Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182620 | XP_013443993.1 | 99.387 | 326 | 0 | 1 | 1 | 326 | 1 | 324 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182620 | sp|Q15428|SF3A2_HUMAN | 69.811 | 212 | 64 | 0 | 6 | 217 | 8 | 219 | 1.04e-92 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182620 | A0A072TWV3 | 99.387 | 326 | 0 | 1 | 1 | 326 | 1 | 324 | 0.0 | 643 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1075220 | Msa1182620 | 0.813516 | 2.460486e-51 | -8.615850e-47 |
| Msa1116130 | Msa1182620 | 0.809930 | 1.483005e-50 | -8.615850e-47 |
| Msa1139000 | Msa1182620 | 0.821577 | 3.750816e-53 | -8.615850e-47 |
| Msa1162550 | Msa1182620 | 0.816272 | 6.024690e-52 | -8.615850e-47 |
| Msa1182620 | Msa1272540 | 0.895881 | 6.287804e-76 | -8.615850e-47 |
| Msa1182620 | Msa1295540 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa1182620 | Msa1386750 | -0.802210 | 6.251026e-49 | -8.615850e-47 |
| Msa1182620 | Msa1407640 | 0.825288 | 5.086355e-54 | -8.615850e-47 |
| Msa0930830 | Msa1182620 | 0.835039 | 2.116172e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182620 | MtrunA17_Chr8g0337441 | 99.387 | 326 | 0 | 1 | 1 | 326 | 1 | 324 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182620 | AT2G32600.1 | 85.153 | 229 | 33 | 1 | 1 | 229 | 1 | 228 | 6.16e-137 | 389 |
Find 130 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGTGGTTTGGTTGCCTC+TGG | 0.189969 | 8_1:-17739648 | None:intergenic |
| GGTAGTGGAGCTTGTGGTGG+TGG | 0.222430 | 8_1:-17739729 | None:intergenic |
| CTCCTTTACCTTGATATAGA+TGG | 0.237440 | 8_1:+17740184 | Msa1182620:three_prime_UTR |
| GCCAGTAACTGTTTGATTAC+AGG | 0.240484 | 8_1:+17740222 | Msa1182620:three_prime_UTR |
| GAGATGATTGCGCATGAAAT+AGG | 0.265040 | 8_1:-17736934 | None:intergenic |
| TCCTGTAATCAAACAGTTAC+TGG | 0.277371 | 8_1:-17740223 | None:intergenic |
| GATGCAATGAACAGGCAATT+TGG | 0.289926 | 8_1:-17740071 | None:intergenic |
| GTGGCGGCTCCGCCACTTCC+TGG | 0.292360 | 8_1:-17736834 | None:intergenic |
| ATGCAATGAACAGGCAATTT+GGG | 0.298212 | 8_1:-17740070 | None:intergenic |
| TGCTACTATCTCTTTGAAAC+TGG | 0.316413 | 8_1:-17736740 | None:intergenic |
| TATCTCTTTGAAACTGGAAT+TGG | 0.321267 | 8_1:-17736734 | None:intergenic |
| AGAGATCTTTGCTTCGTATC+AGG | 0.325334 | 8_1:-17737284 | None:intergenic |
| TGCCCTAGCTCTGCATTTGT+TGG | 0.330972 | 8_1:-17739968 | None:intergenic |
| AACGAGAACAAACCTGAAAA+AGG | 0.332371 | 8_1:-17737307 | None:intergenic |
| AGCAGCACGTTTAGCGAGAT+TGG | 0.337514 | 8_1:-17737042 | None:intergenic |
| TTATGAAACAATTTCTTTCA+AGG | 0.340909 | 8_1:+17739260 | Msa1182620:CDS |
| GCTGTGGTTTGGTTGCCTCT+GGG | 0.347044 | 8_1:-17739647 | None:intergenic |
| ACTGTGAACATCTTTGAATC+TGG | 0.349285 | 8_1:-17739448 | None:intergenic |
| CCTTGTGGAGGTGGCATTGA+TGG | 0.350354 | 8_1:-17739936 | None:intergenic |
| ATATTAACCTTCCTCTTATG+AGG | 0.352776 | 8_1:-17737098 | None:intergenic |
| AGGTTGAGTAGGAGCATCTT+TGG | 0.360910 | 8_1:-17737072 | None:intergenic |
| GTAGTGGAGCTTGTGGTGGT+GGG | 0.364814 | 8_1:-17739728 | None:intergenic |
| GCTACCTCCCGGCGCACCTA+TGG | 0.367211 | 8_1:+17739776 | Msa1182620:CDS |
| TTGAAAGAAATTGTTTCATA+AGG | 0.372951 | 8_1:-17739258 | None:intergenic |
| CCTTGTGGAGGTGGTGGTGG+TGG | 0.384448 | 8_1:-17739753 | None:intergenic |
| AGCCCTTGTGGAGGTGGTGG+TGG | 0.387371 | 8_1:-17739756 | None:intergenic |
| CCACCTGCCTCTGCACCTAA+TGG | 0.401178 | 8_1:+17739669 | Msa1182620:CDS |
| GGGGCTGGCGGTGGAAGAGG+CGG | 0.403510 | 8_1:-17739897 | None:intergenic |
| TGTGGAGGTGGTGGTGGTGG+TGG | 0.404383 | 8_1:-17739750 | None:intergenic |
| GGTAGCCCTTGTGGAGGTGG+TGG | 0.404676 | 8_1:-17739759 | None:intergenic |
| GACTTATCAATTTCTGTGCT+TGG | 0.408241 | 8_1:-17739397 | None:intergenic |
| AAGGTTAATATGAAGAAATC+TGG | 0.412592 | 8_1:+17737110 | Msa1182620:CDS |
| CTGTGGTTTGGTTGCCTCTG+GGG | 0.413045 | 8_1:-17739646 | None:intergenic |
| AGTGGAGCTTGTGGTGGTGG+GGG | 0.417612 | 8_1:-17739726 | None:intergenic |
| AGATGATTGCGCATGAAATA+GGG | 0.419841 | 8_1:-17736933 | None:intergenic |
| TAGCTCTGCATTTGTTGGCC+TGG | 0.421194 | 8_1:-17739963 | None:intergenic |
| AACAACAATGGACAGAGAAT+GGG | 0.425908 | 8_1:+17736803 | Msa1182620:exon |
| CAGTTAAGATTGGGAGGCCT+GGG | 0.428678 | 8_1:+17737237 | Msa1182620:intron |
| GCCCCTCCACCTCCAATGTC+AGG | 0.429502 | 8_1:+17739813 | Msa1182620:CDS |
| TGTGGTTTGGTTGCCTCTGG+GGG | 0.431042 | 8_1:-17739645 | None:intergenic |
| CCAGGTGCTGTGGTGCCATT+AGG | 0.431539 | 8_1:-17739684 | None:intergenic |
| TTTGCGAGGTCTTCGATCTC+AGG | 0.436901 | 8_1:-17738999 | None:intergenic |
| GGAGGTAGCCCTTGTGGAGG+TGG | 0.439056 | 8_1:-17739762 | None:intergenic |
| CATTGATGTATCAAGTTGTC+TGG | 0.439794 | 8_1:+17740120 | Msa1182620:three_prime_UTR |
| TTAAAAGTGTACCTGCTCAT+AGG | 0.440818 | 8_1:-17739045 | None:intergenic |
| CAACAACAATGGACAGAGAA+TGG | 0.445279 | 8_1:+17736802 | Msa1182620:exon |
| GGTGCAGAGGCAGGTGGCTG+TGG | 0.447431 | 8_1:-17739663 | None:intergenic |
| TCCTTTACCTTGATATAGAT+GGG | 0.448712 | 8_1:+17740185 | Msa1182620:three_prime_UTR |
| CAGCTGCAAACAATAGATAC+TGG | 0.457637 | 8_1:-17739233 | None:intergenic |
| AGAGGCAGGTGGCTGTGGTT+TGG | 0.459653 | 8_1:-17739658 | None:intergenic |
| ACCTTCCTCTTATGAGGCTG+AGG | 0.459821 | 8_1:-17737092 | None:intergenic |
| GCAGTTAAGATTGGGAGGCC+TGG | 0.462876 | 8_1:+17737236 | Msa1182620:intron |
| CTCAACCTCAGCCTCATAAG+AGG | 0.467222 | 8_1:+17737087 | Msa1182620:CDS |
| AGGCCAACAAATGCAGAGCT+AGG | 0.470252 | 8_1:+17739965 | Msa1182620:CDS |
| TAGTGGAGCTTGTGGTGGTG+GGG | 0.472093 | 8_1:-17739727 | None:intergenic |
| CTACCTCCCGGCGCACCTAT+GGG | 0.475130 | 8_1:+17739777 | Msa1182620:CDS |
| ATTGCACCAGGTACAGATCT+AGG | 0.488177 | 8_1:-17739873 | None:intergenic |
| AATGCCACCACCACCTCCTA+TGG | 0.488452 | 8_1:+17739839 | Msa1182620:CDS |
| ATTGGAGGTGGAGGGGCCCG+TGG | 0.488633 | 8_1:-17739807 | None:intergenic |
| TCCTGACATTGGAGGTGGAG+GGG | 0.490414 | 8_1:-17739814 | None:intergenic |
| CTGTGAACATCTTTGAATCT+GGG | 0.493942 | 8_1:-17739447 | None:intergenic |
| GGATGCACCTTTATCCACTA+AGG | 0.495750 | 8_1:+17740029 | Msa1182620:three_prime_UTR |
| TCCCATCTATATCAAGGTAA+AGG | 0.503953 | 8_1:-17740186 | None:intergenic |
| GGTGGTAGTGGAGCTTGTGG+TGG | 0.508280 | 8_1:-17739732 | None:intergenic |
| GGAAGAGGCGGCATTGCACC+AGG | 0.509408 | 8_1:-17739885 | None:intergenic |
| GGTGGTGGTAGTGGAGCTTG+TGG | 0.511018 | 8_1:-17739735 | None:intergenic |
| ATAGGCCTTGGTGGAACACC+AGG | 0.514817 | 8_1:-17739702 | None:intergenic |
| AGGATTTCCCATAGGTGCGC+CGG | 0.516220 | 8_1:-17739784 | None:intergenic |
| CCTGGAAAACCTTGTGGAGG+TGG | 0.518508 | 8_1:-17739945 | None:intergenic |
| GATGGAGGTCTAGTCCCAAT+GGG | 0.518889 | 8_1:-17739918 | None:intergenic |
| GCAGCCATAGGAGGTGGTGG+TGG | 0.522582 | 8_1:-17739843 | None:intergenic |
| CGAGTCGTCGGAGTCGTTCA+CGG | 0.523440 | 8_1:-17736881 | None:intergenic |
| GGATTTCCCATAGGTGCGCC+GGG | 0.524617 | 8_1:-17739783 | None:intergenic |
| AGAGAATGGGGTTCAAAACC+AGG | 0.530659 | 8_1:+17736816 | Msa1182620:CDS |
| CCTAATGGCACCACAGCACC+TGG | 0.537047 | 8_1:+17739684 | Msa1182620:CDS |
| ATTTATGTCCTCCTATGAGC+AGG | 0.542578 | 8_1:+17739034 | Msa1182620:CDS |
| GATCCTGACATTGGAGGTGG+AGG | 0.544166 | 8_1:-17739816 | None:intergenic |
| TGATGGAGGTCTAGTCCCAA+TGG | 0.544944 | 8_1:-17739919 | None:intergenic |
| TTTGCAGCCATAGGAGGTGG+TGG | 0.550310 | 8_1:-17739846 | None:intergenic |
| GTGCCATTAGGTGCAGAGGC+AGG | 0.551727 | 8_1:-17739672 | None:intergenic |
| CCACCACCACCACCTCCACA+AGG | 0.552336 | 8_1:+17739753 | Msa1182620:CDS |
| TTTATTATTTATGTTGACCA+TGG | 0.557763 | 8_1:+17740145 | Msa1182620:three_prime_UTR |
| TGGTGGAACACCAGGTGCTG+TGG | 0.557787 | 8_1:-17739694 | None:intergenic |
| TATTGAGTGTTTAAAAGTTG+TGG | 0.558339 | 8_1:+17740004 | Msa1182620:three_prime_UTR |
| ACCTATGGGAAATCCTCCAC+GGG | 0.559129 | 8_1:+17739791 | Msa1182620:CDS |
| TTATGAGGCTGAGGTTGAGT+AGG | 0.562676 | 8_1:-17737083 | None:intergenic |
| CCATTAGGTGCAGAGGCAGG+TGG | 0.565316 | 8_1:-17739669 | None:intergenic |
| CCACCTCCTATGGCTGCAAA+CGG | 0.566286 | 8_1:+17739849 | Msa1182620:CDS |
| CCTCCACAAGGGCTACCTCC+CGG | 0.569045 | 8_1:+17739765 | Msa1182620:CDS |
| TTGTTTCGAGAGCGAGTCGT+CGG | 0.569489 | 8_1:-17736893 | None:intergenic |
| ATCGATGTCTCGGCTTTGCG+AGG | 0.569553 | 8_1:-17739013 | None:intergenic |
| GGAGGTGGAGGGGCCCGTGG+AGG | 0.570915 | 8_1:-17739804 | None:intergenic |
| GGCCAACAAATGCAGAGCTA+GGG | 0.571723 | 8_1:+17739966 | Msa1182620:CDS |
| CCGTTTGCAGCCATAGGAGG+TGG | 0.572311 | 8_1:-17739849 | None:intergenic |
| CACCTATGGGAAATCCTCCA+CGG | 0.572815 | 8_1:+17739790 | Msa1182620:CDS |
| GGCATTGATCCTGACATTGG+AGG | 0.577806 | 8_1:-17739822 | None:intergenic |
| GCTAAAACAAGTACATCCCT+AGG | 0.579138 | 8_1:+17740263 | Msa1182620:three_prime_UTR |
| GGACCGTTTGCAGCCATAGG+AGG | 0.584580 | 8_1:-17739852 | None:intergenic |
| TGGGGTTCAAAACCAGGAAG+TGG | 0.584935 | 8_1:+17736822 | Msa1182620:CDS |
| CTAGGACCGTTTGCAGCCAT+AGG | 0.585425 | 8_1:-17739855 | None:intergenic |
| AACTACCTCGCTCATACTCA+AGG | 0.586776 | 8_1:+17737005 | Msa1182620:CDS |
| GGTGGCATTGATCCTGACAT+TGG | 0.586792 | 8_1:-17739825 | None:intergenic |
| TGCTTAGTCACACGGTACCC+AGG | 0.587850 | 8_1:-17737254 | None:intergenic |
| GAGGACATAAATCGATGTCT+CGG | 0.588789 | 8_1:-17739023 | None:intergenic |
| ATCCTGACATTGGAGGTGGA+GGG | 0.597160 | 8_1:-17739815 | None:intergenic |
| TATTTCATGCGCAATCATCT+CGG | 0.597383 | 8_1:+17736936 | Msa1182620:CDS |
| GAGTGTTTAAAAGTTGTGGT+TGG | 0.598963 | 8_1:+17740008 | Msa1182620:three_prime_UTR |
| ACCTCAGCCTCATAAGAGGA+AGG | 0.605414 | 8_1:+17737091 | Msa1182620:CDS |
| TGTGGTGCCATTAGGTGCAG+AGG | 0.614977 | 8_1:-17739676 | None:intergenic |
| AAAGTGTACCTGCTCATAGG+AGG | 0.615464 | 8_1:-17739042 | None:intergenic |
| ATTGATCCTGACATTGGAGG+TGG | 0.623232 | 8_1:-17739819 | None:intergenic |
| TGCAATGAACAGGCAATTTG+GGG | 0.625850 | 8_1:-17740069 | None:intergenic |
| GCCCGTGGAGGATTTCCCAT+AGG | 0.626149 | 8_1:-17739792 | None:intergenic |
| TGTTGGCCTGGAAAACCTTG+TGG | 0.626757 | 8_1:-17739951 | None:intergenic |
| TGTGGAGGTGGCATTGATGG+AGG | 0.627797 | 8_1:-17739933 | None:intergenic |
| AACGGTCCTAGATCTGTACC+TGG | 0.633667 | 8_1:+17739867 | Msa1182620:CDS |
| CCGGGAGGTAGCCCTTGTGG+AGG | 0.636472 | 8_1:-17739765 | None:intergenic |
| ACAACAATGGACAGAGAATG+GGG | 0.640553 | 8_1:+17736804 | Msa1182620:exon |
| GAACTACACTTTGTAGACCA+TGG | 0.643434 | 8_1:-17740162 | None:intergenic |
| CCATCAATGCCACCTCCACA+AGG | 0.643855 | 8_1:+17739936 | Msa1182620:CDS |
| CACCACCACCACCTCCACAA+GGG | 0.645170 | 8_1:+17739754 | Msa1182620:CDS |
| GGTTCAAAACCAGGAAGTGG+CGG | 0.646802 | 8_1:+17736825 | Msa1182620:CDS |
| TGGCCTGGAAAACCTTGTGG+AGG | 0.647536 | 8_1:-17739948 | None:intergenic |
| TAAGCACTGAGCAACAACAA+TGG | 0.652548 | 8_1:+17736791 | Msa1182620:exon |
| TGGAGGTCTAGTCCCAATGG+GGG | 0.665514 | 8_1:-17739916 | None:intergenic |
| CTAACTCTTCACAACAACGA+AGG | 0.685400 | 8_1:+17736981 | Msa1182620:CDS |
| CAGCACCTGGTGTTCCACCA+AGG | 0.689929 | 8_1:+17739697 | Msa1182620:CDS |
| ATGGAGGTCTAGTCCCAATG+GGG | 0.691864 | 8_1:-17739917 | None:intergenic |
| GATCAAATTGCTTAGTCACA+CGG | 0.703542 | 8_1:-17737262 | None:intergenic |
| GTCGTCGGAGTCGTTCACGG+CGG | 0.760225 | 8_1:-17736878 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAGTTATTTAATTATAC+TGG | + | chr8_1:17737391-17737410 | Msa1182620:intron | 10.0% |
| !!! | TATATATTTCAAATTGATTT+TGG | + | chr8_1:17738019-17738038 | Msa1182620:intron | 10.0% |
| !!! | ATATATTTCAAATTGATTTT+GGG | + | chr8_1:17738020-17738039 | Msa1182620:intron | 10.0% |
| !!! | TTTATTATTTATCATGTTTT+GGG | + | chr8_1:17739299-17739318 | Msa1182620:intron | 10.0% |
| !! | AACAATTAAACAATGAATAA+GGG | - | chr8_1:17737144-17737163 | None:intergenic | 15.0% |
| !! | TAACAATTAAACAATGAATA+AGG | - | chr8_1:17737145-17737164 | None:intergenic | 15.0% |
| !! | TTCATTGTTTAATTGTTAAT+TGG | + | chr8_1:17737147-17737166 | Msa1182620:intron | 15.0% |
| !! | TCATTGTTTAATTGTTAATT+GGG | + | chr8_1:17737148-17737167 | Msa1182620:intron | 15.0% |
| !!! | GATAATTAGTTTGATTAATT+GGG | + | chr8_1:17737170-17737189 | Msa1182620:intron | 15.0% |
| !!! | TAATTTTATTATTTGTGTGT+TGG | + | chr8_1:17737198-17737217 | Msa1182620:intron | 15.0% |
| !!! | GTTTATTATTTATCATGTTT+TGG | + | chr8_1:17739298-17739317 | Msa1182620:intron | 15.0% |
| !! | ACAATTAAACAATGAATAAG+GGG | - | chr8_1:17737143-17737162 | None:intergenic | 20.0% |
| !!! | GGATAATTAGTTTGATTAAT+TGG | + | chr8_1:17737169-17737188 | Msa1182620:intron | 20.0% |
| !! | TGTTCGTTAAGTTATATTAT+AGG | + | chr8_1:17737350-17737369 | Msa1182620:intron | 20.0% |
| !!! | AAATAAAGTCAAACTGTTTT+TGG | + | chr8_1:17737522-17737541 | Msa1182620:intron | 20.0% |
| !!! | GTTGTTTTTATAAGTTATCT+TGG | + | chr8_1:17737562-17737581 | Msa1182620:intron | 20.0% |
| !! | GATATGTTCAAATAACTTAA+AGG | + | chr8_1:17737931-17737950 | Msa1182620:intron | 20.0% |
| !! | TATCTAAATGAGTTGTAATT+AGG | + | chr8_1:17738404-17738423 | Msa1182620:intron | 20.0% |
| !! | TTGAAAGAAATTGTTTCATA+AGG | - | chr8_1:17739261-17739280 | None:intergenic | 20.0% |
| !! | TTATGAAACAATTTCTTTCA+AGG | + | chr8_1:17739260-17739279 | Msa1182620:CDS | 20.0% |
| !! | TTGATTAACAAAGTACAAAA+AGG | - | chr8_1:17739362-17739381 | None:intergenic | 20.0% |
| !! | AAAAATTATGTAAACTAGGA+TGG | - | chr8_1:17739517-17739536 | None:intergenic | 20.0% |
| !! | ACACAAAAATTATGTAAACT+AGG | - | chr8_1:17739521-17739540 | None:intergenic | 20.0% |
| !! | TTTATTATTTATGTTGACCA+TGG | + | chr8_1:17740145-17740164 | Msa1182620:three_prime_UTR | 20.0% |
| ! | AAGGTTAATATGAAGAAATC+TGG | + | chr8_1:17737110-17737129 | Msa1182620:CDS | 25.0% |
| !! | TTTTATTATTTGTGTGTTGG+TGG | + | chr8_1:17737201-17737220 | Msa1182620:intron | 25.0% |
| !! | TTTATTATTTGTGTGTTGGT+GGG | + | chr8_1:17737202-17737221 | Msa1182620:intron | 25.0% |
| !!! | TTGTTTTTTGCAGTTAAGAT+TGG | + | chr8_1:17737227-17737246 | Msa1182620:intron | 25.0% |
| !!! | TGTTTTTTGCAGTTAAGATT+GGG | + | chr8_1:17737228-17737247 | Msa1182620:intron | 25.0% |
| !!! | TATAGGTGAAATTGTTTTTG+TGG | + | chr8_1:17737367-17737386 | Msa1182620:intron | 25.0% |
| ! | CTGGATTAATAATAAGTTCT+AGG | + | chr8_1:17737410-17737429 | Msa1182620:intron | 25.0% |
| !! | TTTTTATAAGTTATCTTGGC+AGG | + | chr8_1:17737566-17737585 | Msa1182620:intron | 25.0% |
| ! | AGTTATTTGAACATATCTAC+CGG | - | chr8_1:17737928-17737947 | None:intergenic | 25.0% |
| ! | TGTTCAAATAACTTAAAGGA+TGG | + | chr8_1:17737935-17737954 | Msa1182620:intron | 25.0% |
| !!! | TTGATTTTGGGAAAATTTAG+AGG | + | chr8_1:17738032-17738051 | Msa1182620:intron | 25.0% |
| ! | ACCAAAAAAAGAAGAAAGAA+TGG | + | chr8_1:17738169-17738188 | Msa1182620:intron | 25.0% |
| !!! | TCCATTCTTTCTTCTTTTTT+TGG | - | chr8_1:17738173-17738192 | None:intergenic | 25.0% |
| ! | AAGTCTTAGAGAGAAAATTA+GGG | + | chr8_1:17738192-17738211 | Msa1182620:intron | 25.0% |
| !!! | TAAAAAGTAGTTGGTTTGTT+TGG | + | chr8_1:17738251-17738270 | Msa1182620:intron | 25.0% |
| !!! | AAAAAGTAGTTGGTTTGTTT+GGG | + | chr8_1:17738252-17738271 | Msa1182620:intron | 25.0% |
| !! | TGAAGGATAACACAAATTTT+AGG | + | chr8_1:17738330-17738349 | Msa1182620:intron | 25.0% |
| !! | GAAGGATAACACAAATTTTA+GGG | + | chr8_1:17738331-17738350 | Msa1182620:intron | 25.0% |
| !!! | TTTAAGTTGCACTATTAAGA+AGG | + | chr8_1:17738376-17738395 | Msa1182620:intron | 25.0% |
| !!! | AGGTACAATTTACTTTTGAT+AGG | + | chr8_1:17738424-17738443 | Msa1182620:intron | 25.0% |
| !!! | ACATATTGGTTGGTTTATTT+GGG | + | chr8_1:17738620-17738639 | Msa1182620:intron | 25.0% |
| ! | TGATAGATAGTTCAAGTATT+AGG | + | chr8_1:17738701-17738720 | Msa1182620:intron | 25.0% |
| ! | GATAGATAGTTCAAGTATTA+GGG | + | chr8_1:17738702-17738721 | Msa1182620:intron | 25.0% |
| ! | ATAGATAGTTCAAGTATTAG+GGG | + | chr8_1:17738703-17738722 | Msa1182620:intron | 25.0% |
| ! | TAGAATCAAACGATTCTTAA+TGG | - | chr8_1:17738766-17738785 | None:intergenic | 25.0% |
| ! | ACACAAATACAATTCATGAT+AGG | + | chr8_1:17738802-17738821 | Msa1182620:intron | 25.0% |
| !! | TCACATTTTTATGTATACAG+AGG | + | chr8_1:17739187-17739206 | Msa1182620:intron | 25.0% |
| !! | TACTGGTATCTTTTATCAAA+TGG | - | chr8_1:17739219-17739238 | None:intergenic | 25.0% |
| ! | TACATACATATATTGAGTTC+CGG | + | chr8_1:17739329-17739348 | Msa1182620:intron | 25.0% |
| ! | AGTACAAAAAGGTAAATTTC+CGG | - | chr8_1:17739351-17739370 | None:intergenic | 25.0% |
| !! | TTTTATCTCAGAAAAGAAAG+AGG | - | chr8_1:17739486-17739505 | None:intergenic | 25.0% |
| ! | TGTGATTGTGAATAAGTTAA+CGG | + | chr8_1:17739538-17739557 | Msa1182620:intron | 25.0% |
| ! | TATTGAGTGTTTAAAAGTTG+TGG | + | chr8_1:17740004-17740023 | Msa1182620:three_prime_UTR | 25.0% |
| ! | AAAAATTCCCATCTATATCA+AGG | - | chr8_1:17740195-17740214 | None:intergenic | 25.0% |
| !! | TATCTCTTTGAAACTGGAAT+TGG | - | chr8_1:17736737-17736756 | None:intergenic | 30.0% |
| ATATTAACCTTCCTCTTATG+AGG | - | chr8_1:17737101-17737120 | None:intergenic | 30.0% | |
| !! | AATAAGTTCTAGGTCATGTT+TGG | + | chr8_1:17737420-17737439 | Msa1182620:intron | 30.0% |
| !!! | AGTCAAACTGTTTTTGGATA+AGG | + | chr8_1:17737528-17737547 | Msa1182620:intron | 30.0% |
| ! | AATAAGTTGAACACAGCTAA+TGG | + | chr8_1:17737597-17737616 | Msa1182620:intron | 30.0% |
| !! | TGCTAGCTCTTAGATTTTAA+TGG | + | chr8_1:17737995-17738014 | Msa1182620:intron | 30.0% |
| TTGGGAAAATTTAGAGGATT+AGG | + | chr8_1:17738038-17738057 | Msa1182620:intron | 30.0% | |
| TGTATATGAGAAGATACATG+AGG | + | chr8_1:17738070-17738089 | Msa1182620:intron | 30.0% | |
| AGATACATGAGGATTAAGAA+TGG | + | chr8_1:17738081-17738100 | Msa1182620:intron | 30.0% | |
| GAAGTCTTAGAGAGAAAATT+AGG | + | chr8_1:17738191-17738210 | Msa1182620:intron | 30.0% | |
| TATTAGTGGAGAATATGATG+TGG | + | chr8_1:17738222-17738241 | Msa1182620:intron | 30.0% | |
| TGGTAGAGTTAAAAAGTAGT+TGG | + | chr8_1:17738242-17738261 | Msa1182620:intron | 30.0% | |
| ATAAATGACAGTGAAGATAG+TGG | + | chr8_1:17738301-17738320 | Msa1182620:intron | 30.0% | |
| !! | GATAGAGAGAGTATTATGAT+AGG | + | chr8_1:17738540-17738559 | Msa1182620:intron | 30.0% |
| AAACCGTAGAGAGAAAATTA+GGG | + | chr8_1:17738567-17738586 | Msa1182620:intron | 30.0% | |
| !! | CACATATTGGTTGGTTTATT+TGG | + | chr8_1:17738619-17738638 | Msa1182620:intron | 30.0% |
| AAGAATCGTTTGATTCTAAG+TGG | + | chr8_1:17738768-17738787 | Msa1182620:intron | 30.0% | |
| CAATTCATGATAGGACATTA+TGG | + | chr8_1:17738811-17738830 | Msa1182620:intron | 30.0% | |
| TCAATGTTGAGAAAATCACA+AGG | - | chr8_1:17738925-17738944 | None:intergenic | 30.0% | |
| AAAGCCATGTCTTAACATTT+CGG | + | chr8_1:17739152-17739171 | Msa1182620:intron | 30.0% | |
| AAAACCGAAATGTTAAGACA+TGG | - | chr8_1:17739159-17739178 | None:intergenic | 30.0% | |
| AAAAATGAGATGCAATGAAC+AGG | - | chr8_1:17740082-17740101 | None:intergenic | 30.0% | |
| TCCTTTACCTTGATATAGAT+GGG | + | chr8_1:17740185-17740204 | Msa1182620:three_prime_UTR | 30.0% | |
| !!! | TAGATGGGAATTTTTTTGCT+TGG | + | chr8_1:17740200-17740219 | Msa1182620:three_prime_UTR | 30.0% |
| !! | TGCTACTATCTCTTTGAAAC+TGG | - | chr8_1:17736743-17736762 | None:intergenic | 35.0% |
| AACAACAATGGACAGAGAAT+GGG | + | chr8_1:17736803-17736822 | Msa1182620:exon | 35.0% | |
| AGATGATTGCGCATGAAATA+GGG | - | chr8_1:17736936-17736955 | None:intergenic | 35.0% | |
| TATTTCATGCGCAATCATCT+CGG | + | chr8_1:17736936-17736955 | Msa1182620:CDS | 35.0% | |
| ! | TTTTTGCAGTTAAGATTGGG+AGG | + | chr8_1:17737231-17737250 | Msa1182620:intron | 35.0% |
| GATCAAATTGCTTAGTCACA+CGG | - | chr8_1:17737265-17737284 | None:intergenic | 35.0% | |
| AACGAGAACAAACCTGAAAA+AGG | - | chr8_1:17737310-17737329 | None:intergenic | 35.0% | |
| AAGTTATCTTGGCAGGTTTA+TGG | + | chr8_1:17737573-17737592 | Msa1182620:intron | 35.0% | |
| !!! | GTTGCTTTTATAAGTTGTGC+TGG | + | chr8_1:17737812-17737831 | Msa1182620:intron | 35.0% |
| ! | CTTTTATAAGTTGTGCTGGA+GGG | + | chr8_1:17737816-17737835 | Msa1182620:intron | 35.0% |
| AAAAACATGTGACACTGGTA+GGG | - | chr8_1:17737902-17737921 | None:intergenic | 35.0% | |
| TAAAAACATGTGACACTGGT+AGG | - | chr8_1:17737903-17737922 | None:intergenic | 35.0% | |
| !! | AGTGTCACATGTTTTTATGC+CGG | + | chr8_1:17737906-17737925 | Msa1182620:intron | 35.0% |
| ! | ATTTAGAGGATTAGGAGTAC+TGG | + | chr8_1:17738046-17738065 | Msa1182620:intron | 35.0% |
| !!! | TTTTTTTGGTGTTAACCCTC+TGG | - | chr8_1:17738159-17738178 | None:intergenic | 35.0% |
| !! | GAAGATAGTGGATCAAATGA+AGG | + | chr8_1:17738313-17738332 | Msa1182620:intron | 35.0% |
| !! | AACACAAATTTTAGGGACAG+AGG | + | chr8_1:17738338-17738357 | Msa1182620:intron | 35.0% |
| !! | ACACAAATTTTAGGGACAGA+GGG | + | chr8_1:17738339-17738358 | Msa1182620:intron | 35.0% |
| GAAACCGTAGAGAGAAAATT+AGG | + | chr8_1:17738566-17738585 | Msa1182620:intron | 35.0% | |
| ! | CTACCCTAATTTTCTCTCTA+CGG | - | chr8_1:17738573-17738592 | None:intergenic | 35.0% |
| TAGCACGGTTCTATAAAAGA+TGG | + | chr8_1:17738590-17738609 | Msa1182620:intron | 35.0% | |
| GACTTGTAGAAATACTAGTG+AGG | + | chr8_1:17738665-17738684 | Msa1182620:intron | 35.0% | |
| TTCATGATAGGACATTATGG+TGG | + | chr8_1:17738814-17738833 | Msa1182620:intron | 35.0% | |
| ! | CAGTCTATTCTCACATTTTC+GGG | - | chr8_1:17738858-17738877 | None:intergenic | 35.0% |
| ! | GCAGTCTATTCTCACATTTT+CGG | - | chr8_1:17738859-17738878 | None:intergenic | 35.0% |
| ! | TTAAAAGTGTACCTGCTCAT+AGG | - | chr8_1:17739048-17739067 | None:intergenic | 35.0% |
| ACACACACACACAAAAAGAT+AGG | - | chr8_1:17739091-17739110 | None:intergenic | 35.0% | |
| TGTTAATCAATCCACATCTC+AGG | + | chr8_1:17739372-17739391 | Msa1182620:intron | 35.0% | |
| GACTTATCAATTTCTGTGCT+TGG | - | chr8_1:17739400-17739419 | None:intergenic | 35.0% | |
| ! | TCCAAAGTTTTTCTCGCATT+GGG | + | chr8_1:17739423-17739442 | Msa1182620:CDS | 35.0% |
| CTGTGAACATCTTTGAATCT+GGG | - | chr8_1:17739450-17739469 | None:intergenic | 35.0% | |
| ACTGTGAACATCTTTGAATC+TGG | - | chr8_1:17739451-17739470 | None:intergenic | 35.0% | |
| GAGTGTTTAAAAGTTGTGGT+TGG | + | chr8_1:17740008-17740027 | Msa1182620:three_prime_UTR | 35.0% | |
| !! | TTTTGAGCCTTAGTGGATAA+AGG | - | chr8_1:17740039-17740058 | None:intergenic | 35.0% |
| !!! | TGTTTTGTTTTGAGCCTTAG+TGG | - | chr8_1:17740046-17740065 | None:intergenic | 35.0% |
| ATGCAATGAACAGGCAATTT+GGG | - | chr8_1:17740073-17740092 | None:intergenic | 35.0% | |
| ! | CATTGATGTATCAAGTTGTC+TGG | + | chr8_1:17740120-17740139 | Msa1182620:three_prime_UTR | 35.0% |
| CTCCTTTACCTTGATATAGA+TGG | + | chr8_1:17740184-17740203 | Msa1182620:three_prime_UTR | 35.0% | |
| TCCCATCTATATCAAGGTAA+AGG | - | chr8_1:17740189-17740208 | None:intergenic | 35.0% | |
| TCCTGTAATCAAACAGTTAC+TGG | - | chr8_1:17740226-17740245 | None:intergenic | 35.0% | |
| !! | TAAGCACTGAGCAACAACAA+TGG | + | chr8_1:17736791-17736810 | Msa1182620:exon | 40.0% |
| CAACAACAATGGACAGAGAA+TGG | + | chr8_1:17736802-17736821 | Msa1182620:exon | 40.0% | |
| ACAACAATGGACAGAGAATG+GGG | + | chr8_1:17736804-17736823 | Msa1182620:exon | 40.0% | |
| !! | TATAGCTTCGTTTTGAGCTG+TGG | - | chr8_1:17736856-17736875 | None:intergenic | 40.0% |
| GAGATGATTGCGCATGAAAT+AGG | - | chr8_1:17736937-17736956 | None:intergenic | 40.0% | |
| CTAACTCTTCACAACAACGA+AGG | + | chr8_1:17736981-17737000 | Msa1182620:CDS | 40.0% | |
| AGAGATCTTTGCTTCGTATC+AGG | - | chr8_1:17737287-17737306 | None:intergenic | 40.0% | |
| ! | GCAAAGATCTCTCCTTTTTC+AGG | + | chr8_1:17737295-17737314 | Msa1182620:CDS | 40.0% |
| ! | GCTTTTATAAGTTGTGCTGG+AGG | + | chr8_1:17737815-17737834 | Msa1182620:intron | 40.0% |
| GGCATAAAAACATGTGACAC+TGG | - | chr8_1:17737907-17737926 | None:intergenic | 40.0% | |
| TTAAGAATGGAAGTCTCTCC+CGG | + | chr8_1:17738094-17738113 | Msa1182620:intron | 40.0% | |
| ACAACCACTATCACTACTAC+CGG | - | chr8_1:17738486-17738505 | None:intergenic | 40.0% | |
| TCGATTACACTTCTCCATGT+GGG | + | chr8_1:17738511-17738530 | Msa1182620:intron | 40.0% | |
| TCTCTATCCTAATACCCACA+TGG | - | chr8_1:17738528-17738547 | None:intergenic | 40.0% | |
| GAGAGAAAATTAGGGTAGCA+CGG | + | chr8_1:17738575-17738594 | Msa1182620:intron | 40.0% | |
| CACGGTTCTATAAAAGATGG+CGG | + | chr8_1:17738593-17738612 | Msa1182620:intron | 40.0% | |
| GGTTTATTTGGGTATGTGTG+TGG | + | chr8_1:17738631-17738650 | Msa1182620:intron | 40.0% | |
| AAGTATTAGGGGTTGACATG+AGG | + | chr8_1:17738714-17738733 | Msa1182620:intron | 40.0% | |
| AGTATTAGGGGTTGACATGA+GGG | + | chr8_1:17738715-17738734 | Msa1182620:intron | 40.0% | |
| !!! | TCTCACATTTTCGGGTACAT+GGG | - | chr8_1:17738850-17738869 | None:intergenic | 40.0% |
| !!! | TTCTCACATTTTCGGGTACA+TGG | - | chr8_1:17738851-17738870 | None:intergenic | 40.0% |
| GAGGACATAAATCGATGTCT+CGG | - | chr8_1:17739026-17739045 | None:intergenic | 40.0% | |
| ATTTATGTCCTCCTATGAGC+AGG | + | chr8_1:17739034-17739053 | Msa1182620:CDS | 40.0% | |
| ACACACAAAAAGATAGGAGG+CGG | - | chr8_1:17739085-17739104 | None:intergenic | 40.0% | |
| CACACACACAAAAAGATAGG+AGG | - | chr8_1:17739088-17739107 | None:intergenic | 40.0% | |
| CAGCTGCAAACAATAGATAC+TGG | - | chr8_1:17739236-17739255 | None:intergenic | 40.0% | |
| ! | ATGCGAGAAAAACTTTGGAG+TGG | - | chr8_1:17739422-17739441 | None:intergenic | 40.0% |
| ! | CTCCAAAGTTTTTCTCGCAT+TGG | + | chr8_1:17739422-17739441 | Msa1182620:CDS | 40.0% |
| TCCCAATGCGAGAAAAACTT+TGG | - | chr8_1:17739427-17739446 | None:intergenic | 40.0% | |
| TGCAATGAACAGGCAATTTG+GGG | - | chr8_1:17740072-17740091 | None:intergenic | 40.0% | |
| GATGCAATGAACAGGCAATT+TGG | - | chr8_1:17740074-17740093 | None:intergenic | 40.0% | |
| GAACTACACTTTGTAGACCA+TGG | - | chr8_1:17740165-17740184 | None:intergenic | 40.0% | |
| GCCAGTAACTGTTTGATTAC+AGG | + | chr8_1:17740222-17740241 | Msa1182620:three_prime_UTR | 40.0% | |
| AGAGAATGGGGTTCAAAACC+AGG | + | chr8_1:17736816-17736835 | Msa1182620:CDS | 45.0% | |
| AACTACCTCGCTCATACTCA+AGG | + | chr8_1:17737005-17737024 | Msa1182620:CDS | 45.0% | |
| ! | GTTTTCCTTGAGTATGAGCG+AGG | - | chr8_1:17737013-17737032 | None:intergenic | 45.0% |
| !! | AGGTTGAGTAGGAGCATCTT+TGG | - | chr8_1:17737075-17737094 | None:intergenic | 45.0% |
| TTATGAGGCTGAGGTTGAGT+AGG | - | chr8_1:17737086-17737105 | None:intergenic | 45.0% | |
| !! | GAGTGAGACTTAGCTCTGTT+TGG | + | chr8_1:17737685-17737704 | Msa1182620:intron | 45.0% |
| AAGTTGTGCTGGAGGGTTTA+TGG | + | chr8_1:17737823-17737842 | Msa1182620:intron | 45.0% | |
| AAGTAATCCAGAGTATGGCC+GGG | - | chr8_1:17738115-17738134 | None:intergenic | 45.0% | |
| CAAGTAATCCAGAGTATGGC+CGG | - | chr8_1:17738116-17738135 | None:intergenic | 45.0% | |
| GGCCATACTCTGGATTACTT+GGG | + | chr8_1:17738115-17738134 | Msa1182620:intron | 45.0% | |
| GACCCAAGTAATCCAGAGTA+TGG | - | chr8_1:17738120-17738139 | None:intergenic | 45.0% | |
| ! | TGTTAACCCTCTGGTTCCTA+GGG | - | chr8_1:17738150-17738169 | None:intergenic | 45.0% |
| ATTAGGGCAGCGCTTATTAG+TGG | + | chr8_1:17738208-17738227 | Msa1182620:intron | 45.0% | |
| !! | TTGGTTTGTTTGGGTGTGTG+TGG | + | chr8_1:17738261-17738280 | Msa1182620:intron | 45.0% |
| !! | TGGTTTGTTTGGGTGTGTGT+GGG | + | chr8_1:17738262-17738281 | Msa1182620:intron | 45.0% |
| AACTCCATGAGAGAAGACTC+CGG | + | chr8_1:17738464-17738483 | Msa1182620:intron | 45.0% | |
| GTCGATTACACTTCTCCATG+TGG | + | chr8_1:17738510-17738529 | Msa1182620:intron | 45.0% | |
| CACTTCTCCATGTGGGTATT+AGG | + | chr8_1:17738518-17738537 | Msa1182620:intron | 45.0% | |
| !! | AAGATGGCGGAGTCACATAT+TGG | + | chr8_1:17738606-17738625 | Msa1182620:intron | 45.0% |
| GGGACATCAAAGAAGACTGT+AGG | + | chr8_1:17738735-17738754 | Msa1182620:intron | 45.0% | |
| AAAGTGTACCTGCTCATAGG+AGG | - | chr8_1:17739045-17739064 | None:intergenic | 45.0% | |
| !!! | TTTTAAAACCAAGCCCCCAG+AGG | + | chr8_1:17739632-17739651 | Msa1182620:CDS | 45.0% |
| ATTGATCCTGACATTGGAGG+TGG | - | chr8_1:17739822-17739841 | None:intergenic | 45.0% | |
| ATTGCACCAGGTACAGATCT+AGG | - | chr8_1:17739876-17739895 | None:intergenic | 45.0% | |
| GGATGCACCTTTATCCACTA+AGG | + | chr8_1:17740029-17740048 | Msa1182620:three_prime_UTR | 45.0% | |
| TGGGGTTCAAAACCAGGAAG+TGG | + | chr8_1:17736822-17736841 | Msa1182620:CDS | 50.0% | |
| GGTTCAAAACCAGGAAGTGG+CGG | + | chr8_1:17736825-17736844 | Msa1182620:CDS | 50.0% | |
| !! | AGCTTCGTTTTGAGCTGTGG+CGG | - | chr8_1:17736853-17736872 | None:intergenic | 50.0% |
| TTGTTTCGAGAGCGAGTCGT+CGG | - | chr8_1:17736896-17736915 | None:intergenic | 50.0% | |
| AGCAGCACGTTTAGCGAGAT+TGG | - | chr8_1:17737045-17737064 | None:intergenic | 50.0% | |
| CTCAACCTCAGCCTCATAAG+AGG | + | chr8_1:17737087-17737106 | Msa1182620:CDS | 50.0% | |
| ACCTCAGCCTCATAAGAGGA+AGG | + | chr8_1:17737091-17737110 | Msa1182620:CDS | 50.0% | |
| ACCTTCCTCTTATGAGGCTG+AGG | - | chr8_1:17737095-17737114 | None:intergenic | 50.0% | |
| CAGTTAAGATTGGGAGGCCT+GGG | + | chr8_1:17737237-17737256 | Msa1182620:intron | 50.0% | |
| CGGCCATACTCTGGATTACT+TGG | + | chr8_1:17738114-17738133 | Msa1182620:intron | 50.0% | |
| ! | GTTAACCCTCTGGTTCCTAG+GGG | - | chr8_1:17738149-17738168 | None:intergenic | 50.0% |
| ! | GTGTTAACCCTCTGGTTCCT+AGG | - | chr8_1:17738151-17738170 | None:intergenic | 50.0% |
| ACTACCGGAGTCTTCTCTCA+TGG | - | chr8_1:17738471-17738490 | None:intergenic | 50.0% | |
| GACTCCGGTAGTAGTGATAG+TGG | + | chr8_1:17738479-17738498 | Msa1182620:intron | 50.0% | |
| TGGCGGAGTCACATATTGGT+TGG | + | chr8_1:17738610-17738629 | Msa1182620:intron | 50.0% | |
| TTGGGTATGTGTGTGGAGAC+TGG | + | chr8_1:17738638-17738657 | Msa1182620:intron | 50.0% | |
| AGAATAGACTGCGCTGTTGC+TGG | + | chr8_1:17738867-17738886 | Msa1182620:intron | 50.0% | |
| TTTGCGAGGTCTTCGATCTC+AGG | - | chr8_1:17739002-17739021 | None:intergenic | 50.0% | |
| TGTGCTTGGTACCTGAGATG+TGG | - | chr8_1:17739386-17739405 | None:intergenic | 50.0% | |
| CACCTATGGGAAATCCTCCA+CGG | + | chr8_1:17739790-17739809 | Msa1182620:CDS | 50.0% | |
| ACCTATGGGAAATCCTCCAC+GGG | + | chr8_1:17739791-17739810 | Msa1182620:CDS | 50.0% | |
| ATCCTGACATTGGAGGTGGA+GGG | - | chr8_1:17739818-17739837 | None:intergenic | 50.0% | |
| !! | GGCATTGATCCTGACATTGG+AGG | - | chr8_1:17739825-17739844 | None:intergenic | 50.0% |
| !! | GGTGGCATTGATCCTGACAT+TGG | - | chr8_1:17739828-17739847 | None:intergenic | 50.0% |
| AACGGTCCTAGATCTGTACC+TGG | + | chr8_1:17739867-17739886 | Msa1182620:CDS | 50.0% | |
| ATGGAGGTCTAGTCCCAATG+GGG | - | chr8_1:17739920-17739939 | None:intergenic | 50.0% | |
| GATGGAGGTCTAGTCCCAAT+GGG | - | chr8_1:17739921-17739940 | None:intergenic | 50.0% | |
| TGATGGAGGTCTAGTCCCAA+TGG | - | chr8_1:17739922-17739941 | None:intergenic | 50.0% | |
| ! | TGTTGGCCTGGAAAACCTTG+TGG | - | chr8_1:17739954-17739973 | None:intergenic | 50.0% |
| ! | TAGCTCTGCATTTGTTGGCC+TGG | - | chr8_1:17739966-17739985 | None:intergenic | 50.0% |
| AGGCCAACAAATGCAGAGCT+AGG | + | chr8_1:17739965-17739984 | Msa1182620:CDS | 50.0% | |
| GGCCAACAAATGCAGAGCTA+GGG | + | chr8_1:17739966-17739985 | Msa1182620:CDS | 50.0% | |
| !! | TGCCCTAGCTCTGCATTTGT+TGG | - | chr8_1:17739971-17739990 | None:intergenic | 50.0% |
| GCAGTTAAGATTGGGAGGCC+TGG | + | chr8_1:17737236-17737255 | Msa1182620:intron | 55.0% | |
| TGCTTAGTCACACGGTACCC+AGG | - | chr8_1:17737257-17737276 | None:intergenic | 55.0% | |
| ! | TTTGGGTGTGTGTGGGCTGT+GGG | + | chr8_1:17738269-17738288 | Msa1182620:intron | 55.0% |
| ATCGATGTCTCGGCTTTGCG+AGG | - | chr8_1:17739016-17739035 | None:intergenic | 55.0% | |
| !! | TGTGGTTTGGTTGCCTCTGG+GGG | - | chr8_1:17739648-17739667 | None:intergenic | 55.0% |
| !! | CTGTGGTTTGGTTGCCTCTG+GGG | - | chr8_1:17739649-17739668 | None:intergenic | 55.0% |
| !! | GCTGTGGTTTGGTTGCCTCT+GGG | - | chr8_1:17739650-17739669 | None:intergenic | 55.0% |
| !! | TGTGGTGCCATTAGGTGCAG+AGG | - | chr8_1:17739679-17739698 | None:intergenic | 55.0% |
| ATAGGCCTTGGTGGAACACC+AGG | - | chr8_1:17739705-17739724 | None:intergenic | 55.0% | |
| ! | TAGTGGAGCTTGTGGTGGTG+GGG | - | chr8_1:17739730-17739749 | None:intergenic | 55.0% |
| ! | GTAGTGGAGCTTGTGGTGGT+GGG | - | chr8_1:17739731-17739750 | None:intergenic | 55.0% |
| AGGATTTCCCATAGGTGCGC+CGG | - | chr8_1:17739787-17739806 | None:intergenic | 55.0% | |
| TCCTGACATTGGAGGTGGAG+GGG | - | chr8_1:17739817-17739836 | None:intergenic | 55.0% | |
| GATCCTGACATTGGAGGTGG+AGG | - | chr8_1:17739819-17739838 | None:intergenic | 55.0% | |
| AATGCCACCACCACCTCCTA+TGG | + | chr8_1:17739839-17739858 | Msa1182620:CDS | 55.0% | |
| TTTGCAGCCATAGGAGGTGG+TGG | - | chr8_1:17739849-17739868 | None:intergenic | 55.0% | |
| CCACCTCCTATGGCTGCAAA+CGG | + | chr8_1:17739849-17739868 | Msa1182620:CDS | 55.0% | |
| CTAGGACCGTTTGCAGCCAT+AGG | - | chr8_1:17739858-17739877 | None:intergenic | 55.0% | |
| TGGAGGTCTAGTCCCAATGG+GGG | - | chr8_1:17739919-17739938 | None:intergenic | 55.0% | |
| !! | TGTGGAGGTGGCATTGATGG+AGG | - | chr8_1:17739936-17739955 | None:intergenic | 55.0% |
| ! | CCTTGTGGAGGTGGCATTGA+TGG | - | chr8_1:17739939-17739958 | None:intergenic | 55.0% |
| CCATCAATGCCACCTCCACA+AGG | + | chr8_1:17739936-17739955 | Msa1182620:CDS | 55.0% | |
| CCTGGAAAACCTTGTGGAGG+TGG | - | chr8_1:17739948-17739967 | None:intergenic | 55.0% | |
| ! | CCACCTCCACAAGGTTTTCC+AGG | + | chr8_1:17739945-17739964 | Msa1182620:CDS | 55.0% |
| TGGCCTGGAAAACCTTGTGG+AGG | - | chr8_1:17739951-17739970 | None:intergenic | 55.0% | |
| CGAGTCGTCGGAGTCGTTCA+CGG | - | chr8_1:17736884-17736903 | None:intergenic | 60.0% | |
| AGTCTCTCCCGGCCATACTC+TGG | + | chr8_1:17738105-17738124 | Msa1182620:intron | 60.0% | |
| ! | CTCTGGTTCCTAGGGGAAGG+GGG | - | chr8_1:17738142-17738161 | None:intergenic | 60.0% |
| ! | CCTCTGGTTCCTAGGGGAAG+GGG | - | chr8_1:17738143-17738162 | None:intergenic | 60.0% |
| ! | CCCTCTGGTTCCTAGGGGAA+GGG | - | chr8_1:17738144-17738163 | None:intergenic | 60.0% |
| CCCTTCCCCTAGGAACCAGA+GGG | + | chr8_1:17738141-17738160 | Msa1182620:intron | 60.0% | |
| ! | ACCCTCTGGTTCCTAGGGGA+AGG | - | chr8_1:17738145-17738164 | None:intergenic | 60.0% |
| ! | GTTTGGGTGTGTGTGGGCTG+TGG | + | chr8_1:17738268-17738287 | Msa1182620:intron | 60.0% |
| ! | TTTGGTTGCCTCTGGGGGCT+TGG | - | chr8_1:17739643-17739662 | None:intergenic | 60.0% |
| !! | GGCTGTGGTTTGGTTGCCTC+TGG | - | chr8_1:17739651-17739670 | None:intergenic | 60.0% |
| AGAGGCAGGTGGCTGTGGTT+TGG | - | chr8_1:17739661-17739680 | None:intergenic | 60.0% | |
| CCATTAGGTGCAGAGGCAGG+TGG | - | chr8_1:17739672-17739691 | None:intergenic | 60.0% | |
| CCACCTGCCTCTGCACCTAA+TGG | + | chr8_1:17739669-17739688 | Msa1182620:CDS | 60.0% | |
| ! | GTGCCATTAGGTGCAGAGGC+AGG | - | chr8_1:17739675-17739694 | None:intergenic | 60.0% |
| !! | CCAGGTGCTGTGGTGCCATT+AGG | - | chr8_1:17739687-17739706 | None:intergenic | 60.0% |
| CCTAATGGCACCACAGCACC+TGG | + | chr8_1:17739684-17739703 | Msa1182620:CDS | 60.0% | |
| ! | TGGTGGAACACCAGGTGCTG+TGG | - | chr8_1:17739697-17739716 | None:intergenic | 60.0% |
| CAGCACCTGGTGTTCCACCA+AGG | + | chr8_1:17739697-17739716 | Msa1182620:CDS | 60.0% | |
| !! | AGTGGAGCTTGTGGTGGTGG+GGG | - | chr8_1:17739729-17739748 | None:intergenic | 60.0% |
| !! | GGTAGTGGAGCTTGTGGTGG+TGG | - | chr8_1:17739732-17739751 | None:intergenic | 60.0% |
| !! | GGTGGTAGTGGAGCTTGTGG+TGG | - | chr8_1:17739735-17739754 | None:intergenic | 60.0% |
| !! | GGTGGTGGTAGTGGAGCTTG+TGG | - | chr8_1:17739738-17739757 | None:intergenic | 60.0% |
| CACCACCACCACCTCCACAA+GGG | + | chr8_1:17739754-17739773 | Msa1182620:CDS | 60.0% | |
| GGATTTCCCATAGGTGCGCC+GGG | - | chr8_1:17739786-17739805 | None:intergenic | 60.0% | |
| GCCCGTGGAGGATTTCCCAT+AGG | - | chr8_1:17739795-17739814 | None:intergenic | 60.0% | |
| CCGTTTGCAGCCATAGGAGG+TGG | - | chr8_1:17739852-17739871 | None:intergenic | 60.0% | |
| GGACCGTTTGCAGCCATAGG+AGG | - | chr8_1:17739855-17739874 | None:intergenic | 60.0% | |
| GTCGTCGGAGTCGTTCACGG+CGG | - | chr8_1:17736881-17736900 | None:intergenic | 65.0% | |
| ACTTGGGTCCCCCTTCCCCT+AGG | + | chr8_1:17738131-17738150 | Msa1182620:intron | 65.0% | |
| CCCCTTCCCCTAGGAACCAG+AGG | + | chr8_1:17738140-17738159 | Msa1182620:intron | 65.0% | |
| !! | GCTTGTGGTGGTGGGGGCAT+AGG | - | chr8_1:17739723-17739742 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTAG+TGG | - | chr8_1:17739747-17739766 | None:intergenic | 65.0% |
| !! | TGTGGAGGTGGTGGTGGTGG+TGG | - | chr8_1:17739753-17739772 | None:intergenic | 65.0% |
| !! | CCTTGTGGAGGTGGTGGTGG+TGG | - | chr8_1:17739756-17739775 | None:intergenic | 65.0% |
| CCACCACCACCACCTCCACA+AGG | + | chr8_1:17739753-17739772 | Msa1182620:CDS | 65.0% | |
| ! | AGCCCTTGTGGAGGTGGTGG+TGG | - | chr8_1:17739759-17739778 | None:intergenic | 65.0% |
| GGTAGCCCTTGTGGAGGTGG+TGG | - | chr8_1:17739762-17739781 | None:intergenic | 65.0% | |
| GGAGGTAGCCCTTGTGGAGG+TGG | - | chr8_1:17739765-17739784 | None:intergenic | 65.0% | |
| CCTCCACAAGGGCTACCTCC+CGG | + | chr8_1:17739765-17739784 | Msa1182620:CDS | 65.0% | |
| CTACCTCCCGGCGCACCTAT+GGG | + | chr8_1:17739777-17739796 | Msa1182620:CDS | 65.0% | |
| TTTCCCATAGGTGCGCCGGG+AGG | - | chr8_1:17739783-17739802 | None:intergenic | 65.0% | |
| GCCCCTCCACCTCCAATGTC+AGG | + | chr8_1:17739813-17739832 | Msa1182620:CDS | 65.0% | |
| ! | GCAGCCATAGGAGGTGGTGG+TGG | - | chr8_1:17739846-17739865 | None:intergenic | 65.0% |
| GGAAGAGGCGGCATTGCACC+AGG | - | chr8_1:17739888-17739907 | None:intergenic | 65.0% | |
| TTCCACCGCCAGCCCCCATT+GGG | + | chr8_1:17739904-17739923 | Msa1182620:CDS | 65.0% | |
| CTAGTCCCAATGGGGGCTGG+CGG | - | chr8_1:17739912-17739931 | None:intergenic | 65.0% | |
| GGTCTAGTCCCAATGGGGGC+TGG | - | chr8_1:17739915-17739934 | None:intergenic | 65.0% | |
| GGTGCAGAGGCAGGTGGCTG+TGG | - | chr8_1:17739666-17739685 | None:intergenic | 70.0% | |
| ! | GGTGGGGGCATAGGCCTTGG+TGG | - | chr8_1:17739714-17739733 | None:intergenic | 70.0% |
| !! | GGTGGTGGGGGCATAGGCCT+TGG | - | chr8_1:17739717-17739736 | None:intergenic | 70.0% |
| CCGGGAGGTAGCCCTTGTGG+AGG | - | chr8_1:17739768-17739787 | None:intergenic | 70.0% | |
| GCTACCTCCCGGCGCACCTA+TGG | + | chr8_1:17739776-17739795 | Msa1182620:CDS | 70.0% | |
| ATTGGAGGTGGAGGGGCCCG+TGG | - | chr8_1:17739810-17739829 | None:intergenic | 70.0% | |
| ! | ATGGGGGCTGGCGGTGGAAG+AGG | - | chr8_1:17739903-17739922 | None:intergenic | 70.0% |
| CTTCCACCGCCAGCCCCCAT+TGG | + | chr8_1:17739903-17739922 | Msa1182620:CDS | 70.0% | |
| GTGGCGGCTCCGCCACTTCC+TGG | - | chr8_1:17736837-17736856 | None:intergenic | 75.0% | |
| GCGCCGGGAGGTAGCCCTTG+TGG | - | chr8_1:17739771-17739790 | None:intergenic | 75.0% | |
| ! | GGGGCTGGCGGTGGAAGAGG+CGG | - | chr8_1:17739900-17739919 | None:intergenic | 75.0% |
| ! | GTCCCAATGGGGGCTGGCGG+TGG | - | chr8_1:17739909-17739928 | None:intergenic | 75.0% |
| ! | GGAGGTGGAGGGGCCCGTGG+AGG | - | chr8_1:17739807-17739826 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 17736727 | 17740283 | 17736727 | ID=Msa1182620;Name=Msa1182620 |
| chr8_1 | mRNA | 17736727 | 17740283 | 17736727 | ID=Msa1182620-mRNA-1;Parent=Msa1182620;Name=Msa1182620-mRNA-1;_AED=0.08;_eAED=0.08;_QI=83|1|1|1|1|1|6|297|326 |
| chr8_1 | exon | 17736727 | 17737131 | 17736727 | ID=Msa1182620-mRNA-1:exon:6653;Parent=Msa1182620-mRNA-1 |
| chr8_1 | exon | 17737240 | 17737316 | 17737240 | ID=Msa1182620-mRNA-1:exon:6654;Parent=Msa1182620-mRNA-1 |
| chr8_1 | exon | 17738990 | 17739055 | 17738990 | ID=Msa1182620-mRNA-1:exon:6655;Parent=Msa1182620-mRNA-1 |
| chr8_1 | exon | 17739207 | 17739281 | 17739207 | ID=Msa1182620-mRNA-1:exon:6656;Parent=Msa1182620-mRNA-1 |
| chr8_1 | exon | 17739394 | 17739468 | 17739394 | ID=Msa1182620-mRNA-1:exon:6657;Parent=Msa1182620-mRNA-1 |
| chr8_1 | exon | 17739621 | 17740283 | 17739621 | ID=Msa1182620-mRNA-1:exon:6658;Parent=Msa1182620-mRNA-1 |
| chr8_1 | five_prime_UTR | 17736727 | 17736809 | 17736727 | ID=Msa1182620-mRNA-1:five_prime_utr;Parent=Msa1182620-mRNA-1 |
| chr8_1 | CDS | 17736810 | 17737131 | 17736810 | ID=Msa1182620-mRNA-1:cds;Parent=Msa1182620-mRNA-1 |
| chr8_1 | CDS | 17737240 | 17737316 | 17737240 | ID=Msa1182620-mRNA-1:cds;Parent=Msa1182620-mRNA-1 |
| chr8_1 | CDS | 17738990 | 17739055 | 17738990 | ID=Msa1182620-mRNA-1:cds;Parent=Msa1182620-mRNA-1 |
| chr8_1 | CDS | 17739207 | 17739281 | 17739207 | ID=Msa1182620-mRNA-1:cds;Parent=Msa1182620-mRNA-1 |
| chr8_1 | CDS | 17739394 | 17739468 | 17739394 | ID=Msa1182620-mRNA-1:cds;Parent=Msa1182620-mRNA-1 |
| chr8_1 | CDS | 17739621 | 17739986 | 17739621 | ID=Msa1182620-mRNA-1:cds;Parent=Msa1182620-mRNA-1 |
| chr8_1 | three_prime_UTR | 17739987 | 17740283 | 17739987 | ID=Msa1182620-mRNA-1:three_prime_utr;Parent=Msa1182620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
