AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0624930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624930 MtrunA17_Chr4g0011301 93.997 733 23 3 2 713 3 735 0.0 1397
Msa0624930 MtrunA17_Chr1g0213271 82.743 678 96 3 56 712 57 734 0.0 1151
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624930 AT2G45290.1 74.832 743 155 6 1 713 1 741 0.0 1124
Msa0624930 AT2G45290.2 74.832 743 155 6 1 713 1 741 0.0 1124
Msa0624930 AT3G60750.1 74.293 743 159 6 1 713 1 741 0.0 1110
Msa0624930 AT3G60750.2 74.293 743 158 7 1 713 1 740 0.0 1106

Find 227 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTGGGTGGCATGTTATT+TGG 0.165907 4_3:+3737198 Msa0624930:CDS
TCTTGTGGCATCAACTTCTT+TGG 0.239047 4_3:-3737883 None:intergenic
TTCTATAGGTATTGTATATT+GGG 0.257909 4_3:+3737017 Msa0624930:intron
TTTCTATAGGTATTGTATAT+TGG 0.260478 4_3:+3737016 Msa0624930:intron
TGGGAGTGTGGGTGCGGTTG+AGG 0.263742 4_3:-3734893 None:intergenic
TACACTGAACCAGTCCTCTT+TGG 0.274918 4_3:+3734567 Msa0624930:five_prime_UTR
GAGTTGTTTCCTTTGTTTCT+TGG 0.277523 4_3:+3739026 Msa0624930:CDS
TATGCTTTGCTTCATCTTGC+TGG 0.279540 4_3:+3735212 Msa0624930:CDS
GGATTGAGAGAGGTGGGTGG+TGG 0.281918 4_3:-3734913 None:intergenic
GGGCGGAGCATCAAGATATT+TGG 0.302288 4_3:-3738747 None:intergenic
CTGTAGGAGTTGGATTTATT+CGG 0.309810 4_3:-3737837 None:intergenic
AGTTGTTTCCTTTGTTTCTT+GGG 0.312843 4_3:+3739027 Msa0624930:CDS
ACTCTCAGTGAACGCGATTT+CGG 0.313774 4_3:-3737156 None:intergenic
GTTAAACCAAAACGGATTCT+TGG 0.316196 4_3:-3735144 None:intergenic
ACTTGGGTGGCATGTTATTT+GGG 0.323384 4_3:+3737199 Msa0624930:CDS
ACAAAGTTGCGGTGCTTAAC+AGG 0.328102 4_3:+3738798 Msa0624930:CDS
CCAGGAGTTTCAAAATTCTC+AGG 0.328165 4_3:-3736615 None:intergenic
GCAATCGGCATTGATCGTTT+TGG 0.329334 4_3:+3739175 Msa0624930:CDS
AATGAAGCTTGCTCACTTGC+AGG 0.330765 4_3:+3737068 Msa0624930:CDS
GGGAGTGTGGGTGCGGTTGA+GGG 0.331266 4_3:-3734892 None:intergenic
TAGAGCACCTGGCAAGCTTC+CGG 0.331331 4_3:+3738718 Msa0624930:CDS
AGAGGTGGGTGGTGGGAGTG+TGG 0.331392 4_3:-3734905 None:intergenic
GTTGCATCGGCAGGGATCTC+TGG 0.332471 4_3:-3738333 None:intergenic
GAACATTCGCAAGGGCATTA+AGG 0.334104 4_3:-3738377 None:intergenic
TCGCAGTTCACAACAACTAT+TGG 0.337717 4_3:+3737804 Msa0624930:intron
CGGTTGAGGGTGATGGTGGA+TGG 0.338201 4_3:-3734879 None:intergenic
TGAAATTCGTGCTGCCATTA+AGG 0.343448 4_3:+3737247 Msa0624930:CDS
GATCGGAACCGGTTCCGAAT+TGG 0.348733 4_3:+3738952 Msa0624930:CDS
GCCCTTGCGAATGTTCTTCC+CGG 0.361812 4_3:+3738384 Msa0624930:CDS
CCGTTTCCTCGCGGTTGATT+CGG 0.361888 4_3:+3735031 Msa0624930:CDS
TGCAATTTCCAATTCGGAAC+CGG 0.369729 4_3:-3738960 None:intergenic
TTCACAACAACTATTGGTTA+TGG 0.371247 4_3:+3737810 Msa0624930:CDS
GAGGTGGGTGGTGGGAGTGT+GGG 0.372394 4_3:-3734904 None:intergenic
GTGGGTGCGGTTGAGGGTGA+TGG 0.372867 4_3:-3734886 None:intergenic
ACCTATGGGTTGTGCTCCAA+TGG 0.375675 4_3:+3735085 Msa0624930:CDS
TTTGTATGCAATTTCCAATT+CGG 0.377921 4_3:-3738966 None:intergenic
GGGTGGTGGGAGTGTGGGTG+CGG 0.381769 4_3:-3734899 None:intergenic
TTCTATTGAAGGAGTTGAAA+AGG 0.389406 4_3:+3738877 Msa0624930:CDS
GCATTGCCCGGAAGCTTGCC+AGG 0.390101 4_3:-3738725 None:intergenic
TCAAAATTCTCAGGGTGTCC+AGG 0.392747 4_3:-3736606 None:intergenic
AATGTTCTTCCCGGTCTGAT+TGG 0.393930 4_3:+3738393 Msa0624930:CDS
GGGTCATCCTGGTTTACCTA+TGG 0.396435 4_3:+3735070 Msa0624930:CDS
GGAACAATATACAAAGAGTT+TGG 0.397042 4_3:+3739214 Msa0624930:CDS
GGATGTGAGGCGCGTAAGAT+TGG 0.402805 4_3:-3734826 None:intergenic
AACTCCTTCAATAGAAGTTC+CGG 0.404053 4_3:-3738870 None:intergenic
AGAGCACCTGGCAAGCTTCC+GGG 0.404549 4_3:+3738719 Msa0624930:CDS
TGGCGATTTACCTGCTGGTT+GGG 0.404773 4_3:+3738162 Msa0624930:CDS
ATTGTCGGGCTTGTTAAATC+TGG 0.405666 4_3:-3736886 None:intergenic
ACACTGAACCAGTCCTCTTT+GGG 0.406577 4_3:+3734568 Msa0624930:five_prime_UTR
GCAGAGCGTAACGTTAGATT+TGG 0.407664 4_3:+3738489 Msa0624930:CDS
CATGTTATTTGGGTAAAGAA+TGG 0.408155 4_3:+3737209 Msa0624930:CDS
CCTGTTGTGACTTCAATTCC+AGG 0.410667 4_3:-3736633 None:intergenic
AGGTTTCGGGTTGCATCGGC+AGG 0.411643 4_3:-3738342 None:intergenic
GTTGGTGAGAGAGAGGGAAG+TGG 0.411984 4_3:-3734802 None:intergenic
ATTTGAAGCAATTTCGTCAA+TGG 0.412981 4_3:+3736571 Msa0624930:CDS
AGAGGGAGAGGGAGAGAGAA+GGG 0.413641 4_3:-3734616 None:intergenic
CTCCCACCCGAATGTTGATC+CGG 0.413707 4_3:-3739128 None:intergenic
TTAAACCAAAACGGATTCTT+GGG 0.415538 4_3:-3735143 None:intergenic
ATAATCCCAAGAATCCGTTT+TGG 0.418460 4_3:+3735138 Msa0624930:CDS
CTTGCAGGACACTGGGGACT+AGG 0.424166 4_3:+3737083 Msa0624930:CDS
CCCTACTGCTGTTACGGCTA+GGG 0.425285 4_3:+3739093 Msa0624930:CDS
GACATATATAACACCGGCTT+CGG 0.430122 4_3:-3738643 None:intergenic
AAGAGAGGCGCGTGGTGGAT+GGG 0.430849 4_3:-3734851 None:intergenic
TTTGAAGCAATTTCGTCAAT+GGG 0.431071 4_3:+3736572 Msa0624930:CDS
GATGTGAGGCGCGTAAGATT+GGG 0.432115 4_3:-3734825 None:intergenic
ATTGAGGCCGGATCAACATT+CGG 0.433032 4_3:+3739121 Msa0624930:CDS
AGAGAGGGAGAGAGAGGGAG+AGG 0.433073 4_3:-3734628 None:intergenic
TGGTTGGGAGAAAGCACTTC+CGG 0.437142 4_3:+3738177 Msa0624930:CDS
TCTAGAAAGGGCAAGGATAG+AGG 0.439993 4_3:-3738828 None:intergenic
TAAACCAGGATGACCCGAAT+TGG 0.441726 4_3:-3735063 None:intergenic
AGAGAGGCGCGTGGTGGATG+GGG 0.442811 4_3:-3734850 None:intergenic
AAGCTTGCCAGGTGCTCTAT+AGG 0.443449 4_3:-3738714 None:intergenic
GATGAGTCTGTGGTGGTTGA+GGG 0.444300 4_3:-3734981 None:intergenic
TATAACACCGGCTTCGGATA+GGG 0.445320 4_3:-3738637 None:intergenic
GGCACGTGGAAAGGCTCATA+TGG 0.445479 4_3:-3737921 None:intergenic
GACAATCACATTTCTATTGA+CGG 0.446265 4_3:+3737128 Msa0624930:CDS
TGCTGGATATGACAGTGTTC+AGG 0.446747 4_3:+3735229 Msa0624930:CDS
GAGAGGGAGAGGGAGAGAGA+AGG 0.447402 4_3:-3734617 None:intergenic
GGTCATCCTGGTTTACCTAT+GGG 0.448870 4_3:+3735071 Msa0624930:CDS
TTCGGGTGGGAGAAAATTGT+TGG 0.449505 4_3:+3739139 Msa0624930:CDS
AGATGAGTCTGTGGTGGTTG+AGG 0.451017 4_3:-3734982 None:intergenic
GAAAATGAGAGAAAATGAAA+AGG 0.452077 4_3:-3734724 None:intergenic
AATCTAACGTTACGCTCTGC+TGG 0.452620 4_3:-3738486 None:intergenic
GAGAGGGAGAGAGAGGGAGA+GGG 0.453091 4_3:-3734627 None:intergenic
ACTACATGCGTGGTGCCATT+AGG 0.453398 4_3:+3738607 Msa0624930:CDS
CCGAATCAACCGCGAGGAAA+CGG 0.453858 4_3:-3735031 None:intergenic
TCCCTACTGCTGTTACGGCT+AGG 0.455024 4_3:+3739092 Msa0624930:CDS
ATAGAAGTTCCGGCAAGGTT+AGG 0.455709 4_3:-3738860 None:intergenic
CAGCTAAGTGCTTCTCTGCA+AGG 0.457975 4_3:-3736863 None:intergenic
GGATGGCGGTGTGGCGAAGA+TGG 0.458269 4_3:-3734938 None:intergenic
ATATAACACCGGCTTCGGAT+AGG 0.459608 4_3:-3738638 None:intergenic
TGTTCTCCCTACTGCTGTTA+CGG 0.460415 4_3:+3739087 Msa0624930:CDS
TTGAGGCCGGATCAACATTC+GGG 0.463847 4_3:+3739122 Msa0624930:CDS
ATCGTCTCTGACAACTCAAC+AGG 0.465225 4_3:+3738908 Msa0624930:CDS
GATTGAGAGAGGTGGGTGGT+GGG 0.466182 4_3:-3734912 None:intergenic
TCTTTGTATATTGTTCCTGC+AGG 0.467549 4_3:-3739208 None:intergenic
TGCACTGCCGCCAATCAGAC+CGG 0.471254 4_3:-3738403 None:intergenic
GGTGCGGTTGAGGGTGATGG+TGG 0.471597 4_3:-3734883 None:intergenic
TGGCGGTGTGGCGAAGATGG+TGG 0.474169 4_3:-3734935 None:intergenic
GGCGGTGTGGCGAAGATGGT+GGG 0.476920 4_3:-3734934 None:intergenic
CCTATGGGTTGTGCTCCAAT+GGG 0.477027 4_3:+3735086 Msa0624930:CDS
ATTGGGTGATGGTTGTCAAA+TGG 0.477289 4_3:+3737034 Msa0624930:CDS
ATCAGTGGCGATTTACCTGC+TGG 0.477834 4_3:+3738157 Msa0624930:CDS
CTTGCTCACTTGCAGGACAC+TGG 0.478425 4_3:+3737075 Msa0624930:CDS
GATTGGGGTTGGTGAGAGAG+AGG 0.479684 4_3:-3734809 None:intergenic
CAGGGCATTGCCAATGCTGT+TGG 0.481434 4_3:+3736834 Msa0624930:CDS
GAAGAGAGGCGCGTGGTGGA+TGG 0.482024 4_3:-3734852 None:intergenic
GAGCAGCACCCTCACGGATG+TGG 0.483979 4_3:-3738057 None:intergenic
CTTGCCGGAACTTCTATTGA+AGG 0.488516 4_3:+3738866 Msa0624930:CDS
CAAAATTCTCAGGGTGTCCA+GGG 0.491690 4_3:-3736605 None:intergenic
TCTATTGAAGGAGTTGAAAA+GGG 0.494796 4_3:+3738878 Msa0624930:CDS
TTGCTCACTTGCAGGACACT+GGG 0.494803 4_3:+3737076 Msa0624930:CDS
GGTTGAGGGTGATGGTGGAT+GGG 0.495802 4_3:-3734878 None:intergenic
TCAAGATATTTGGCATTGCC+CGG 0.496204 4_3:-3738737 None:intergenic
TGAACAATCACAAGCTTACA+AGG 0.497028 4_3:+3739060 Msa0624930:CDS
GTTCCGATCAAAATGACATC+AGG 0.497616 4_3:-3738938 None:intergenic
AAAGCCAATTCGGGTCATCC+TGG 0.501100 4_3:+3735059 Msa0624930:CDS
TTGCAGGACACTGGGGACTA+GGG 0.502548 4_3:+3737084 Msa0624930:CDS
GATGCCACAAGAAACAATCT+TGG 0.505359 4_3:+3737894 Msa0624930:CDS
CCTGGAATTGAAGTCACAAC+AGG 0.506192 4_3:+3736633 Msa0624930:CDS
GTGGCGATTTACCTGCTGGT+TGG 0.506566 4_3:+3738161 Msa0624930:CDS
GTTCTTCCCGGTCTGATTGG+CGG 0.506753 4_3:+3738396 Msa0624930:CDS
GGATAGGGCGGAAAGCCTAA+TGG 0.509150 4_3:-3738622 None:intergenic
GCTCTGCTGGAGAATCACTT+TGG 0.513151 4_3:-3738473 None:intergenic
GAGGCGCGTGGTGGATGGGG+AGG 0.514640 4_3:-3734847 None:intergenic
ACATCCTCGGGCACGTGGAA+AGG 0.514742 4_3:-3737930 None:intergenic
CAGGAGTTTCAAAATTCTCA+GGG 0.514921 4_3:-3736614 None:intergenic
TGGTGTTAGAGAACATGGAA+TGG 0.515232 4_3:+3738509 Msa0624930:CDS
CCATCCAAGATTGTTTCTTG+TGG 0.515955 4_3:-3737898 None:intergenic
TCCATGCACACTGTAGGAGT+TGG 0.516035 4_3:-3737847 None:intergenic
GCTGATGGTAACGAAACAGC+TGG 0.517357 4_3:+3738770 Msa0624930:CDS
AAACTAACCTTGATCAATGT+GGG 0.518234 4_3:-3737293 None:intergenic
GCTGTTTCGTTACCATCAGC+GGG 0.518244 4_3:-3738767 None:intergenic
CGATAGGTTTCGGGTTGCAT+CGG 0.518470 4_3:-3738346 None:intergenic
AGATTTGGTGTTAGAGAACA+TGG 0.524137 4_3:+3738504 Msa0624930:CDS
GGTGAGGATCTAAGAAAAGA+AGG 0.525397 4_3:+3738992 Msa0624930:CDS
GGTGTTAGAGAACATGGAAT+GGG 0.527853 4_3:+3738510 Msa0624930:CDS
GGAAGCAAAGGAAAAGCAAT+CGG 0.531510 4_3:+3739160 Msa0624930:CDS
CTTGATGCTCCGCCCGCTGA+TGG 0.535746 4_3:+3738755 Msa0624930:CDS
ACCCTAGCCGTAACAGCAGT+AGG 0.537823 4_3:-3739094 None:intergenic
CAATGGGAGAGCAGAACCCC+TGG 0.538408 4_3:+3736588 Msa0624930:CDS
ATGATCGACGATCTCATTGT+CGG 0.538486 4_3:-3736901 None:intergenic
GGGTGATGGTTGTCAAATGG+AGG 0.538756 4_3:+3737037 Msa0624930:CDS
AGCTAAGTGCTTCTCTGCAA+GGG 0.538991 4_3:-3736862 None:intergenic
AGCTGTTTCGTTACCATCAG+CGG 0.539811 4_3:-3738768 None:intergenic
TGATCGACGATCTCATTGTC+GGG 0.540061 4_3:-3736900 None:intergenic
ATTGGGGTTGGTGAGAGAGA+GGG 0.541347 4_3:-3734808 None:intergenic
TGCAGAGACGGATGCATGGA+TGG 0.541846 4_3:-3734955 None:intergenic
TTTCCAGGTCCTCTTGGTCA+GGG 0.542477 4_3:+3736816 Msa0624930:intron
TTGGAAATTGCATACAAAGC+TGG 0.542667 4_3:+3738971 Msa0624930:CDS
CCACCAGCCTATAGAGCACC+TGG 0.545054 4_3:+3738707 Msa0624930:intron
GGTTGAGGGTGGTGCAGAGA+CGG 0.545965 4_3:-3734967 None:intergenic
TCCAACTCCTACAGTGTGCA+TGG 0.548707 4_3:+3737846 Msa0624930:CDS
CGATCACGGTTAAACCAAAA+CGG 0.549172 4_3:-3735152 None:intergenic
CTGATGGTAACGAAACAGCT+GGG 0.549365 4_3:+3738771 Msa0624930:CDS
TCATAAAGCACATGACCCAT+TGG 0.550537 4_3:-3735101 None:intergenic
AGTGCTTTCTCCCAACCAGC+AGG 0.552628 4_3:-3738172 None:intergenic
AGACAGACCCACATTGATCA+AGG 0.553564 4_3:+3737286 Msa0624930:CDS
GTGGGATTGAGAGAGGTGGG+TGG 0.558444 4_3:-3734916 None:intergenic
ATTGAAGGAGTTGAAAAGGG+TGG 0.558611 4_3:+3738881 Msa0624930:CDS
GAGAAAATTGTTGGAAGCAA+AGG 0.558787 4_3:+3739148 Msa0624930:CDS
CTTTCCGCCCTATCCGAAGC+CGG 0.562775 4_3:+3738630 Msa0624930:CDS
GATGGTGGGATTGAGAGAGG+TGG 0.564195 4_3:-3734920 None:intergenic
GCACTGCCGCCAATCAGACC+GGG 0.567223 4_3:-3738402 None:intergenic
CTAGAAAGGGCAAGGATAGA+GGG 0.568237 4_3:-3738827 None:intergenic
AAAACTAACCTTGATCAATG+TGG 0.568500 4_3:-3737294 None:intergenic
ATGGTGGGATTGAGAGAGGT+GGG 0.570521 4_3:-3734919 None:intergenic
GGCATCGCTCTTCACAGCCG+TGG 0.571825 4_3:+3738546 Msa0624930:CDS
TGGTGGATGGGGAGGATGTG+AGG 0.572558 4_3:-3734839 None:intergenic
AAAGGAGAAAGAGAAAGTGA+AGG 0.574240 4_3:-3734706 None:intergenic
TACGGCTAGGGTTAGCATTG+AGG 0.580836 4_3:+3739105 Msa0624930:CDS
GGTTGTCGCCCAAAGAGGAC+TGG 0.584007 4_3:-3734576 None:intergenic
TTTGGAGCTAGTGCTCCTGC+AGG 0.584179 4_3:+3739193 Msa0624930:CDS
AGGTATTGTATATTGGGTGA+TGG 0.586628 4_3:+3737023 Msa0624930:intron
AGTGTGCATGGAAGTGCACT+TGG 0.588131 4_3:+3737858 Msa0624930:CDS
CCCTAGCCGTAACAGCAGTA+GGG 0.588657 4_3:-3739093 None:intergenic
AAGGGCTAAACCAACAGCAT+TGG 0.589425 4_3:-3736844 None:intergenic
ATGTGAGGCGCGTAAGATTG+GGG 0.595709 4_3:-3734824 None:intergenic
GTTGAGGTTGTCGCCCAAAG+AGG 0.597888 4_3:-3734581 None:intergenic
TGGGTAAAGAATGGAAACAC+TGG 0.598152 4_3:+3737218 Msa0624930:CDS
GACCGGGAAGAACATTCGCA+AGG 0.598309 4_3:-3738386 None:intergenic
ACTGATGATAGATTTCAAAA+CGG 0.601423 4_3:-3738140 None:intergenic
GAAGATGGTGGGATTGAGAG+AGG 0.603956 4_3:-3734923 None:intergenic
CCACAAGAAACAATCTTGGA+TGG 0.609450 4_3:+3737898 Msa0624930:CDS
GGTGATGGTTGTCAAATGGA+GGG 0.610444 4_3:+3737038 Msa0624930:CDS
TGGAGTCGCCACATCCGTGA+GGG 0.615343 4_3:+3738049 Msa0624930:CDS
AGGCCGGATCAACATTCGGG+TGG 0.615366 4_3:+3739125 Msa0624930:CDS
GTGGTGCAGAGACGGATGCA+TGG 0.615405 4_3:-3734959 None:intergenic
AATGGCACCACGCATGTAGT+CGG 0.615519 4_3:-3738604 None:intergenic
CAGACAAAACAAACCGATCA+CGG 0.616101 4_3:-3735166 None:intergenic
TGAGCCTTTCCACGTGCCCG+AGG 0.617304 4_3:+3737926 Msa0624930:CDS
CACAGTATGGAATAAGTCCA+CGG 0.620236 4_3:-3738563 None:intergenic
ATTCAAGAGCAGCACCCTCA+CGG 0.624321 4_3:-3738063 None:intergenic
GCTAGGGTTAGCATTGAGGC+CGG 0.626913 4_3:+3739109 Msa0624930:CDS
ACCGGGAAGAACATTCGCAA+GGG 0.627406 4_3:-3738385 None:intergenic
TTGGCAATGCCCTGACCAAG+AGG 0.629391 4_3:-3736825 None:intergenic
GCACAACCCATAGGTAAACC+AGG 0.634013 4_3:-3735077 None:intergenic
GGATCTAAGAAAAGAAGGAA+AGG 0.637691 4_3:+3738997 Msa0624930:CDS
TGAATATGAAAAGAAGTACA+AGG 0.638110 4_3:+3738108 Msa0624930:CDS
GGCCGGATCAACATTCGGGT+GGG 0.638758 4_3:+3739126 Msa0624930:CDS
GAGTCTGTGGTGGTTGAGGG+TGG 0.639091 4_3:-3734978 None:intergenic
GGTTTCGGGTTGCATCGGCA+GGG 0.640091 4_3:-3738341 None:intergenic
AGCTGGGGCATACAAAGTTG+CGG 0.643142 4_3:+3738787 Msa0624930:CDS
TTGGAGTCGCCACATCCGTG+AGG 0.643540 4_3:+3738048 Msa0624930:CDS
GTGCTGCTCTTGAATCTGAG+TGG 0.643988 4_3:+3738071 Msa0624930:CDS
CCCATTGGAGCACAACCCAT+AGG 0.646724 4_3:-3735086 None:intergenic
GGAATGGGAGCAATCAGCAA+TGG 0.647795 4_3:+3738525 Msa0624930:CDS
AACACCGGCTTCGGATAGGG+CGG 0.647980 4_3:-3738634 None:intergenic
AATTGCATACAAAGCTGGTG+AGG 0.649789 4_3:+3738976 Msa0624930:CDS
GAGGCGCGTAAGATTGGGGT+TGG 0.650059 4_3:-3734820 None:intergenic
TGCTCACTTGCAGGACACTG+GGG 0.650590 4_3:+3737077 Msa0624930:CDS
CTTCAATAGAAGTTCCGGCA+AGG 0.650965 4_3:-3738865 None:intergenic
GAGAGAAGAGAGGCGCGTGG+TGG 0.652623 4_3:-3734856 None:intergenic
AAAATTCTCAGGGTGTCCAG+GGG 0.654764 4_3:-3736604 None:intergenic
TGGTGGATGGGAGAGAAGAG+AGG 0.660150 4_3:-3734866 None:intergenic
CAACACGATCCGTTTCCTCG+CGG 0.662318 4_3:+3735022 Msa0624930:CDS
TGGGAGAGAAGAGAGGCGCG+TGG 0.663504 4_3:-3734859 None:intergenic
CTCAACGAGAGATGAGTCTG+TGG 0.664640 4_3:-3734991 None:intergenic
GGGTCATGTGCTTTATGATG+AGG 0.665011 4_3:+3735106 Msa0624930:CDS
TGCACTTCCATGCACACTGT+AGG 0.666970 4_3:-3737853 None:intergenic
TGATGGTAACGAAACAGCTG+GGG 0.671680 4_3:+3738772 Msa0624930:CDS
CGGATGCATGGATGGCGGTG+TGG 0.677388 4_3:-3734947 None:intergenic
AACGAGAGATGAGTCTGTGG+TGG 0.691080 4_3:-3734988 None:intergenic
GTTTCGTTACCATCAGCGGG+CGG 0.694931 4_3:-3738764 None:intergenic
AGAGACGGATGCATGGATGG+CGG 0.734321 4_3:-3734952 None:intergenic
TTTCAACCGAATCAACCGCG+AGG 0.765803 4_3:-3735037 None:intergenic
ATATGAAAAGAAGTACAAGG+AGG 0.782536 4_3:+3738111 Msa0624930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTAAAACAATATTTATTT+TGG - chr4_3:3737402-3737421 None:intergenic 10.0%
!!! TATTTTCTATTTTCATGATT+AGG + chr4_3:3736712-3736731 Msa0624930:intron 15.0%
!!! TTTTTAATAATCTTTACATG+TGG + chr4_3:3738224-3738243 Msa0624930:intron 15.0%
!! TAACACACAAAAAATTATCT+GGG + chr4_3:3735252-3735271 Msa0624930:intron 20.0%
!!! TTTGAGAATTTTTGTTGTTT+TGG + chr4_3:3735327-3735346 Msa0624930:intron 20.0%
!!! TTTTTGTTGTTTTGGTTTTT+TGG + chr4_3:3735335-3735354 Msa0624930:intron 20.0%
!!! ATTTTAGATTGAATTTGTGT+CGG + chr4_3:3735806-3735825 Msa0624930:intron 20.0%
!!! GAAACATTATTTCTTAAAGT+AGG - chr4_3:3736172-3736191 None:intergenic 20.0%
!!! TGTTTTTGATCTTTGATTTA+TGG + chr4_3:3736453-3736472 Msa0624930:intron 20.0%
!!! GTTTTTGATCTTTGATTTAT+GGG + chr4_3:3736454-3736473 Msa0624930:intron 20.0%
!!! TATTTATTTGCCTTTTCTTT+TGG + chr4_3:3736488-3736507 Msa0624930:intron 20.0%
!!! TTTGTTTTGGTTTGAATTTT+AGG + chr4_3:3736542-3736561 Msa0624930:intron 20.0%
!! ACTAAAATGAAACTCATAAA+AGG - chr4_3:3736685-3736704 None:intergenic 20.0%
!!! TTTCTATAGGTATTGTATAT+TGG + chr4_3:3737016-3737035 Msa0624930:intron 20.0%
!!! TTCTATAGGTATTGTATATT+GGG + chr4_3:3737017-3737036 Msa0624930:intron 20.0%
!!! AATATTTATTTTGGAACTGA+GGG - chr4_3:3737393-3737412 None:intergenic 20.0%
!! CATTAATTTAGGAGTAAAAT+TGG - chr4_3:3737469-3737488 None:intergenic 20.0%
!! TTCAGTAAAATAAATCACAT+TGG - chr4_3:3737657-3737676 None:intergenic 20.0%
!!! ATCATTTTGATTTTGCAGTT+TGG - chr4_3:3734676-3734695 None:intergenic 25.0%
! GAAAATGAGAGAAAATGAAA+AGG - chr4_3:3734727-3734746 None:intergenic 25.0%
! GTAACACACAAAAAATTATC+TGG + chr4_3:3735251-3735270 Msa0624930:intron 25.0%
!! TTTTAGATTGAATTTGTGTC+GGG + chr4_3:3735807-3735826 Msa0624930:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr4_3:3735967-3735986 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr4_3:3735966-3735985 Msa0624930:intron 25.0%
!! AAATAATGTTTCTGTTGTTG+TGG + chr4_3:3736180-3736199 Msa0624930:intron 25.0%
!! AATAATGTTTCTGTTGTTGT+GGG + chr4_3:3736181-3736200 Msa0624930:intron 25.0%
!! TTACTCTTTTTAACACTCAA+TGG + chr4_3:3736322-3736341 Msa0624930:intron 25.0%
!! TATGAAAAGAGTGTAGTATT+AGG + chr4_3:3736423-3736442 Msa0624930:intron 25.0%
!!! GAAGTGTTGTTATTTTGTTT+TGG + chr4_3:3736529-3736548 Msa0624930:intron 25.0%
! TTTGTTTCATGTAGTCTATT+TGG + chr4_3:3736756-3736775 Msa0624930:intron 25.0%
!!! TTACGATACTTGTTTTCTAT+AGG + chr4_3:3737003-3737022 Msa0624930:intron 25.0%
!!! TGATCAAGGTTAGTTTTAAA+CGG + chr4_3:3737300-3737319 Msa0624930:intron 25.0%
!!! CAATATTTATTTTGGAACTG+AGG - chr4_3:3737394-3737413 None:intergenic 25.0%
! AAGTTTCATATTAATCAGTG+TGG - chr4_3:3737999-3738018 None:intergenic 25.0%
!! TGAATATGAAAAGAAGTACA+AGG + chr4_3:3738108-3738127 Msa0624930:CDS 25.0%
! ACTGATGATAGATTTCAAAA+CGG - chr4_3:3738143-3738162 None:intergenic 25.0%
!!! TTTTTTTGGAATTTACTCAC+CGG - chr4_3:3738199-3738218 None:intergenic 25.0%
! TTTGTATGCAATTTCCAATT+CGG - chr4_3:3738969-3738988 None:intergenic 25.0%
!!! TTTTGATTTTGCAGTTTGGT+TGG - chr4_3:3734672-3734691 None:intergenic 30.0%
! TTAAACCAAAACGGATTCTT+GGG - chr4_3:3735146-3735165 None:intergenic 30.0%
ACACAAAAAATTATCTGGGT+CGG + chr4_3:3735256-3735275 Msa0624930:intron 30.0%
!! GGTTGATTTGTTGAAAAGTT+TGG + chr4_3:3735278-3735297 Msa0624930:intron 30.0%
GACATGTATATATGTTGTGT+GGG - chr4_3:3735415-3735434 None:intergenic 30.0%
TGACATGTATATATGTTGTG+TGG - chr4_3:3735416-3735435 None:intergenic 30.0%
AAGAAGTAAACTTGATCAGA+CGG - chr4_3:3735636-3735655 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr4_3:3735941-3735960 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr4_3:3736036-3736055 None:intergenic 30.0%
!! ACTAGTTTCATTGTTTTGTC+TGG + chr4_3:3736095-3736114 Msa0624930:intron 30.0%
! TGGTGTCTGTGTTTTATATT+TGG + chr4_3:3736115-3736134 Msa0624930:intron 30.0%
! AATATTGACCTTTTAAGCGA+TGG + chr4_3:3736387-3736406 Msa0624930:intron 30.0%
! ATCTTTGATTTATGGGAACT+TGG + chr4_3:3736461-3736480 Msa0624930:intron 30.0%
! TCTTTGATTTATGGGAACTT+GGG + chr4_3:3736462-3736481 Msa0624930:intron 30.0%
GTTAACAAGTCCAAAAGAAA+AGG - chr4_3:3736501-3736520 None:intergenic 30.0%
AATAACAACACTTCAGTCTA+TGG - chr4_3:3736523-3736542 None:intergenic 30.0%
! ATTTGAAGCAATTTCGTCAA+TGG + chr4_3:3736571-3736590 Msa0624930:CDS 30.0%
! TTTGAAGCAATTTCGTCAAT+GGG + chr4_3:3736572-3736591 Msa0624930:CDS 30.0%
ATGATTAGGACATTATGACT+TGG + chr4_3:3736726-3736745 Msa0624930:intron 30.0%
! TCTTTTCTTGCAAATTTTCC+AGG + chr4_3:3736801-3736820 Msa0624930:intron 30.0%
AAATGGAGAAATACAAGAGT+CGG - chr4_3:3736941-3736960 None:intergenic 30.0%
TTATGTTAGAGAAGAGGAAA+TGG - chr4_3:3736958-3736977 None:intergenic 30.0%
TTTCCTCTTCTCTAACATAA+CGG + chr4_3:3736958-3736977 Msa0624930:intron 30.0%
! AACAAGTATCGTAAGCAAAA+CGG - chr4_3:3736997-3737016 None:intergenic 30.0%
GACAATCACATTTCTATTGA+CGG + chr4_3:3737128-3737147 Msa0624930:CDS 30.0%
!! AGTGTTGAAAAACGTTTTGA+GGG + chr4_3:3737176-3737195 Msa0624930:CDS 30.0%
! CATGTTATTTGGGTAAAGAA+TGG + chr4_3:3737209-3737228 Msa0624930:CDS 30.0%
AAACTAACCTTGATCAATGT+GGG - chr4_3:3737296-3737315 None:intergenic 30.0%
AAAACTAACCTTGATCAATG+TGG - chr4_3:3737297-3737316 None:intergenic 30.0%
GTATAATCACATCAACATGT+TGG - chr4_3:3737369-3737388 None:intergenic 30.0%
! CCAAAAAAAAGTGCAGTTTA+AGG - chr4_3:3737608-3737627 None:intergenic 30.0%
!!! CCTTAAACTGCACTTTTTTT+TGG + chr4_3:3737605-3737624 Msa0624930:intron 30.0%
TTTAATTAAGTGCAGTCTGT+TGG + chr4_3:3737759-3737778 Msa0624930:intron 30.0%
! TTCACAACAACTATTGGTTA+TGG + chr4_3:3737810-3737829 Msa0624930:CDS 30.0%
!!! AGAATTGCTTTTTTGTTTGC+AGG + chr4_3:3738023-3738042 Msa0624930:intron 30.0%
! CTTTTCATATTCAGCAAACT+TGG - chr4_3:3738101-3738120 None:intergenic 30.0%
! ATATGAAAAGAAGTACAAGG+AGG + chr4_3:3738111-3738130 Msa0624930:CDS 30.0%
!!! GTTTTGAAATCTATCATCAG+TGG + chr4_3:3738142-3738161 Msa0624930:CDS 30.0%
CATCAGATTCTTGATCAATT+TGG - chr4_3:3738262-3738281 None:intergenic 30.0%
! AGTCTGAAATCAAATTGGAA+CGG - chr4_3:3738307-3738326 None:intergenic 30.0%
! GTGTAAGTCTGAAATCAAAT+TGG - chr4_3:3738312-3738331 None:intergenic 30.0%
AGTCATGACATATATAACAC+CGG - chr4_3:3738652-3738671 None:intergenic 30.0%
! AGGCAATTTTTGTCTAGAAA+GGG - chr4_3:3738843-3738862 None:intergenic 30.0%
! TAGGCAATTTTTGTCTAGAA+AGG - chr4_3:3738844-3738863 None:intergenic 30.0%
TTCTATTGAAGGAGTTGAAA+AGG + chr4_3:3738877-3738896 Msa0624930:CDS 30.0%
TCTATTGAAGGAGTTGAAAA+GGG + chr4_3:3738878-3738897 Msa0624930:CDS 30.0%
!!! AAACCTGATGTCATTTTGAT+CGG + chr4_3:3738935-3738954 Msa0624930:CDS 30.0%
! AGTTGTTTCCTTTGTTTCTT+GGG + chr4_3:3739027-3739046 Msa0624930:CDS 30.0%
AAAAAGTTCCCAAGAAACAA+AGG - chr4_3:3739038-3739057 None:intergenic 30.0%
GGAACAATATACAAAGAGTT+TGG + chr4_3:3739214-3739233 Msa0624930:CDS 30.0%
!!! AGGGAGATTTGTTTTTGTTG+AGG - chr4_3:3734600-3734619 None:intergenic 35.0%
AAAGGAGAAAGAGAAAGTGA+AGG - chr4_3:3734709-3734728 None:intergenic 35.0%
TTCGGTTGAAAAAGCCAATT+CGG + chr4_3:3735049-3735068 Msa0624930:CDS 35.0%
! ATAATCCCAAGAATCCGTTT+TGG + chr4_3:3735138-3735157 Msa0624930:CDS 35.0%
! GTTAAACCAAAACGGATTCT+TGG - chr4_3:3735147-3735166 None:intergenic 35.0%
CACAAAAAATTATCTGGGTC+GGG + chr4_3:3735257-3735276 Msa0624930:intron 35.0%
GATACAAACTGACACAAACA+TGG - chr4_3:3735497-3735516 None:intergenic 35.0%
AAGCACTAATGACACAAACA+TGG - chr4_3:3735526-3735545 None:intergenic 35.0%
! TTGTGTCATTAGTGCTTCAT+AGG + chr4_3:3735529-3735548 Msa0624930:intron 35.0%
TGTGATTTGATGTGACTGTT+TGG + chr4_3:3735553-3735572 Msa0624930:intron 35.0%
GTGATTTGATGTGACTGTTT+GGG + chr4_3:3735554-3735573 Msa0624930:intron 35.0%
TATGAATCGTCCAATCTTGA+CGG + chr4_3:3735685-3735704 Msa0624930:intron 35.0%
ACTGACACATGTATTTGCAT+AGG + chr4_3:3735880-3735899 Msa0624930:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr4_3:3736031-3736050 Msa0624930:intron 35.0%
TTTCTGTTGTTGTGGGTAAT+GGG + chr4_3:3736188-3736207 Msa0624930:intron 35.0%
ACAGAACTCAAGAATATGCA+AGG - chr4_3:3736231-3736250 None:intergenic 35.0%
CAGGAGTTTCAAAATTCTCA+GGG - chr4_3:3736617-3736636 None:intergenic 35.0%
! ACAACAGGTTGGATACAATT+TGG + chr4_3:3736648-3736667 Msa0624930:intron 35.0%
! AGGTATTGTATATTGGGTGA+TGG + chr4_3:3737023-3737042 Msa0624930:intron 35.0%
!!! GAGTGTTGAAAAACGTTTTG+AGG + chr4_3:3737175-3737194 Msa0624930:CDS 35.0%
!!! AAAAACGTTTTGAGGGACTT+GGG + chr4_3:3737183-3737202 Msa0624930:CDS 35.0%
GACGCACACATCATTAATTT+AGG - chr4_3:3737480-3737499 None:intergenic 35.0%
TCACTATATCCCACTATGTA+TGG + chr4_3:3737509-3737528 Msa0624930:intron 35.0%
ATTCACTTGCCATACATAGT+GGG - chr4_3:3737521-3737540 None:intergenic 35.0%
TATTCACTTGCCATACATAG+TGG - chr4_3:3737522-3737541 None:intergenic 35.0%
CTATGTATGGCAAGTGAATA+AGG + chr4_3:3737522-3737541 Msa0624930:intron 35.0%
!!! TGCACTTTTTTTTGGAACTG+AGG + chr4_3:3737613-3737632 Msa0624930:intron 35.0%
!!! GCACTTTTTTTTGGAACTGA+GGG + chr4_3:3737614-3737633 Msa0624930:intron 35.0%
!! TATTTAGCTTTCAGCTTCTC+AGG - chr4_3:3737696-3737715 None:intergenic 35.0%
CTGCACTTAATTAAACTGCT+AGG - chr4_3:3737754-3737773 None:intergenic 35.0%
CTGTAGGAGTTGGATTTATT+CGG - chr4_3:3737840-3737859 None:intergenic 35.0%
!! TCCATACTTTTTGACATCCT+CGG - chr4_3:3737946-3737965 None:intergenic 35.0%
!!! CTTTTTCAGCAAGGTCATAT+TGG - chr4_3:3738442-3738461 None:intergenic 35.0%
ATGACCTTGCTGAAAAAGTT+TGG + chr4_3:3738444-3738463 Msa0624930:CDS 35.0%
!!! ATCACCAAACTTTTTCAGCA+AGG - chr4_3:3738451-3738470 None:intergenic 35.0%
!! AGATTTGGTGTTAGAGAACA+TGG + chr4_3:3738504-3738523 Msa0624930:CDS 35.0%
ACAAAAAAGGTTGCACAGTA+TGG - chr4_3:3738579-3738598 None:intergenic 35.0%
GTAGTCGGTGAAAACAAAAA+AGG - chr4_3:3738592-3738611 None:intergenic 35.0%
! ATTTTTGTCTAGAAAGGGCA+AGG - chr4_3:3738838-3738857 None:intergenic 35.0%
AACTCCTTCAATAGAAGTTC+CGG - chr4_3:3738873-3738892 None:intergenic 35.0%
TTGGAAATTGCATACAAAGC+TGG + chr4_3:3738971-3738990 Msa0624930:CDS 35.0%
GGATCTAAGAAAAGAAGGAA+AGG + chr4_3:3738997-3739016 Msa0624930:CDS 35.0%
! GAGTTGTTTCCTTTGTTTCT+TGG + chr4_3:3739026-3739045 Msa0624930:CDS 35.0%
TGAACAATCACAAGCTTACA+AGG + chr4_3:3739060-3739079 Msa0624930:CDS 35.0%
GAGAAAATTGTTGGAAGCAA+AGG + chr4_3:3739148-3739167 Msa0624930:CDS 35.0%
TCTTTGTATATTGTTCCTGC+AGG - chr4_3:3739211-3739230 None:intergenic 35.0%
!!! AGTTTGGTTGGTTTTGTAGG+GGG - chr4_3:3734660-3734679 None:intergenic 40.0%
!!! CAGTTTGGTTGGTTTTGTAG+GGG - chr4_3:3734661-3734680 None:intergenic 40.0%
!!! GCAGTTTGGTTGGTTTTGTA+GGG - chr4_3:3734662-3734681 None:intergenic 40.0%
!!! TGCAGTTTGGTTGGTTTTGT+AGG - chr4_3:3734663-3734682 None:intergenic 40.0%
TCGGTTGAAAAAGCCAATTC+GGG + chr4_3:3735050-3735069 Msa0624930:CDS 40.0%
TCATAAAGCACATGACCCAT+TGG - chr4_3:3735104-3735123 None:intergenic 40.0%
CGATCACGGTTAAACCAAAA+CGG - chr4_3:3735155-3735174 None:intergenic 40.0%
!!! CGTTTTGGTTTAACCGTGAT+CGG + chr4_3:3735153-3735172 Msa0624930:CDS 40.0%
CAGACAAAACAAACCGATCA+CGG - chr4_3:3735169-3735188 None:intergenic 40.0%
!!! TTTGTTTTGTCTGCTGGTCA+TGG + chr4_3:3735176-3735195 Msa0624930:CDS 40.0%
TATGCTTTGCTTCATCTTGC+TGG + chr4_3:3735212-3735231 Msa0624930:CDS 40.0%
! TGATGTGACTGTTTGGGTTT+AGG + chr4_3:3735560-3735579 Msa0624930:intron 40.0%
! ACTGTTTGGGTTTAGGAGAT+TGG + chr4_3:3735567-3735586 Msa0624930:intron 40.0%
TGTCAAAGTGATCAGGCATT+TGG + chr4_3:3735599-3735618 Msa0624930:intron 40.0%
GTCAAAGTGATCAGGCATTT+GGG + chr4_3:3735600-3735619 Msa0624930:intron 40.0%
!! AAAAGGTGTCTATGTCGTCT+TGG - chr4_3:3735851-3735870 None:intergenic 40.0%
GTTTCTGTTGTTGTGGGTAA+TGG + chr4_3:3736187-3736206 Msa0624930:intron 40.0%
! ACCTTTTAAGCGATGGTTAG+TGG + chr4_3:3736394-3736413 Msa0624930:intron 40.0%
! CCTTTTAAGCGATGGTTAGT+GGG + chr4_3:3736395-3736414 Msa0624930:intron 40.0%
CCAGGAGTTTCAAAATTCTC+AGG - chr4_3:3736618-3736637 None:intergenic 40.0%
!!! CCTGAGAATTTTGAAACTCC+TGG + chr4_3:3736615-3736634 Msa0624930:CDS 40.0%
GAATTGAAGTCACAACAGGT+TGG + chr4_3:3736637-3736656 Msa0624930:intron 40.0%
!! ATTGTCGGGCTTGTTAAATC+TGG - chr4_3:3736889-3736908 None:intergenic 40.0%
ATGATCGACGATCTCATTGT+CGG - chr4_3:3736904-3736923 None:intergenic 40.0%
AGCAAAACGGCATACAACTA+AGG - chr4_3:3736984-3737003 None:intergenic 40.0%
! ATTGGGTGATGGTTGTCAAA+TGG + chr4_3:3737034-3737053 Msa0624930:CDS 40.0%
!!! GAAAAACGTTTTGAGGGACT+TGG + chr4_3:3737182-3737201 Msa0624930:CDS 40.0%
! ACTTGGGTGGCATGTTATTT+GGG + chr4_3:3737199-3737218 Msa0624930:CDS 40.0%
TGGGTAAAGAATGGAAACAC+TGG + chr4_3:3737218-3737237 Msa0624930:CDS 40.0%
TGAAATTCGTGCTGCCATTA+AGG + chr4_3:3737247-3737266 Msa0624930:CDS 40.0%
! GACAGCTTTTGCTTCCTTAA+TGG - chr4_3:3737264-3737283 None:intergenic 40.0%
AGTTGTTGTGAACTGCGAAA+TGG - chr4_3:3737802-3737821 None:intergenic 40.0%
TCGCAGTTCACAACAACTAT+TGG + chr4_3:3737804-3737823 Msa0624930:intron 40.0%
TCTTGTGGCATCAACTTCTT+TGG - chr4_3:3737886-3737905 None:intergenic 40.0%
GATGCCACAAGAAACAATCT+TGG + chr4_3:3737894-3737913 Msa0624930:CDS 40.0%
! CCATCCAAGATTGTTTCTTG+TGG - chr4_3:3737901-3737920 None:intergenic 40.0%
CCACAAGAAACAATCTTGGA+TGG + chr4_3:3737898-3737917 Msa0624930:CDS 40.0%
!! CCATACTTTTTGACATCCTC+GGG - chr4_3:3737945-3737964 None:intergenic 40.0%
!!! GCTTTTTTGTTTGCAGGCAT+TGG + chr4_3:3738029-3738048 Msa0624930:intron 40.0%
! CATTAAGGTTTTGCTGCGAT+AGG - chr4_3:3738365-3738384 None:intergenic 40.0%
! TGGTGTTAGAGAACATGGAA+TGG + chr4_3:3738509-3738528 Msa0624930:CDS 40.0%
GGTGTTAGAGAACATGGAAT+GGG + chr4_3:3738510-3738529 Msa0624930:CDS 40.0%
CACAGTATGGAATAAGTCCA+CGG - chr4_3:3738566-3738585 None:intergenic 40.0%
!! GACATATATAACACCGGCTT+CGG - chr4_3:3738646-3738665 None:intergenic 40.0%
GTCATGACTCACGATTCAAT+AGG + chr4_3:3738663-3738682 Msa0624930:intron 40.0%
ACTCACGATTCAATAGGACT+TGG + chr4_3:3738669-3738688 Msa0624930:intron 40.0%
TCAAGATATTTGGCATTGCC+CGG - chr4_3:3738740-3738759 None:intergenic 40.0%
CAAAAATTGCCTAACCTTGC+CGG + chr4_3:3738851-3738870 Msa0624930:CDS 40.0%
ATTGAAGGAGTTGAAAAGGG+TGG + chr4_3:3738881-3738900 Msa0624930:CDS 40.0%
GTTCCGATCAAAATGACATC+AGG - chr4_3:3738941-3738960 None:intergenic 40.0%
!!! GATGTCATTTTGATCGGAAC+CGG + chr4_3:3738941-3738960 Msa0624930:CDS 40.0%
TGCAATTTCCAATTCGGAAC+CGG - chr4_3:3738963-3738982 None:intergenic 40.0%
AATTGCATACAAAGCTGGTG+AGG + chr4_3:3738976-3738995 Msa0624930:CDS 40.0%
GGTGAGGATCTAAGAAAAGA+AGG + chr4_3:3738992-3739011 Msa0624930:CDS 40.0%
GGAAGCAAAGGAAAAGCAAT+CGG + chr4_3:3739160-3739179 Msa0624930:CDS 40.0%
TACACTGAACCAGTCCTCTT+TGG + chr4_3:3734567-3734586 Msa0624930:five_prime_UTR 45.0%
ACACTGAACCAGTCCTCTTT+GGG + chr4_3:3734568-3734587 Msa0624930:five_prime_UTR 45.0%
!!! TTTGGTTGGTTTTGTAGGGG+GGG - chr4_3:3734658-3734677 None:intergenic 45.0%
!!! GTTTGGTTGGTTTTGTAGGG+GGG - chr4_3:3734659-3734678 None:intergenic 45.0%
TAAACCAGGATGACCCGAAT+TGG - chr4_3:3735066-3735085 None:intergenic 45.0%
GGTCATCCTGGTTTACCTAT+GGG + chr4_3:3735071-3735090 Msa0624930:CDS 45.0%
GGGTCATGTGCTTTATGATG+AGG + chr4_3:3735106-3735125 Msa0624930:CDS 45.0%
!!! GATCGGTTTGTTTTGTCTGC+TGG + chr4_3:3735170-3735189 Msa0624930:CDS 45.0%
TGCTGGATATGACAGTGTTC+AGG + chr4_3:3735229-3735248 Msa0624930:CDS 45.0%
TCTCCACTGTCAAAGTGATC+AGG + chr4_3:3735592-3735611 Msa0624930:intron 45.0%
ATGCCTGATCACTTTGACAG+TGG - chr4_3:3735598-3735617 None:intergenic 45.0%
! TGATCAGGCATTTGGGACAT+TGG + chr4_3:3735607-3735626 Msa0624930:intron 45.0%
ATCGTCCAATCTTGACGGAA+CGG + chr4_3:3735690-3735709 Msa0624930:intron 45.0%
ACGGCTACTAATGTCACGAT+AGG + chr4_3:3735709-3735728 Msa0624930:intron 45.0%
ACTACCAGAACCCAAAGATC+AGG - chr4_3:3735757-3735776 None:intergenic 45.0%
! TGATCTTTGGGTTCTGGTAG+TGG + chr4_3:3735756-3735775 Msa0624930:intron 45.0%
! GATCTTTGGGTTCTGGTAGT+GGG + chr4_3:3735757-3735776 Msa0624930:intron 45.0%
GTGTCGGGTATGACACATAT+TGG + chr4_3:3735822-3735841 Msa0624930:intron 45.0%
! GTGTCAGTGTCGAACACAAA+AGG - chr4_3:3735868-3735887 None:intergenic 45.0%
CCCACTAACCATCGCTTAAA+AGG - chr4_3:3736398-3736417 None:intergenic 45.0%
! AAAATTCTCAGGGTGTCCAG+GGG - chr4_3:3736607-3736626 None:intergenic 45.0%
! CAAAATTCTCAGGGTGTCCA+GGG - chr4_3:3736608-3736627 None:intergenic 45.0%
! TCAAAATTCTCAGGGTGTCC+AGG - chr4_3:3736609-3736628 None:intergenic 45.0%
CCTGTTGTGACTTCAATTCC+AGG - chr4_3:3736636-3736655 None:intergenic 45.0%
CCTGGAATTGAAGTCACAAC+AGG + chr4_3:3736633-3736652 Msa0624930:CDS 45.0%
! GCAAATTTTCCAGGTCCTCT+TGG + chr4_3:3736810-3736829 Msa0624930:intron 45.0%
AAGGGCTAAACCAACAGCAT+TGG - chr4_3:3736847-3736866 None:intergenic 45.0%
AGCTAAGTGCTTCTCTGCAA+GGG - chr4_3:3736865-3736884 None:intergenic 45.0%
TGATCGACGATCTCATTGTC+GGG - chr4_3:3736903-3736922 None:intergenic 45.0%
AGGCCGTTATGTTAGAGAAG+AGG - chr4_3:3736964-3736983 None:intergenic 45.0%
! GGTGATGGTTGTCAAATGGA+GGG + chr4_3:3737038-3737057 Msa0624930:CDS 45.0%
! AATGAAGCTTGCTCACTTGC+AGG + chr4_3:3737068-3737087 Msa0624930:CDS 45.0%
ACTCTCAGTGAACGCGATTT+CGG - chr4_3:3737159-3737178 None:intergenic 45.0%
GACTTGGGTGGCATGTTATT+TGG + chr4_3:3737198-3737217 Msa0624930:CDS 45.0%
AGACAGACCCACATTGATCA+AGG + chr4_3:3737286-3737305 Msa0624930:CDS 45.0%
CCCGAGGATGTCAAAAAGTA+TGG + chr4_3:3737942-3737961 Msa0624930:intron 45.0%
! GTTTTGCTGCGATAGGTTTC+GGG - chr4_3:3738358-3738377 None:intergenic 45.0%
! GGTTTTGCTGCGATAGGTTT+CGG - chr4_3:3738359-3738378 None:intergenic 45.0%
!! GAACATTCGCAAGGGCATTA+AGG - chr4_3:3738380-3738399 None:intergenic 45.0%
AATGTTCTTCCCGGTCTGAT+TGG + chr4_3:3738393-3738412 Msa0624930:CDS 45.0%
AATCTAACGTTACGCTCTGC+TGG - chr4_3:3738489-3738508 None:intergenic 45.0%
GCAGAGCGTAACGTTAGATT+TGG + chr4_3:3738489-3738508 Msa0624930:CDS 45.0%
!! TATAACACCGGCTTCGGATA+GGG - chr4_3:3738640-3738659 None:intergenic 45.0%
!! ATATAACACCGGCTTCGGAT+AGG - chr4_3:3738641-3738660 None:intergenic 45.0%
CGATTCAATAGGACTTGGAG+AGG + chr4_3:3738674-3738693 Msa0624930:intron 45.0%
TCAATAGGACTTGGAGAGGA+TGG + chr4_3:3738678-3738697 Msa0624930:intron 45.0%
! AGCTGTTTCGTTACCATCAG+CGG - chr4_3:3738771-3738790 None:intergenic 45.0%
! CTGATGGTAACGAAACAGCT+GGG + chr4_3:3738771-3738790 Msa0624930:CDS 45.0%
! TGATGGTAACGAAACAGCTG+GGG + chr4_3:3738772-3738791 Msa0624930:CDS 45.0%
ACAAAGTTGCGGTGCTTAAC+AGG + chr4_3:3738798-3738817 Msa0624930:CDS 45.0%
CTAGAAAGGGCAAGGATAGA+GGG - chr4_3:3738830-3738849 None:intergenic 45.0%
TCTAGAAAGGGCAAGGATAG+AGG - chr4_3:3738831-3738850 None:intergenic 45.0%
ATAGAAGTTCCGGCAAGGTT+AGG - chr4_3:3738863-3738882 None:intergenic 45.0%
CTTCAATAGAAGTTCCGGCA+AGG - chr4_3:3738868-3738887 None:intergenic 45.0%
CTTGCCGGAACTTCTATTGA+AGG + chr4_3:3738866-3738885 Msa0624930:CDS 45.0%
ATCGTCTCTGACAACTCAAC+AGG + chr4_3:3738908-3738927 Msa0624930:CDS 45.0%
TGTTCTCCCTACTGCTGTTA+CGG + chr4_3:3739087-3739106 Msa0624930:CDS 45.0%
ATTGAGGCCGGATCAACATT+CGG + chr4_3:3739121-3739140 Msa0624930:CDS 45.0%
TTCGGGTGGGAGAAAATTGT+TGG + chr4_3:3739139-3739158 Msa0624930:CDS 45.0%
!!! GCAATCGGCATTGATCGTTT+TGG + chr4_3:3739175-3739194 Msa0624930:CDS 45.0%
!! AATAAATTAATTTATTTAAC+AGG - chr4_3:3736360-3736379 None:intergenic 5.0%
!!! TATTAAAAAAGATTTTTTTT+TGG - chr4_3:3738213-3738232 None:intergenic 5.0%
!! ATTGGGGTTGGTGAGAGAGA+GGG - chr4_3:3734811-3734830 None:intergenic 50.0%
ATGTGAGGCGCGTAAGATTG+GGG - chr4_3:3734827-3734846 None:intergenic 50.0%
GATGTGAGGCGCGTAAGATT+GGG - chr4_3:3734828-3734847 None:intergenic 50.0%
! ATGGTGGGATTGAGAGAGGT+GGG - chr4_3:3734922-3734941 None:intergenic 50.0%
!! GAAGATGGTGGGATTGAGAG+AGG - chr4_3:3734926-3734945 None:intergenic 50.0%
GATGAGTCTGTGGTGGTTGA+GGG - chr4_3:3734984-3735003 None:intergenic 50.0%
AGATGAGTCTGTGGTGGTTG+AGG - chr4_3:3734985-3735004 None:intergenic 50.0%
AACGAGAGATGAGTCTGTGG+TGG - chr4_3:3734991-3735010 None:intergenic 50.0%
CTCAACGAGAGATGAGTCTG+TGG - chr4_3:3734994-3735013 None:intergenic 50.0%
TTTCAACCGAATCAACCGCG+AGG - chr4_3:3735040-3735059 None:intergenic 50.0%
AAAGCCAATTCGGGTCATCC+TGG + chr4_3:3735059-3735078 Msa0624930:CDS 50.0%
GGGTCATCCTGGTTTACCTA+TGG + chr4_3:3735070-3735089 Msa0624930:CDS 50.0%
GCACAACCCATAGGTAAACC+AGG - chr4_3:3735080-3735099 None:intergenic 50.0%
! ACCTATGGGTTGTGCTCCAA+TGG + chr4_3:3735085-3735104 Msa0624930:CDS 50.0%
! CCTATGGGTTGTGCTCCAAT+GGG + chr4_3:3735086-3735105 Msa0624930:CDS 50.0%
AGTAGCCGTTCCGTCAAGAT+TGG - chr4_3:3735698-3735717 None:intergenic 50.0%
ACGATAGGAAGTCTGACTGC+CGG + chr4_3:3735724-3735743 Msa0624930:intron 50.0%
ACCAGAACCCAAAGATCAGG+TGG - chr4_3:3735754-3735773 None:intergenic 50.0%
! TTTTCCAGGTCCTCTTGGTC+AGG + chr4_3:3736815-3736834 Msa0624930:intron 50.0%
TTTCCAGGTCCTCTTGGTCA+GGG + chr4_3:3736816-3736835 Msa0624930:intron 50.0%
CAGCTAAGTGCTTCTCTGCA+AGG - chr4_3:3736866-3736885 None:intergenic 50.0%
! GGGTGATGGTTGTCAAATGG+AGG + chr4_3:3737037-3737056 Msa0624930:CDS 50.0%
TTGCTCACTTGCAGGACACT+GGG + chr4_3:3737076-3737095 Msa0624930:CDS 50.0%
!!! AACGTTTTGAGGGACTTGGG+TGG + chr4_3:3737186-3737205 Msa0624930:CDS 50.0%
TCCAACTCCTACAGTGTGCA+TGG + chr4_3:3737846-3737865 Msa0624930:CDS 50.0%
TCCATGCACACTGTAGGAGT+TGG - chr4_3:3737850-3737869 None:intergenic 50.0%
TGCACTTCCATGCACACTGT+AGG - chr4_3:3737856-3737875 None:intergenic 50.0%
! AGTGTGCATGGAAGTGCACT+TGG + chr4_3:3737858-3737877 Msa0624930:CDS 50.0%
ATTCAAGAGCAGCACCCTCA+CGG - chr4_3:3738066-3738085 None:intergenic 50.0%
! GTGCTGCTCTTGAATCTGAG+TGG + chr4_3:3738071-3738090 Msa0624930:CDS 50.0%
ATCAGTGGCGATTTACCTGC+TGG + chr4_3:3738157-3738176 Msa0624930:CDS 50.0%
! TGGCGATTTACCTGCTGGTT+GGG + chr4_3:3738162-3738181 Msa0624930:CDS 50.0%
!! TGGTTGGGAGAAAGCACTTC+CGG + chr4_3:3738177-3738196 Msa0624930:CDS 50.0%
!! CGATAGGTTTCGGGTTGCAT+CGG - chr4_3:3738349-3738368 None:intergenic 50.0%
ACCGGGAAGAACATTCGCAA+GGG - chr4_3:3738388-3738407 None:intergenic 50.0%
GCTCTGCTGGAGAATCACTT+TGG - chr4_3:3738476-3738495 None:intergenic 50.0%
GGAATGGGAGCAATCAGCAA+TGG + chr4_3:3738525-3738544 Msa0624930:CDS 50.0%
!! GTTTTCACCGACTACATGCG+TGG + chr4_3:3738597-3738616 Msa0624930:CDS 50.0%
AATGGCACCACGCATGTAGT+CGG - chr4_3:3738607-3738626 None:intergenic 50.0%
!! ACTACATGCGTGGTGCCATT+AGG + chr4_3:3738607-3738626 Msa0624930:CDS 50.0%
AAGCTTGCCAGGTGCTCTAT+AGG - chr4_3:3738717-3738736 None:intergenic 50.0%
! GGGCGGAGCATCAAGATATT+TGG - chr4_3:3738750-3738769 None:intergenic 50.0%
! GCTGTTTCGTTACCATCAGC+GGG - chr4_3:3738770-3738789 None:intergenic 50.0%
! GCTGATGGTAACGAAACAGC+TGG + chr4_3:3738770-3738789 Msa0624930:CDS 50.0%
AGCTGGGGCATACAAAGTTG+CGG + chr4_3:3738787-3738806 Msa0624930:CDS 50.0%
! TACGGCTAGGGTTAGCATTG+AGG + chr4_3:3739105-3739124 Msa0624930:CDS 50.0%
TTGAGGCCGGATCAACATTC+GGG + chr4_3:3739122-3739141 Msa0624930:CDS 50.0%
GTTGAGGTTGTCGCCCAAAG+AGG - chr4_3:3734584-3734603 None:intergenic 55.0%
AGAGGGAGAGGGAGAGAGAA+GGG - chr4_3:3734619-3734638 None:intergenic 55.0%
!!! GTTGGTTTTGTAGGGGGGGA+GGG - chr4_3:3734654-3734673 None:intergenic 55.0%
! GTTGGTGAGAGAGAGGGAAG+TGG - chr4_3:3734805-3734824 None:intergenic 55.0%
!! GATTGGGGTTGGTGAGAGAG+AGG - chr4_3:3734812-3734831 None:intergenic 55.0%
GGATGTGAGGCGCGTAAGAT+TGG - chr4_3:3734829-3734848 None:intergenic 55.0%
! TGGTGGATGGGAGAGAAGAG+AGG - chr4_3:3734869-3734888 None:intergenic 55.0%
!! GGTTGAGGGTGATGGTGGAT+GGG - chr4_3:3734881-3734900 None:intergenic 55.0%
GATTGAGAGAGGTGGGTGGT+GGG - chr4_3:3734915-3734934 None:intergenic 55.0%
!! GATGGTGGGATTGAGAGAGG+TGG - chr4_3:3734923-3734942 None:intergenic 55.0%
AGAGACGGATGCATGGATGG+CGG - chr4_3:3734955-3734974 None:intergenic 55.0%
TGCAGAGACGGATGCATGGA+TGG - chr4_3:3734958-3734977 None:intergenic 55.0%
CAACACGATCCGTTTCCTCG+CGG + chr4_3:3735022-3735041 Msa0624930:CDS 55.0%
CCGAATCAACCGCGAGGAAA+CGG - chr4_3:3735034-3735053 None:intergenic 55.0%
CCGTTTCCTCGCGGTTGATT+CGG + chr4_3:3735031-3735050 Msa0624930:CDS 55.0%
CCCATTGGAGCACAACCCAT+AGG - chr4_3:3735089-3735108 None:intergenic 55.0%
CGATAGGAAGTCTGACTGCC+GGG + chr4_3:3735725-3735744 Msa0624930:intron 55.0%
CCAAAGATCAGGTGGCTTCC+CGG - chr4_3:3735746-3735765 None:intergenic 55.0%
CGGGAAGCCACCTGATCTTT+GGG + chr4_3:3735744-3735763 Msa0624930:intron 55.0%
! GCCACCTGATCTTTGGGTTC+TGG + chr4_3:3735750-3735769 Msa0624930:intron 55.0%
TTGGCAATGCCCTGACCAAG+AGG - chr4_3:3736828-3736847 None:intergenic 55.0%
!! CAGGGCATTGCCAATGCTGT+TGG + chr4_3:3736834-3736853 Msa0624930:CDS 55.0%
CTTGCTCACTTGCAGGACAC+TGG + chr4_3:3737075-3737094 Msa0624930:CDS 55.0%
TGCTCACTTGCAGGACACTG+GGG + chr4_3:3737077-3737096 Msa0624930:CDS 55.0%
TTGCAGGACACTGGGGACTA+GGG + chr4_3:3737084-3737103 Msa0624930:CDS 55.0%
GGCACGTGGAAAGGCTCATA+TGG - chr4_3:3737924-3737943 None:intergenic 55.0%
! TTTTGACATCCTCGGGCACG+TGG - chr4_3:3737938-3737957 None:intergenic 55.0%
GTGGCGATTTACCTGCTGGT+TGG + chr4_3:3738161-3738180 Msa0624930:CDS 55.0%
AGTGCTTTCTCCCAACCAGC+AGG - chr4_3:3738175-3738194 None:intergenic 55.0%
GCCCTTGCGAATGTTCTTCC+CGG + chr4_3:3738384-3738403 Msa0624930:CDS 55.0%
GACCGGGAAGAACATTCGCA+AGG - chr4_3:3738389-3738408 None:intergenic 55.0%
GTTCTTCCCGGTCTGATTGG+CGG + chr4_3:3738396-3738415 Msa0624930:CDS 55.0%
GGATAGGGCGGAAAGCCTAA+TGG - chr4_3:3738625-3738644 None:intergenic 55.0%
! TGCTCTATAGGCTGGTGGGT+TGG - chr4_3:3738705-3738724 None:intergenic 55.0%
CAGGTGCTCTATAGGCTGGT+GGG - chr4_3:3738709-3738728 None:intergenic 55.0%
TTGCCAGGTGCTCTATAGGC+TGG - chr4_3:3738713-3738732 None:intergenic 55.0%
! TAGAGCACCTGGCAAGCTTC+CGG + chr4_3:3738718-3738737 Msa0624930:CDS 55.0%
GTTTCGTTACCATCAGCGGG+CGG - chr4_3:3738767-3738786 None:intergenic 55.0%
! GATCGGAACCGGTTCCGAAT+TGG + chr4_3:3738952-3738971 Msa0624930:CDS 55.0%
TCCCTACTGCTGTTACGGCT+AGG + chr4_3:3739092-3739111 Msa0624930:CDS 55.0%
CCCTAGCCGTAACAGCAGTA+GGG - chr4_3:3739096-3739115 None:intergenic 55.0%
CCCTACTGCTGTTACGGCTA+GGG + chr4_3:3739093-3739112 Msa0624930:CDS 55.0%
ACCCTAGCCGTAACAGCAGT+AGG - chr4_3:3739097-3739116 None:intergenic 55.0%
! GCTAGGGTTAGCATTGAGGC+CGG + chr4_3:3739109-3739128 Msa0624930:CDS 55.0%
CTCCCACCCGAATGTTGATC+CGG - chr4_3:3739131-3739150 None:intergenic 55.0%
! TTTGGAGCTAGTGCTCCTGC+AGG + chr4_3:3739193-3739212 Msa0624930:CDS 55.0%
GGTTGTCGCCCAAAGAGGAC+TGG - chr4_3:3734579-3734598 None:intergenic 60.0%
GAGAGGGAGAGGGAGAGAGA+AGG - chr4_3:3734620-3734639 None:intergenic 60.0%
GAGAGGGAGAGAGAGGGAGA+GGG - chr4_3:3734630-3734649 None:intergenic 60.0%
AGAGAGGGAGAGAGAGGGAG+AGG - chr4_3:3734631-3734650 None:intergenic 60.0%
GAGGGAGAGAGGGAGAGAGA+GGG - chr4_3:3734636-3734655 None:intergenic 60.0%
!!! GGTTGGTTTTGTAGGGGGGG+AGG - chr4_3:3734655-3734674 None:intergenic 60.0%
GAGGCGCGTAAGATTGGGGT+TGG - chr4_3:3734823-3734842 None:intergenic 60.0%
! TGGTGGATGGGGAGGATGTG+AGG - chr4_3:3734842-3734861 None:intergenic 60.0%
!! AAGAGAGGCGCGTGGTGGAT+GGG - chr4_3:3734854-3734873 None:intergenic 60.0%
!! CGGTTGAGGGTGATGGTGGA+TGG - chr4_3:3734882-3734901 None:intergenic 60.0%
GGATTGAGAGAGGTGGGTGG+TGG - chr4_3:3734916-3734935 None:intergenic 60.0%
GTGGGATTGAGAGAGGTGGG+TGG - chr4_3:3734919-3734938 None:intergenic 60.0%
GTGGTGCAGAGACGGATGCA+TGG - chr4_3:3734962-3734981 None:intergenic 60.0%
GGTTGAGGGTGGTGCAGAGA+CGG - chr4_3:3734970-3734989 None:intergenic 60.0%
GAGTCTGTGGTGGTTGAGGG+TGG - chr4_3:3734981-3735000 None:intergenic 60.0%
CCGGGAAGCCACCTGATCTT+TGG + chr4_3:3735743-3735762 Msa0624930:intron 60.0%
CAATGGGAGAGCAGAACCCC+TGG + chr4_3:3736588-3736607 Msa0624930:CDS 60.0%
ATGCCCTGACCAAGAGGACC+TGG - chr4_3:3736822-3736841 None:intergenic 60.0%
CTTGCAGGACACTGGGGACT+AGG + chr4_3:3737083-3737102 Msa0624930:CDS 60.0%
ACATCCTCGGGCACGTGGAA+AGG - chr4_3:3737933-3737952 None:intergenic 60.0%
TTGGAGTCGCCACATCCGTG+AGG + chr4_3:3738048-3738067 Msa0624930:CDS 60.0%
TGGAGTCGCCACATCCGTGA+GGG + chr4_3:3738049-3738068 Msa0624930:CDS 60.0%
! GTTGCATCGGCAGGGATCTC+TGG - chr4_3:3738336-3738355 None:intergenic 60.0%
!! GGTTTCGGGTTGCATCGGCA+GGG - chr4_3:3738344-3738363 None:intergenic 60.0%
!! AGGTTTCGGGTTGCATCGGC+AGG - chr4_3:3738345-3738364 None:intergenic 60.0%
TGCACTGCCGCCAATCAGAC+CGG - chr4_3:3738406-3738425 None:intergenic 60.0%
CTTTCCGCCCTATCCGAAGC+CGG + chr4_3:3738630-3738649 Msa0624930:CDS 60.0%
!! AACACCGGCTTCGGATAGGG+CGG - chr4_3:3738637-3738656 None:intergenic 60.0%
CCAGGTGCTCTATAGGCTGG+TGG - chr4_3:3738710-3738729 None:intergenic 60.0%
! CCACCAGCCTATAGAGCACC+TGG + chr4_3:3738707-3738726 Msa0624930:intron 60.0%
! AGAGCACCTGGCAAGCTTCC+GGG + chr4_3:3738719-3738738 Msa0624930:CDS 60.0%
AGGCCGGATCAACATTCGGG+TGG + chr4_3:3739125-3739144 Msa0624930:CDS 60.0%
GGCCGGATCAACATTCGGGT+GGG + chr4_3:3739126-3739145 Msa0624930:CDS 60.0%
GGAGGGAGAGAGGGAGAGAG+AGG - chr4_3:3734637-3734656 None:intergenic 65.0%
TGTAGGGGGGGAGGGAGAGA+GGG - chr4_3:3734646-3734665 None:intergenic 65.0%
TTGTAGGGGGGGAGGGAGAG+AGG - chr4_3:3734647-3734666 None:intergenic 65.0%
!! AGAGAGGCGCGTGGTGGATG+GGG - chr4_3:3734853-3734872 None:intergenic 65.0%
! GAAGAGAGGCGCGTGGTGGA+TGG - chr4_3:3734855-3734874 None:intergenic 65.0%
! GAGAGAAGAGAGGCGCGTGG+TGG - chr4_3:3734859-3734878 None:intergenic 65.0%
! TGGGAGAGAAGAGAGGCGCG+TGG - chr4_3:3734862-3734881 None:intergenic 65.0%
! GGTGCGGTTGAGGGTGATGG+TGG - chr4_3:3734886-3734905 None:intergenic 65.0%
GTGGGTGCGGTTGAGGGTGA+TGG - chr4_3:3734889-3734908 None:intergenic 65.0%
! GGGAGTGTGGGTGCGGTTGA+GGG - chr4_3:3734895-3734914 None:intergenic 65.0%
! TGGGAGTGTGGGTGCGGTTG+AGG - chr4_3:3734896-3734915 None:intergenic 65.0%
!! GAGGTGGGTGGTGGGAGTGT+GGG - chr4_3:3734907-3734926 None:intergenic 65.0%
!! AGAGGTGGGTGGTGGGAGTG+TGG - chr4_3:3734908-3734927 None:intergenic 65.0%
GGCGGTGTGGCGAAGATGGT+GGG - chr4_3:3734937-3734956 None:intergenic 65.0%
TGGCGGTGTGGCGAAGATGG+TGG - chr4_3:3734938-3734957 None:intergenic 65.0%
! GGATGGCGGTGTGGCGAAGA+TGG - chr4_3:3734941-3734960 None:intergenic 65.0%
! CGGATGCATGGATGGCGGTG+TGG - chr4_3:3734950-3734969 None:intergenic 65.0%
TGAGCCTTTCCACGTGCCCG+AGG + chr4_3:3737926-3737945 Msa0624930:CDS 65.0%
GAGCAGCACCCTCACGGATG+TGG - chr4_3:3738060-3738079 None:intergenic 65.0%
GCACTGCCGCCAATCAGACC+GGG - chr4_3:3738405-3738424 None:intergenic 65.0%
GGCATCGCTCTTCACAGCCG+TGG + chr4_3:3738546-3738565 Msa0624930:CDS 65.0%
GCATTGCCCGGAAGCTTGCC+AGG - chr4_3:3738728-3738747 None:intergenic 65.0%
CTTGATGCTCCGCCCGCTGA+TGG + chr4_3:3738755-3738774 Msa0624930:CDS 65.0%
!! GGGTGGTGGGAGTGTGGGTG+CGG - chr4_3:3734902-3734921 None:intergenic 70.0%
!! GAGGCGCGTGGTGGATGGGG+AGG - chr4_3:3734850-3734869 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 3734566 3739282 3734566 ID=Msa0624930;Name=Msa0624930
chr4_3 mRNA 3734566 3739282 3734566 ID=Msa0624930-mRNA-1;Parent=Msa0624930;Name=Msa0624930-mRNA-1;_AED=0.13;_eAED=0.13;_QI=199|0.87|0.77|1|0.87|0.77|9|0|713
chr4_3 exon 3734566 3734636 3734566 ID=Msa0624930-mRNA-1:exon:884;Parent=Msa0624930-mRNA-1
chr4_3 exon 3734661 3735250 3734661 ID=Msa0624930-mRNA-1:exon:885;Parent=Msa0624930-mRNA-1
chr4_3 exon 3736564 3736654 3736564 ID=Msa0624930-mRNA-1:exon:886;Parent=Msa0624930-mRNA-1
chr4_3 exon 3736823 3736928 3736823 ID=Msa0624930-mRNA-1:exon:887;Parent=Msa0624930-mRNA-1
chr4_3 exon 3737025 3737307 3737025 ID=Msa0624930-mRNA-1:exon:888;Parent=Msa0624930-mRNA-1
chr4_3 exon 3737810 3737958 3737810 ID=Msa0624930-mRNA-1:exon:889;Parent=Msa0624930-mRNA-1
chr4_3 exon 3738045 3738198 3738045 ID=Msa0624930-mRNA-1:exon:890;Parent=Msa0624930-mRNA-1
chr4_3 exon 3738324 3738651 3738324 ID=Msa0624930-mRNA-1:exon:891;Parent=Msa0624930-mRNA-1
chr4_3 exon 3738714 3739282 3738714 ID=Msa0624930-mRNA-1:exon:892;Parent=Msa0624930-mRNA-1
chr4_3 five_prime_UTR 3734566 3734636 3734566 ID=Msa0624930-mRNA-1:five_prime_utr;Parent=Msa0624930-mRNA-1
chr4_3 five_prime_UTR 3734661 3734788 3734661 ID=Msa0624930-mRNA-1:five_prime_utr;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3734789 3735250 3734789 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3736564 3736654 3736564 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3736823 3736928 3736823 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3737025 3737307 3737025 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3737810 3737958 3737810 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3738045 3738198 3738045 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3738324 3738651 3738324 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
chr4_3 CDS 3738714 3739282 3738714 ID=Msa0624930-mRNA-1:cds;Parent=Msa0624930-mRNA-1
Gene Sequence

>Msa0624930

ATGTCTTCAACTTCCACTTCCCTCTCTCTCACCAACCCCAATCTTACGCGCCTCACATCCTCCCCATCCACCACGCGCCTCTCTTCTCTCCCATCCACCATCACCCTCAACCGCACCCACACTCCCACCACCCACCTCTCTCAATCCCACCATCTTCGCCACACCGCCATCCATGCATCCGTCTCTGCACCACCCTCAACCACCACAGACTCATCTCTCGTTGAGAAATCAGTCAACACGATCCGTTTCCTCGCGGTTGATTCGGTTGAAAAAGCCAATTCGGGTCATCCTGGTTTACCTATGGGTTGTGCTCCAATGGGTCATGTGCTTTATGATGAGGTTATGAGATATAATCCCAAGAATCCGTTTTGGTTTAACCGTGATCGGTTTGTTTTGTCTGCTGGTCATGGTTGTATGCTTCAGTATGCTTTGCTTCATCTTGCTGGATATGACAGTGTTCAGGTAGAAGATTTGAAGCAATTTCGTCAATGGGAGAGCAGAACCCCTGGACACCCTGAGAATTTTGAAACTCCTGGAATTGAAGTCACAACAGGTCCTCTTGGTCAGGGCATTGCCAATGCTGTTGGTTTAGCCCTTGCAGAGAAGCACTTAGCTGCCAGATTTAACAAGCCCGACAATGAGATCGTCGATCATTACACGTATTGTATATTGGGTGATGGTTGTCAAATGGAGGGAATTGCAAATGAAGCTTGCTCACTTGCAGGACACTGGGGACTAGGGAAGCTAATAGCATTTTACGATGACAATCACATTTCTATTGACGGTGACACCGAAATCGCGTTCACTGAGAGTGTTGAAAAACGTTTTGAGGGACTTGGGTGGCATGTTATTTGGGTAAAGAATGGAAACACTGGCTTTGATGAAATTCGTGCTGCCATTAAGGAAGCAAAAGCTGTCAAAGACAGACCCACATTGATCAAGTTCACAACAACTATTGGTTATGGTTCTCCGAATAAATCCAACTCCTACAGTGTGCATGGAAGTGCACTTGGTGCCAAAGAAGTTGATGCCACAAGAAACAATCTTGGATGGCCATATGAGCCTTTCCACGTGCCCGAGGATGTCAAAAAGCATTGGAGTCGCCACATCCGTGAGGGTGCTGCTCTTGAATCTGAGTGGAATGCCAAGTTTGCTGAATATGAAAAGAAGTACAAGGAGGAAGCTGCCGTTTTGAAATCTATCATCAGTGGCGATTTACCTGCTGGTTGGGAGAAAGCACTTCCGACTTACACTCCAGAGATCCCTGCCGATGCAACCCGAAACCTATCGCAGCAAAACCTTAATGCCCTTGCGAATGTTCTTCCCGGTCTGATTGGCGGCAGTGCAGATCTTGCTTCTTCCAATATGACCTTGCTGAAAAAGTTTGGTGATTTCCAAAGTGATTCTCCAGCAGAGCGTAACGTTAGATTTGGTGTTAGAGAACATGGAATGGGAGCAATCAGCAATGGCATCGCTCTTCACAGCCGTGGACTTATTCCATACTGTGCAACCTTTTTTGTTTTCACCGACTACATGCGTGGTGCCATTAGGCTTTCCGCCCTATCCGAAGCCGCCTATAGAGCACCTGGCAAGCTTCCGGGCAATGCCAAATATCTTGATGCTCCGCCCGCTGATGGTAACGAAACAGCTGGGGCATACAAAGTTGCGGTGCTTAACAGGAAGAGACCCTCTATCCTTGCCCTTTCTAGACAAAAATTGCCTAACCTTGCCGGAACTTCTATTGAAGGAGTTGAAAAGGGTGGATACATCGTCTCTGACAACTCAACAGGAAACAAACCTGATGTCATTTTGATCGGAACCGGTTCCGAATTGGAAATTGCATACAAAGCTGGTGAGGATCTAAGAAAAGAAGGAAAGGCTGTTAGAGTTGTTTCCTTTGTTTCTTGGGAACTTTTTGATGAACAATCACAAGCTTACAAGGAGAGTGTTCTCCCTACTGCTGTTACGGCTAGGGTTAGCATTGAGGCCGGATCAACATTCGGGTGGGAGAAAATTGTTGGAAGCAAAGGAAAAGCAATCGGCATTGATCGTTTTGGAGCTAGTGCTCCTGCAGGAACAATATACAAAGAGTTTGGTATCACTAAAGAAGCTGTTATTGCTGCAGCAAAAGAGCTTATTTAG
Protein sequence

>Msa0624930

MSSTSTSLSLTNPNLTRLTSSPSTTRLSSLPSTITLNRTHTPTTHLSQSHHLRHTAIHASVSAPPSTTTDSSLVEKSVNTIRFLAVDSVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPFWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVEDLKQFRQWESRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNEIVDHYTYCILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVEKRFEGLGWHVIWVKNGNTGFDEIRAAIKEAKAVKDRPTLIKFTTTIGYGSPNKSNSYSVHGSALGAKEVDATRNNLGWPYEPFHVPEDVKKHWSRHIREGAALESEWNAKFAEYEKKYKEEAAVLKSIISGDLPAGWEKALPTYTPEIPADATRNLSQQNLNALANVLPGLIGGSADLASSNMTLLKKFGDFQSDSPAERNVRFGVREHGMGAISNGIALHSRGLIPYCATFFVFTDYMRGAIRLSALSEAAYRAPGKLPGNAKYLDAPPADGNETAGAYKVAVLNRKRPSILALSRQKLPNLAGTSIEGVEKGGYIVSDNSTGNKPDVILIGTGSELEIAYKAGEDLRKEGKAVRVVSFVSWELFDEQSQAYKESVLPTAVTARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGTIYKEFGITKEAVIAAAKELI*