGCTTGGGCAAAA+TGG + chr1_4:19719616-19719635 Msa0154920:CDS 50.0%
! CACCATTTTGCCCAAGCAAG+AGG - chr1_4:19719621-19719640 None:intergenic 50.0%
GTGTAGAAGGTTGCCTCGTT+TGG + chr1_4:19719638-19719657 Msa0154920:CDS 50.0%
! GGAAAAGGGGTGCGAATCTA+AGG + chr1_4:19719772-19719791 Msa0154920:CDS 50.0%
!! CTTGGTGATGGTTCAGAGGA+TGG + chr1_4:19719861-19719880 Msa0154920:CDS 50.0%
GAGATCATGCAGAGTGATCC+GGG - chr1_4:19719897-19719916 None:intergenic 50.0%
GCGCCAGGAGAAAACAGAAA+TGG + chr1_4:19720076-19720095 Msa0154920:CDS 50.0%
TCATCGTCTGTCATAGCTCC+AGG - chr1_4:19720170-19720189 None:intergenic 50.0%
ACCAGGGAGACATTCTGTTG+AGG + chr1_4:19720553-19720572 Msa0154920:CDS 50.0%
ACCTCAACAGAATGTCTCCC+TGG - chr1_4:19720557-19720576 None:intergenic 50.0%
!! GAGCAAGCACTGACCTTAAC+AGG - chr1_4:19720842-19720861 None:intergenic 50.0%
CTAAGCAGTCAGCACAAAGG+AGG - chr1_4:19721806-19721825 None:intergenic 50.0%
GAGCTAAGCAGTCAGCACAA+AGG - chr1_4:19721809-19721828 None:intergenic 50.0%
TGCAGGAAGCTACTGAATCC+AGG - chr1_4:19722537-19722556 None:intergenic 50.0%
GGTTCCCACCATCAGAGTAT+TGG + chr1_4:19723694-19723713 Msa0154920:CDS 50.0%
! CCTGACATGGATGGACTTGT+CGG - chr1_4:19723773-19723792 None:intergenic 50.0%
GCAGAGAAATTTGTCGCTGC+AGG - chr1_4:19723806-19723825 None:intergenic 50.0%
GAACCTGCAGCAGATGAACT+AGG - chr1_4:19723866-19723885 None:intergenic 50.0%
ATGCTGCAGCACAACACCAT+TGG - chr1_4:19724154-19724173 None:intergenic 50.0%
GGGTGAGATTCGTACGGAAG+CGG + chr1_4:19719353-19719372 Msa0154920:CDS 55.0%
CACATCGTCGCTACCAAACG+AGG - chr1_4:19719654-19719673 None:intergenic 55.0%
!! CTCGTTTGGTAGCGACGATG+TGG + chr1_4:19719652-19719671 Msa0154920:CDS 55.0%
!! GTTTGGTAGCGACGATGTGG+AGG + chr1_4:19719655-19719674 Msa0154920:CDS 55.0%
AGGGCTGACATGACTTTGGC+TGG + chr1_4:19719792-19719811 Msa0154920:CDS 55.0%
TTGTGAGGGGCGATGAGCAA+CGG + chr1_4:19720579-19720598 Msa0154920:CDS 55.0%
! GCATGCCATGTGTTGGCCTA+TGG + chr1_4:19721162-19721181 Msa0154920:intron 55.0%
!! GATGGTGGGAACCACAGGAA+TGG - chr1_4:19723687-19723706 None:intergenic 55.0%
!! ACTCTGATGGTGGGAACCAC+AGG - chr1_4:19723692-19723711 None:intergenic 55.0%
! GACATGGATGGACTTGTCGG+CGG - chr1_4:19723770-19723789 None:intergenic 55.0%
CCGACAAGTCCATCCATGTC+AGG + chr1_4:19723770-19723789 Msa0154920:CDS 55.0%
CTCTCTTCGCCTGACATGGA+TGG - chr1_4:19723782-19723801 None:intergenic 55.0%
GCAGATGAACTAGGGCGGTA+TGG - chr1_4:19723857-19723876 None:intergenic 55.0%
CTGCAGCAGATGAACTAGGG+CGG - chr1_4:19723862-19723881 None:intergenic 55.0%
CTGCAGGTTCCAGCAGTAGT+AGG + chr1_4:19723876-19723895 Msa0154920:CDS 55.0%
GGTGGAATTGCAAACGGGTC+TGG - chr1_4:19723914-19723933 None:intergenic 55.0%
GAGGATGGGAAAGTCCAGCC+CGG + chr1_4:19719876-19719895 Msa0154920:CDS 60.0%
TCATGCAGAGTGATCCGGGC+TGG - chr1_4:19719893-19719912 None:intergenic 60.0%
TGGCGCCTCCAAGTCAACTG+AGG - chr1_4:19720062-19720081 None:intergenic 60.0%
!! TCAGTTGACTTGGAGGCGCC+AGG + chr1_4:19720061-19720080 Msa0154920:CDS 60.0%
AGGGCTCTCTTCGCCTGACA+TGG - chr1_4:19723786-19723805 None:intergenic 60.0%
CGCCCTAGTTCATCTGCTGC+AGG + chr1_4:19723860-19723879 Msa0154920:CDS 60.0%
TGAGGGGCGATGAGCAACGG+AGG + chr1_4:19720582-19720601 Msa0154920:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 19718533 19724387 19718533 ID=Msa0154920;Name=Msa0154920
chr1_4 mRNA 19718533 19724387 19718533 ID=Msa0154920-mRNA-1;Parent=Msa0154920;Name=Msa0154920-mRNA-1;_AED=0.02;_eAED=0.02;_QI=549|1|1|1|0.5|0.33|3|366|650
chr1_4 exon 19718533 19718913 19718533 ID=Msa0154920-mRNA-1:exon:7236;Parent=Msa0154920-mRNA-1
chr1_4 exon 19719069 19720847 19719069 ID=Msa0154920-mRNA-1:exon:7237;Parent=Msa0154920-mRNA-1
chr1_4 exon 19723680 19724387 19723680 ID=Msa0154920-mRNA-1:exon:7238;Parent=Msa0154920-mRNA-1
chr1_4 five_prime_UTR 19718533 19718913 19718533 ID=Msa0154920-mRNA-1:five_prime_utr;Parent=Msa0154920-mRNA-1
chr1_4 five_prime_UTR 19719069 19719236 19719069 ID=Msa0154920-mRNA-1:five_prime_utr;Parent=Msa0154920-mRNA-1
chr1_4 CDS 19719237 19720847 19719237 ID=Msa0154920-mRNA-1:cds;Parent=Msa0154920-mRNA-1
chr1_4 CDS 19723680 19724021 19723680 ID=Msa0154920-mRNA-1:cds;Parent=Msa0154920-mRNA-1
chr1_4 three_prime_UTR 19724022 19724387 19724022 ID=Msa0154920-mRNA-1:three_prime_utr;Parent=Msa0154920-mRNA-1
Gene Sequence

>Msa0154920

ATGGCAGGGATCGATGTTGCAAAGTTTGGTCATAGTCCTGTGCATAAGGCTGTGATTTTGAAGGATTATGGTGAGCTTAAGAGGATACTTGGGGGTTTACCTAAGCTGTGTAATGTGGGTGAGATTCGTACGGAAGCGGTTTCGATTTTAGAGGAAGAGAAGGCTGATGCAATCTCTGCTGTGATTGATAGGCGTGATGTGCCGAATCGCGATACTCCTCTTCACTTGGCTGTTAAATTAGGGGATGAAGCGGCTGCTGAAATGCTTATGGTTGTTGGTGCTGATTGGAGTTTGCAGAATGAACAAGGGTGGAGTGCTCTTCAAGAAGCTATTTGCAGTCGAGAAGAGCGTATTGCAAAGATTATAATTAAGCATTATCAGCCTCTTGCTTGGGCAAAATGGTGTAGAAGGTTGCCTCGTTTGGTAGCGACGATGTGGAGGATGAGAGACTTTTATATGGAGATTACTTTCAATTTCGAGAGTTCTGTGATACCTTTCATTTCAAGGATTGCACCTTCAGACACTTACAAGATTTGGAAAAGGGGTGCGAATCTAAGGGCTGACATGACTTTGGCTGGTTTCGACGGTTTTAGAATTCAGAGATCAGATCAAAGTGTTCTTTTTCTTGGTGATGGTTCAGAGGATGGGAAAGTCCAGCCCGGATCACTCTGCATGATCTCACACAAGGAAAAGGAGGTACTTAATGCTCTAGATGATGCTGCTTTTGCGGCAAATGATGAAGAAGTTCAGCAAGAAGTAGCTGCAATGTCTAAAACAAATATATTTAGGCCTGGTATTGATGTTACTCAGGCAGTTCTTTTGCCTCAGTTGACTTGGAGGCGCCAGGAGAAAACAGAAATGGTAGGATCTTGGAAAGCTAAGGTGTATGATATACACAATGTTGTTGTAAGTATAAAATCTAGAGGAGTTCCTGGAGCTATGACAGACGATGAGTTATTCTCGTCTTGCAATGAAAATGAAACCGAGAGTGAAGAACTTAACGATATTTTGACCGAAGATGAAAGAAGGCAATTGGAGGATGCACTTAAGCTGGATTCGTCAGAACTGAACAATGATAGTGATGAGGGGATCATTGCGCATCGTCCAAGCTTTAGAGACATTCCTATTGAAGATGGTAACGGTAGCAATAGTGGAGAAAATAAGCAGGAAAAGAAAGGATGGTTTGGTGGATGGAGAAAAAAAGATTATAAACATGAAGCAGCGTCGAAGAAGTTTACACCACCAAGAAGTTCTCTTTGCGTAGATGAAAAGGTGAGCGATTTATTGGGAGATTCTCCTTCAAATAATCAGATTAAACCAGGGAGACATTCTGTTGAGGTTGTTGTGAGGGGCGATGAGCAACGGAGGAAAAAAGATGCCAAAGCTTCTTCTGTAAATTCTGATAGCAGCAGAAGTCGTCATAAAGATGGAAGTCGTGAAAATGAATATAAGAAAGGATTGAGGCCTATTCTTTGGCTTTCGCCAAACTTTCCATTAAAAATTGAAGAACTCTTGCCATTACTTGACATTGTTGCAAACAAAGTTAAAGCAATTCGACGATTAAGAGAATTACTTACAACAAAACTTCCAATGGGAACTTTTCCTGTTAAGGTTGCCATTCCTGTGGTTCCCACCATCAGAGTATTGGTCACTTTTACAAAGTTTGAAGAACTTCAGCCATTAGATGAATTCGCAACACCGCCGACAAGTCCATCCATGTCAGGCGAAGAGAGCCCTGCAGCGACAAATTTCTCTGCTTCATCTTGGTTTCAGTGGATAAAGGCTCCATACCGCCCTAGTTCATCTGCTGCAGGTTCCAGCAGTAGTAGGATAGAAAATATTCCAGACCCGTTTGCAATTCCACCAGATTATACTTGGGTCACTGCTGAAGAAAAGAAGAAAAAGATGCAAGAGAAGAACAAATCAAAGAAAGGGAAAAGTCATAAACAATGA

Protein sequence

>Msa0154920

MAGIDVAKFGHSPVHKAVILKDYGELKRILGGLPKLCNVGEIRTEAVSILEEEKADAISAVIDRRDVPNRDTPLHLAVKLGDEAAAEMLMVVGADWSLQNEQGWSALQEAICSREERIAKIIIKHYQPLAWAKWCRRLPRLVATMWRMRDFYMEITFNFESSVIPFISRIAPSDTYKIWKRGANLRADMTLAGFDGFRIQRSDQSVLFLGDGSEDGKVQPGSLCMISHKEKEVLNALDDAAFAANDEEVQQEVAAMSKTNIFRPGIDVTQAVLLPQLTWRRQEKTEMVGSWKAKVYDIHNVVVSIKSRGVPGAMTDDELFSSCNENETESEELNDILTEDERRQLEDALKLDSSELNNDSDEGIIAHRPSFRDIPIEDGNGSNSGENKQEKKGWFGGWRKKDYKHEAASKKFTPPRSSLCVDEKVSDLLGDSPSNNQIKPGRHSVEVVVRGDEQRRKKDAKASSVNSDSSRSRHKDGSRENEYKKGLRPILWLSPNFPLKIEELLPLLDIVANKVKAIRRLRELLTTKLPMGTFPVKVAIPVVPTIRVLVTFTKFEELQPLDEFATPPTSPSMSGEESPAATNFSASSWFQWIKAPYRPSSSAAGSSSSRIENIPDPFAIPPDYTWVTAEEKKKKMQEKNKSKKGKSHKQ*