Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930830 | XP_003630940.1 | 100.000 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930830 | sp|Q9ES53|UFD1_RAT | 53.478 | 230 | 101 | 3 | 13 | 238 | 19 | 246 | 9.91e-82 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0930830 | 0.814639 | 1.390355e-51 | -8.615850e-47 |
| Msa0017510 | Msa0930830 | -0.819096 | 1.389320e-52 | -8.615850e-47 |
| Msa0091210 | Msa0930830 | 0.806613 | 7.555754e-50 | -8.615850e-47 |
| Msa0101810 | Msa0930830 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
| Msa0637710 | Msa0930830 | -0.832594 | 8.646910e-56 | -8.615850e-47 |
| Msa0638260 | Msa0930830 | -0.801153 | 1.029776e-48 | -8.615850e-47 |
| Msa0710060 | Msa0930830 | -0.802220 | 6.221838e-49 | -8.615850e-47 |
| Msa0710070 | Msa0930830 | -0.816070 | 6.682954e-52 | -8.615850e-47 |
| Msa0731940 | Msa0930830 | -0.805570 | 1.252223e-49 | -8.615850e-47 |
| Msa0757450 | Msa0930830 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
| Msa0757500 | Msa0930830 | 0.826393 | 2.781070e-54 | -8.615850e-47 |
| Msa0157290 | Msa0930830 | -0.818764 | 1.652886e-52 | -8.615850e-47 |
| Msa0215320 | Msa0930830 | 0.874144 | 8.496996e-68 | -8.615850e-47 |
| Msa0223410 | Msa0930830 | 0.803073 | 4.149318e-49 | -8.615850e-47 |
| Msa0224780 | Msa0930830 | -0.803095 | 4.104567e-49 | -8.615850e-47 |
| Msa0381610 | Msa0930830 | 0.800094 | 1.693338e-48 | -8.615850e-47 |
| Msa0388960 | Msa0930830 | -0.803044 | 4.206945e-49 | -8.615850e-47 |
| Msa0392180 | Msa0930830 | -0.824340 | 8.511169e-54 | -8.615850e-47 |
| Msa0395790 | Msa0930830 | -0.809813 | 1.571525e-50 | -8.615850e-47 |
| Msa0396060 | Msa0930830 | -0.810548 | 1.091472e-50 | -8.615850e-47 |
| Msa0412970 | Msa0930830 | -0.815770 | 7.796607e-52 | -8.615850e-47 |
| Msa0443260 | Msa0930830 | -0.819096 | 1.389679e-52 | -8.615850e-47 |
| Msa0480980 | Msa0930830 | -0.805205 | 1.493542e-49 | -8.615850e-47 |
| Msa0294560 | Msa0930830 | 0.810118 | 1.351221e-50 | -8.615850e-47 |
| Msa0302580 | Msa0930830 | 0.864817 | 9.250868e-65 | -8.615850e-47 |
| Msa0340450 | Msa0930830 | -0.815711 | 8.038031e-52 | -8.615850e-47 |
| Msa0354800 | Msa0930830 | 0.809744 | 1.626459e-50 | -8.615850e-47 |
| Msa0574760 | Msa0930830 | 0.809798 | 1.583422e-50 | -8.615850e-47 |
| Msa0575270 | Msa0930830 | -0.817969 | 2.502718e-52 | -8.615850e-47 |
| Msa0581760 | Msa0930830 | -0.823965 | 1.042543e-53 | -8.615850e-47 |
| Msa0843260 | Msa0930830 | -0.808022 | 3.799036e-50 | -8.615850e-47 |
| Msa0849100 | Msa0930830 | -0.807751 | 4.336491e-50 | -8.615850e-47 |
| Msa0870530 | Msa0930830 | -0.807947 | 3.941019e-50 | -8.615850e-47 |
| Msa0880140 | Msa0930830 | -0.816817 | 4.546688e-52 | -8.615850e-47 |
| Msa0897330 | Msa0930830 | -0.807097 | 5.968862e-50 | -8.615850e-47 |
| Msa0930830 | Msa0965600 | -0.804759 | 1.851841e-49 | -8.615850e-47 |
| Msa0930830 | Msa0970630 | 0.808976 | 2.377148e-50 | -8.615850e-47 |
| Msa0930830 | Msa0994030 | -0.825606 | 4.278087e-54 | -8.615850e-47 |
| Msa0930830 | Msa1000180 | -0.817594 | 3.041064e-52 | -8.615850e-47 |
| Msa0930830 | Msa1000300 | -0.806601 | 7.598396e-50 | -8.615850e-47 |
| Msa0930830 | Msa1014540 | -0.802981 | 4.334098e-49 | -8.615850e-47 |
| Msa0930830 | Msa1075220 | 0.834128 | 3.584347e-56 | -8.615850e-47 |
| Msa0930830 | Msa1094200 | -0.819139 | 1.358855e-52 | -8.615850e-47 |
| Msa0930830 | Msa1102300 | 0.811147 | 8.096793e-51 | -8.615850e-47 |
| Msa0930830 | Msa1113170 | -0.819357 | 1.211593e-52 | -8.615850e-47 |
| Msa0930830 | Msa1116130 | 0.806986 | 6.302278e-50 | -8.615850e-47 |
| Msa0930830 | Msa1121450 | 0.839209 | 1.817007e-57 | -8.615850e-47 |
| Msa0930830 | Msa1130270 | 0.820374 | 7.095856e-53 | -8.615850e-47 |
| Msa0930830 | Msa1139000 | 0.818661 | 1.744811e-52 | -8.615850e-47 |
| Msa0930830 | Msa1150700 | 0.825302 | 5.048117e-54 | -8.615850e-47 |
| Msa0930830 | Msa1162550 | 0.839966 | 1.154936e-57 | -8.615850e-47 |
| Msa0930830 | Msa1182620 | 0.835039 | 2.116172e-56 | -8.615850e-47 |
| Msa0930830 | Msa1193340 | -0.808272 | 3.360741e-50 | -8.615850e-47 |
| Msa0930830 | Msa1222970 | -0.816520 | 5.301957e-52 | -8.615850e-47 |
| Msa0930830 | Msa1237820 | -0.836566 | 8.681427e-57 | -8.615850e-47 |
| Msa0930830 | Msa1238930 | -0.818780 | 1.639823e-52 | -8.615850e-47 |
| Msa0930830 | Msa1283860 | -0.810594 | 1.066399e-50 | -8.615850e-47 |
| Msa0930830 | Msa1335860 | -0.816157 | 6.390788e-52 | -8.615850e-47 |
| Msa0930830 | Msa1364470 | 0.827297 | 1.691095e-54 | -8.615850e-47 |
| Msa0930830 | Msa1367080 | -0.815131 | 1.081800e-51 | -8.615850e-47 |
| Msa0930830 | Msa1407640 | 0.994530 | 5.165572e-208 | -8.615850e-47 |
| Msa0930830 | Msa1413270 | 0.815496 | 8.974531e-52 | -8.615850e-47 |
| Msa0930830 | Msa1423880 | -0.818230 | 2.184538e-52 | -8.615850e-47 |
| Msa0930830 | Msa1425680 | 0.814053 | 1.874309e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930830 | MtrunA17_Chr8g0391701 | 100.000 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 0.0 | 663 |
| Msa0930830 | MtrunA17_Chr4g0031781 | 56.180 | 267 | 103 | 3 | 55 | 319 | 1 | 255 | 1.58e-100 | 296 |
| Msa0930830 | MtrunA17_Chr4g0031801 | 53.558 | 267 | 110 | 3 | 55 | 319 | 1 | 255 | 1.08e-95 | 283 |
| Msa0930830 | MtrunA17_Chr4g0031811 | 54.307 | 267 | 108 | 2 | 55 | 319 | 1 | 255 | 3.29e-95 | 282 |
| Msa0930830 | MtrunA17_Chr5g0439731 | 38.122 | 181 | 85 | 4 | 32 | 189 | 90 | 266 | 1.17e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930830 | AT2G21270.5 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa0930830 | AT2G21270.2 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa0930830 | AT2G21270.4 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa0930830 | AT2G21270.1 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 6.22e-175 | 487 |
| Msa0930830 | AT2G21270.3 | 76.780 | 323 | 68 | 5 | 1 | 320 | 22 | 340 | 1.88e-174 | 487 |
| Msa0930830 | AT4G38930.2 | 70.093 | 321 | 89 | 2 | 1 | 320 | 1 | 315 | 4.86e-165 | 462 |
| Msa0930830 | AT4G38930.3 | 70.093 | 321 | 89 | 2 | 1 | 320 | 1 | 315 | 4.86e-165 | 462 |
| Msa0930830 | AT4G38930.4 | 71.028 | 321 | 82 | 4 | 1 | 320 | 1 | 311 | 7.44e-165 | 461 |
| Msa0930830 | AT4G38930.1 | 71.028 | 321 | 82 | 4 | 1 | 320 | 1 | 311 | 7.44e-165 | 461 |
| Msa0930830 | AT2G29070.2 | 60.635 | 315 | 113 | 5 | 10 | 320 | 5 | 312 | 1.17e-135 | 387 |
| Msa0930830 | AT2G29070.1 | 59.582 | 287 | 105 | 5 | 38 | 320 | 1 | 280 | 2.07e-118 | 342 |
| Msa0930830 | AT2G29070.3 | 51.813 | 193 | 82 | 5 | 132 | 320 | 11 | 196 | 2.77e-53 | 173 |
| Msa0930830 | AT4G15420.1 | 40.123 | 162 | 88 | 4 | 32 | 184 | 90 | 251 | 5.52e-27 | 111 |
| Msa0930830 | AT4G15420.2 | 40.123 | 162 | 88 | 4 | 32 | 184 | 213 | 374 | 6.24e-27 | 111 |
Find 111 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTTCTTCTTTCTCTT+TGG | 0.145615 | 6_2:+79930620 | None:intergenic |
| CACAAAGTAATAATAATTTA+AGG | 0.192642 | 6_2:+79930398 | None:intergenic |
| GATATTTGCTGCAAATTAAA+AGG | 0.193829 | 6_2:+79930320 | None:intergenic |
| CTCCACCAGTTTCTTCTTCC+GGG | 0.205032 | 6_2:-79930928 | Msa0930830:CDS |
| GATGCAACCCTTTACTTTAA+AGG | 0.205872 | 6_2:-79930344 | Msa0930830:three_prime_UTR |
| CGTGGAGCAACGGGCCTTTC+AGG | 0.207292 | 6_2:+79931817 | None:intergenic |
| AAGAAGTGGTATTACCTTTC+CGG | 0.212674 | 6_2:+79930775 | None:intergenic |
| CCGGGAAGAAGTATTCTTTA+AGG | 0.227291 | 6_2:-79930584 | Msa0930830:CDS |
| CGTCTCCCAGATCCAGTAAA+TGG | 0.228162 | 6_2:+79930980 | None:intergenic |
| CCTCCACCAGTTTCTTCTTC+CGG | 0.229434 | 6_2:-79930929 | Msa0930830:CDS |
| CCAAAGTTCAACCCATTTAC+TGG | 0.248848 | 6_2:-79930992 | Msa0930830:CDS |
| TTATCTTCTTCTTTCTCTTT+GGG | 0.250840 | 6_2:+79930621 | None:intergenic |
| GGCAAACCATTACCAGCTTC+TGG | 0.251775 | 6_2:+79931778 | None:intergenic |
| ACCAGCTTCTGGGGCCTTTC+CGG | 0.257803 | 6_2:+79931789 | None:intergenic |
| TTCAGGTTCCTTGTAATCTA+AGG | 0.276898 | 6_2:+79931834 | None:intergenic |
| GCCTCACACAAAAGACTTCT+TGG | 0.277768 | 6_2:-79933980 | Msa0930830:CDS |
| TTCAACCCATTTACTGGATC+TGG | 0.281619 | 6_2:-79930986 | Msa0930830:CDS |
| TTCTCAGATCAACCATTATC+AGG | 0.286140 | 6_2:-79935733 | Msa0930830:intron |
| GGTTTCTCATTGTGGTGTTC+TGG | 0.292912 | 6_2:-79934243 | Msa0930830:CDS |
| CCGGTCTCTTTACCGCGGTT+TGG | 0.328464 | 6_2:+79930794 | None:intergenic |
| ATGCAACCCTTTACTTTAAA+GGG | 0.338587 | 6_2:-79930343 | Msa0930830:three_prime_UTR |
| ACTCAGGGCAAGCTTGTGTT+TGG | 0.343149 | 6_2:-79930824 | Msa0930830:CDS |
| GCATGATATACATGCCATAC+TGG | 0.346272 | 6_2:-79934202 | Msa0930830:CDS |
| TTTGTCACCACTTTCAAGTT+GGG | 0.347179 | 6_2:+79934548 | None:intergenic |
| TCAATCATCACAATACAAAA+TGG | 0.360357 | 6_2:-79935426 | Msa0930830:intron |
| CGGGAAGAAGTATTCTTTAA+GGG | 0.362589 | 6_2:-79930583 | Msa0930830:CDS |
| AAAAGGCCCTTTAAAGTAAA+GGG | 0.371200 | 6_2:+79930337 | None:intergenic |
| ACAAGCTTGCCCTGAGTTTG+AGG | 0.372265 | 6_2:+79930830 | None:intergenic |
| AACTTTGGTTCAGTTTCAGC+AGG | 0.376076 | 6_2:+79931007 | None:intergenic |
| AGCAGCAGGATTCTTGTCCT+TGG | 0.380093 | 6_2:+79930904 | None:intergenic |
| AACTTAACATATGTTCCCTT+TGG | 0.397023 | 6_2:+79934006 | None:intergenic |
| CCTTAAAGAATACTTCTTCC+CGG | 0.399493 | 6_2:+79930584 | None:intergenic |
| TAAAAGGCCCTTTAAAGTAA+AGG | 0.401473 | 6_2:+79930336 | None:intergenic |
| GCAAACCATTACCAGCTTCT+GGG | 0.410537 | 6_2:+79931779 | None:intergenic |
| CCGGCAGAACGTGGAGCAAC+GGG | 0.425151 | 6_2:+79931808 | None:intergenic |
| GACTACTGGAGATAGCATTA+TGG | 0.427680 | 6_2:-79931959 | Msa0930830:CDS |
| CCAGTAAATGGGTTGAACTT+TGG | 0.434917 | 6_2:+79930992 | None:intergenic |
| CGCCCCGCCCTTAGATTACA+AGG | 0.435875 | 6_2:-79931842 | Msa0930830:CDS |
| AATGAACGCGTATTCTTCTC+TGG | 0.440175 | 6_2:-79930375 | Msa0930830:three_prime_UTR |
| CTTGGATATTTCCAATCCTA+AGG | 0.447761 | 6_2:-79933962 | Msa0930830:CDS |
| CTCAGGGCAAGCTTGTGTTT+GGG | 0.462423 | 6_2:-79930823 | Msa0930830:CDS |
| GACTCACATGGCCTTAGGAT+TGG | 0.462854 | 6_2:+79933951 | None:intergenic |
| AAGTAATGCTCCTCAAACTC+AGG | 0.463360 | 6_2:-79930840 | Msa0930830:CDS |
| TCGTAATGCTGCTGCTGAGC+GGG | 0.469762 | 6_2:-79934264 | Msa0930830:CDS |
| GATAAGTTTCAGCCTTTCAC+CGG | 0.469983 | 6_2:-79930603 | Msa0930830:CDS |
| GCCGGAAAGGCCCCAGAAGC+TGG | 0.470690 | 6_2:-79931790 | Msa0930830:intron |
| ACATCGACTCACATGGCCTT+AGG | 0.479482 | 6_2:+79933946 | None:intergenic |
| CTCAATGATGCTTATAGCAT+TGG | 0.484222 | 6_2:+79931885 | None:intergenic |
| GTTCCTTGTAATCTAAGGGC+GGG | 0.489115 | 6_2:+79931839 | None:intergenic |
| AGGATTCTTGTCCTTGGACC+CGG | 0.493138 | 6_2:+79930910 | None:intergenic |
| GTCTCCCAGATCCAGTAAAT+GGG | 0.494698 | 6_2:+79930981 | None:intergenic |
| TACTGGATCTGGGAGACGCT+TGG | 0.495783 | 6_2:-79930975 | Msa0930830:CDS |
| TTGTCACCACTTTCAAGTTG+GGG | 0.497338 | 6_2:+79934549 | None:intergenic |
| TCTTCTTCTTTCTCTTTGGG+TGG | 0.497605 | 6_2:+79930624 | None:intergenic |
| TCAGGTTCCTTGTAATCTAA+GGG | 0.497668 | 6_2:+79931835 | None:intergenic |
| AGCTTGAAGACTTGACACTT+TGG | 0.500655 | 6_2:-79935453 | Msa0930830:five_prime_UTR |
| TGCTCCACGTTCTGCCGGAA+AGG | 0.501088 | 6_2:-79931803 | Msa0930830:CDS |
| CCCGTTGCTCCACGTTCTGC+CGG | 0.501489 | 6_2:-79931808 | Msa0930830:CDS |
| TTGGACCCGGAAGAAGAAAC+TGG | 0.507831 | 6_2:+79930923 | None:intergenic |
| ATAACTAACCTAGACGATCA+AGG | 0.507878 | 6_2:+79934419 | None:intergenic |
| TTCGATGGATATGGATATCA+CGG | 0.509344 | 6_2:-79934910 | Msa0930830:CDS |
| TTACTTCGTTGGCCTGTGCA+TGG | 0.513408 | 6_2:-79930514 | Msa0930830:three_prime_UTR |
| GAATACTTCTTCCCGGTGAA+AGG | 0.517126 | 6_2:+79930591 | None:intergenic |
| TCCGGCAGAACGTGGAGCAA+CGG | 0.519164 | 6_2:+79931807 | None:intergenic |
| CCTAGACGATCAAGGGCTGA+TGG | 0.520566 | 6_2:+79934427 | None:intergenic |
| TCAACCCATTTACTGGATCT+GGG | 0.520842 | 6_2:-79930985 | Msa0930830:CDS |
| GTATTCTTCTCTGGAGCAAA+GGG | 0.521960 | 6_2:-79930366 | Msa0930830:three_prime_UTR |
| CTGGAGTTCATTGCTGAGGA+AGG | 0.523879 | 6_2:-79934224 | Msa0930830:CDS |
| AGTTTCTTCTTCCGGGTCCA+AGG | 0.526442 | 6_2:-79930921 | Msa0930830:CDS |
| TTTATTACAAGTTACTTCGT+TGG | 0.528532 | 6_2:-79930525 | Msa0930830:three_prime_UTR |
| CCATCAGCCCTTGATCGTCT+AGG | 0.532282 | 6_2:-79934427 | Msa0930830:intron |
| GCTATCTCCAGTAGTCAAGC+AGG | 0.533210 | 6_2:+79931966 | None:intergenic |
| ATGATGCTTATAGCATTGGC+AGG | 0.543569 | 6_2:+79931889 | None:intergenic |
| CTGCAGCCCCAACTTGAAAG+TGG | 0.545884 | 6_2:-79934555 | Msa0930830:intron |
| CGTATTCTTCTCTGGAGCAA+AGG | 0.547450 | 6_2:-79930367 | Msa0930830:three_prime_UTR |
| CATGATATACATGCCATACT+GGG | 0.549712 | 6_2:-79934201 | Msa0930830:intron |
| GGGGCCTTTCCGGCAGAACG+TGG | 0.552419 | 6_2:+79931799 | None:intergenic |
| GCTGAGCGGGTTTCTCATTG+TGG | 0.560946 | 6_2:-79934251 | Msa0930830:CDS |
| TTCCTTGTAATCTAAGGGCG+GGG | 0.562049 | 6_2:+79931840 | None:intergenic |
| CCAAACCGCGGTAAAGAGAC+CGG | 0.562944 | 6_2:-79930794 | Msa0930830:CDS |
| TCGATGGATATGGATATCAC+GGG | 0.569332 | 6_2:-79934909 | Msa0930830:CDS |
| CATTGAGACCGACTGTGAAG+TGG | 0.571055 | 6_2:-79931869 | Msa0930830:CDS |
| ACTTTGGTTCAGTTTCAGCA+GGG | 0.574254 | 6_2:+79931008 | None:intergenic |
| GGATCTGGGAGACGCTTGGA+CGG | 0.577239 | 6_2:-79930971 | Msa0930830:CDS |
| GGGAAGAAGTATTCTTTAAG+GGG | 0.578462 | 6_2:-79930582 | Msa0930830:CDS |
| CTTTGGTTCAGTTTCAGCAG+GGG | 0.579771 | 6_2:+79931009 | None:intergenic |
| ATAGACTTGGATCCATGCAC+AGG | 0.580648 | 6_2:+79930502 | None:intergenic |
| ATTATAAGCAAAAGACTGAC+CGG | 0.589350 | 6_2:-79930448 | Msa0930830:three_prime_UTR |
| TTCGTAATGCTGCTGCTGAG+CGG | 0.597157 | 6_2:-79934265 | Msa0930830:CDS |
| GGTTCCTTGTAATCTAAGGG+CGG | 0.597744 | 6_2:+79931838 | None:intergenic |
| TCTCTCTTTGTAGGCAACCG+AGG | 0.598775 | 6_2:-79930664 | Msa0930830:intron |
| GGCGAAGTCCACTTCACAGT+CGG | 0.599655 | 6_2:+79931861 | None:intergenic |
| TAACTAACCTAGACGATCAA+GGG | 0.601848 | 6_2:+79934420 | None:intergenic |
| ATAATGGTTGATCTGAGAAG+AGG | 0.605474 | 6_2:+79935737 | None:intergenic |
| CAAACCATTACCAGCTTCTG+GGG | 0.606173 | 6_2:+79931780 | None:intergenic |
| GGTGGAGGCTGATAATTCAA+AGG | 0.609376 | 6_2:+79930944 | None:intergenic |
| ATAAGTTTCAGCCTTTCACC+GGG | 0.612687 | 6_2:-79930602 | Msa0930830:CDS |
| ACTTTGTGAACTAGAAGCTG+TGG | 0.614635 | 6_2:+79930859 | None:intergenic |
| CCGGAAGAAGAAACTGGTGG+AGG | 0.618481 | 6_2:+79930929 | None:intergenic |
| TGTTCTGGAGTTCATTGCTG+AGG | 0.630474 | 6_2:-79934228 | Msa0930830:CDS |
| TAGATTACAAGGAACCTGAA+AGG | 0.641772 | 6_2:-79931831 | Msa0930830:CDS |
| GACCCGGAAGAAGAAACTGG+TGG | 0.649986 | 6_2:+79930926 | None:intergenic |
| TACTGGAGATAGCATTATGG+TGG | 0.650470 | 6_2:-79931956 | Msa0930830:CDS |
| AGTAATGCTCCTCAAACTCA+GGG | 0.668072 | 6_2:-79930839 | Msa0930830:CDS |
| TGTGAACTAGAAGCTGTGGA+AGG | 0.673745 | 6_2:+79930863 | None:intergenic |
| GCAGCTTGGAAACTACATTG+AGG | 0.674859 | 6_2:-79931996 | Msa0930830:intron |
| AGACGATCAAGGGCTGATGG+AGG | 0.677129 | 6_2:+79934430 | None:intergenic |
| TTACGAAGTTCAAACAACAT+CGG | 0.689875 | 6_2:+79934281 | None:intergenic |
| CCGCGGTAAAGAGACCGGAA+AGG | 0.690679 | 6_2:-79930789 | Msa0930830:intron |
| CCTTTCCGGTCTCTTTACCG+CGG | 0.712916 | 6_2:+79930789 | None:intergenic |
| TTTGGGTCAAATCCAAACCG+CGG | 0.728144 | 6_2:-79930806 | Msa0930830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGTTTCTTAAATAATAA+TGG | + | chr6_2:79931492-79931511 | None:intergenic | 10.0% |
| !!! | TTGACTTTTTATTTTAATTA+AGG | - | chr6_2:79934623-79934642 | Msa0930830:intron | 10.0% |
| !! | TTAAAAAAAAAAAGCAATTG+AGG | + | chr6_2:79930487-79930506 | None:intergenic | 15.0% |
| !! | TATGTACATAATATTAGAAA+CGG | + | chr6_2:79931293-79931312 | None:intergenic | 15.0% |
| !! | AAAATATGAACAAATAAATG+GGG | + | chr6_2:79932719-79932738 | None:intergenic | 15.0% |
| !! | GAAAATATGAACAAATAAAT+GGG | + | chr6_2:79932720-79932739 | None:intergenic | 15.0% |
| !! | TGAAAATATGAACAAATAAA+TGG | + | chr6_2:79932721-79932740 | None:intergenic | 15.0% |
| !! | ATCAATAAATCACATTAAAT+TGG | - | chr6_2:79932831-79932850 | Msa0930830:intron | 15.0% |
| !! | TCAATAAATCACATTAAATT+GGG | - | chr6_2:79932832-79932851 | Msa0930830:intron | 15.0% |
| !! | ATATTGCATAAAACATATTA+AGG | + | chr6_2:79933189-79933208 | None:intergenic | 15.0% |
| !! | TGTAAGAACTATATTTAATA+TGG | - | chr6_2:79933216-79933235 | Msa0930830:intron | 15.0% |
| !! | CAACTAAAAATATAAAAAAG+TGG | + | chr6_2:79934606-79934625 | None:intergenic | 15.0% |
| !!! | AATAAATATTTTTGAGACTT+CGG | - | chr6_2:79934890-79934909 | Msa0930830:CDS | 15.0% |
| !! | CACAAAGTAATAATAATTTA+AGG | + | chr6_2:79935709-79935728 | None:intergenic | 15.0% |
| !! | AGTAAAAGATTGATAAGATT+TGG | + | chr6_2:79930408-79930427 | None:intergenic | 20.0% |
| !! | GGAAAAATTGAAGAATAATT+AGG | + | chr6_2:79930438-79930457 | None:intergenic | 20.0% |
| !!! | AATGCTTTTTCAATCTTTTA+GGG | - | chr6_2:79930458-79930477 | Msa0930830:three_prime_UTR | 20.0% |
| !! | TATGATTCCTATAAATGTTT+AGG | - | chr6_2:79930701-79930720 | Msa0930830:intron | 20.0% |
| !! | ATGATTCCTATAAATGTTTA+GGG | - | chr6_2:79930702-79930721 | Msa0930830:intron | 20.0% |
| !! | TTTGTACAAGTATTTGATAA+TGG | - | chr6_2:79930756-79930775 | Msa0930830:intron | 20.0% |
| !!! | TTGTACAAGTATTTGATAAT+GGG | - | chr6_2:79930757-79930776 | Msa0930830:intron | 20.0% |
| !!! | CATTACAAGTTTTTACATTT+AGG | + | chr6_2:79930857-79930876 | None:intergenic | 20.0% |
| !! | CTAAATGTAAAAACTTGTAA+TGG | - | chr6_2:79930855-79930874 | Msa0930830:CDS | 20.0% |
| !! | TAATGGAAACAAATAGTTTA+GGG | - | chr6_2:79930872-79930891 | Msa0930830:CDS | 20.0% |
| !!! | AGAGATTAATTGGATATTTT+TGG | + | chr6_2:79931424-79931443 | None:intergenic | 20.0% |
| !!! | ACGGCATTTTTTTTTTTTTT+TGG | + | chr6_2:79932544-79932563 | None:intergenic | 20.0% |
| !!! | ATCCATTGAGAATATATTTT+AGG | - | chr6_2:79932599-79932618 | Msa0930830:intron | 20.0% |
| !! | CAATAAATCACATTAAATTG+GGG | - | chr6_2:79932833-79932852 | Msa0930830:intron | 20.0% |
| !!! | GTTTCTTCTTATTTCTTTTA+TGG | - | chr6_2:79933977-79933996 | Msa0930830:CDS | 20.0% |
| !!! | TCTTATTTCTTTTATGGTTT+TGG | - | chr6_2:79933983-79934002 | Msa0930830:CDS | 20.0% |
| !! | GAATGTGAAAAATGTAATTA+TGG | - | chr6_2:79934916-79934935 | Msa0930830:CDS | 20.0% |
| !! | TAATTATGGAAAATATCATC+TGG | - | chr6_2:79934930-79934949 | Msa0930830:intron | 20.0% |
| !!! | GTATTTTTAAATCTCAGTAA+AGG | + | chr6_2:79934963-79934982 | None:intergenic | 20.0% |
| !! | ACTTAAATGTTAAAAAGAAG+TGG | + | chr6_2:79935346-79935365 | None:intergenic | 20.0% |
| !! | CTAAAAGATTGAAAAAGCAT+TGG | + | chr6_2:79930459-79930478 | None:intergenic | 25.0% |
| !!! | CAATGCTTTTTCAATCTTTT+AGG | - | chr6_2:79930457-79930476 | Msa0930830:three_prime_UTR | 25.0% |
| !! | AAGTGCTTGTTAATTAGTTT+AGG | - | chr6_2:79930533-79930552 | Msa0930830:three_prime_UTR | 25.0% |
| ! | TCAATCATCACAATACAAAA+TGG | - | chr6_2:79930678-79930697 | Msa0930830:intron | 25.0% |
| ! | TCAAAACCCTAAACATTTAT+AGG | + | chr6_2:79930711-79930730 | None:intergenic | 25.0% |
| ! | TTGTACATGAATTCGATAAT+AGG | - | chr6_2:79930810-79930829 | Msa0930830:CDS | 25.0% |
| !! | GTAATGGAAACAAATAGTTT+AGG | - | chr6_2:79930871-79930890 | Msa0930830:CDS | 25.0% |
| !! | TTGTACAAGTATTTGATAGT+AGG | - | chr6_2:79930924-79930943 | Msa0930830:CDS | 25.0% |
| !!! | CATCACAAGTTTTTACTTTT+AGG | + | chr6_2:79930981-79931000 | None:intergenic | 25.0% |
| ! | CTAAAAGTAAAAACTTGTGA+TGG | - | chr6_2:79930979-79930998 | Msa0930830:CDS | 25.0% |
| !! | TACATGTCGATTATTTATTG+AGG | - | chr6_2:79931343-79931362 | Msa0930830:intron | 25.0% |
| !! | ACATGTCGATTATTTATTGA+GGG | - | chr6_2:79931344-79931363 | Msa0930830:intron | 25.0% |
| ! | TTCAAAAAACTCAAAAAGCA+TGG | + | chr6_2:79931597-79931616 | None:intergenic | 25.0% |
| !! | TGTTCAGAAACAAAAACTTT+TGG | + | chr6_2:79931936-79931955 | None:intergenic | 25.0% |
| ! | TTAATTGAAATGCTCTTCAT+GGG | - | chr6_2:79932004-79932023 | Msa0930830:intron | 25.0% |
| !! | CACACTTAAGTTAGAATTTT+GGG | + | chr6_2:79932356-79932375 | None:intergenic | 25.0% |
| !! | ACACACTTAAGTTAGAATTT+TGG | + | chr6_2:79932357-79932376 | None:intergenic | 25.0% |
| ! | AAATTCTAACTTAAGTGTGT+AGG | - | chr6_2:79932357-79932376 | Msa0930830:intron | 25.0% |
| ! | ATTGTTAGGAATTGTTTAAC+CGG | - | chr6_2:79932426-79932445 | Msa0930830:intron | 25.0% |
| ! | AAAAAAAAAAAAATGCCGTC+CGG | - | chr6_2:79932545-79932564 | Msa0930830:intron | 25.0% |
| ! | TGCCTAAAATATATTCTCAA+TGG | + | chr6_2:79932604-79932623 | None:intergenic | 25.0% |
| ! | GCGATTAAACATAGTTATAT+TGG | - | chr6_2:79932979-79932998 | Msa0930830:intron | 25.0% |
| ! | ATGGTCGATTAAAAGTTATT+GGG | + | chr6_2:79933028-79933047 | None:intergenic | 25.0% |
| ! | AACTCTACATCATTATGTAT+GGG | + | chr6_2:79933133-79933152 | None:intergenic | 25.0% |
| ! | AAACTCTACATCATTATGTA+TGG | + | chr6_2:79933134-79933153 | None:intergenic | 25.0% |
| ! | ATACATAATGATGTAGAGTT+TGG | - | chr6_2:79933133-79933152 | Msa0930830:intron | 25.0% |
| ! | TATACTTCTGCATCATTATT+TGG | - | chr6_2:79933781-79933800 | Msa0930830:intron | 25.0% |
| ! | ATACTTCTGCATCATTATTT+GGG | - | chr6_2:79933782-79933801 | Msa0930830:intron | 25.0% |
| ! | AAAAAATTACAAGGGGAAAT+CGG | + | chr6_2:79933875-79933894 | None:intergenic | 25.0% |
| !!! | ATTTTGCCGTTTCAAAAAAA+AGG | - | chr6_2:79933945-79933964 | Msa0930830:intron | 25.0% |
| !!! | TTTTGCCGTTTCAAAAAAAA+GGG | - | chr6_2:79933946-79933965 | Msa0930830:intron | 25.0% |
| ! | CCAAAATGACAAAATTAAGT+TGG | + | chr6_2:79934350-79934369 | None:intergenic | 25.0% |
| !!! | CCAACTTAATTTTGTCATTT+TGG | - | chr6_2:79934347-79934366 | Msa0930830:intron | 25.0% |
| ! | TATTGGAAGCTTATTATAAG+AGG | - | chr6_2:79934439-79934458 | Msa0930830:CDS | 25.0% |
| !!! | TAGTATTTTAGTTGTTCTGT+TGG | - | chr6_2:79934748-79934767 | Msa0930830:intron | 25.0% |
| ! | AACAATATAGTAGAACAAAG+GGG | + | chr6_2:79934862-79934881 | None:intergenic | 25.0% |
| ! | CAACAATATAGTAGAACAAA+GGG | + | chr6_2:79934863-79934882 | None:intergenic | 25.0% |
| ! | TAAAAATACTGCTGAGTTAA+AGG | - | chr6_2:79934974-79934993 | Msa0930830:intron | 25.0% |
| ! | TTATCTTCTTCTTTCTCTTT+GGG | + | chr6_2:79935486-79935505 | None:intergenic | 25.0% |
| ! | TTTATTACAAGTTACTTCGT+TGG | - | chr6_2:79935579-79935598 | Msa0930830:intron | 25.0% |
| !!! | GGTAAACATGTTATTTTTTG+TGG | + | chr6_2:79935688-79935707 | None:intergenic | 25.0% |
| !! | GATATTTGCTGCAAATTAAA+AGG | + | chr6_2:79935787-79935806 | None:intergenic | 25.0% |
| GTAGAGAAAAAACCTGATAA+TGG | + | chr6_2:79930386-79930405 | None:intergenic | 30.0% | |
| ATGTACAAATTTACTCTCAG+AGG | - | chr6_2:79930627-79930646 | Msa0930830:CDS | 30.0% | |
| TGTACAAATTTACTCTCAGA+GGG | - | chr6_2:79930628-79930647 | Msa0930830:CDS | 30.0% | |
| GTTAAGTACGAGAGATTAAT+TGG | + | chr6_2:79931434-79931453 | None:intergenic | 30.0% | |
| ! | CAACATTTTTCACATTAGAC+AGG | + | chr6_2:79931638-79931657 | None:intergenic | 30.0% |
| ! | TGTATTTTGCATTCTTTTCC+CGG | - | chr6_2:79931726-79931745 | Msa0930830:intron | 30.0% |
| TAAATAAGACGCATATTCAC+CGG | + | chr6_2:79931748-79931767 | None:intergenic | 30.0% | |
| !! | GTGAATATGCGTCTTATTTA+TGG | - | chr6_2:79931748-79931767 | Msa0930830:intron | 30.0% |
| TTACGAAGTTCAAACAACAT+CGG | + | chr6_2:79931826-79931845 | None:intergenic | 30.0% | |
| CAATTAACGTCAAAACTCAA+AGG | + | chr6_2:79931991-79932010 | None:intergenic | 30.0% | |
| GTTAATTGAAATGCTCTTCA+TGG | - | chr6_2:79932003-79932022 | Msa0930830:intron | 30.0% | |
| AAAAATGTGACACTTCCAAA+GGG | - | chr6_2:79932083-79932102 | Msa0930830:intron | 30.0% | |
| AACTTAACATATGTTCCCTT+TGG | + | chr6_2:79932101-79932120 | None:intergenic | 30.0% | |
| TGATCTAGTGATTGATATTG+TGG | - | chr6_2:79932320-79932339 | Msa0930830:intron | 30.0% | |
| !! | TTAGAATTTTGGGTGAAAGT+GGG | + | chr6_2:79932346-79932365 | None:intergenic | 30.0% |
| ! | AAATAACCAAAAGTACATGC+TGG | + | chr6_2:79932399-79932418 | None:intergenic | 30.0% |
| !! | TGTACTTTTGGTTATTTCGT+AGG | - | chr6_2:79932402-79932421 | Msa0930830:intron | 30.0% |
| ! | GTTATTTCGTAGGAATTGTT+AGG | - | chr6_2:79932412-79932431 | Msa0930830:intron | 30.0% |
| ! | TACAAAATATAGCACTGAAC+CGG | + | chr6_2:79932448-79932467 | None:intergenic | 30.0% |
| ! | AGCCTTACCTTATTTACAAT+AGG | - | chr6_2:79932623-79932642 | Msa0930830:intron | 30.0% |
| AGCCTATTGTAAATAAGGTA+AGG | + | chr6_2:79932628-79932647 | None:intergenic | 30.0% | |
| ! | TACCTTATTTACAATAGGCT+TGG | - | chr6_2:79932628-79932647 | Msa0930830:intron | 30.0% |
| AACCAAGCCTATTGTAAATA+AGG | + | chr6_2:79932633-79932652 | None:intergenic | 30.0% | |
| !! | AGCTTGATTTGTTATCACAT+TGG | - | chr6_2:79932873-79932892 | Msa0930830:intron | 30.0% |
| ! | GGTTTATATATTTCTGTGTG+TGG | - | chr6_2:79932894-79932913 | Msa0930830:intron | 30.0% |
| ACATTCACGGTTAAATCAAA+TGG | + | chr6_2:79932957-79932976 | None:intergenic | 30.0% | |
| GATGGTCGATTAAAAGTTAT+TGG | + | chr6_2:79933029-79933048 | None:intergenic | 30.0% | |
| TACTTCTGCATCATTATTTG+GGG | - | chr6_2:79933783-79933802 | Msa0930830:intron | 30.0% | |
| !!! | TTCTTTTTGGGTGGTTTTTA+AGG | - | chr6_2:79933817-79933836 | Msa0930830:intron | 30.0% |
| !!! | TCTTTTTGGGTGGTTTTTAA+GGG | - | chr6_2:79933818-79933837 | Msa0930830:intron | 30.0% |
| AGGTGGGAAAAAAATTACAA+GGG | + | chr6_2:79933883-79933902 | None:intergenic | 30.0% | |
| !!! | TGCTTCCCTTTTTTTTGAAA+CGG | + | chr6_2:79933954-79933973 | None:intergenic | 30.0% |
| !!! | ATCCTTTTTTGTGTATGTGT+GGG | - | chr6_2:79934490-79934509 | Msa0930830:intron | 30.0% |
| ! | ACATCATGCTACTTAAAGAT+TGG | + | chr6_2:79934655-79934674 | None:intergenic | 30.0% |
| AAGTAGCATGATGTTTATGT+TGG | - | chr6_2:79934661-79934680 | Msa0930830:intron | 30.0% | |
| !!! | TGGTTTTTTTAAGTAAGAGC+TGG | - | chr6_2:79934681-79934700 | Msa0930830:intron | 30.0% |
| TTAAGTAAGAGCTGGTAATA+TGG | - | chr6_2:79934689-79934708 | Msa0930830:intron | 30.0% | |
| AAACCAATATGAGGAGTTAA+AGG | + | chr6_2:79934806-79934825 | None:intergenic | 30.0% | |
| CTAAGGTTTAAACCAATATG+AGG | + | chr6_2:79934815-79934834 | None:intergenic | 30.0% | |
| GCAACAATATAGTAGAACAA+AGG | + | chr6_2:79934864-79934883 | None:intergenic | 30.0% | |
| !!! | AATATTTTTGAGACTTCGGT+CGG | - | chr6_2:79934894-79934913 | Msa0930830:CDS | 30.0% |
| CTTATCTTCTTCTTTCTCTT+TGG | + | chr6_2:79935487-79935506 | None:intergenic | 30.0% | |
| ! | TACAAGTTTTGCAATAGACT+TGG | + | chr6_2:79935618-79935637 | None:intergenic | 30.0% |
| ATTATAAGCAAAAGACTGAC+CGG | - | chr6_2:79935656-79935675 | Msa0930830:intron | 30.0% | |
| !!! | TTATTTTTTGTGGCTTCTAC+CGG | + | chr6_2:79935678-79935697 | None:intergenic | 30.0% |
| ATGCAACCCTTTACTTTAAA+GGG | - | chr6_2:79935761-79935780 | Msa0930830:five_prime_UTR | 30.0% | |
| !! | AAAAGGCCCTTTAAAGTAAA+GGG | + | chr6_2:79935770-79935789 | None:intergenic | 30.0% |
| !! | TAAAAGGCCCTTTAAAGTAA+AGG | + | chr6_2:79935771-79935790 | None:intergenic | 30.0% |
| ATAATGGTTGATCTGAGAAG+AGG | + | chr6_2:79930370-79930389 | None:intergenic | 35.0% | |
| TTCTCAGATCAACCATTATC+AGG | - | chr6_2:79930371-79930390 | Msa0930830:three_prime_UTR | 35.0% | |
| TGGTGCGAGAAGAAATAATT+CGG | + | chr6_2:79931017-79931036 | None:intergenic | 35.0% | |
| ! | ATTATTTCTTCTCGCACCAT+CGG | - | chr6_2:79931018-79931037 | Msa0930830:CDS | 35.0% |
| AATTTACGCGTAGAAATGAG+CGG | + | chr6_2:79931058-79931077 | None:intergenic | 35.0% | |
| !! | ACACAGTTTTTCGATGGATA+TGG | - | chr6_2:79931185-79931204 | Msa0930830:intron | 35.0% |
| TTCGATGGATATGGATATCA+CGG | - | chr6_2:79931194-79931213 | Msa0930830:intron | 35.0% | |
| ! | CCTTTTCGATAAAAGAAGCA+GGG | + | chr6_2:79931250-79931269 | None:intergenic | 35.0% |
| ! | ACCTTTTCGATAAAAGAAGC+AGG | + | chr6_2:79931251-79931270 | None:intergenic | 35.0% |
| !! | TTTGTCACCACTTTCAAGTT+GGG | + | chr6_2:79931559-79931578 | None:intergenic | 35.0% |
| !! | TTTTGTCACCACTTTCAAGT+TGG | + | chr6_2:79931560-79931579 | None:intergenic | 35.0% |
| TAACTAACCTAGACGATCAA+GGG | + | chr6_2:79931687-79931706 | None:intergenic | 35.0% | |
| ATAACTAACCTAGACGATCA+AGG | + | chr6_2:79931688-79931707 | None:intergenic | 35.0% | |
| AAATAAGACGCATATTCACC+GGG | + | chr6_2:79931747-79931766 | None:intergenic | 35.0% | |
| CATGATATACATGCCATACT+GGG | - | chr6_2:79931903-79931922 | Msa0930830:CDS | 35.0% | |
| ! | GTAAGCTTGTTTCACGAATA+TGG | - | chr6_2:79931961-79931980 | Msa0930830:CDS | 35.0% |
| ATGGGTTCTTATACAGATGA+TGG | - | chr6_2:79932022-79932041 | Msa0930830:intron | 35.0% | |
| ! | GAGAACATGCTTTTACAAGA+GGG | - | chr6_2:79932044-79932063 | Msa0930830:intron | 35.0% |
| GAAAAATGTGACACTTCCAA+AGG | - | chr6_2:79932082-79932101 | Msa0930830:intron | 35.0% | |
| CTTGGATATTTCCAATCCTA+AGG | - | chr6_2:79932142-79932161 | Msa0930830:intron | 35.0% | |
| !! | TAACATAACATCGACTCACA+TGG | + | chr6_2:79932168-79932187 | None:intergenic | 35.0% |
| !! | GCAAGAGGTATTCATAAGTT+GGG | + | chr6_2:79932218-79932237 | None:intergenic | 35.0% |
| !! | TGCAAGAGGTATTCATAAGT+TGG | + | chr6_2:79932219-79932238 | None:intergenic | 35.0% |
| ACTTATGAATACCTCTTGCA+AGG | - | chr6_2:79932219-79932238 | Msa0930830:intron | 35.0% | |
| CACTGAAAGACAATGTGAAT+TGG | + | chr6_2:79932275-79932294 | None:intergenic | 35.0% | |
| !! | GTTAGAATTTTGGGTGAAAG+TGG | + | chr6_2:79932347-79932366 | None:intergenic | 35.0% |
| ! | TTGTAACCAGCATGTACTTT+TGG | - | chr6_2:79932390-79932409 | Msa0930830:intron | 35.0% |
| TACACCAGTATACTAGTGTT+TGG | + | chr6_2:79932501-79932520 | None:intergenic | 35.0% | |
| TAAATCAAACCATTGTGCCA+AGG | - | chr6_2:79932691-79932710 | Msa0930830:intron | 35.0% | |
| TTCTTCAGAGATGAGAGAAA+TGG | + | chr6_2:79932772-79932791 | None:intergenic | 35.0% | |
| ! | ATCTCTGAAGAACATTCACA+TGG | - | chr6_2:79932780-79932799 | Msa0930830:intron | 35.0% |
| TCACATTAAATTGGGGAATG+TGG | - | chr6_2:79932840-79932859 | Msa0930830:intron | 35.0% | |
| TTAAATTGGGGAATGTGGTT+TGG | - | chr6_2:79932845-79932864 | Msa0930830:intron | 35.0% | |
| TGTTTAATCGCGAACATTCA+CGG | + | chr6_2:79932970-79932989 | None:intergenic | 35.0% | |
| GTCGATTAAAAGTTATTGGG+TGG | + | chr6_2:79933025-79933044 | None:intergenic | 35.0% | |
| ATGTATGTGTACTTAGCCTA+CGG | - | chr6_2:79933050-79933069 | Msa0930830:intron | 35.0% | |
| TGGTTAATTTAATGAGCGAG+AGG | + | chr6_2:79933087-79933106 | None:intergenic | 35.0% | |
| CTATGTATAACGTAGTGAGA+TGG | + | chr6_2:79933107-79933126 | None:intergenic | 35.0% | |
| GTTCTTCTTCATCTCTCTAA+GGG | - | chr6_2:79933370-79933389 | Msa0930830:intron | 35.0% | |
| !!! | TGGGAGTTGTTTTTCTATAC+TGG | - | chr6_2:79933707-79933726 | Msa0930830:intron | 35.0% |
| !!! | GTGTCGGTTTTGTTCTTTTT+GGG | - | chr6_2:79933805-79933824 | Msa0930830:intron | 35.0% |
| !!! | CTTTTTGGGTGGTTTTTAAG+GGG | - | chr6_2:79933819-79933838 | Msa0930830:intron | 35.0% |
| GGTGGGAAAAAAATTACAAG+GGG | + | chr6_2:79933882-79933901 | None:intergenic | 35.0% | |
| CAGGTGGGAAAAAAATTACA+AGG | + | chr6_2:79933884-79933903 | None:intergenic | 35.0% | |
| ATTTACTTGCAAACACTGAC+TGG | - | chr6_2:79934045-79934064 | Msa0930830:CDS | 35.0% | |
| ! | AATTTTTCCTGCTTGACTAC+TGG | - | chr6_2:79934131-79934150 | Msa0930830:intron | 35.0% |
| CTCAATGATGCTTATAGCAT+TGG | + | chr6_2:79934222-79934241 | None:intergenic | 35.0% | |
| TCAGGTTCCTTGTAATCTAA+GGG | + | chr6_2:79934272-79934291 | None:intergenic | 35.0% | |
| ! | TTCAGGTTCCTTGTAATCTA+AGG | + | chr6_2:79934273-79934292 | None:intergenic | 35.0% |
| TAGATTACAAGGAACCTGAA+AGG | - | chr6_2:79934273-79934292 | Msa0930830:CDS | 35.0% | |
| CATGCTGCTATAATTGGTAT+TGG | - | chr6_2:79934422-79934441 | Msa0930830:intron | 35.0% | |
| !!! | CATCCTTTTTTGTGTATGTG+TGG | - | chr6_2:79934489-79934508 | Msa0930830:intron | 35.0% |
| AACCCACACATACACAAAAA+AGG | + | chr6_2:79934495-79934514 | None:intergenic | 35.0% | |
| TTGGGGAAGCTTATTATAAG+AGG | - | chr6_2:79934529-79934548 | Msa0930830:intron | 35.0% | |
| TATAGTAGAACAAAGGGGTT+GGG | + | chr6_2:79934857-79934876 | None:intergenic | 35.0% | |
| ATATAGTAGAACAAAGGGGT+TGG | + | chr6_2:79934858-79934877 | None:intergenic | 35.0% | |
| AAGAAGTGGTATTACCTTTC+CGG | + | chr6_2:79935332-79935351 | None:intergenic | 35.0% | |
| ! | TCTCCATTTTCTCTCTTTGT+AGG | - | chr6_2:79935431-79935450 | Msa0930830:five_prime_UTR | 35.0% |
| TTGCCTACAAAGAGAGAAAA+TGG | + | chr6_2:79935437-79935456 | None:intergenic | 35.0% | |
| CCTTAAAGAATACTTCTTCC+CGG | + | chr6_2:79935523-79935542 | None:intergenic | 35.0% | |
| !! | CGGGAAGAAGTATTCTTTAA+GGG | - | chr6_2:79935521-79935540 | Msa0930830:intron | 35.0% |
| !! | GGGAAGAAGTATTCTTTAAG+GGG | - | chr6_2:79935522-79935541 | Msa0930830:intron | 35.0% |
| GATGCAACCCTTTACTTTAA+AGG | - | chr6_2:79935760-79935779 | Msa0930830:five_prime_UTR | 35.0% | |
| AGCTTGAAGACTTGACACTT+TGG | - | chr6_2:79930651-79930670 | Msa0930830:CDS | 40.0% | |
| GGTGCGAGAAGAAATAATTC+GGG | + | chr6_2:79931016-79931035 | None:intergenic | 40.0% | |
| GGAAACAAAACTAATGCCGA+TGG | + | chr6_2:79931037-79931056 | None:intergenic | 40.0% | |
| TGTGTCAAGCATACAGTAAG+CGG | + | chr6_2:79931170-79931189 | None:intergenic | 40.0% | |
| !! | TGCTTGACACAGTTTTTCGA+TGG | - | chr6_2:79931179-79931198 | Msa0930830:intron | 40.0% |
| TCGATGGATATGGATATCAC+GGG | - | chr6_2:79931195-79931214 | Msa0930830:intron | 40.0% | |
| ! | CCCTGCTTCTTTTATCGAAA+AGG | - | chr6_2:79931247-79931266 | Msa0930830:intron | 40.0% |
| ! | AAAAGGTTAGCGTGCTTTTC+AGG | - | chr6_2:79931264-79931283 | Msa0930830:intron | 40.0% |
| ! | TTCCATGTCGATTGTTCATG+AGG | - | chr6_2:79931372-79931391 | Msa0930830:intron | 40.0% |
| ! | TCCATGTCGATTGTTCATGA+GGG | - | chr6_2:79931373-79931392 | Msa0930830:intron | 40.0% |
| !! | TTGTCACCACTTTCAAGTTG+GGG | + | chr6_2:79931558-79931577 | None:intergenic | 40.0% |
| TAGACAGGAACACATAGAAC+AGG | + | chr6_2:79931623-79931642 | None:intergenic | 40.0% | |
| GCATGATATACATGCCATAC+TGG | - | chr6_2:79931902-79931921 | Msa0930830:CDS | 40.0% | |
| ! | TTTTGGATGCATACCCAGTA+TGG | + | chr6_2:79931919-79931938 | None:intergenic | 40.0% |
| ! | GGAGAACATGCTTTTACAAG+AGG | - | chr6_2:79932043-79932062 | Msa0930830:intron | 40.0% |
| ! | TCCAAGAAGTCTTTTGTGTG+AGG | + | chr6_2:79932128-79932147 | None:intergenic | 40.0% |
| CAACATGACATCAAACAGCA+TGG | + | chr6_2:79932302-79932321 | None:intergenic | 40.0% | |
| AGTATACTAGTGTTTGGCTG+GGG | + | chr6_2:79932495-79932514 | None:intergenic | 40.0% | |
| CAGTATACTAGTGTTTGGCT+GGG | + | chr6_2:79932496-79932515 | None:intergenic | 40.0% | |
| TTTACCACTGCATGACTAGA+AGG | + | chr6_2:79932675-79932694 | None:intergenic | 40.0% | |
| AACAAATAAATGGGGAGCCT+TGG | + | chr6_2:79932711-79932730 | None:intergenic | 40.0% | |
| GACATTATCAAGTGAGTGTC+AGG | - | chr6_2:79932918-79932937 | Msa0930830:intron | 40.0% | |
| GCTAAGTACACATACATGGA+TGG | + | chr6_2:79933047-79933066 | None:intergenic | 40.0% | |
| GTAGGCTAAGTACACATACA+TGG | + | chr6_2:79933051-79933070 | None:intergenic | 40.0% | |
| CTATGAATTCCTGTCCACTA+TGG | - | chr6_2:79933264-79933283 | Msa0930830:intron | 40.0% | |
| TATGGATTCAGGGAAGCAAT+TGG | - | chr6_2:79933282-79933301 | Msa0930830:intron | 40.0% | |
| GGTTCTTCTTCATCTCTCTA+AGG | - | chr6_2:79933369-79933388 | Msa0930830:intron | 40.0% | |
| ! | CTTCTGTGCTTTGTGCTTTT+GGG | - | chr6_2:79933418-79933437 | Msa0930830:intron | 40.0% |
| ! | TTCTGTGCTTTGTGCTTTTG+GGG | - | chr6_2:79933419-79933438 | Msa0930830:intron | 40.0% |
| !! | TTATGAGGGTAGTTGATGGT+AGG | - | chr6_2:79933602-79933621 | Msa0930830:intron | 40.0% |
| !! | GCAGTTCTTTGTGGTTTGTT+GGG | - | chr6_2:79933688-79933707 | Msa0930830:intron | 40.0% |
| !!! | TCTATACTGGTTTTGCTGCA+TGG | - | chr6_2:79933720-79933739 | Msa0930830:intron | 40.0% |
| !!! | CTATACTGGTTTTGCTGCAT+GGG | - | chr6_2:79933721-79933740 | Msa0930830:intron | 40.0% |
| ! | CAGAAGTATACAAGCAACAG+CGG | + | chr6_2:79933771-79933790 | None:intergenic | 40.0% |
| ! | TGCATCATTATTTGGGGTGT+CGG | - | chr6_2:79933789-79933808 | Msa0930830:intron | 40.0% |
| !!! | GGTGTCGGTTTTGTTCTTTT+TGG | - | chr6_2:79933804-79933823 | Msa0930830:intron | 40.0% |
| !!! | TCGGTTTTGTTCTTTTTGGG+TGG | - | chr6_2:79933808-79933827 | Msa0930830:intron | 40.0% |
| GACTACTGGAGATAGCATTA+TGG | - | chr6_2:79934145-79934164 | Msa0930830:intron | 40.0% | |
| TACTGGAGATAGCATTATGG+TGG | - | chr6_2:79934148-79934167 | Msa0930830:intron | 40.0% | |
| !! | ATGATGCTTATAGCATTGGC+AGG | + | chr6_2:79934218-79934237 | None:intergenic | 40.0% |
| TTTGGTCTCGTCTCTATTGT+TGG | - | chr6_2:79934365-79934384 | Msa0930830:intron | 40.0% | |
| TTGGTCTCGTCTCTATTGTT+GGG | - | chr6_2:79934366-79934385 | Msa0930830:intron | 40.0% | |
| GCAACACACATACACACATA+AGG | + | chr6_2:79934403-79934422 | None:intergenic | 40.0% | |
| GTGTTGCATGCTGCTATAAT+TGG | - | chr6_2:79934416-79934435 | Msa0930830:intron | 40.0% | |
| AGAGGTTGAATTCATGTCGT+TGG | - | chr6_2:79934457-79934476 | Msa0930830:intron | 40.0% | |
| GAGGTTGAATTCATGTCGTT+GGG | - | chr6_2:79934458-79934477 | Msa0930830:intron | 40.0% | |
| TTGAATTCATGTCGTTGGGA+TGG | - | chr6_2:79934462-79934481 | Msa0930830:intron | 40.0% | |
| GGTTGCATGCTGCTATAATT+GGG | - | chr6_2:79934511-79934530 | Msa0930830:intron | 40.0% | |
| GTTGCATGCTGCTATAATTG+GGG | - | chr6_2:79934418-79934437 | Msa0930830:intron | 40.0% | |
| ATTGTCTCCTTTACCAGAGT+TGG | - | chr6_2:79934772-79934791 | Msa0930830:intron | 40.0% | |
| GGTCCTTTAACTCCTCATAT+TGG | - | chr6_2:79934800-79934819 | Msa0930830:intron | 40.0% | |
| ! | AGCTCAACTTGTTTGAGCTA+AGG | + | chr6_2:79934832-79934851 | None:intergenic | 40.0% |
| ATAGTAGAACAAAGGGGTTG+GGG | + | chr6_2:79934856-79934875 | None:intergenic | 40.0% | |
| ! | ACTTTGGTTCAGTTTCAGCA+GGG | + | chr6_2:79935099-79935118 | None:intergenic | 40.0% |
| ! | AACTTTGGTTCAGTTTCAGC+AGG | + | chr6_2:79935100-79935119 | None:intergenic | 40.0% |
| !! | CCAGTAAATGGGTTGAACTT+TGG | + | chr6_2:79935115-79935134 | None:intergenic | 40.0% |
| CCAAAGTTCAACCCATTTAC+TGG | - | chr6_2:79935112-79935131 | Msa0930830:intron | 40.0% | |
| TTCAACCCATTTACTGGATC+TGG | - | chr6_2:79935118-79935137 | Msa0930830:intron | 40.0% | |
| TCAACCCATTTACTGGATCT+GGG | - | chr6_2:79935119-79935138 | Msa0930830:intron | 40.0% | |
| ! | GAATTGACATTTTGAGCAGC+AGG | + | chr6_2:79935217-79935236 | None:intergenic | 40.0% |
| ACTTTGTGAACTAGAAGCTG+TGG | + | chr6_2:79935248-79935267 | None:intergenic | 40.0% | |
| AAGTAATGCTCCTCAAACTC+AGG | - | chr6_2:79935264-79935283 | Msa0930830:intron | 40.0% | |
| AGTAATGCTCCTCAAACTCA+GGG | - | chr6_2:79935265-79935284 | Msa0930830:intron | 40.0% | |
| TTACCACTGAAAGGAGGATA+GGG | + | chr6_2:79935394-79935413 | None:intergenic | 40.0% | |
| ATTACCACTGAAAGGAGGAT+AGG | + | chr6_2:79935395-79935414 | None:intergenic | 40.0% | |
| CATCAATTACCACTGAAAGG+AGG | + | chr6_2:79935400-79935419 | None:intergenic | 40.0% | |
| CTCCTTTCAGTGGTAATTGA+TGG | - | chr6_2:79935398-79935417 | Msa0930830:intron | 40.0% | |
| GTCCATCAATTACCACTGAA+AGG | + | chr6_2:79935403-79935422 | None:intergenic | 40.0% | |
| TCTTCTTCTTTCTCTTTGGG+TGG | + | chr6_2:79935483-79935502 | None:intergenic | 40.0% | |
| GATAAGTTTCAGCCTTTCAC+CGG | - | chr6_2:79935501-79935520 | Msa0930830:intron | 40.0% | |
| ATAAGTTTCAGCCTTTCACC+GGG | - | chr6_2:79935502-79935521 | Msa0930830:intron | 40.0% | |
| !! | CCGGGAAGAAGTATTCTTTA+AGG | - | chr6_2:79935520-79935539 | Msa0930830:intron | 40.0% |
| AATGAACGCGTATTCTTCTC+TGG | - | chr6_2:79935729-79935748 | Msa0930830:intron | 40.0% | |
| !! | GTATTCTTCTCTGGAGCAAA+GGG | - | chr6_2:79935738-79935757 | Msa0930830:five_prime_UTR | 40.0% |
| ACCCTCATGAACAATCGACA+TGG | + | chr6_2:79931377-79931396 | None:intergenic | 45.0% | |
| GGTTTCTCATTGTGGTGTTC+TGG | - | chr6_2:79931861-79931880 | Msa0930830:CDS | 45.0% | |
| !! | TGTTCTGGAGTTCATTGCTG+AGG | - | chr6_2:79931876-79931895 | Msa0930830:CDS | 45.0% |
| GCCTCACACAAAAGACTTCT+TGG | - | chr6_2:79932124-79932143 | Msa0930830:intron | 45.0% | |
| GTATACTAGTGTTTGGCTGG+GGG | + | chr6_2:79932494-79932513 | None:intergenic | 45.0% | |
| CCAGTATACTAGTGTTTGGC+TGG | + | chr6_2:79932497-79932516 | None:intergenic | 45.0% | |
| CCAGCCAAACACTAGTATAC+TGG | - | chr6_2:79932494-79932513 | Msa0930830:intron | 45.0% | |
| TACCAAACTCTTGCCATGGA+AGG | - | chr6_2:79932571-79932590 | Msa0930830:intron | 45.0% | |
| ACCAAACTCTTGCCATGGAA+GGG | - | chr6_2:79932572-79932591 | Msa0930830:intron | 45.0% | |
| TCAGAGATGAGAGAAATGGC+AGG | + | chr6_2:79932768-79932787 | None:intergenic | 45.0% | |
| AGAGGAGTAAACATAGCCGT+AGG | + | chr6_2:79933069-79933088 | None:intergenic | 45.0% | |
| TTCCTGTCCACTATGGATTC+AGG | - | chr6_2:79933271-79933290 | Msa0930830:intron | 45.0% | |
| TCCTGTCCACTATGGATTCA+GGG | - | chr6_2:79933272-79933291 | Msa0930830:intron | 45.0% | |
| TTGCTTCCCTGAATCCATAG+TGG | + | chr6_2:79933281-79933300 | None:intergenic | 45.0% | |
| ATTCAGGGAAGCAATTGGTG+CGG | - | chr6_2:79933287-79933306 | Msa0930830:intron | 45.0% | |
| !! | TAAGGGTGCAGTTTTTGTCC+TGG | - | chr6_2:79933387-79933406 | Msa0930830:intron | 45.0% |
| AAGCACAAAGCACAGAAGGA+CGG | + | chr6_2:79933416-79933435 | None:intergenic | 45.0% | |
| ! | CCAAAAGCACAAAGCACAGA+AGG | + | chr6_2:79933420-79933439 | None:intergenic | 45.0% |
| ! | CCTTCTGTGCTTTGTGCTTT+TGG | - | chr6_2:79933417-79933436 | Msa0930830:intron | 45.0% |
| ! | TCTGTGCTTTGTGCTTTTGG+GGG | - | chr6_2:79933420-79933439 | Msa0930830:intron | 45.0% |
| TCGGTTATGAGGGTAGTTGA+TGG | - | chr6_2:79933598-79933617 | Msa0930830:intron | 45.0% | |
| !! | GTAGTTGATGGTAGGAAGGT+GGG | - | chr6_2:79933610-79933629 | Msa0930830:intron | 45.0% |
| !!! | TGCGCTTCTGCTGTTGTTTT+TGG | - | chr6_2:79933657-79933676 | Msa0930830:intron | 45.0% |
| !!! | GCGCTTCTGCTGTTGTTTTT+GGG | - | chr6_2:79933658-79933677 | Msa0930830:intron | 45.0% |
| !!! | CGCTTCTGCTGTTGTTTTTG+GGG | - | chr6_2:79933659-79933678 | Msa0930830:intron | 45.0% |
| !!! | GCTTCTGCTGTTGTTTTTGG+GGG | - | chr6_2:79933660-79933679 | Msa0930830:intron | 45.0% |
| !!! | GCTGTTGTTTTTGGGGGTTT+AGG | - | chr6_2:79933666-79933685 | Msa0930830:intron | 45.0% |
| ! | GGCAGTTCTTTGTGGTTTGT+TGG | - | chr6_2:79933687-79933706 | Msa0930830:intron | 45.0% |
| ATCGGTTGCCACAAAGGAAT+CGG | + | chr6_2:79933857-79933876 | None:intergenic | 45.0% | |
| GTGCACTAATAAGCTCAGGT+GGG | + | chr6_2:79933899-79933918 | None:intergenic | 45.0% | |
| ! | TTGCAAACACTGACTGGAGT+TGG | - | chr6_2:79934051-79934070 | Msa0930830:CDS | 45.0% |
| CCAAGCTGCATGAGAAAACA+TGG | + | chr6_2:79934097-79934116 | None:intergenic | 45.0% | |
| ! | CCATGTTTTCTCATGCAGCT+TGG | - | chr6_2:79934094-79934113 | Msa0930830:intron | 45.0% |
| GCAGCTTGGAAACTACATTG+AGG | - | chr6_2:79934108-79934127 | Msa0930830:intron | 45.0% | |
| TTCCTTGTAATCTAAGGGCG+GGG | + | chr6_2:79934267-79934286 | None:intergenic | 45.0% | |
| GTTCCTTGTAATCTAAGGGC+GGG | + | chr6_2:79934268-79934287 | None:intergenic | 45.0% | |
| GGTTCCTTGTAATCTAAGGG+CGG | + | chr6_2:79934269-79934288 | None:intergenic | 45.0% | |
| CAAACCATTACCAGCTTCTG+GGG | + | chr6_2:79934327-79934346 | None:intergenic | 45.0% | |
| GCAAACCATTACCAGCTTCT+GGG | + | chr6_2:79934328-79934347 | None:intergenic | 45.0% | |
| TCTCGTCTCTATTGTTGGGA+TGG | - | chr6_2:79934370-79934389 | Msa0930830:intron | 45.0% | |
| CTCGTCTCTATTGTTGGGAT+GGG | - | chr6_2:79934371-79934390 | Msa0930830:intron | 45.0% | |
| GGGTTGCATGCTGCTATAAT+TGG | - | chr6_2:79934510-79934529 | Msa0930830:intron | 45.0% | |
| CAGGGGCTTCTTTATCTGTA+AGG | + | chr6_2:79935081-79935100 | None:intergenic | 45.0% | |
| ! | CTTTGGTTCAGTTTCAGCAG+GGG | + | chr6_2:79935098-79935117 | None:intergenic | 45.0% |
| GTCTCCCAGATCCAGTAAAT+GGG | + | chr6_2:79935126-79935145 | None:intergenic | 45.0% | |
| GGTGGAGGCTGATAATTCAA+AGG | + | chr6_2:79935163-79935182 | None:intergenic | 45.0% | |
| TGTGAACTAGAAGCTGTGGA+AGG | + | chr6_2:79935244-79935263 | None:intergenic | 45.0% | |
| TTACCCTATCCTCCTTTCAG+TGG | - | chr6_2:79935388-79935407 | Msa0930830:intron | 45.0% | |
| !! | CTCTTGCTTTGCTTTTGCCT+CGG | + | chr6_2:79935460-79935479 | None:intergenic | 45.0% |
| GAATACTTCTTCCCGGTGAA+AGG | + | chr6_2:79935516-79935535 | None:intergenic | 45.0% | |
| ATAGACTTGGATCCATGCAC+AGG | + | chr6_2:79935605-79935624 | None:intergenic | 45.0% | |
| !! | CGTATTCTTCTCTGGAGCAA+AGG | - | chr6_2:79935737-79935756 | Msa0930830:five_prime_UTR | 45.0% |
| TTCGTAATGCTGCTGCTGAG+CGG | - | chr6_2:79931839-79931858 | Msa0930830:CDS | 50.0% | |
| CTGGAGTTCATTGCTGAGGA+AGG | - | chr6_2:79931880-79931899 | Msa0930830:CDS | 50.0% | |
| ! | GACTCACATGGCCTTAGGAT+TGG | + | chr6_2:79932156-79932175 | None:intergenic | 50.0% |
| !! | ACATCGACTCACATGGCCTT+AGG | + | chr6_2:79932161-79932180 | None:intergenic | 50.0% |
| CAGAGTTGCATCCTTGCAAG+AGG | + | chr6_2:79932233-79932252 | None:intergenic | 50.0% | |
| ! | AAGAGTTTGGTAGCACCGGA+CGG | + | chr6_2:79932563-79932582 | None:intergenic | 50.0% |
| ! | TGGCAAGAGTTTGGTAGCAC+CGG | + | chr6_2:79932567-79932586 | None:intergenic | 50.0% |
| GTGCTACCAAACTCTTGCCA+TGG | - | chr6_2:79932567-79932586 | Msa0930830:intron | 50.0% | |
| ACCCTTCCATGGCAAGAGTT+TGG | + | chr6_2:79932576-79932595 | None:intergenic | 50.0% | |
| AACTCTTGCCATGGAAGGGT+TGG | - | chr6_2:79932576-79932595 | Msa0930830:intron | 50.0% | |
| CAATGGATCCAACCCTTCCA+TGG | + | chr6_2:79932587-79932606 | None:intergenic | 50.0% | |
| CTGCATGACTAGAAGGTCAC+AGG | + | chr6_2:79932668-79932687 | None:intergenic | 50.0% | |
| GTGACCTTCTAGTCATGCAG+TGG | - | chr6_2:79932668-79932687 | Msa0930830:intron | 50.0% | |
| !! | TCCCTGAATCCATAGTGGAC+AGG | + | chr6_2:79933276-79933295 | None:intergenic | 50.0% |
| TTCAGGGAAGCAATTGGTGC+GGG | - | chr6_2:79933288-79933307 | Msa0930830:intron | 50.0% | |
| ! | GGTGCTGTGTTCGGTTATGA+GGG | - | chr6_2:79933588-79933607 | Msa0930830:intron | 50.0% |
| !! | GAGGGTAGTTGATGGTAGGA+AGG | - | chr6_2:79933606-79933625 | Msa0930830:intron | 50.0% |
| !! | GGTAGTTGATGGTAGGAAGG+TGG | - | chr6_2:79933609-79933628 | Msa0930830:intron | 50.0% |
| GTCAGCTGGTTGTGTTCTTG+TGG | - | chr6_2:79933632-79933651 | Msa0930830:intron | 50.0% | |
| GGGGTTTAGGCAGTTCTTTG+TGG | - | chr6_2:79933679-79933698 | Msa0930830:intron | 50.0% | |
| ! | GTTTTGCTGCATGGGTAGTG+AGG | - | chr6_2:79933729-79933748 | Msa0930830:intron | 50.0% |
| ! | TGTTCGAGCCGATTCCTTTG+TGG | - | chr6_2:79933846-79933865 | Msa0930830:intron | 50.0% |
| GGTGCACTAATAAGCTCAGG+TGG | + | chr6_2:79933900-79933919 | None:intergenic | 50.0% | |
| CGAGGTGCACTAATAAGCTC+AGG | + | chr6_2:79933903-79933922 | None:intergenic | 50.0% | |
| GCTTATTAGTGCACCTCGCA+CGG | - | chr6_2:79933905-79933924 | Msa0930830:intron | 50.0% | |
| CTTATTAGTGCACCTCGCAC+GGG | - | chr6_2:79933906-79933925 | Msa0930830:intron | 50.0% | |
| GCTATCTCCAGTAGTCAAGC+AGG | + | chr6_2:79934141-79934160 | None:intergenic | 50.0% | |
| CATTGAGACCGACTGTGAAG+TGG | - | chr6_2:79934235-79934254 | Msa0930830:CDS | 50.0% | |
| GGCAAACCATTACCAGCTTC+TGG | + | chr6_2:79934329-79934348 | None:intergenic | 50.0% | |
| CCAGAGTCCAACTCTGGTAA+AGG | + | chr6_2:79934782-79934801 | None:intergenic | 50.0% | |
| CCTTTACCAGAGTTGGACTC+TGG | - | chr6_2:79934779-79934798 | Msa0930830:intron | 50.0% | |
| AAAGGACCAGAGTCCAACTC+TGG | + | chr6_2:79934788-79934807 | None:intergenic | 50.0% | |
| CGTCTCCCAGATCCAGTAAA+TGG | + | chr6_2:79935127-79935146 | None:intergenic | 50.0% | |
| CCTCCACCAGTTTCTTCTTC+CGG | - | chr6_2:79935175-79935194 | Msa0930830:intron | 50.0% | |
| CTCCACCAGTTTCTTCTTCC+GGG | - | chr6_2:79935176-79935195 | Msa0930830:intron | 50.0% | |
| TTGGACCCGGAAGAAGAAAC+TGG | + | chr6_2:79935184-79935203 | None:intergenic | 50.0% | |
| AGTTTCTTCTTCCGGGTCCA+AGG | - | chr6_2:79935183-79935202 | Msa0930830:intron | 50.0% | |
| AGGATTCTTGTCCTTGGACC+CGG | + | chr6_2:79935197-79935216 | None:intergenic | 50.0% | |
| AGCAGCAGGATTCTTGTCCT+TGG | + | chr6_2:79935203-79935222 | None:intergenic | 50.0% | |
| ACAAGCTTGCCCTGAGTTTG+AGG | + | chr6_2:79935277-79935296 | None:intergenic | 50.0% | |
| ACTCAGGGCAAGCTTGTGTT+TGG | - | chr6_2:79935280-79935299 | Msa0930830:intron | 50.0% | |
| CTCAGGGCAAGCTTGTGTTT+GGG | - | chr6_2:79935281-79935300 | Msa0930830:intron | 50.0% | |
| TCTCTCTTTGTAGGCAACCG+AGG | - | chr6_2:79935440-79935459 | Msa0930830:five_prime_UTR | 50.0% | |
| ! | TTACTTCGTTGGCCTGTGCA+TGG | - | chr6_2:79935590-79935609 | Msa0930830:intron | 50.0% |
| !! | CACTTTCAAGTTGGGGCTGC+AGG | + | chr6_2:79931551-79931570 | None:intergenic | 55.0% |
| CTGCAGCCCCAACTTGAAAG+TGG | - | chr6_2:79931549-79931568 | Msa0930830:intron | 55.0% | |
| AGACGATCAAGGGCTGATGG+AGG | + | chr6_2:79931677-79931696 | None:intergenic | 55.0% | |
| CCTAGACGATCAAGGGCTGA+TGG | + | chr6_2:79931680-79931699 | None:intergenic | 55.0% | |
| CCATCAGCCCTTGATCGTCT+AGG | - | chr6_2:79931677-79931696 | Msa0930830:intron | 55.0% | |
| TCGTAATGCTGCTGCTGAGC+GGG | - | chr6_2:79931840-79931859 | Msa0930830:CDS | 55.0% | |
| ! | GCTGAGCGGGTTTCTCATTG+TGG | - | chr6_2:79931853-79931872 | Msa0930830:CDS | 55.0% |
| AATGGGGAGCCTTGGCACAA+TGG | + | chr6_2:79932703-79932722 | None:intergenic | 55.0% | |
| TCAGGGAAGCAATTGGTGCG+GGG | - | chr6_2:79933289-79933308 | Msa0930830:intron | 55.0% | |
| ! | GCGGGGGTAGTTCTTTTGTG+AGG | - | chr6_2:79933306-79933325 | Msa0930830:intron | 55.0% |
| GTGAGGCTGCCTGTTTGTGT+TGG | - | chr6_2:79933323-79933342 | Msa0930830:intron | 55.0% | |
| AGGCTGCCTGTTTGTGTTGG+TGG | - | chr6_2:79933326-79933345 | Msa0930830:intron | 55.0% | |
| !! | TGCCTGTTTGTGTTGGTGGC+TGG | - | chr6_2:79933330-79933349 | Msa0930830:intron | 55.0% |
| CACCAGCCACCAACACAAAC+AGG | + | chr6_2:79933335-79933354 | None:intergenic | 55.0% | |
| ATCCCTAAGAGCCGCAAGCA+CGG | + | chr6_2:79933467-79933486 | None:intergenic | 55.0% | |
| GATGCTGTTGTGCGACACAC+TGG | - | chr6_2:79933484-79933503 | Msa0930830:intron | 55.0% | |
| ATCCCTAAGAGCCGCAAGCA+CGG | + | chr6_2:79933467-79933486 | None:intergenic | 55.0% | |
| GATGCTGTTGTGCGACACAC+TGG | - | chr6_2:79933484-79933503 | Msa0930830:intron | 55.0% | |
| !! | CTGTTGCAGGGTGCTGTGTT+CGG | - | chr6_2:79933579-79933598 | Msa0930830:intron | 55.0% |
| ! | GGGTGCTGTGTTCGGTTATG+AGG | - | chr6_2:79933587-79933606 | Msa0930830:intron | 55.0% |
| GGGGAAATCGGTTGCCACAA+AGG | + | chr6_2:79933863-79933882 | None:intergenic | 55.0% | |
| GGCGAAGTCCACTTCACAGT+CGG | + | chr6_2:79934246-79934265 | None:intergenic | 55.0% | |
| AAGGCCCCAGAAGCTGGTAA+TGG | - | chr6_2:79934320-79934339 | Msa0930830:intron | 55.0% | |
| TACTGGATCTGGGAGACGCT+TGG | - | chr6_2:79935129-79935148 | Msa0930830:intron | 55.0% | |
| CCGGAAGAAGAAACTGGTGG+AGG | + | chr6_2:79935178-79935197 | None:intergenic | 55.0% | |
| GACCCGGAAGAAGAAACTGG+TGG | + | chr6_2:79935181-79935200 | None:intergenic | 55.0% | |
| CCTTTCCGGTCTCTTTACCG+CGG | + | chr6_2:79935318-79935337 | None:intergenic | 55.0% | |
| CAGGGAAGCAATTGGTGCGG+GGG | - | chr6_2:79933290-79933309 | Msa0930830:intron | 60.0% | |
| !! | TGTTGGTGGCTGGTGTGTGC+TGG | - | chr6_2:79933340-79933359 | Msa0930830:intron | 60.0% |
| ! | AGCACAGAAGGACGGACTCC+AGG | + | chr6_2:79933408-79933427 | None:intergenic | 60.0% |
| !! | GCTTTGTGCTTTTGGGGGCG+TGG | - | chr6_2:79933425-79933444 | Msa0930830:intron | 60.0% |
| ! | ACACACTGGCTGCCTGTTGC+AGG | - | chr6_2:79933498-79933517 | Msa0930830:intron | 60.0% |
| ! | CACACTGGCTGCCTGTTGCA+GGG | - | chr6_2:79933499-79933518 | Msa0930830:intron | 60.0% |
| ! | ACACACTGGCTGCCTGTTGC+AGG | - | chr6_2:79933498-79933517 | Msa0930830:intron | 60.0% |
| ! | CACACTGGCTGCCTGTTGCA+GGG | - | chr6_2:79933499-79933518 | Msa0930830:intron | 60.0% |
| CGAACACAGCACCCTGCAAC+AGG | + | chr6_2:79933581-79933600 | None:intergenic | 60.0% | |
| TGGTAGGAAGGTGGGTCAGC+TGG | - | chr6_2:79933618-79933637 | Msa0930830:intron | 60.0% | |
| CTGCATGGGTAGTGAGGCTG+TGG | - | chr6_2:79933735-79933754 | Msa0930830:intron | 60.0% | |
| TTAACCAACGAGCCCGTGCG+AGG | + | chr6_2:79933921-79933940 | None:intergenic | 60.0% | |
| CGCCCCGCCCTTAGATTACA+AGG | - | chr6_2:79934262-79934281 | Msa0930830:CDS | 60.0% | |
| TCCGGCAGAACGTGGAGCAA+CGG | + | chr6_2:79934300-79934319 | None:intergenic | 60.0% | |
| TGCTCCACGTTCTGCCGGAA+AGG | - | chr6_2:79934301-79934320 | Msa0930830:CDS | 60.0% | |
| !! | ACCAGCTTCTGGGGCCTTTC+CGG | + | chr6_2:79934318-79934337 | None:intergenic | 60.0% |
| GGATCTGGGAGACGCTTGGA+CGG | - | chr6_2:79935133-79935152 | Msa0930830:intron | 60.0% | |
| CCGCGGTAAAGAGACCGGAA+AGG | - | chr6_2:79935315-79935334 | Msa0930830:intron | 60.0% | |
| !! | GTGGCTGGTGTGTGCTGGCT+GGG | - | chr6_2:79933345-79933364 | Msa0930830:intron | 65.0% |
| GGCGTGGTTCAGCAGTGTGG+TGG | - | chr6_2:79933441-79933460 | Msa0930830:intron | 65.0% | |
| CAGTGTGGTGGCCGTGCTTG+CGG | - | chr6_2:79933453-79933472 | Msa0930830:intron | 65.0% | |
| TGGCCGTGCTTGCGGCTCTT+AGG | - | chr6_2:79933461-79933480 | Msa0930830:intron | 65.0% | |
| GGCCGTGCTTGCGGCTCTTA+GGG | - | chr6_2:79933462-79933481 | Msa0930830:intron | 65.0% | |
| !! | GCCTGTTGCAGGGTGCTGTG+TGG | - | chr6_2:79933509-79933528 | Msa0930830:intron | 65.0% |
| GCCACACAGCACCCTGCAAC+AGG | + | chr6_2:79933513-79933532 | None:intergenic | 65.0% | |
| GTGCTGTGTGGCCGTGCTTG+CGG | - | chr6_2:79933521-79933540 | Msa0930830:intron | 65.0% | |
| TGGCCGTGCTTGCGGCTCTT+AGG | - | chr6_2:79933461-79933480 | Msa0930830:intron | 65.0% | |
| GGCCGTGCTTGCGGCTCTTA+GGG | - | chr6_2:79933462-79933481 | Msa0930830:intron | 65.0% | |
| CGTGGAGCAACGGGCCTTTC+AGG | + | chr6_2:79934290-79934309 | None:intergenic | 65.0% | |
| CCGGCAGAACGTGGAGCAAC+GGG | + | chr6_2:79934299-79934318 | None:intergenic | 65.0% | |
| CCCGTTGCTCCACGTTCTGC+CGG | - | chr6_2:79934296-79934315 | Msa0930830:CDS | 65.0% | |
| ! | GGTGGCTGGTGTGTGCTGGC+TGG | - | chr6_2:79933344-79933363 | Msa0930830:intron | 70.0% |
| !! | GCTGGTGTGTGCTGGCTGGG+CGG | - | chr6_2:79933348-79933367 | Msa0930830:intron | 70.0% |
| ! | GGGGGCGTGGTTCAGCAGTG+TGG | - | chr6_2:79933438-79933457 | Msa0930830:intron | 70.0% |
| TGCACCTCGCACGGGCTCGT+TGG | - | chr6_2:79933914-79933933 | Msa0930830:intron | 70.0% | |
| GGGGCCTTTCCGGCAGAACG+TGG | + | chr6_2:79934308-79934327 | None:intergenic | 70.0% | |
| GCCGGAAAGGCCCCAGAAGC+TGG | - | chr6_2:79934314-79934333 | Msa0930830:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 79930313 | 79935813 | 79930313 | ID=Msa0930830;Name=Msa0930830 |
| chr6_2 | mRNA | 79930313 | 79935813 | 79930313 | ID=Msa0930830-mRNA-1;Parent=Msa0930830;Name=Msa0930830-mRNA-1;_AED=0.01;_eAED=0.01;_QI=130|1|1|1|0.88|0.8|10|265|320 |
| chr6_2 | exon | 79930313 | 79930673 | 79930313 | ID=Msa0930830-mRNA-1:exon:13965;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79930790 | 79931040 | 79930790 | ID=Msa0930830-mRNA-1:exon:13964;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79931791 | 79932014 | 79931791 | ID=Msa0930830-mRNA-1:exon:13963;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79933958 | 79934088 | 79933958 | ID=Msa0930830-mRNA-1:exon:13962;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79934202 | 79934323 | 79934202 | ID=Msa0930830-mRNA-1:exon:13961;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79934428 | 79934460 | 79934428 | ID=Msa0930830-mRNA-1:exon:13960;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79934547 | 79934571 | 79934547 | ID=Msa0930830-mRNA-1:exon:13959;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79934858 | 79934935 | 79934858 | ID=Msa0930830-mRNA-1:exon:13958;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79935427 | 79935479 | 79935427 | ID=Msa0930830-mRNA-1:exon:13957;Parent=Msa0930830-mRNA-1 |
| chr6_2 | exon | 79935734 | 79935813 | 79935734 | ID=Msa0930830-mRNA-1:exon:13956;Parent=Msa0930830-mRNA-1 |
| chr6_2 | five_prime_UTR | 79935734 | 79935813 | 79935734 | ID=Msa0930830-mRNA-1:five_prime_utr;Parent=Msa0930830-mRNA-1 |
| chr6_2 | five_prime_UTR | 79935430 | 79935479 | 79935430 | ID=Msa0930830-mRNA-1:five_prime_utr;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79935427 | 79935429 | 79935427 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79934858 | 79934935 | 79934858 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79934547 | 79934571 | 79934547 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79934428 | 79934460 | 79934428 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79934202 | 79934323 | 79934202 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79933958 | 79934088 | 79933958 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79931791 | 79932014 | 79931791 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79930790 | 79931040 | 79930790 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | CDS | 79930578 | 79930673 | 79930578 | ID=Msa0930830-mRNA-1:cds;Parent=Msa0930830-mRNA-1 |
| chr6_2 | three_prime_UTR | 79930313 | 79930577 | 79930313 | ID=Msa0930830-mRNA-1:three_prime_utr;Parent=Msa0930830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
