Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407640 | XP_003630940.1 | 100.000 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407640 | sp|Q9ES53|UFD1_RAT | 53.478 | 230 | 101 | 3 | 13 | 238 | 19 | 246 | 9.91e-82 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407640 | G7LAK8 | 100.000 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 0.0 | 663 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1407640 | 0.815626 | 8.397090e-52 | -8.615850e-47 |
| Msa0017510 | Msa1407640 | -0.813244 | 2.823977e-51 | -8.615850e-47 |
| Msa0091210 | Msa1407640 | 0.804289 | 2.319997e-49 | -8.615850e-47 |
| Msa1364470 | Msa1407640 | 0.822896 | 1.853002e-53 | -8.615850e-47 |
| Msa1367080 | Msa1407640 | -0.807201 | 5.673104e-50 | -8.615850e-47 |
| Msa1407640 | Msa1413270 | 0.814898 | 1.218753e-51 | -8.615850e-47 |
| Msa1407640 | Msa1423880 | -0.806760 | 7.033295e-50 | -8.615850e-47 |
| Msa1407640 | Msa1425680 | 0.813652 | 2.296656e-51 | -8.615850e-47 |
| Msa0637710 | Msa1407640 | -0.821818 | 3.298757e-53 | -8.615850e-47 |
| Msa0710070 | Msa1407640 | -0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0757500 | Msa1407640 | 0.819879 | 9.211804e-53 | -8.615850e-47 |
| Msa0777570 | Msa1407640 | 0.804336 | 2.268722e-49 | -8.615850e-47 |
| Msa0157290 | Msa1407640 | -0.812818 | 3.501265e-51 | -8.615850e-47 |
| Msa0215320 | Msa1407640 | 0.865631 | 5.133192e-65 | -8.615850e-47 |
| Msa1237820 | Msa1407640 | -0.827645 | 1.395542e-54 | -8.615850e-47 |
| Msa1238930 | Msa1407640 | -0.817232 | 3.669616e-52 | -8.615850e-47 |
| Msa1335860 | Msa1407640 | -0.810836 | 9.455791e-51 | -8.615850e-47 |
| Msa0392180 | Msa1407640 | -0.814811 | 1.273863e-51 | -8.615850e-47 |
| Msa0395790 | Msa1407640 | -0.803763 | 2.984867e-49 | -8.615850e-47 |
| Msa0396060 | Msa1407640 | -0.800855 | 1.184935e-48 | -8.615850e-47 |
| Msa0412970 | Msa1407640 | -0.808998 | 2.351013e-50 | -8.615850e-47 |
| Msa0443260 | Msa1407640 | -0.808249 | 3.397873e-50 | -8.615850e-47 |
| Msa0994030 | Msa1407640 | -0.817407 | 3.351262e-52 | -8.615850e-47 |
| Msa1000180 | Msa1407640 | -0.818394 | 2.005688e-52 | -8.615850e-47 |
| Msa1075220 | Msa1407640 | 0.821810 | 3.313208e-53 | -8.615850e-47 |
| Msa1094200 | Msa1407640 | -0.808278 | 3.350864e-50 | -8.615850e-47 |
| Msa1102300 | Msa1407640 | 0.810830 | 9.485509e-51 | -8.615850e-47 |
| Msa0294560 | Msa1407640 | 0.809056 | 2.284543e-50 | -8.615850e-47 |
| Msa0302580 | Msa1407640 | 0.867670 | 1.153158e-65 | -8.615850e-47 |
| Msa0340450 | Msa1407640 | -0.808606 | 2.851473e-50 | -8.615850e-47 |
| Msa1113170 | Msa1407640 | -0.812783 | 3.562592e-51 | -8.615850e-47 |
| Msa1121450 | Msa1407640 | 0.829635 | 4.611355e-55 | -8.615850e-47 |
| Msa1130270 | Msa1407640 | 0.821647 | 3.612645e-53 | -8.615850e-47 |
| Msa1139000 | Msa1407640 | 0.805085 | 1.582467e-49 | -8.615850e-47 |
| Msa1145250 | Msa1407640 | 0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa1150700 | Msa1407640 | 0.817694 | 2.887913e-52 | -8.615850e-47 |
| Msa1162550 | Msa1407640 | 0.829379 | 5.320722e-55 | -8.615850e-47 |
| Msa1182620 | Msa1407640 | 0.825288 | 5.086355e-54 | -8.615850e-47 |
| Msa1183100 | Msa1407640 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa1193340 | Msa1407640 | -0.805216 | 1.485661e-49 | -8.615850e-47 |
| Msa1222970 | Msa1407640 | -0.808877 | 2.495825e-50 | -8.615850e-47 |
| Msa0574760 | Msa1407640 | 0.806574 | 7.700493e-50 | -8.615850e-47 |
| Msa0575270 | Msa1407640 | -0.818747 | 1.668255e-52 | -8.615850e-47 |
| Msa0581760 | Msa1407640 | -0.816096 | 6.595810e-52 | -8.615850e-47 |
| Msa0843260 | Msa1407640 | -0.801454 | 8.935401e-49 | -8.615850e-47 |
| Msa0849100 | Msa1407640 | -0.803157 | 3.985856e-49 | -8.615850e-47 |
| Msa0870530 | Msa1407640 | -0.803401 | 3.548095e-49 | -8.615850e-47 |
| Msa0880140 | Msa1407640 | -0.811197 | 7.896531e-51 | -8.615850e-47 |
| Msa0930830 | Msa1407640 | 0.994530 | 5.165572e-208 | -8.615850e-47 |
| Msa0970630 | Msa1407640 | 0.802356 | 5.832765e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407640 | MtrunA17_Chr8g0391701 | 100.000 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 0.0 | 663 |
| Msa1407640 | MtrunA17_Chr4g0031781 | 56.180 | 267 | 103 | 3 | 55 | 319 | 1 | 255 | 1.58e-100 | 296 |
| Msa1407640 | MtrunA17_Chr4g0031801 | 53.558 | 267 | 110 | 3 | 55 | 319 | 1 | 255 | 1.08e-95 | 283 |
| Msa1407640 | MtrunA17_Chr4g0031811 | 54.307 | 267 | 108 | 2 | 55 | 319 | 1 | 255 | 3.29e-95 | 282 |
| Msa1407640 | MtrunA17_Chr5g0439731 | 38.122 | 181 | 85 | 4 | 32 | 189 | 90 | 266 | 1.17e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407640 | AT2G21270.5 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa1407640 | AT2G21270.2 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa1407640 | AT2G21270.4 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa1407640 | AT2G21270.1 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa1407640 | AT2G21270.3 | 76.780 | 323 | 68 | 5 | 1 | 320 | 22 | 340 | 1.88e-174 | 487 |
| Msa1407640 | AT4G38930.2 | 70.093 | 321 | 89 | 2 | 1 | 320 | 1 | 315 | 4.86e-165 | 462 |
| Msa1407640 | AT4G38930.3 | 70.093 | 321 | 89 | 2 | 1 | 320 | 1 | 315 | 4.86e-165 | 462 |
| Msa1407640 | AT4G38930.4 | 71.028 | 321 | 82 | 4 | 1 | 320 | 1 | 311 | 7.44e-165 | 461 |
| Msa1407640 | AT4G38930.1 | 71.028 | 321 | 82 | 4 | 1 | 320 | 1 | 311 | 7.44e-165 | 461 |
| Msa1407640 | AT2G29070.2 | 60.635 | 315 | 113 | 5 | 10 | 320 | 5 | 312 | 1.17e-135 | 387 |
| Msa1407640 | AT2G29070.1 | 59.582 | 287 | 105 | 5 | 38 | 320 | 1 | 280 | 2.07e-118 | 342 |
| Msa1407640 | AT2G29070.3 | 51.813 | 193 | 82 | 5 | 132 | 320 | 11 | 196 | 2.77e-53 | 173 |
| Msa1407640 | AT4G15420.1 | 40.123 | 162 | 88 | 4 | 32 | 184 | 90 | 251 | 5.52e-27 | 111 |
| Msa1407640 | AT4G15420.2 | 40.123 | 162 | 88 | 4 | 32 | 184 | 213 | 374 | 6.24e-27 | 111 |
Find 111 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTTCTTCTTTCTCTT+TGG | 0.145615 | tig0023317:-72993 | None:intergenic |
| CACAAAGTAATAATAATTTA+AGG | 0.192642 | tig0023317:-73215 | None:intergenic |
| GATATTTGCTGCAAATTAAA+AGG | 0.193829 | tig0023317:-73293 | None:intergenic |
| CTCCACCAGTTTCTTCTTCC+GGG | 0.205032 | tig0023317:+72685 | Msa1407640:CDS |
| GATGCAACCCTTTACTTTAA+AGG | 0.205872 | tig0023317:+73269 | Msa1407640:three_prime_UTR |
| CGTGGAGCAACGGGCCTTTC+AGG | 0.207292 | tig0023317:-71794 | None:intergenic |
| AAGAAGTGGTATTACCTTTC+CGG | 0.212674 | tig0023317:-72838 | None:intergenic |
| CCGGGAAGAAGTATTCTTTA+AGG | 0.227291 | tig0023317:+73029 | Msa1407640:CDS |
| CGTCTCCCAGATCCAGTAAA+TGG | 0.228162 | tig0023317:-72633 | None:intergenic |
| CCTCCACCAGTTTCTTCTTC+CGG | 0.229434 | tig0023317:+72684 | Msa1407640:CDS |
| CCAAAGTTCAACCCATTTAC+TGG | 0.248848 | tig0023317:+72621 | Msa1407640:CDS |
| TTATCTTCTTCTTTCTCTTT+GGG | 0.250840 | tig0023317:-72992 | None:intergenic |
| GGCAAACCATTACCAGCTTC+TGG | 0.251775 | tig0023317:-71833 | None:intergenic |
| ACCAGCTTCTGGGGCCTTTC+CGG | 0.257803 | tig0023317:-71822 | None:intergenic |
| TTCAGGTTCCTTGTAATCTA+AGG | 0.276898 | tig0023317:-71777 | None:intergenic |
| GCCTCACACAAAAGACTTCT+TGG | 0.277768 | tig0023317:+69631 | Msa1407640:CDS |
| TTCAACCCATTTACTGGATC+TGG | 0.281619 | tig0023317:+72627 | Msa1407640:CDS |
| TTCTCAGATCAACCATTATC+AGG | 0.286140 | tig0023317:+67878 | Msa1407640:five_prime_UTR |
| GGTTTCTCATTGTGGTGTTC+TGG | 0.292912 | tig0023317:+69368 | Msa1407640:CDS |
| CCGGTCTCTTTACCGCGGTT+TGG | 0.328464 | tig0023317:-72819 | None:intergenic |
| ATGCAACCCTTTACTTTAAA+GGG | 0.338587 | tig0023317:+73270 | Msa1407640:three_prime_UTR |
| ACTCAGGGCAAGCTTGTGTT+TGG | 0.343149 | tig0023317:+72789 | Msa1407640:CDS |
| GCATGATATACATGCCATAC+TGG | 0.346272 | tig0023317:+69409 | Msa1407640:CDS |
| TTTGTCACCACTTTCAAGTT+GGG | 0.347179 | tig0023317:-69063 | None:intergenic |
| TCAATCATCACAATACAAAA+TGG | 0.360357 | tig0023317:+68185 | Msa1407640:exon |
| CGGGAAGAAGTATTCTTTAA+GGG | 0.362589 | tig0023317:+73030 | Msa1407640:CDS |
| AAAAGGCCCTTTAAAGTAAA+GGG | 0.371200 | tig0023317:-73276 | None:intergenic |
| ACAAGCTTGCCCTGAGTTTG+AGG | 0.372265 | tig0023317:-72783 | None:intergenic |
| AACTTTGGTTCAGTTTCAGC+AGG | 0.376076 | tig0023317:-72606 | None:intergenic |
| AGCAGCAGGATTCTTGTCCT+TGG | 0.380093 | tig0023317:-72709 | None:intergenic |
| AACTTAACATATGTTCCCTT+TGG | 0.397023 | tig0023317:-69605 | None:intergenic |
| CCTTAAAGAATACTTCTTCC+CGG | 0.399493 | tig0023317:-73029 | None:intergenic |
| TAAAAGGCCCTTTAAAGTAA+AGG | 0.401473 | tig0023317:-73277 | None:intergenic |
| GCAAACCATTACCAGCTTCT+GGG | 0.410537 | tig0023317:-71832 | None:intergenic |
| CCGGCAGAACGTGGAGCAAC+GGG | 0.425151 | tig0023317:-71803 | None:intergenic |
| GACTACTGGAGATAGCATTA+TGG | 0.427680 | tig0023317:+71652 | Msa1407640:CDS |
| CCAGTAAATGGGTTGAACTT+TGG | 0.434917 | tig0023317:-72621 | None:intergenic |
| CGCCCCGCCCTTAGATTACA+AGG | 0.435875 | tig0023317:+71769 | Msa1407640:CDS |
| CTTGGATATTTCCAATCCTA+AGG | 0.447761 | tig0023317:+69649 | Msa1407640:CDS |
| AATGAACACGTATTCTTCTC+TGG | 0.449226 | tig0023317:+73238 | Msa1407640:three_prime_UTR |
| CTCAGGGCAAGCTTGTGTTT+GGG | 0.462423 | tig0023317:+72790 | Msa1407640:CDS |
| GACTCACATGGCCTTAGGAT+TGG | 0.462854 | tig0023317:-69660 | None:intergenic |
| AAGTAATGCTCCTCAAACTC+AGG | 0.463360 | tig0023317:+72773 | Msa1407640:CDS |
| TCGTAATGCTGCTGCTGAGC+GGG | 0.469762 | tig0023317:+69347 | Msa1407640:CDS |
| GATAAGTTTCAGCCTTTCAC+CGG | 0.469983 | tig0023317:+73010 | Msa1407640:CDS |
| GCCGGAAAGGCCCCAGAAGC+TGG | 0.470690 | tig0023317:+71821 | Msa1407640:CDS |
| ACATCGACTCACATGGCCTT+AGG | 0.479482 | tig0023317:-69665 | None:intergenic |
| CTCAATGATGCTTATAGCAT+TGG | 0.484222 | tig0023317:-71726 | None:intergenic |
| GTTCCTTGTAATCTAAGGGC+GGG | 0.489115 | tig0023317:-71772 | None:intergenic |
| AGGATTCTTGTCCTTGGACC+CGG | 0.493138 | tig0023317:-72703 | None:intergenic |
| GTCTCCCAGATCCAGTAAAT+GGG | 0.494698 | tig0023317:-72632 | None:intergenic |
| TACTGGATCTGGGAGACGCT+TGG | 0.495783 | tig0023317:+72638 | Msa1407640:CDS |
| TTGTCACCACTTTCAAGTTG+GGG | 0.497338 | tig0023317:-69062 | None:intergenic |
| TCTTCTTCTTTCTCTTTGGG+TGG | 0.497605 | tig0023317:-72989 | None:intergenic |
| TCAGGTTCCTTGTAATCTAA+GGG | 0.497668 | tig0023317:-71776 | None:intergenic |
| AGCTTGAAGACTTGACACTT+TGG | 0.500655 | tig0023317:+68158 | Msa1407640:five_prime_UTR |
| TGCTCCACGTTCTGCCGGAA+AGG | 0.501088 | tig0023317:+71808 | Msa1407640:CDS |
| CCCGTTGCTCCACGTTCTGC+CGG | 0.501489 | tig0023317:+71803 | Msa1407640:CDS |
| TTGGACCCGGAAGAAGAAAC+TGG | 0.507831 | tig0023317:-72690 | None:intergenic |
| ATAACTAACCTAGACGATCA+AGG | 0.507878 | tig0023317:-69192 | None:intergenic |
| GTATTCTTCTCTGGAGCAAA+GGG | 0.508926 | tig0023317:+73247 | Msa1407640:three_prime_UTR |
| TTCGATGGATATGGATATCA+CGG | 0.509344 | tig0023317:+68701 | Msa1407640:CDS |
| TTACTTCGTTGGCCTGTGCA+TGG | 0.513408 | tig0023317:+73099 | Msa1407640:three_prime_UTR |
| GAATACTTCTTCCCGGTGAA+AGG | 0.517126 | tig0023317:-73022 | None:intergenic |
| TCCGGCAGAACGTGGAGCAA+CGG | 0.519164 | tig0023317:-71804 | None:intergenic |
| CCTAGACGATCAAGGGCTGA+TGG | 0.520566 | tig0023317:-69184 | None:intergenic |
| TCAACCCATTTACTGGATCT+GGG | 0.520842 | tig0023317:+72628 | Msa1407640:CDS |
| CTGGAGTTCATTGCTGAGGA+AGG | 0.523879 | tig0023317:+69387 | Msa1407640:CDS |
| AGTTTCTTCTTCCGGGTCCA+AGG | 0.526442 | tig0023317:+72692 | Msa1407640:CDS |
| TTTATTACAAGTTACTTCGT+TGG | 0.528532 | tig0023317:+73088 | Msa1407640:three_prime_UTR |
| CCATCAGCCCTTGATCGTCT+AGG | 0.532282 | tig0023317:+69184 | Msa1407640:CDS |
| GCTATCTCCAGTAGTCAAGC+AGG | 0.533210 | tig0023317:-71645 | None:intergenic |
| CGTATTCTTCTCTGGAGCAA+AGG | 0.541055 | tig0023317:+73246 | Msa1407640:three_prime_UTR |
| ATGATGCTTATAGCATTGGC+AGG | 0.543569 | tig0023317:-71722 | None:intergenic |
| CTGCAGCCCCAACTTGAAAG+TGG | 0.545884 | tig0023317:+69056 | Msa1407640:intron |
| CATGATATACATGCCATACT+GGG | 0.549712 | tig0023317:+69410 | Msa1407640:CDS |
| GGGGCCTTTCCGGCAGAACG+TGG | 0.552419 | tig0023317:-71812 | None:intergenic |
| GCTGAGCGGGTTTCTCATTG+TGG | 0.560946 | tig0023317:+69360 | Msa1407640:CDS |
| TTCCTTGTAATCTAAGGGCG+GGG | 0.562049 | tig0023317:-71771 | None:intergenic |
| CCAAACCGCGGTAAAGAGAC+CGG | 0.562944 | tig0023317:+72819 | Msa1407640:CDS |
| TCGATGGATATGGATATCAC+GGG | 0.569332 | tig0023317:+68702 | Msa1407640:CDS |
| CATTGAGACCGACTGTGAAG+TGG | 0.571055 | tig0023317:+71742 | Msa1407640:CDS |
| ACTTTGGTTCAGTTTCAGCA+GGG | 0.574254 | tig0023317:-72605 | None:intergenic |
| GGATCTGGGAGACGCTTGGA+CGG | 0.577239 | tig0023317:+72642 | Msa1407640:CDS |
| GGGAAGAAGTATTCTTTAAG+GGG | 0.578462 | tig0023317:+73031 | Msa1407640:CDS |
| CTTTGGTTCAGTTTCAGCAG+GGG | 0.579771 | tig0023317:-72604 | None:intergenic |
| ATAGACTTGGATCCATGCAC+AGG | 0.580648 | tig0023317:-73111 | None:intergenic |
| ATTATAAGCAAAAGACTGAC+CGG | 0.589350 | tig0023317:+73165 | Msa1407640:three_prime_UTR |
| TTCGTAATGCTGCTGCTGAG+CGG | 0.597157 | tig0023317:+69346 | Msa1407640:CDS |
| GGTTCCTTGTAATCTAAGGG+CGG | 0.597744 | tig0023317:-71773 | None:intergenic |
| TCTCTCTTTGTAGGCAACCG+AGG | 0.598775 | tig0023317:+72949 | Msa1407640:intron |
| GGCGAAGTCCACTTCACAGT+CGG | 0.599655 | tig0023317:-71750 | None:intergenic |
| TAACTAACCTAGACGATCAA+GGG | 0.601848 | tig0023317:-69191 | None:intergenic |
| ATAATGGTTGATCTGAGAAG+AGG | 0.605474 | tig0023317:-67874 | None:intergenic |
| CAAACCATTACCAGCTTCTG+GGG | 0.606173 | tig0023317:-71831 | None:intergenic |
| GGTGGAGGCTGATAATTCAA+AGG | 0.609376 | tig0023317:-72669 | None:intergenic |
| ATAAGTTTCAGCCTTTCACC+GGG | 0.612687 | tig0023317:+73011 | Msa1407640:CDS |
| ACTTTGTGAACTAGAAGCTG+TGG | 0.614635 | tig0023317:-72754 | None:intergenic |
| CCGGAAGAAGAAACTGGTGG+AGG | 0.618481 | tig0023317:-72684 | None:intergenic |
| TGTTCTGGAGTTCATTGCTG+AGG | 0.630474 | tig0023317:+69383 | Msa1407640:CDS |
| TAGATTACAAGGAACCTGAA+AGG | 0.641772 | tig0023317:+71780 | Msa1407640:CDS |
| GACCCGGAAGAAGAAACTGG+TGG | 0.649986 | tig0023317:-72687 | None:intergenic |
| TACTGGAGATAGCATTATGG+TGG | 0.650470 | tig0023317:+71655 | Msa1407640:CDS |
| AGTAATGCTCCTCAAACTCA+GGG | 0.668072 | tig0023317:+72774 | Msa1407640:CDS |
| TGTGAACTAGAAGCTGTGGA+AGG | 0.673745 | tig0023317:-72750 | None:intergenic |
| GCAGCTTGGAAACTACATTG+AGG | 0.674859 | tig0023317:+71615 | Msa1407640:intron |
| AGACGATCAAGGGCTGATGG+AGG | 0.677129 | tig0023317:-69181 | None:intergenic |
| TTACGAAGTTCAAACAACAT+CGG | 0.689875 | tig0023317:-69330 | None:intergenic |
| CCGCGGTAAAGAGACCGGAA+AGG | 0.690679 | tig0023317:+72824 | Msa1407640:CDS |
| CCTTTCCGGTCTCTTTACCG+CGG | 0.712916 | tig0023317:-72824 | None:intergenic |
| TTTGGGTCAAATCCAAACCG+CGG | 0.728144 | tig0023317:+72807 | Msa1407640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGTTTCTTAAATAATAA+TGG | - | tig0023317:68999-69018 | None:intergenic | 10.0% |
| !!! | TTGACTTTTTATTTTAATTA+AGG | + | tig0023317:72132-72151 | Msa1407640:intron | 10.0% |
| !! | TTAAAAAAAAAAAGCAATTG+AGG | - | tig0023317:67994-68013 | None:intergenic | 15.0% |
| !! | TATGTACATAATATTAGAAA+CGG | - | tig0023317:68800-68819 | None:intergenic | 15.0% |
| !! | AAAATATGAACAAATAAATG+GGG | - | tig0023317:70226-70245 | None:intergenic | 15.0% |
| !! | GAAAATATGAACAAATAAAT+GGG | - | tig0023317:70227-70246 | None:intergenic | 15.0% |
| !! | TGAAAATATGAACAAATAAA+TGG | - | tig0023317:70228-70247 | None:intergenic | 15.0% |
| !! | ATCAATAAATCACATTAAAT+TGG | + | tig0023317:70338-70357 | Msa1407640:intron | 15.0% |
| !! | TCAATAAATCACATTAAATT+GGG | + | tig0023317:70339-70358 | Msa1407640:intron | 15.0% |
| !! | ATATTGCATAAAACATATTA+AGG | - | tig0023317:70696-70715 | None:intergenic | 15.0% |
| !! | TGTAAGAACTATATTTAATA+TGG | + | tig0023317:70723-70742 | Msa1407640:intron | 15.0% |
| !! | CAACTAAAAATATAAAAAAG+TGG | - | tig0023317:72115-72134 | None:intergenic | 15.0% |
| !!! | AATAAATATTTTTGAGACTT+CGG | + | tig0023317:72399-72418 | Msa1407640:intron | 15.0% |
| !! | CACAAAGTAATAATAATTTA+AGG | - | tig0023317:73218-73237 | None:intergenic | 15.0% |
| !! | AGTAAAAGATTGATAAGATT+TGG | - | tig0023317:67915-67934 | None:intergenic | 20.0% |
| !! | GGAAAAATTGAAGAATAATT+AGG | - | tig0023317:67945-67964 | None:intergenic | 20.0% |
| !!! | AATGCTTTTTCAATCTTTTA+GGG | + | tig0023317:67965-67984 | Msa1407640:intron | 20.0% |
| !! | TATGATTCCTATAAATGTTT+AGG | + | tig0023317:68208-68227 | Msa1407640:intron | 20.0% |
| !! | ATGATTCCTATAAATGTTTA+GGG | + | tig0023317:68209-68228 | Msa1407640:intron | 20.0% |
| !! | TTTGTACAAGTATTTGATAA+TGG | + | tig0023317:68263-68282 | Msa1407640:intron | 20.0% |
| !!! | TTGTACAAGTATTTGATAAT+GGG | + | tig0023317:68264-68283 | Msa1407640:intron | 20.0% |
| !!! | CATTACAAGTTTTTACATTT+AGG | - | tig0023317:68364-68383 | None:intergenic | 20.0% |
| !! | CTAAATGTAAAAACTTGTAA+TGG | + | tig0023317:68362-68381 | Msa1407640:intron | 20.0% |
| !! | TAATGGAAACAAATAGTTTA+GGG | + | tig0023317:68379-68398 | Msa1407640:intron | 20.0% |
| !!! | AGAGATTAATTGGATATTTT+TGG | - | tig0023317:68931-68950 | None:intergenic | 20.0% |
| !!! | ACGGCATTTTTTTTTTTTTT+TGG | - | tig0023317:70051-70070 | None:intergenic | 20.0% |
| !!! | ATCCATTGAGAATATATTTT+AGG | + | tig0023317:70106-70125 | Msa1407640:intron | 20.0% |
| !! | CAATAAATCACATTAAATTG+GGG | + | tig0023317:70340-70359 | Msa1407640:intron | 20.0% |
| !!! | GTTTCTTCTTATTTCTTTTA+TGG | + | tig0023317:71484-71503 | Msa1407640:intron | 20.0% |
| !!! | TCTTATTTCTTTTATGGTTT+TGG | + | tig0023317:71490-71509 | Msa1407640:intron | 20.0% |
| !! | GAATGTGAAAAATGTAATTA+TGG | + | tig0023317:72425-72444 | Msa1407640:intron | 20.0% |
| !! | TAATTATGGAAAATATCATC+TGG | + | tig0023317:72439-72458 | Msa1407640:intron | 20.0% |
| !!! | GTATTTTTAAATCTCAGTAA+AGG | - | tig0023317:72472-72491 | None:intergenic | 20.0% |
| !! | ACTTAAATGTTAAAAAGAAG+TGG | - | tig0023317:72855-72874 | None:intergenic | 20.0% |
| !! | CTAAAAGATTGAAAAAGCAT+TGG | - | tig0023317:67966-67985 | None:intergenic | 25.0% |
| !!! | CAATGCTTTTTCAATCTTTT+AGG | + | tig0023317:67964-67983 | Msa1407640:intron | 25.0% |
| !! | AAGTGCTTGTTAATTAGTTT+AGG | + | tig0023317:68040-68059 | Msa1407640:intron | 25.0% |
| ! | TCAATCATCACAATACAAAA+TGG | + | tig0023317:68185-68204 | Msa1407640:exon | 25.0% |
| ! | TCAAAACCCTAAACATTTAT+AGG | - | tig0023317:68218-68237 | None:intergenic | 25.0% |
| ! | TTGTACATGAATTCGATAAT+AGG | + | tig0023317:68317-68336 | Msa1407640:intron | 25.0% |
| !! | GTAATGGAAACAAATAGTTT+AGG | + | tig0023317:68378-68397 | Msa1407640:intron | 25.0% |
| !! | TTGTACAAGTATTTGATAGT+AGG | + | tig0023317:68431-68450 | Msa1407640:intron | 25.0% |
| !!! | CATCACAAGTTTTTACTTTT+AGG | - | tig0023317:68488-68507 | None:intergenic | 25.0% |
| ! | CTAAAAGTAAAAACTTGTGA+TGG | + | tig0023317:68486-68505 | Msa1407640:intron | 25.0% |
| !! | TACATGTCGATTATTTATTG+AGG | + | tig0023317:68850-68869 | Msa1407640:intron | 25.0% |
| !! | ACATGTCGATTATTTATTGA+GGG | + | tig0023317:68851-68870 | Msa1407640:intron | 25.0% |
| ! | TTCAAAAAACTCAAAAAGCA+TGG | - | tig0023317:69104-69123 | None:intergenic | 25.0% |
| !! | TGTTCAGAAACAAAAACTTT+TGG | - | tig0023317:69443-69462 | None:intergenic | 25.0% |
| ! | TTAATTGAAATGCTCTTCAT+GGG | + | tig0023317:69511-69530 | Msa1407640:intron | 25.0% |
| !! | CACACTTAAGTTAGAATTTT+GGG | - | tig0023317:69863-69882 | None:intergenic | 25.0% |
| !! | ACACACTTAAGTTAGAATTT+TGG | - | tig0023317:69864-69883 | None:intergenic | 25.0% |
| ! | AAATTCTAACTTAAGTGTGT+AGG | + | tig0023317:69864-69883 | Msa1407640:intron | 25.0% |
| ! | ATTGTTAGGAATTGTTTAAC+CGG | + | tig0023317:69933-69952 | Msa1407640:intron | 25.0% |
| ! | AAAAAAAAAAAAATGCCGTC+CGG | + | tig0023317:70052-70071 | Msa1407640:intron | 25.0% |
| ! | TGCCTAAAATATATTCTCAA+TGG | - | tig0023317:70111-70130 | None:intergenic | 25.0% |
| ! | GCGATTAAACATAGTTATAT+TGG | + | tig0023317:70486-70505 | Msa1407640:intron | 25.0% |
| ! | ATGGTCGATTAAAAGTTATT+GGG | - | tig0023317:70535-70554 | None:intergenic | 25.0% |
| ! | AACTCTACATCATTATGTAT+GGG | - | tig0023317:70640-70659 | None:intergenic | 25.0% |
| ! | AAACTCTACATCATTATGTA+TGG | - | tig0023317:70641-70660 | None:intergenic | 25.0% |
| ! | ATACATAATGATGTAGAGTT+TGG | + | tig0023317:70640-70659 | Msa1407640:intron | 25.0% |
| ! | TATACTTCTGCATCATTATT+TGG | + | tig0023317:71288-71307 | Msa1407640:intron | 25.0% |
| ! | ATACTTCTGCATCATTATTT+GGG | + | tig0023317:71289-71308 | Msa1407640:intron | 25.0% |
| ! | AAAAAATTACAAGGGGAAAT+CGG | - | tig0023317:71382-71401 | None:intergenic | 25.0% |
| !!! | ATTTTGCCGTTTCAAAAAAA+AGG | + | tig0023317:71452-71471 | Msa1407640:intron | 25.0% |
| !!! | TTTTGCCGTTTCAAAAAAAA+GGG | + | tig0023317:71453-71472 | Msa1407640:intron | 25.0% |
| ! | CCAAAATGACAAAATTAAGT+TGG | - | tig0023317:71857-71876 | None:intergenic | 25.0% |
| !!! | CCAACTTAATTTTGTCATTT+TGG | + | tig0023317:71854-71873 | Msa1407640:intron | 25.0% |
| ! | TATTGGAAGCTTATTATAAG+AGG | + | tig0023317:71948-71967 | Msa1407640:intron | 25.0% |
| !!! | TAGTATTTTAGTTGTTCTGT+TGG | + | tig0023317:72257-72276 | Msa1407640:intron | 25.0% |
| ! | AACAATATAGTAGAACAAAG+GGG | - | tig0023317:72371-72390 | None:intergenic | 25.0% |
| ! | CAACAATATAGTAGAACAAA+GGG | - | tig0023317:72372-72391 | None:intergenic | 25.0% |
| ! | TAAAAATACTGCTGAGTTAA+AGG | + | tig0023317:72483-72502 | Msa1407640:intron | 25.0% |
| ! | TTATCTTCTTCTTTCTCTTT+GGG | - | tig0023317:72995-73014 | None:intergenic | 25.0% |
| ! | TTTATTACAAGTTACTTCGT+TGG | + | tig0023317:73088-73107 | Msa1407640:three_prime_UTR | 25.0% |
| !!! | GGTAAACATGTTATTTTTTG+TGG | - | tig0023317:73197-73216 | None:intergenic | 25.0% |
| !! | GATATTTGCTGCAAATTAAA+AGG | - | tig0023317:73296-73315 | None:intergenic | 25.0% |
| GTAGAGAAAAAACCTGATAA+TGG | - | tig0023317:67893-67912 | None:intergenic | 30.0% | |
| ATGTACAAATTTACTCTCAG+AGG | + | tig0023317:68134-68153 | Msa1407640:intron | 30.0% | |
| TGTACAAATTTACTCTCAGA+GGG | + | tig0023317:68135-68154 | Msa1407640:intron | 30.0% | |
| GTTAAGTACGAGAGATTAAT+TGG | - | tig0023317:68941-68960 | None:intergenic | 30.0% | |
| ! | CAACATTTTTCACATTAGAC+AGG | - | tig0023317:69145-69164 | None:intergenic | 30.0% |
| ! | TGTATTTTGCATTCTTTTCC+CGG | + | tig0023317:69233-69252 | Msa1407640:intron | 30.0% |
| TAAATAAGACGCATATTCAC+CGG | - | tig0023317:69255-69274 | None:intergenic | 30.0% | |
| !! | GTGAATATGCGTCTTATTTA+TGG | + | tig0023317:69255-69274 | Msa1407640:intron | 30.0% |
| TTACGAAGTTCAAACAACAT+CGG | - | tig0023317:69333-69352 | None:intergenic | 30.0% | |
| CAATTAACGTCAAAACTCAA+AGG | - | tig0023317:69498-69517 | None:intergenic | 30.0% | |
| GTTAATTGAAATGCTCTTCA+TGG | + | tig0023317:69510-69529 | Msa1407640:intron | 30.0% | |
| AAAAATGTGACACTTCCAAA+GGG | + | tig0023317:69590-69609 | Msa1407640:CDS | 30.0% | |
| AACTTAACATATGTTCCCTT+TGG | - | tig0023317:69608-69627 | None:intergenic | 30.0% | |
| TGATCTAGTGATTGATATTG+TGG | + | tig0023317:69827-69846 | Msa1407640:intron | 30.0% | |
| !! | TTAGAATTTTGGGTGAAAGT+GGG | - | tig0023317:69853-69872 | None:intergenic | 30.0% |
| ! | AAATAACCAAAAGTACATGC+TGG | - | tig0023317:69906-69925 | None:intergenic | 30.0% |
| !! | TGTACTTTTGGTTATTTCGT+AGG | + | tig0023317:69909-69928 | Msa1407640:intron | 30.0% |
| ! | GTTATTTCGTAGGAATTGTT+AGG | + | tig0023317:69919-69938 | Msa1407640:intron | 30.0% |
| ! | TACAAAATATAGCACTGAAC+CGG | - | tig0023317:69955-69974 | None:intergenic | 30.0% |
| ! | AGCCTTACCTTATTTACAAT+AGG | + | tig0023317:70130-70149 | Msa1407640:intron | 30.0% |
| AGCCTATTGTAAATAAGGTA+AGG | - | tig0023317:70135-70154 | None:intergenic | 30.0% | |
| ! | TACCTTATTTACAATAGGCT+TGG | + | tig0023317:70135-70154 | Msa1407640:intron | 30.0% |
| AACCAAGCCTATTGTAAATA+AGG | - | tig0023317:70140-70159 | None:intergenic | 30.0% | |
| !! | AGCTTGATTTGTTATCACAT+TGG | + | tig0023317:70380-70399 | Msa1407640:intron | 30.0% |
| ! | GGTTTATATATTTCTGTGTG+TGG | + | tig0023317:70401-70420 | Msa1407640:intron | 30.0% |
| ACATTCACGGTTAAATCAAA+TGG | - | tig0023317:70464-70483 | None:intergenic | 30.0% | |
| GATGGTCGATTAAAAGTTAT+TGG | - | tig0023317:70536-70555 | None:intergenic | 30.0% | |
| TACTTCTGCATCATTATTTG+GGG | + | tig0023317:71290-71309 | Msa1407640:intron | 30.0% | |
| !!! | TTCTTTTTGGGTGGTTTTTA+AGG | + | tig0023317:71324-71343 | Msa1407640:intron | 30.0% |
| !!! | TCTTTTTGGGTGGTTTTTAA+GGG | + | tig0023317:71325-71344 | Msa1407640:intron | 30.0% |
| AGGTGGGAAAAAAATTACAA+GGG | - | tig0023317:71390-71409 | None:intergenic | 30.0% | |
| !!! | TGCTTCCCTTTTTTTTGAAA+CGG | - | tig0023317:71461-71480 | None:intergenic | 30.0% |
| !!! | ATCCTTTTTTGTGTATGTGT+GGG | + | tig0023317:71999-72018 | Msa1407640:intron | 30.0% |
| ! | ACATCATGCTACTTAAAGAT+TGG | - | tig0023317:72164-72183 | None:intergenic | 30.0% |
| AAGTAGCATGATGTTTATGT+TGG | + | tig0023317:72170-72189 | Msa1407640:intron | 30.0% | |
| !!! | TGGTTTTTTTAAGTAAGAGC+TGG | + | tig0023317:72190-72209 | Msa1407640:intron | 30.0% |
| TTAAGTAAGAGCTGGTAATA+TGG | + | tig0023317:72198-72217 | Msa1407640:intron | 30.0% | |
| AAACCAATATGAGGAGTTAA+AGG | - | tig0023317:72315-72334 | None:intergenic | 30.0% | |
| CTAAGGTTTAAACCAATATG+AGG | - | tig0023317:72324-72343 | None:intergenic | 30.0% | |
| GCAACAATATAGTAGAACAA+AGG | - | tig0023317:72373-72392 | None:intergenic | 30.0% | |
| !!! | AATATTTTTGAGACTTCGGT+CGG | + | tig0023317:72403-72422 | Msa1407640:intron | 30.0% |
| CTTATCTTCTTCTTTCTCTT+TGG | - | tig0023317:72996-73015 | None:intergenic | 30.0% | |
| ! | TACAAGTTTTGCAATAGACT+TGG | - | tig0023317:73127-73146 | None:intergenic | 30.0% |
| ATTATAAGCAAAAGACTGAC+CGG | + | tig0023317:73165-73184 | Msa1407640:three_prime_UTR | 30.0% | |
| !!! | TTATTTTTTGTGGCTTCTAC+CGG | - | tig0023317:73187-73206 | None:intergenic | 30.0% |
| ATGCAACCCTTTACTTTAAA+GGG | + | tig0023317:73270-73289 | Msa1407640:three_prime_UTR | 30.0% | |
| !! | AAAAGGCCCTTTAAAGTAAA+GGG | - | tig0023317:73279-73298 | None:intergenic | 30.0% |
| !! | TAAAAGGCCCTTTAAAGTAA+AGG | - | tig0023317:73280-73299 | None:intergenic | 30.0% |
| ATAATGGTTGATCTGAGAAG+AGG | - | tig0023317:67877-67896 | None:intergenic | 35.0% | |
| TTCTCAGATCAACCATTATC+AGG | + | tig0023317:67878-67897 | Msa1407640:five_prime_UTR | 35.0% | |
| TGGTGCGAGAAGAAATAATT+CGG | - | tig0023317:68524-68543 | None:intergenic | 35.0% | |
| ! | ATTATTTCTTCTCGCACCAT+CGG | + | tig0023317:68525-68544 | Msa1407640:intron | 35.0% |
| AATTTACGCGTAGAAATGAG+CGG | - | tig0023317:68565-68584 | None:intergenic | 35.0% | |
| !! | ACACAGTTTTTCGATGGATA+TGG | + | tig0023317:68692-68711 | Msa1407640:intron | 35.0% |
| TTCGATGGATATGGATATCA+CGG | + | tig0023317:68701-68720 | Msa1407640:CDS | 35.0% | |
| ! | CCTTTTCGATAAAAGAAGCA+GGG | - | tig0023317:68757-68776 | None:intergenic | 35.0% |
| ! | ACCTTTTCGATAAAAGAAGC+AGG | - | tig0023317:68758-68777 | None:intergenic | 35.0% |
| !! | TTTGTCACCACTTTCAAGTT+GGG | - | tig0023317:69066-69085 | None:intergenic | 35.0% |
| !! | TTTTGTCACCACTTTCAAGT+TGG | - | tig0023317:69067-69086 | None:intergenic | 35.0% |
| TAACTAACCTAGACGATCAA+GGG | - | tig0023317:69194-69213 | None:intergenic | 35.0% | |
| ATAACTAACCTAGACGATCA+AGG | - | tig0023317:69195-69214 | None:intergenic | 35.0% | |
| AAATAAGACGCATATTCACC+GGG | - | tig0023317:69254-69273 | None:intergenic | 35.0% | |
| CATGATATACATGCCATACT+GGG | + | tig0023317:69410-69429 | Msa1407640:CDS | 35.0% | |
| ! | GTAAGCTTGTTTCACGAATA+TGG | + | tig0023317:69468-69487 | Msa1407640:intron | 35.0% |
| ATGGGTTCTTATACAGATGA+TGG | + | tig0023317:69529-69548 | Msa1407640:intron | 35.0% | |
| ! | GAGAACATGCTTTTACAAGA+GGG | + | tig0023317:69551-69570 | Msa1407640:CDS | 35.0% |
| GAAAAATGTGACACTTCCAA+AGG | + | tig0023317:69589-69608 | Msa1407640:CDS | 35.0% | |
| CTTGGATATTTCCAATCCTA+AGG | + | tig0023317:69649-69668 | Msa1407640:CDS | 35.0% | |
| !! | TAACATAACATCGACTCACA+TGG | - | tig0023317:69675-69694 | None:intergenic | 35.0% |
| !! | GCAAGAGGTATTCATAAGTT+GGG | - | tig0023317:69725-69744 | None:intergenic | 35.0% |
| !! | TGCAAGAGGTATTCATAAGT+TGG | - | tig0023317:69726-69745 | None:intergenic | 35.0% |
| ACTTATGAATACCTCTTGCA+AGG | + | tig0023317:69726-69745 | Msa1407640:intron | 35.0% | |
| CACTGAAAGACAATGTGAAT+TGG | - | tig0023317:69782-69801 | None:intergenic | 35.0% | |
| !! | GTTAGAATTTTGGGTGAAAG+TGG | - | tig0023317:69854-69873 | None:intergenic | 35.0% |
| ! | TTGTAACCAGCATGTACTTT+TGG | + | tig0023317:69897-69916 | Msa1407640:intron | 35.0% |
| TACACCAGTATACTAGTGTT+TGG | - | tig0023317:70008-70027 | None:intergenic | 35.0% | |
| TAAATCAAACCATTGTGCCA+AGG | + | tig0023317:70198-70217 | Msa1407640:intron | 35.0% | |
| TTCTTCAGAGATGAGAGAAA+TGG | - | tig0023317:70279-70298 | None:intergenic | 35.0% | |
| ! | ATCTCTGAAGAACATTCACA+TGG | + | tig0023317:70287-70306 | Msa1407640:intron | 35.0% |
| TCACATTAAATTGGGGAATG+TGG | + | tig0023317:70347-70366 | Msa1407640:intron | 35.0% | |
| TTAAATTGGGGAATGTGGTT+TGG | + | tig0023317:70352-70371 | Msa1407640:intron | 35.0% | |
| TGTTTAATCGCGAACATTCA+CGG | - | tig0023317:70477-70496 | None:intergenic | 35.0% | |
| GTCGATTAAAAGTTATTGGG+TGG | - | tig0023317:70532-70551 | None:intergenic | 35.0% | |
| ATGTATGTGTACTTAGCCTA+CGG | + | tig0023317:70557-70576 | Msa1407640:intron | 35.0% | |
| TGGTTAATTTAATGAGCGAG+AGG | - | tig0023317:70594-70613 | None:intergenic | 35.0% | |
| CTATGTATAACGTAGTGAGA+TGG | - | tig0023317:70614-70633 | None:intergenic | 35.0% | |
| GTTCTTCTTCATCTCTCTAA+GGG | + | tig0023317:70877-70896 | Msa1407640:intron | 35.0% | |
| !!! | TGGGAGTTGTTTTTCTATAC+TGG | + | tig0023317:71214-71233 | Msa1407640:intron | 35.0% |
| !!! | GTGTCGGTTTTGTTCTTTTT+GGG | + | tig0023317:71312-71331 | Msa1407640:intron | 35.0% |
| !!! | CTTTTTGGGTGGTTTTTAAG+GGG | + | tig0023317:71326-71345 | Msa1407640:intron | 35.0% |
| GGTGGGAAAAAAATTACAAG+GGG | - | tig0023317:71389-71408 | None:intergenic | 35.0% | |
| CAGGTGGGAAAAAAATTACA+AGG | - | tig0023317:71391-71410 | None:intergenic | 35.0% | |
| ATTTACTTGCAAACACTGAC+TGG | + | tig0023317:71552-71571 | Msa1407640:intron | 35.0% | |
| ! | AATTTTTCCTGCTTGACTAC+TGG | + | tig0023317:71638-71657 | Msa1407640:CDS | 35.0% |
| CTCAATGATGCTTATAGCAT+TGG | - | tig0023317:71729-71748 | None:intergenic | 35.0% | |
| TCAGGTTCCTTGTAATCTAA+GGG | - | tig0023317:71779-71798 | None:intergenic | 35.0% | |
| ! | TTCAGGTTCCTTGTAATCTA+AGG | - | tig0023317:71780-71799 | None:intergenic | 35.0% |
| TAGATTACAAGGAACCTGAA+AGG | + | tig0023317:71780-71799 | Msa1407640:CDS | 35.0% | |
| CATGCTGCTATAATTGGTAT+TGG | + | tig0023317:71931-71950 | Msa1407640:intron | 35.0% | |
| !!! | CATCCTTTTTTGTGTATGTG+TGG | + | tig0023317:71998-72017 | Msa1407640:intron | 35.0% |
| AACCCACACATACACAAAAA+AGG | - | tig0023317:72004-72023 | None:intergenic | 35.0% | |
| TTGGGGAAGCTTATTATAAG+AGG | + | tig0023317:72038-72057 | Msa1407640:intron | 35.0% | |
| TATAGTAGAACAAAGGGGTT+GGG | - | tig0023317:72366-72385 | None:intergenic | 35.0% | |
| ATATAGTAGAACAAAGGGGT+TGG | - | tig0023317:72367-72386 | None:intergenic | 35.0% | |
| AAGAAGTGGTATTACCTTTC+CGG | - | tig0023317:72841-72860 | None:intergenic | 35.0% | |
| ! | TCTCCATTTTCTCTCTTTGT+AGG | + | tig0023317:72940-72959 | Msa1407640:intron | 35.0% |
| TTGCCTACAAAGAGAGAAAA+TGG | - | tig0023317:72946-72965 | None:intergenic | 35.0% | |
| CCTTAAAGAATACTTCTTCC+CGG | - | tig0023317:73032-73051 | None:intergenic | 35.0% | |
| !! | CGGGAAGAAGTATTCTTTAA+GGG | + | tig0023317:73030-73049 | Msa1407640:CDS | 35.0% |
| !! | GGGAAGAAGTATTCTTTAAG+GGG | + | tig0023317:73031-73050 | Msa1407640:CDS | 35.0% |
| AATGAACACGTATTCTTCTC+TGG | + | tig0023317:73238-73257 | Msa1407640:three_prime_UTR | 35.0% | |
| GATGCAACCCTTTACTTTAA+AGG | + | tig0023317:73269-73288 | Msa1407640:three_prime_UTR | 35.0% | |
| AGCTTGAAGACTTGACACTT+TGG | + | tig0023317:68158-68177 | Msa1407640:five_prime_UTR | 40.0% | |
| GGTGCGAGAAGAAATAATTC+GGG | - | tig0023317:68523-68542 | None:intergenic | 40.0% | |
| GGAAACAAAACTAATGCCGA+TGG | - | tig0023317:68544-68563 | None:intergenic | 40.0% | |
| TGTGTCAAGCATACAGTAAG+CGG | - | tig0023317:68677-68696 | None:intergenic | 40.0% | |
| !! | TGCTTGACACAGTTTTTCGA+TGG | + | tig0023317:68686-68705 | Msa1407640:intron | 40.0% |
| TCGATGGATATGGATATCAC+GGG | + | tig0023317:68702-68721 | Msa1407640:CDS | 40.0% | |
| ! | CCCTGCTTCTTTTATCGAAA+AGG | + | tig0023317:68754-68773 | Msa1407640:CDS | 40.0% |
| ! | AAAAGGTTAGCGTGCTTTTC+AGG | + | tig0023317:68771-68790 | Msa1407640:intron | 40.0% |
| ! | TTCCATGTCGATTGTTCATG+AGG | + | tig0023317:68879-68898 | Msa1407640:intron | 40.0% |
| ! | TCCATGTCGATTGTTCATGA+GGG | + | tig0023317:68880-68899 | Msa1407640:intron | 40.0% |
| !! | TTGTCACCACTTTCAAGTTG+GGG | - | tig0023317:69065-69084 | None:intergenic | 40.0% |
| TAGACAGGAACACATAGAAC+AGG | - | tig0023317:69130-69149 | None:intergenic | 40.0% | |
| GCATGATATACATGCCATAC+TGG | + | tig0023317:69409-69428 | Msa1407640:CDS | 40.0% | |
| ! | TTTTGGATGCATACCCAGTA+TGG | - | tig0023317:69426-69445 | None:intergenic | 40.0% |
| ! | GGAGAACATGCTTTTACAAG+AGG | + | tig0023317:69550-69569 | Msa1407640:CDS | 40.0% |
| ! | TCCAAGAAGTCTTTTGTGTG+AGG | - | tig0023317:69635-69654 | None:intergenic | 40.0% |
| CAACATGACATCAAACAGCA+TGG | - | tig0023317:69809-69828 | None:intergenic | 40.0% | |
| AGTATACTAGTGTTTGGCTG+GGG | - | tig0023317:70002-70021 | None:intergenic | 40.0% | |
| CAGTATACTAGTGTTTGGCT+GGG | - | tig0023317:70003-70022 | None:intergenic | 40.0% | |
| TTTACCACTGCATGACTAGA+AGG | - | tig0023317:70182-70201 | None:intergenic | 40.0% | |
| AACAAATAAATGGGGAGCCT+TGG | - | tig0023317:70218-70237 | None:intergenic | 40.0% | |
| GACATTATCAAGTGAGTGTC+AGG | + | tig0023317:70425-70444 | Msa1407640:intron | 40.0% | |
| GCTAAGTACACATACATGGA+TGG | - | tig0023317:70554-70573 | None:intergenic | 40.0% | |
| GTAGGCTAAGTACACATACA+TGG | - | tig0023317:70558-70577 | None:intergenic | 40.0% | |
| CTATGAATTCCTGTCCACTA+TGG | + | tig0023317:70771-70790 | Msa1407640:intron | 40.0% | |
| TATGGATTCAGGGAAGCAAT+TGG | + | tig0023317:70789-70808 | Msa1407640:intron | 40.0% | |
| GGTTCTTCTTCATCTCTCTA+AGG | + | tig0023317:70876-70895 | Msa1407640:intron | 40.0% | |
| ! | CTTCTGTGCTTTGTGCTTTT+GGG | + | tig0023317:70925-70944 | Msa1407640:intron | 40.0% |
| ! | TTCTGTGCTTTGTGCTTTTG+GGG | + | tig0023317:70926-70945 | Msa1407640:intron | 40.0% |
| !! | TTATGAGGGTAGTTGATGGT+AGG | + | tig0023317:71109-71128 | Msa1407640:intron | 40.0% |
| !! | GCAGTTCTTTGTGGTTTGTT+GGG | + | tig0023317:71195-71214 | Msa1407640:intron | 40.0% |
| !!! | TCTATACTGGTTTTGCTGCA+TGG | + | tig0023317:71227-71246 | Msa1407640:intron | 40.0% |
| !!! | CTATACTGGTTTTGCTGCAT+GGG | + | tig0023317:71228-71247 | Msa1407640:intron | 40.0% |
| ! | CAGAAGTATACAAGCAACAG+CGG | - | tig0023317:71278-71297 | None:intergenic | 40.0% |
| ! | TGCATCATTATTTGGGGTGT+CGG | + | tig0023317:71296-71315 | Msa1407640:intron | 40.0% |
| !!! | GGTGTCGGTTTTGTTCTTTT+TGG | + | tig0023317:71311-71330 | Msa1407640:intron | 40.0% |
| !!! | TCGGTTTTGTTCTTTTTGGG+TGG | + | tig0023317:71315-71334 | Msa1407640:intron | 40.0% |
| GACTACTGGAGATAGCATTA+TGG | + | tig0023317:71652-71671 | Msa1407640:CDS | 40.0% | |
| TACTGGAGATAGCATTATGG+TGG | + | tig0023317:71655-71674 | Msa1407640:CDS | 40.0% | |
| !! | ATGATGCTTATAGCATTGGC+AGG | - | tig0023317:71725-71744 | None:intergenic | 40.0% |
| TGGTCTCTTGTCTCTATTGT+TGG | + | tig0023317:71874-71893 | Msa1407640:intron | 40.0% | |
| GGTCTCTTGTCTCTATTGTT+GGG | + | tig0023317:71875-71894 | Msa1407640:intron | 40.0% | |
| TCTTGTCTCTATTGTTGGGA+TGG | + | tig0023317:71879-71898 | Msa1407640:intron | 40.0% | |
| CTTGTCTCTATTGTTGGGAT+GGG | + | tig0023317:71880-71899 | Msa1407640:intron | 40.0% | |
| GCAACACACATACACACATA+AGG | - | tig0023317:71912-71931 | None:intergenic | 40.0% | |
| GTGTTGCATGCTGCTATAAT+TGG | + | tig0023317:71925-71944 | Msa1407640:intron | 40.0% | |
| AGAGGTTGAATTCATGTCGT+TGG | + | tig0023317:71966-71985 | Msa1407640:intron | 40.0% | |
| GAGGTTGAATTCATGTCGTT+GGG | + | tig0023317:71967-71986 | Msa1407640:intron | 40.0% | |
| TTGAATTCATGTCGTTGGGA+TGG | + | tig0023317:71971-71990 | Msa1407640:intron | 40.0% | |
| GGTTGCATGCTGCTATAATT+GGG | + | tig0023317:72020-72039 | Msa1407640:intron | 40.0% | |
| GTTGCATGCTGCTATAATTG+GGG | + | tig0023317:71927-71946 | Msa1407640:intron | 40.0% | |
| ATTGTCTCCTTTACCAGAGT+TGG | + | tig0023317:72281-72300 | Msa1407640:intron | 40.0% | |
| GGTCCTTTAACTCCTCATAT+TGG | + | tig0023317:72309-72328 | Msa1407640:intron | 40.0% | |
| ! | AGCTCAACTTGTTTGAGCTA+AGG | - | tig0023317:72341-72360 | None:intergenic | 40.0% |
| ATAGTAGAACAAAGGGGTTG+GGG | - | tig0023317:72365-72384 | None:intergenic | 40.0% | |
| ! | ACTTTGGTTCAGTTTCAGCA+GGG | - | tig0023317:72608-72627 | None:intergenic | 40.0% |
| ! | AACTTTGGTTCAGTTTCAGC+AGG | - | tig0023317:72609-72628 | None:intergenic | 40.0% |
| !! | CCAGTAAATGGGTTGAACTT+TGG | - | tig0023317:72624-72643 | None:intergenic | 40.0% |
| CCAAAGTTCAACCCATTTAC+TGG | + | tig0023317:72621-72640 | Msa1407640:CDS | 40.0% | |
| TTCAACCCATTTACTGGATC+TGG | + | tig0023317:72627-72646 | Msa1407640:CDS | 40.0% | |
| TCAACCCATTTACTGGATCT+GGG | + | tig0023317:72628-72647 | Msa1407640:CDS | 40.0% | |
| ! | GAATTGACATTTTGAGCAGC+AGG | - | tig0023317:72726-72745 | None:intergenic | 40.0% |
| ACTTTGTGAACTAGAAGCTG+TGG | - | tig0023317:72757-72776 | None:intergenic | 40.0% | |
| AAGTAATGCTCCTCAAACTC+AGG | + | tig0023317:72773-72792 | Msa1407640:CDS | 40.0% | |
| AGTAATGCTCCTCAAACTCA+GGG | + | tig0023317:72774-72793 | Msa1407640:CDS | 40.0% | |
| TTACCACTGAAAGGAGGATA+GGG | - | tig0023317:72903-72922 | None:intergenic | 40.0% | |
| ATTACCACTGAAAGGAGGAT+AGG | - | tig0023317:72904-72923 | None:intergenic | 40.0% | |
| CATCAATTACCACTGAAAGG+AGG | - | tig0023317:72909-72928 | None:intergenic | 40.0% | |
| CTCCTTTCAGTGGTAATTGA+TGG | + | tig0023317:72907-72926 | Msa1407640:intron | 40.0% | |
| GTCCATCAATTACCACTGAA+AGG | - | tig0023317:72912-72931 | None:intergenic | 40.0% | |
| TCTTCTTCTTTCTCTTTGGG+TGG | - | tig0023317:72992-73011 | None:intergenic | 40.0% | |
| GATAAGTTTCAGCCTTTCAC+CGG | + | tig0023317:73010-73029 | Msa1407640:CDS | 40.0% | |
| ATAAGTTTCAGCCTTTCACC+GGG | + | tig0023317:73011-73030 | Msa1407640:CDS | 40.0% | |
| !! | CCGGGAAGAAGTATTCTTTA+AGG | + | tig0023317:73029-73048 | Msa1407640:CDS | 40.0% |
| !! | GTATTCTTCTCTGGAGCAAA+GGG | + | tig0023317:73247-73266 | Msa1407640:three_prime_UTR | 40.0% |
| ACCCTCATGAACAATCGACA+TGG | - | tig0023317:68884-68903 | None:intergenic | 45.0% | |
| GGTTTCTCATTGTGGTGTTC+TGG | + | tig0023317:69368-69387 | Msa1407640:CDS | 45.0% | |
| !! | TGTTCTGGAGTTCATTGCTG+AGG | + | tig0023317:69383-69402 | Msa1407640:CDS | 45.0% |
| GCCTCACACAAAAGACTTCT+TGG | + | tig0023317:69631-69650 | Msa1407640:CDS | 45.0% | |
| GTATACTAGTGTTTGGCTGG+GGG | - | tig0023317:70001-70020 | None:intergenic | 45.0% | |
| CCAGTATACTAGTGTTTGGC+TGG | - | tig0023317:70004-70023 | None:intergenic | 45.0% | |
| CCAGCCAAACACTAGTATAC+TGG | + | tig0023317:70001-70020 | Msa1407640:intron | 45.0% | |
| TACCAAACTCTTGCCATGGA+AGG | + | tig0023317:70078-70097 | Msa1407640:intron | 45.0% | |
| ACCAAACTCTTGCCATGGAA+GGG | + | tig0023317:70079-70098 | Msa1407640:intron | 45.0% | |
| TCAGAGATGAGAGAAATGGC+AGG | - | tig0023317:70275-70294 | None:intergenic | 45.0% | |
| AGAGGAGTAAACATAGCCGT+AGG | - | tig0023317:70576-70595 | None:intergenic | 45.0% | |
| TTCCTGTCCACTATGGATTC+AGG | + | tig0023317:70778-70797 | Msa1407640:intron | 45.0% | |
| TCCTGTCCACTATGGATTCA+GGG | + | tig0023317:70779-70798 | Msa1407640:intron | 45.0% | |
| TTGCTTCCCTGAATCCATAG+TGG | - | tig0023317:70788-70807 | None:intergenic | 45.0% | |
| ATTCAGGGAAGCAATTGGTG+CGG | + | tig0023317:70794-70813 | Msa1407640:intron | 45.0% | |
| !! | TAAGGGTGCAGTTTTTGTCC+TGG | + | tig0023317:70894-70913 | Msa1407640:intron | 45.0% |
| AAGCACAAAGCACAGAAGGA+CGG | - | tig0023317:70923-70942 | None:intergenic | 45.0% | |
| ! | CCAAAAGCACAAAGCACAGA+AGG | - | tig0023317:70927-70946 | None:intergenic | 45.0% |
| ! | CCTTCTGTGCTTTGTGCTTT+TGG | + | tig0023317:70924-70943 | Msa1407640:intron | 45.0% |
| ! | TCTGTGCTTTGTGCTTTTGG+GGG | + | tig0023317:70927-70946 | Msa1407640:intron | 45.0% |
| TCGGTTATGAGGGTAGTTGA+TGG | + | tig0023317:71105-71124 | Msa1407640:intron | 45.0% | |
| !! | GTAGTTGATGGTAGGAAGGT+GGG | + | tig0023317:71117-71136 | Msa1407640:intron | 45.0% |
| !!! | TGCGCTTCTGCTGTTGTTTT+TGG | + | tig0023317:71164-71183 | Msa1407640:intron | 45.0% |
| !!! | GCGCTTCTGCTGTTGTTTTT+GGG | + | tig0023317:71165-71184 | Msa1407640:intron | 45.0% |
| !!! | CGCTTCTGCTGTTGTTTTTG+GGG | + | tig0023317:71166-71185 | Msa1407640:intron | 45.0% |
| !!! | GCTTCTGCTGTTGTTTTTGG+GGG | + | tig0023317:71167-71186 | Msa1407640:intron | 45.0% |
| !!! | GCTGTTGTTTTTGGGGGTTT+AGG | + | tig0023317:71173-71192 | Msa1407640:intron | 45.0% |
| ! | GGCAGTTCTTTGTGGTTTGT+TGG | + | tig0023317:71194-71213 | Msa1407640:intron | 45.0% |
| ATCGGTTGCCACAAAGGAAT+CGG | - | tig0023317:71364-71383 | None:intergenic | 45.0% | |
| GTGCACTAATAAGCTCAGGT+GGG | - | tig0023317:71406-71425 | None:intergenic | 45.0% | |
| ! | TTGCAAACACTGACTGGAGT+TGG | + | tig0023317:71558-71577 | Msa1407640:intron | 45.0% |
| CCAAGCTGCATGAGAAAACA+TGG | - | tig0023317:71604-71623 | None:intergenic | 45.0% | |
| ! | CCATGTTTTCTCATGCAGCT+TGG | + | tig0023317:71601-71620 | Msa1407640:intron | 45.0% |
| GCAGCTTGGAAACTACATTG+AGG | + | tig0023317:71615-71634 | Msa1407640:intron | 45.0% | |
| TTCCTTGTAATCTAAGGGCG+GGG | - | tig0023317:71774-71793 | None:intergenic | 45.0% | |
| GTTCCTTGTAATCTAAGGGC+GGG | - | tig0023317:71775-71794 | None:intergenic | 45.0% | |
| GGTTCCTTGTAATCTAAGGG+CGG | - | tig0023317:71776-71795 | None:intergenic | 45.0% | |
| CAAACCATTACCAGCTTCTG+GGG | - | tig0023317:71834-71853 | None:intergenic | 45.0% | |
| GCAAACCATTACCAGCTTCT+GGG | - | tig0023317:71835-71854 | None:intergenic | 45.0% | |
| GGGTTGCATGCTGCTATAAT+TGG | + | tig0023317:72019-72038 | Msa1407640:intron | 45.0% | |
| CAGGGGCTTCTTTATCTGTA+AGG | - | tig0023317:72590-72609 | None:intergenic | 45.0% | |
| ! | CTTTGGTTCAGTTTCAGCAG+GGG | - | tig0023317:72607-72626 | None:intergenic | 45.0% |
| GTCTCCCAGATCCAGTAAAT+GGG | - | tig0023317:72635-72654 | None:intergenic | 45.0% | |
| GGTGGAGGCTGATAATTCAA+AGG | - | tig0023317:72672-72691 | None:intergenic | 45.0% | |
| TGTGAACTAGAAGCTGTGGA+AGG | - | tig0023317:72753-72772 | None:intergenic | 45.0% | |
| TTACCCTATCCTCCTTTCAG+TGG | + | tig0023317:72897-72916 | Msa1407640:intron | 45.0% | |
| !! | CTCTTGCTTTGCTTTTGCCT+CGG | - | tig0023317:72969-72988 | None:intergenic | 45.0% |
| GAATACTTCTTCCCGGTGAA+AGG | - | tig0023317:73025-73044 | None:intergenic | 45.0% | |
| ATAGACTTGGATCCATGCAC+AGG | - | tig0023317:73114-73133 | None:intergenic | 45.0% | |
| !! | CGTATTCTTCTCTGGAGCAA+AGG | + | tig0023317:73246-73265 | Msa1407640:three_prime_UTR | 45.0% |
| TTCGTAATGCTGCTGCTGAG+CGG | + | tig0023317:69346-69365 | Msa1407640:CDS | 50.0% | |
| CTGGAGTTCATTGCTGAGGA+AGG | + | tig0023317:69387-69406 | Msa1407640:CDS | 50.0% | |
| ! | GACTCACATGGCCTTAGGAT+TGG | - | tig0023317:69663-69682 | None:intergenic | 50.0% |
| !! | ACATCGACTCACATGGCCTT+AGG | - | tig0023317:69668-69687 | None:intergenic | 50.0% |
| CAGAGTTGCATCCTTGCAAG+AGG | - | tig0023317:69740-69759 | None:intergenic | 50.0% | |
| ! | AAGAGTTTGGTAGCACCGGA+CGG | - | tig0023317:70070-70089 | None:intergenic | 50.0% |
| ! | TGGCAAGAGTTTGGTAGCAC+CGG | - | tig0023317:70074-70093 | None:intergenic | 50.0% |
| GTGCTACCAAACTCTTGCCA+TGG | + | tig0023317:70074-70093 | Msa1407640:intron | 50.0% | |
| ACCCTTCCATGGCAAGAGTT+TGG | - | tig0023317:70083-70102 | None:intergenic | 50.0% | |
| AACTCTTGCCATGGAAGGGT+TGG | + | tig0023317:70083-70102 | Msa1407640:intron | 50.0% | |
| CAATGGATCCAACCCTTCCA+TGG | - | tig0023317:70094-70113 | None:intergenic | 50.0% | |
| CTGCATGACTAGAAGGTCAC+AGG | - | tig0023317:70175-70194 | None:intergenic | 50.0% | |
| GTGACCTTCTAGTCATGCAG+TGG | + | tig0023317:70175-70194 | Msa1407640:intron | 50.0% | |
| !! | TCCCTGAATCCATAGTGGAC+AGG | - | tig0023317:70783-70802 | None:intergenic | 50.0% |
| TTCAGGGAAGCAATTGGTGC+GGG | + | tig0023317:70795-70814 | Msa1407640:intron | 50.0% | |
| ! | GGTGCTGTGTTCGGTTATGA+GGG | + | tig0023317:71095-71114 | Msa1407640:intron | 50.0% |
| !! | GAGGGTAGTTGATGGTAGGA+AGG | + | tig0023317:71113-71132 | Msa1407640:intron | 50.0% |
| !! | GGTAGTTGATGGTAGGAAGG+TGG | + | tig0023317:71116-71135 | Msa1407640:intron | 50.0% |
| GTCAGCTGGTTGTGTTCTTG+TGG | + | tig0023317:71139-71158 | Msa1407640:intron | 50.0% | |
| GGGGTTTAGGCAGTTCTTTG+TGG | + | tig0023317:71186-71205 | Msa1407640:intron | 50.0% | |
| ! | GTTTTGCTGCATGGGTAGTG+AGG | + | tig0023317:71236-71255 | Msa1407640:intron | 50.0% |
| ! | TGTTCGAGCCGATTCCTTTG+TGG | + | tig0023317:71353-71372 | Msa1407640:intron | 50.0% |
| GGTGCACTAATAAGCTCAGG+TGG | - | tig0023317:71407-71426 | None:intergenic | 50.0% | |
| CGAGGTGCACTAATAAGCTC+AGG | - | tig0023317:71410-71429 | None:intergenic | 50.0% | |
| GCTTATTAGTGCACCTCGCA+CGG | + | tig0023317:71412-71431 | Msa1407640:intron | 50.0% | |
| CTTATTAGTGCACCTCGCAC+GGG | + | tig0023317:71413-71432 | Msa1407640:intron | 50.0% | |
| GCTATCTCCAGTAGTCAAGC+AGG | - | tig0023317:71648-71667 | None:intergenic | 50.0% | |
| CATTGAGACCGACTGTGAAG+TGG | + | tig0023317:71742-71761 | Msa1407640:CDS | 50.0% | |
| GGCAAACCATTACCAGCTTC+TGG | - | tig0023317:71836-71855 | None:intergenic | 50.0% | |
| CCAGAGTCCAACTCTGGTAA+AGG | - | tig0023317:72291-72310 | None:intergenic | 50.0% | |
| CCTTTACCAGAGTTGGACTC+TGG | + | tig0023317:72288-72307 | Msa1407640:intron | 50.0% | |
| AAAGGACCAGAGTCCAACTC+TGG | - | tig0023317:72297-72316 | None:intergenic | 50.0% | |
| CGTCTCCCAGATCCAGTAAA+TGG | - | tig0023317:72636-72655 | None:intergenic | 50.0% | |
| CCTCCACCAGTTTCTTCTTC+CGG | + | tig0023317:72684-72703 | Msa1407640:CDS | 50.0% | |
| CTCCACCAGTTTCTTCTTCC+GGG | + | tig0023317:72685-72704 | Msa1407640:CDS | 50.0% | |
| TTGGACCCGGAAGAAGAAAC+TGG | - | tig0023317:72693-72712 | None:intergenic | 50.0% | |
| AGTTTCTTCTTCCGGGTCCA+AGG | + | tig0023317:72692-72711 | Msa1407640:CDS | 50.0% | |
| AGGATTCTTGTCCTTGGACC+CGG | - | tig0023317:72706-72725 | None:intergenic | 50.0% | |
| AGCAGCAGGATTCTTGTCCT+TGG | - | tig0023317:72712-72731 | None:intergenic | 50.0% | |
| ACAAGCTTGCCCTGAGTTTG+AGG | - | tig0023317:72786-72805 | None:intergenic | 50.0% | |
| ACTCAGGGCAAGCTTGTGTT+TGG | + | tig0023317:72789-72808 | Msa1407640:CDS | 50.0% | |
| CTCAGGGCAAGCTTGTGTTT+GGG | + | tig0023317:72790-72809 | Msa1407640:CDS | 50.0% | |
| TCTCTCTTTGTAGGCAACCG+AGG | + | tig0023317:72949-72968 | Msa1407640:intron | 50.0% | |
| ! | TTACTTCGTTGGCCTGTGCA+TGG | + | tig0023317:73099-73118 | Msa1407640:three_prime_UTR | 50.0% |
| !! | CACTTTCAAGTTGGGGCTGC+AGG | - | tig0023317:69058-69077 | None:intergenic | 55.0% |
| CTGCAGCCCCAACTTGAAAG+TGG | + | tig0023317:69056-69075 | Msa1407640:intron | 55.0% | |
| AGACGATCAAGGGCTGATGG+AGG | - | tig0023317:69184-69203 | None:intergenic | 55.0% | |
| CCTAGACGATCAAGGGCTGA+TGG | - | tig0023317:69187-69206 | None:intergenic | 55.0% | |
| CCATCAGCCCTTGATCGTCT+AGG | + | tig0023317:69184-69203 | Msa1407640:CDS | 55.0% | |
| TCGTAATGCTGCTGCTGAGC+GGG | + | tig0023317:69347-69366 | Msa1407640:CDS | 55.0% | |
| ! | GCTGAGCGGGTTTCTCATTG+TGG | + | tig0023317:69360-69379 | Msa1407640:CDS | 55.0% |
| AATGGGGAGCCTTGGCACAA+TGG | - | tig0023317:70210-70229 | None:intergenic | 55.0% | |
| TCAGGGAAGCAATTGGTGCG+GGG | + | tig0023317:70796-70815 | Msa1407640:intron | 55.0% | |
| ! | GCGGGGGTAGTTCTTTTGTG+AGG | + | tig0023317:70813-70832 | Msa1407640:intron | 55.0% |
| GTGAGGCTGCCTGTTTGTGT+TGG | + | tig0023317:70830-70849 | Msa1407640:intron | 55.0% | |
| AGGCTGCCTGTTTGTGTTGG+TGG | + | tig0023317:70833-70852 | Msa1407640:intron | 55.0% | |
| !! | TGCCTGTTTGTGTTGGTGGC+TGG | + | tig0023317:70837-70856 | Msa1407640:intron | 55.0% |
| CACCAGCCACCAACACAAAC+AGG | - | tig0023317:70842-70861 | None:intergenic | 55.0% | |
| ATCCCTAAGAGCCGCAAGCA+CGG | - | tig0023317:70974-70993 | None:intergenic | 55.0% | |
| GATGCTGTTGTGCGACACAC+TGG | + | tig0023317:70991-71010 | Msa1407640:intron | 55.0% | |
| ATCCCTAAGAGCCGCAAGCA+CGG | - | tig0023317:70974-70993 | None:intergenic | 55.0% | |
| GATGCTGTTGTGCGACACAC+TGG | + | tig0023317:70991-71010 | Msa1407640:intron | 55.0% | |
| !! | CTGTTGCAGGGTGCTGTGTT+CGG | + | tig0023317:71086-71105 | Msa1407640:intron | 55.0% |
| ! | GGGTGCTGTGTTCGGTTATG+AGG | + | tig0023317:71094-71113 | Msa1407640:intron | 55.0% |
| GGGGAAATCGGTTGCCACAA+AGG | - | tig0023317:71370-71389 | None:intergenic | 55.0% | |
| GGCGAAGTCCACTTCACAGT+CGG | - | tig0023317:71753-71772 | None:intergenic | 55.0% | |
| AAGGCCCCAGAAGCTGGTAA+TGG | + | tig0023317:71827-71846 | Msa1407640:intron | 55.0% | |
| TACTGGATCTGGGAGACGCT+TGG | + | tig0023317:72638-72657 | Msa1407640:CDS | 55.0% | |
| CCGGAAGAAGAAACTGGTGG+AGG | - | tig0023317:72687-72706 | None:intergenic | 55.0% | |
| GACCCGGAAGAAGAAACTGG+TGG | - | tig0023317:72690-72709 | None:intergenic | 55.0% | |
| CCTTTCCGGTCTCTTTACCG+CGG | - | tig0023317:72827-72846 | None:intergenic | 55.0% | |
| CAGGGAAGCAATTGGTGCGG+GGG | + | tig0023317:70797-70816 | Msa1407640:intron | 60.0% | |
| !! | TGTTGGTGGCTGGTGTGTGC+TGG | + | tig0023317:70847-70866 | Msa1407640:intron | 60.0% |
| ! | AGCACAGAAGGACGGACTCC+AGG | - | tig0023317:70915-70934 | None:intergenic | 60.0% |
| !! | GCTTTGTGCTTTTGGGGGCG+TGG | + | tig0023317:70932-70951 | Msa1407640:intron | 60.0% |
| ! | ACACACTGGCTGCCTGTTGC+AGG | + | tig0023317:71005-71024 | Msa1407640:intron | 60.0% |
| ! | CACACTGGCTGCCTGTTGCA+GGG | + | tig0023317:71006-71025 | Msa1407640:intron | 60.0% |
| ! | ACACACTGGCTGCCTGTTGC+AGG | + | tig0023317:71005-71024 | Msa1407640:intron | 60.0% |
| ! | CACACTGGCTGCCTGTTGCA+GGG | + | tig0023317:71006-71025 | Msa1407640:intron | 60.0% |
| CGAACACAGCACCCTGCAAC+AGG | - | tig0023317:71088-71107 | None:intergenic | 60.0% | |
| TGGTAGGAAGGTGGGTCAGC+TGG | + | tig0023317:71125-71144 | Msa1407640:intron | 60.0% | |
| CTGCATGGGTAGTGAGGCTG+TGG | + | tig0023317:71242-71261 | Msa1407640:intron | 60.0% | |
| TTAACCAACGAGCCCGTGCG+AGG | - | tig0023317:71428-71447 | None:intergenic | 60.0% | |
| CGCCCCGCCCTTAGATTACA+AGG | + | tig0023317:71769-71788 | Msa1407640:CDS | 60.0% | |
| TCCGGCAGAACGTGGAGCAA+CGG | - | tig0023317:71807-71826 | None:intergenic | 60.0% | |
| TGCTCCACGTTCTGCCGGAA+AGG | + | tig0023317:71808-71827 | Msa1407640:CDS | 60.0% | |
| !! | ACCAGCTTCTGGGGCCTTTC+CGG | - | tig0023317:71825-71844 | None:intergenic | 60.0% |
| GGATCTGGGAGACGCTTGGA+CGG | + | tig0023317:72642-72661 | Msa1407640:CDS | 60.0% | |
| CCGCGGTAAAGAGACCGGAA+AGG | + | tig0023317:72824-72843 | Msa1407640:CDS | 60.0% | |
| !! | GTGGCTGGTGTGTGCTGGCT+GGG | + | tig0023317:70852-70871 | Msa1407640:intron | 65.0% |
| GGCGTGGTTCAGCAGTGTGG+TGG | + | tig0023317:70948-70967 | Msa1407640:intron | 65.0% | |
| CAGTGTGGTGGCCGTGCTTG+CGG | + | tig0023317:70960-70979 | Msa1407640:intron | 65.0% | |
| TGGCCGTGCTTGCGGCTCTT+AGG | + | tig0023317:70968-70987 | Msa1407640:intron | 65.0% | |
| GGCCGTGCTTGCGGCTCTTA+GGG | + | tig0023317:70969-70988 | Msa1407640:intron | 65.0% | |
| !! | GCCTGTTGCAGGGTGCTGTG+TGG | + | tig0023317:71016-71035 | Msa1407640:intron | 65.0% |
| GCCACACAGCACCCTGCAAC+AGG | - | tig0023317:71020-71039 | None:intergenic | 65.0% | |
| GTGCTGTGTGGCCGTGCTTG+CGG | + | tig0023317:71028-71047 | Msa1407640:intron | 65.0% | |
| TGGCCGTGCTTGCGGCTCTT+AGG | + | tig0023317:70968-70987 | Msa1407640:intron | 65.0% | |
| GGCCGTGCTTGCGGCTCTTA+GGG | + | tig0023317:70969-70988 | Msa1407640:intron | 65.0% | |
| CGTGGAGCAACGGGCCTTTC+AGG | - | tig0023317:71797-71816 | None:intergenic | 65.0% | |
| CCGGCAGAACGTGGAGCAAC+GGG | - | tig0023317:71806-71825 | None:intergenic | 65.0% | |
| CCCGTTGCTCCACGTTCTGC+CGG | + | tig0023317:71803-71822 | Msa1407640:CDS | 65.0% | |
| ! | GGTGGCTGGTGTGTGCTGGC+TGG | + | tig0023317:70851-70870 | Msa1407640:intron | 70.0% |
| !! | GCTGGTGTGTGCTGGCTGGG+CGG | + | tig0023317:70855-70874 | Msa1407640:intron | 70.0% |
| ! | GGGGGCGTGGTTCAGCAGTG+TGG | + | tig0023317:70945-70964 | Msa1407640:intron | 70.0% |
| TGCACCTCGCACGGGCTCGT+TGG | + | tig0023317:71421-71440 | Msa1407640:intron | 70.0% | |
| GGGGCCTTTCCGGCAGAACG+TGG | - | tig0023317:71815-71834 | None:intergenic | 70.0% | |
| GCCGGAAAGGCCCCAGAAGC+TGG | + | tig0023317:71821-71840 | Msa1407640:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023317 | gene | 67820 | 73322 | 67820 | ID=Msa1407640;Name=Msa1407640 |
| tig0023317 | mRNA | 67820 | 73322 | 67820 | ID=Msa1407640-mRNA-1;Parent=Msa1407640;Name=Msa1407640-mRNA-1;_AED=0.01;_eAED=0.01;_QI=130|1|1|1|0.88|0.8|10|265|320 |
| tig0023317 | exon | 67820 | 67899 | 67820 | ID=Msa1407640-mRNA-1:exon:25143;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 68154 | 68206 | 68154 | ID=Msa1407640-mRNA-1:exon:25144;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 68698 | 68775 | 68698 | ID=Msa1407640-mRNA-1:exon:25145;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 69062 | 69086 | 69062 | ID=Msa1407640-mRNA-1:exon:25146;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 69173 | 69205 | 69173 | ID=Msa1407640-mRNA-1:exon:25147;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 69310 | 69431 | 69310 | ID=Msa1407640-mRNA-1:exon:25148;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 69545 | 69675 | 69545 | ID=Msa1407640-mRNA-1:exon:25149;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 71619 | 71842 | 71619 | ID=Msa1407640-mRNA-1:exon:25150;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 72595 | 72845 | 72595 | ID=Msa1407640-mRNA-1:exon:25151;Parent=Msa1407640-mRNA-1 |
| tig0023317 | exon | 72962 | 73322 | 72962 | ID=Msa1407640-mRNA-1:exon:25152;Parent=Msa1407640-mRNA-1 |
| tig0023317 | five_prime_UTR | 67820 | 67899 | 67820 | ID=Msa1407640-mRNA-1:five_prime_utr;Parent=Msa1407640-mRNA-1 |
| tig0023317 | five_prime_UTR | 68154 | 68203 | 68154 | ID=Msa1407640-mRNA-1:five_prime_utr;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 68204 | 68206 | 68204 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 68698 | 68775 | 68698 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 69062 | 69086 | 69062 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 69173 | 69205 | 69173 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 69310 | 69431 | 69310 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 69545 | 69675 | 69545 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 71619 | 71842 | 71619 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 72595 | 72845 | 72595 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | CDS | 72962 | 73057 | 72962 | ID=Msa1407640-mRNA-1:cds;Parent=Msa1407640-mRNA-1 |
| tig0023317 | three_prime_UTR | 73058 | 73322 | 73058 | ID=Msa1407640-mRNA-1:three_prime_utr;Parent=Msa1407640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
