Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190610 | sp|Q54XK2|SC61A_DICDI | 73.276 | 464 | 123 | 1 | 4 | 467 | 2 | 464 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190610 | A0A2K3N9A6 | 100.000 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009290 | Msa1190610 | 0.808489 | 3.019689e-50 | -8.615850e-47 |
| Msa0037180 | Msa1190610 | 0.813801 | 2.129964e-51 | -8.615850e-47 |
| Msa0092220 | Msa1190610 | 0.805090 | 1.578631e-49 | -8.615850e-47 |
| Msa0624930 | Msa1190610 | 0.801944 | 7.089173e-49 | -8.615850e-47 |
| Msa0225070 | Msa1190610 | -0.811919 | 5.502216e-51 | -8.615850e-47 |
| Msa0463970 | Msa1190610 | 0.801866 | 7.355896e-49 | -8.615850e-47 |
| Msa1070630 | Msa1190610 | -0.808212 | 3.460205e-50 | -8.615850e-47 |
| Msa0248410 | Msa1190610 | 0.812376 | 4.373414e-51 | -8.615850e-47 |
| Msa0304060 | Msa1190610 | -0.811467 | 6.900620e-51 | -8.615850e-47 |
| Msa1158450 | Msa1190610 | -0.804280 | 2.330101e-49 | -8.615850e-47 |
| Msa1190610 | Msa1192800 | 0.829674 | 4.511592e-55 | -8.615850e-47 |
| Msa1190610 | Msa1205270 | -0.800523 | 1.384582e-48 | -8.615850e-47 |
| Msa1190610 | Msa1205330 | 0.804042 | 2.612363e-49 | -8.615850e-47 |
| Msa1190610 | Msa1244900 | 0.811633 | 6.349751e-51 | -8.615850e-47 |
| Msa1190610 | Msa1251230 | 0.810586 | 1.070594e-50 | -8.615850e-47 |
| Msa1190610 | Msa1297220 | -0.809791 | 1.589359e-50 | -8.615850e-47 |
| Msa1190610 | Msa1317240 | -0.802060 | 6.710427e-49 | -8.615850e-47 |
| Msa1190610 | Msa1323260 | -0.838318 | 3.087188e-57 | -8.615850e-47 |
| Msa1190610 | Msa1327440 | 0.820145 | 8.008226e-53 | -8.615850e-47 |
| Msa1190610 | Msa1343450 | -0.823589 | 1.276830e-53 | -8.615850e-47 |
| Msa1190610 | Msa1387530 | 0.803483 | 3.411662e-49 | -8.615850e-47 |
| Msa1190610 | Msa1456620 | -0.806153 | 9.444667e-50 | -8.615850e-47 |
| Msa0529650 | Msa1190610 | 0.801094 | 1.058885e-48 | -8.615850e-47 |
| Msa0579230 | Msa1190610 | -0.806158 | 9.421630e-50 | -8.615850e-47 |
| Msa0595530 | Msa1190610 | 0.814588 | 1.427437e-51 | -8.615850e-47 |
| Msa0868610 | Msa1190610 | 0.818333 | 2.070043e-52 | -8.615850e-47 |
| Msa0932140 | Msa1190610 | 0.804494 | 2.102757e-49 | -8.615850e-47 |
| Msa0932150 | Msa1190610 | 0.811062 | 8.445502e-51 | -8.615850e-47 |
| Msa0967900 | Msa1190610 | -0.827624 | 1.411605e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190610 | MtrunA17_Chr8g0359731 | 100.000 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 0.0 | 964 |
| Msa1190610 | MtrunA17_Chr8g0372551 | 99.580 | 476 | 2 | 0 | 1 | 476 | 1 | 476 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190610 | AT2G34250.2 | 93.697 | 476 | 29 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1190610 | AT2G34250.3 | 93.697 | 476 | 29 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1190610 | AT2G34250.1 | 93.697 | 476 | 29 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1190610 | AT1G29310.1 | 93.487 | 476 | 30 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1190610 | AT1G29310.2 | 93.487 | 476 | 30 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1190610 | AT1G78720.2 | 90.947 | 475 | 42 | 1 | 1 | 475 | 1 | 474 | 0.0 | 889 |
| Msa1190610 | AT1G78720.1 | 90.947 | 475 | 42 | 1 | 1 | 475 | 1 | 474 | 0.0 | 889 |
| Msa1190610 | AT1G78720.3 | 90.526 | 475 | 42 | 2 | 1 | 475 | 1 | 472 | 0.0 | 879 |
Find 172 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGTTGCCTATGTTCTTTC+TGG | 0.132994 | 8_1:+33714606 | Msa1190610:CDS |
| GTTCTTCCTTACTGTGTTAA+AGG | 0.148284 | 8_1:-33716514 | None:intergenic |
| CGGGCATTCTTTGACCTTAC+AGG | 0.191772 | 8_1:-33715124 | None:intergenic |
| AGCTCCCCGACCACTGTTAA+TGG | 0.203929 | 8_1:-33714927 | None:intergenic |
| TTGAGAGAGATTGAGAATTT+TGG | 0.207235 | 8_1:-33713343 | None:intergenic |
| GATGCAGTGAAAACATTATA+TGG | 0.228906 | 8_1:+33714885 | Msa1190610:intron |
| TCAATTGATCTTTCACAAAT+AGG | 0.242678 | 8_1:+33713362 | Msa1190610:five_prime_UTR |
| TTATCCCGCACCCACAGTTT+TGG | 0.266212 | 8_1:+33716468 | Msa1190610:three_prime_UTR |
| GTAAGATGGGAGGTGGGTTT+AGG | 0.266404 | 8_1:+33714088 | Msa1190610:exon |
| TACTTCCTCACTTTAGAAAA+AGG | 0.274495 | 8_1:-33716557 | None:intergenic |
| GCCAGCGAGCTTGGTTTCTT+TGG | 0.285931 | 8_1:+33716397 | Msa1190610:CDS |
| TTCATGGGTGCAATTGGTTC+CGG | 0.294173 | 8_1:+33716310 | Msa1190610:CDS |
| CTGTCCGCAGTCTGAACTTC+AGG | 0.294483 | 8_1:-33714147 | None:intergenic |
| TTATAATAATTACCAGATAT+TGG | 0.298291 | 8_1:-33714778 | None:intergenic |
| TATTTATTGCCACCAATATC+TGG | 0.300562 | 8_1:+33714766 | Msa1190610:CDS |
| ATTCCCACTGCTGCTGCATT+TGG | 0.313275 | 8_1:+33716250 | Msa1190610:CDS |
| CTTGGAAGTATATCACAATT+AGG | 0.332365 | 8_1:-33715084 | None:intergenic |
| TAAGATGGGAGGTGGGTTTA+GGG | 0.344334 | 8_1:+33714089 | Msa1190610:exon |
| CAGGTTAAATTATTGTAATC+TGG | 0.344873 | 8_1:+33714066 | Msa1190610:intron |
| GTTCTAGATAGATATCCTTT+TGG | 0.345343 | 8_1:+33717052 | Msa1190610:three_prime_UTR |
| GACAGTATTGGCAGATTTCA+TGG | 0.346559 | 8_1:+33716294 | Msa1190610:CDS |
| TGGTCTTGTAATGCAGCTTT+TGG | 0.346972 | 8_1:+33714359 | Msa1190610:CDS |
| CATACGAGGATCTTGCTCTT+TGG | 0.352248 | 8_1:+33717027 | Msa1190610:three_prime_UTR |
| TCACTGTTGGTGACGCAATC+GGG | 0.358234 | 8_1:+33716443 | Msa1190610:three_prime_UTR |
| TCATCATTGAACAAAATGTT+TGG | 0.362793 | 8_1:-33717120 | None:intergenic |
| GAGGTGTAAAACAGTTTGAT+TGG | 0.363102 | 8_1:-33715166 | None:intergenic |
| TCATGGGTGCAATTGGTTCC+GGG | 0.364241 | 8_1:+33716311 | Msa1190610:CDS |
| AAAGGCTATGGTTTGGGATC+TGG | 0.365013 | 8_1:+33714735 | Msa1190610:CDS |
| AAGGGCAGACTGAAGAATAA+TGG | 0.365554 | 8_1:-33715197 | None:intergenic |
| TTAGATGAGCTCCTTCAAAA+AGG | 0.368354 | 8_1:+33714717 | Msa1190610:CDS |
| CGCACTTTAAACATTTCAAA+TGG | 0.383407 | 8_1:+33717154 | Msa1190610:three_prime_UTR |
| TGTAGTCAGCTTCCTCTGTA+TGG | 0.391279 | 8_1:+33714231 | Msa1190610:CDS |
| ATTATTGTAATCTGGTAAGA+TGG | 0.393254 | 8_1:+33714074 | Msa1190610:exon |
| TTCAAACCGTGGAACTGTTA+TGG | 0.394615 | 8_1:+33714308 | Msa1190610:CDS |
| GCAGATTTCATGGGTGCAAT+TGG | 0.395146 | 8_1:+33716304 | Msa1190610:CDS |
| TGTTACTGCAAGTAATATTC+CGG | 0.397434 | 8_1:-33716335 | None:intergenic |
| ACTCAAGTTAACATAGATCT+TGG | 0.401783 | 8_1:-33717087 | None:intergenic |
| TTAGGGTACTTCACTTAGTA+AGG | 0.406793 | 8_1:+33714106 | Msa1190610:CDS |
| CAACTTGCAGGAACAACAAA+TGG | 0.409211 | 8_1:+33716177 | Msa1190610:intron |
| TATGTTCTTTCTGGAATGTA+TGG | 0.413955 | 8_1:+33714615 | Msa1190610:CDS |
| CCCACTGCTGCTGCATTTGG+AGG | 0.416693 | 8_1:+33716253 | Msa1190610:CDS |
| AAAACTTGGATTGAAGTCTC+TGG | 0.424950 | 8_1:+33715698 | Msa1190610:CDS |
| AATGGTAATGCCTGGTCATC+GGG | 0.426397 | 8_1:+33716195 | Msa1190610:CDS |
| AGACAAGGTTCGTGCCCTTC+GGG | 0.427599 | 8_1:+33715000 | Msa1190610:CDS |
| ATCACTGTTGGTGACGCAAT+CGG | 0.428465 | 8_1:+33716442 | Msa1190610:three_prime_UTR |
| CAGACAAGGTTCGTGCCCTT+CGG | 0.431276 | 8_1:+33714999 | Msa1190610:CDS |
| AAAGAATGCCCGTGGACAGC+AGG | 0.432758 | 8_1:+33715135 | Msa1190610:CDS |
| TTTACAACGATATGCTACTT+TGG | 0.435426 | 8_1:-33716580 | None:intergenic |
| AAGGAAAGAGCCAGCGAGCT+TGG | 0.436512 | 8_1:+33716388 | Msa1190610:CDS |
| CTGGGAAATGAAGTAGAGAT+TGG | 0.437679 | 8_1:-33715224 | None:intergenic |
| ACCCTTTCTTCTATTTGAAT+CGG | 0.439300 | 8_1:+33713282 | Msa1190610:five_prime_UTR |
| AGGGCAGACTGAAGAATAAT+GGG | 0.440665 | 8_1:-33715196 | None:intergenic |
| TGAAATCTGCCAATACTGTC+AGG | 0.442633 | 8_1:-33716291 | None:intergenic |
| GCTAGCAGATTTGTGACATT+GGG | 0.446952 | 8_1:-33715046 | None:intergenic |
| AACTTTATTGTGAATCTGTT+GGG | 0.450828 | 8_1:+33715358 | Msa1190610:CDS |
| CGTGGAACTGTTATGGAGCT+TGG | 0.452315 | 8_1:+33714315 | Msa1190610:CDS |
| TTGTGAATCTGTTGGGCAAA+TGG | 0.454503 | 8_1:+33715365 | Msa1190610:CDS |
| GGTGCAATTGGTTCCGGGAC+CGG | 0.461353 | 8_1:+33716316 | Msa1190610:CDS |
| CAGGTGCAGATCCATTCTAT+TGG | 0.462335 | 8_1:+33714268 | Msa1190610:CDS |
| TATATGACCTTCTCTCTAAA+CGG | 0.468462 | 8_1:-33714177 | None:intergenic |
| TTCCGATTCAAATAGAAGAA+AGG | 0.468653 | 8_1:-33713284 | None:intergenic |
| AAATGGAAGGAATCTGAATA+TGG | 0.470788 | 8_1:+33715382 | Msa1190610:CDS |
| CTCGGCATCTTGATAGCTGT+TGG | 0.474492 | 8_1:+33714579 | Msa1190610:CDS |
| GCAAAACCACGCGGAAACCT+TGG | 0.474505 | 8_1:-33715102 | None:intergenic |
| ATTTCAAATGGATGATGACT+TGG | 0.482567 | 8_1:+33717166 | Msa1190610:three_prime_UTR |
| TAGTATGCAATGCCACCAAC+AGG | 0.483522 | 8_1:-33715421 | None:intergenic |
| GACAACCATTAACAGTGGTC+GGG | 0.484351 | 8_1:+33714922 | Msa1190610:CDS |
| TAATCTGGTAAGATGGGAGG+TGG | 0.484850 | 8_1:+33714081 | Msa1190610:exon |
| TGGTCGGGGAGCTGAATTTG+AGG | 0.485535 | 8_1:+33714937 | Msa1190610:CDS |
| CAGCAGCAGTGGGAATATAT+CGG | 0.486111 | 8_1:-33716243 | None:intergenic |
| CTCTGCTCAGTCATCACTGT+TGG | 0.489203 | 8_1:+33716430 | Msa1190610:three_prime_UTR |
| TCAGGAAGGAATGATAGAAA+TGG | 0.489436 | 8_1:-33714129 | None:intergenic |
| AGATGTTGCCAAGCAGTTGA+AGG | 0.492024 | 8_1:+33715733 | Msa1190610:CDS |
| CACTGTTGGTGACGCAATCG+GGG | 0.494320 | 8_1:+33716444 | Msa1190610:three_prime_UTR |
| ACAAGACCAGAAGTGACAAT+GGG | 0.497571 | 8_1:-33714345 | None:intergenic |
| CTGTTCTAGTGATCAACAAA+TGG | 0.498414 | 8_1:-33714979 | None:intergenic |
| TGACATTGGGCAGATTCTGC+CGG | 0.499216 | 8_1:-33715033 | None:intergenic |
| CGACCACTGTTAATGGTTGT+CGG | 0.500128 | 8_1:-33714920 | None:intergenic |
| TCCGATTCAAATAGAAGAAA+GGG | 0.502378 | 8_1:-33713283 | None:intergenic |
| GCATTTGGAGGAATGTGTAT+TGG | 0.503549 | 8_1:+33716265 | Msa1190610:CDS |
| AAATTTGATTCCCGATGACC+AGG | 0.504394 | 8_1:-33716205 | None:intergenic |
| TATGGAATACACTCAACAAC+AGG | 0.504696 | 8_1:+33714249 | Msa1190610:CDS |
| TATGGTAGTGTAGGCCAGCT+TGG | 0.505753 | 8_1:+33714633 | Msa1190610:CDS |
| AAATGGTAATGCCTGGTCAT+CGG | 0.505999 | 8_1:+33716194 | Msa1190610:CDS |
| TACCCCAAAACTGTGGGTGC+GGG | 0.508439 | 8_1:-33716472 | None:intergenic |
| ATAACACGCATCCAATAGAA+TGG | 0.515174 | 8_1:-33714279 | None:intergenic |
| CTGAAGAATAATGGGCATGT+TGG | 0.515561 | 8_1:-33715188 | None:intergenic |
| CTCAAGTTAACATAGATCTT+GGG | 0.516074 | 8_1:-33717086 | None:intergenic |
| TGATGAATATTTCTTTGAAG+AGG | 0.518607 | 8_1:+33716727 | Msa1190610:three_prime_UTR |
| AGCTAGCAGATTTGTGACAT+TGG | 0.520122 | 8_1:-33715047 | None:intergenic |
| TGGCATTTCCCACTCCAAGC+TGG | 0.520195 | 8_1:-33714647 | None:intergenic |
| ACCAAAGAAACCAAGCTCGC+TGG | 0.523159 | 8_1:-33716398 | None:intergenic |
| TTATTGTAATCTGGTAAGAT+GGG | 0.524003 | 8_1:+33714075 | Msa1190610:exon |
| ATACCCCAAAACTGTGGGTG+CGG | 0.525765 | 8_1:-33716473 | None:intergenic |
| TCCTCCAAATGCAGCAGCAG+TGG | 0.526488 | 8_1:-33716254 | None:intergenic |
| TGCAAGTAATATTCCGGTCC+CGG | 0.529370 | 8_1:-33716329 | None:intergenic |
| GGGTATTGAGGAATGGAAGT+AGG | 0.531311 | 8_1:+33716490 | Msa1190610:three_prime_UTR |
| AAACTTTATTGTGAATCTGT+TGG | 0.531885 | 8_1:+33715357 | Msa1190610:CDS |
| CAATCTCTACTTCATTTCCC+AGG | 0.533946 | 8_1:+33715225 | Msa1190610:CDS |
| TAAACATATGACAATGATAC+CGG | 0.537182 | 8_1:-33714697 | None:intergenic |
| CGGGTGAGAGAAGCTAAAGC+TGG | 0.539021 | 8_1:-33717193 | None:intergenic |
| CTAATTGTGATATACTTCCA+AGG | 0.539046 | 8_1:+33715085 | Msa1190610:CDS |
| TGGTTCCGGTGGGTAAGAAG+TGG | 0.540597 | 8_1:-33713323 | None:intergenic |
| GGTCACTCTATTCCTGTTGG+TGG | 0.542254 | 8_1:+33715409 | Msa1190610:CDS |
| CAGTTCCACGGTTTGAAGCA+AGG | 0.542857 | 8_1:-33714302 | None:intergenic |
| TGAAGTAGAGATTGGAAACA+AGG | 0.543347 | 8_1:-33715216 | None:intergenic |
| CTGAAGTTCAGACTGCGGAC+AGG | 0.544729 | 8_1:+33714148 | Msa1190610:CDS |
| CGACAACCATTAACAGTGGT+CGG | 0.550736 | 8_1:+33714921 | Msa1190610:CDS |
| TAAAAGTACGCTTTACTCGT+TGG | 0.551798 | 8_1:-33716660 | None:intergenic |
| ACAGTATTGGCAGATTTCAT+GGG | 0.552268 | 8_1:+33716295 | Msa1190610:CDS |
| GAACAATGCATGGAAAGGAT+TGG | 0.553602 | 8_1:-33715636 | None:intergenic |
| ACTATATAACTGCACCCTCT+AGG | 0.554045 | 8_1:+33715440 | Msa1190610:CDS |
| CAGATCCACTTCTTACCCAC+CGG | 0.554182 | 8_1:+33713318 | Msa1190610:five_prime_UTR |
| GGTGGTCACTCTATTCCTGT+TGG | 0.554775 | 8_1:+33715406 | Msa1190610:CDS |
| GAACAACAAATGGTAATGCC+TGG | 0.556580 | 8_1:+33716187 | Msa1190610:CDS |
| GTACTTTGAGACATTTGAGA+AGG | 0.557787 | 8_1:+33716369 | Msa1190610:CDS |
| AATCTGTACCTTCAACTGCT+TGG | 0.557872 | 8_1:-33715741 | None:intergenic |
| AGTGTAGGCCAGCTTGGAGT+GGG | 0.558950 | 8_1:+33714639 | Msa1190610:CDS |
| AAGAATAATGGGCATGTTGG+AGG | 0.559009 | 8_1:-33715185 | None:intergenic |
| GTAGGTCCTTTAACACAGTA+AGG | 0.560861 | 8_1:+33716508 | Msa1190610:three_prime_UTR |
| GGTCGGGGAGCTGAATTTGA+GGG | 0.561143 | 8_1:+33714938 | Msa1190610:CDS |
| GATATGAACCCTGCTGTCCA+CGG | 0.564388 | 8_1:-33715144 | None:intergenic |
| AAAGAAATATTCATCATACA+TGG | 0.568310 | 8_1:-33716720 | None:intergenic |
| ATATGAACCCTGCTGTCCAC+GGG | 0.572002 | 8_1:-33715143 | None:intergenic |
| TCTGGAATGTATGGTAGTGT+AGG | 0.575875 | 8_1:+33714624 | Msa1190610:CDS |
| AAAATTCTCTATTACCTAGA+GGG | 0.576749 | 8_1:-33715454 | None:intergenic |
| TATTGGTGCCCTGACAGTAT+TGG | 0.578050 | 8_1:+33716282 | Msa1190610:CDS |
| TGGGACAAGAGCTACCCAAA+AGG | 0.579319 | 8_1:-33717067 | None:intergenic |
| AACGGTGCACAGAAGCTACT+CGG | 0.579576 | 8_1:+33714561 | Msa1190610:CDS |
| TAATAATTACCAGATATTGG+TGG | 0.583818 | 8_1:-33714775 | None:intergenic |
| GTTATCCTTGCTTCAAACCG+TGG | 0.587811 | 8_1:+33714297 | Msa1190610:CDS |
| GCCGGTAAAATGCTTCCCGA+AGG | 0.588847 | 8_1:-33715015 | None:intergenic |
| ACACAAGGTAGAACAATGCA+TGG | 0.589874 | 8_1:-33715646 | None:intergenic |
| CCTCCAAATGCAGCAGCAGT+GGG | 0.591311 | 8_1:-33716253 | None:intergenic |
| TCCTCAATACCCCAAAACTG+TGG | 0.591641 | 8_1:-33716479 | None:intergenic |
| AATCTGGTAAGATGGGAGGT+GGG | 0.593332 | 8_1:+33714082 | Msa1190610:exon |
| AAAAGAGCTGGAGGATGATG+AGG | 0.594915 | 8_1:-33714671 | None:intergenic |
| AGGTAGAACAATGCATGGAA+AGG | 0.595832 | 8_1:-33715641 | None:intergenic |
| ATACATTCCAGAAAGAACAT+AGG | 0.597151 | 8_1:-33714613 | None:intergenic |
| TACAAGACCAGAAGTGACAA+TGG | 0.598549 | 8_1:-33714346 | None:intergenic |
| CAAGCTCCATAACAGTTCCA+CGG | 0.599214 | 8_1:-33714314 | None:intergenic |
| TCAAATAGAAGAAAGGGTGG+AGG | 0.604907 | 8_1:-33713277 | None:intergenic |
| TAGTGTAGGCCAGCTTGGAG+TGG | 0.606241 | 8_1:+33714638 | Msa1190610:CDS |
| CCTCAATACCCCAAAACTGT+GGG | 0.615255 | 8_1:-33716478 | None:intergenic |
| AAGGAATCTGAATATGGAGG+TGG | 0.616063 | 8_1:+33715388 | Msa1190610:CDS |
| ACAACCATTAACAGTGGTCG+GGG | 0.617144 | 8_1:+33714923 | Msa1190610:CDS |
| GAAAGTACCGTTTAGAGAGA+AGG | 0.618453 | 8_1:+33714170 | Msa1190610:CDS |
| CCGGTAAAATGCTTCCCGAA+GGG | 0.619784 | 8_1:-33715014 | None:intergenic |
| GAATCTGTTGGGCAAATGGA+AGG | 0.629594 | 8_1:+33715369 | Msa1190610:CDS |
| GAAATCTGCCAATACTGTCA+GGG | 0.633038 | 8_1:-33716290 | None:intergenic |
| CCGCAGTCTGAACTTCAGGA+AGG | 0.633970 | 8_1:-33714143 | None:intergenic |
| ACAAGAGAGCACGATCCTCA+CGG | 0.636825 | 8_1:-33714416 | None:intergenic |
| AAGAATGCCCGTGGACAGCA+GGG | 0.641052 | 8_1:+33715136 | Msa1190610:CDS |
| TTGTAATCTGGTAAGATGGG+AGG | 0.643757 | 8_1:+33714078 | Msa1190610:exon |
| GATTCAAATAGAAGAAAGGG+TGG | 0.647342 | 8_1:-33713280 | None:intergenic |
| GTTGATCACTAGAACAGACA+AGG | 0.650882 | 8_1:+33714985 | Msa1190610:CDS |
| GAAGTAGAGATTGGAAACAA+GGG | 0.653350 | 8_1:-33715215 | None:intergenic |
| GAGCTGGAGGATGATGAGGA+TGG | 0.654773 | 8_1:-33714667 | None:intergenic |
| CATCTTGATAGCTGTTGGAG+AGG | 0.657186 | 8_1:+33714584 | Msa1190610:CDS |
| GTTGAGTGTATTCCATACAG+AGG | 0.661533 | 8_1:-33714243 | None:intergenic |
| GTAAGGTCAAAGAATGCCCG+TGG | 0.666399 | 8_1:+33715127 | Msa1190610:CDS |
| CCTTCCTGAAGTTCAGACTG+CGG | 0.670428 | 8_1:+33714143 | Msa1190610:CDS |
| TGGAAGGAATCTGAATATGG+AGG | 0.673442 | 8_1:+33715385 | Msa1190610:CDS |
| ACTGTTGGTGACGCAATCGG+GGG | 0.679445 | 8_1:+33716445 | Msa1190610:three_prime_UTR |
| ACCTTACAGGCAAAACCACG+CGG | 0.696789 | 8_1:-33715111 | None:intergenic |
| AGTCCGACAACCATTAACAG+TGG | 0.707722 | 8_1:+33714917 | Msa1190610:CDS |
| ATGCTGACAACATAAACACA+AGG | 0.717976 | 8_1:-33715661 | None:intergenic |
| CTGCTACACAGAAAATACAG+TGG | 0.721400 | 8_1:+33715334 | Msa1190610:CDS |
| CAAGACCAGAAGTGACAATG+GGG | 0.741804 | 8_1:-33714344 | None:intergenic |
| AGTCGACAACAATGTCCGTG+AGG | 0.748642 | 8_1:+33714401 | Msa1190610:CDS |
| ATACTTCCAAGGTTTCCGCG+TGG | 0.759575 | 8_1:+33715096 | Msa1190610:CDS |
| AAGACCAGAAGTGACAATGG+GGG | 0.759683 | 8_1:-33714343 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATTTATTTGATTAATATA+TGG | + | chr8_1:33713780-33713799 | Msa1190610:intron | 10.0% |
| !! | TGAGTTATAAAATTAATAAA+AGG | - | chr8_1:33713861-33713880 | None:intergenic | 10.0% |
| !! | AGTAAAATATATTGTTAAAA+CGG | - | chr8_1:33715302-33715321 | None:intergenic | 10.0% |
| !!! | TTTAATGATATTTATTGTTT+TGG | + | chr8_1:33715560-33715579 | Msa1190610:intron | 10.0% |
| !! | TTATAATAATTACCAGATAT+TGG | - | chr8_1:33714781-33714800 | None:intergenic | 15.0% |
| !! | AAGTATAAATAAAACAATTG+GGG | - | chr8_1:33715935-33715954 | None:intergenic | 15.0% |
| !! | CAAGTATAAATAAAACAATT+GGG | - | chr8_1:33715936-33715955 | None:intergenic | 15.0% |
| !! | ACAAGTATAAATAAAACAAT+TGG | - | chr8_1:33715937-33715956 | None:intergenic | 15.0% |
| !!! | ATTTATGTTTTGTATTGTTT+TGG | + | chr8_1:33717000-33717019 | Msa1190610:intron | 15.0% |
| !!! | ATGTTTTGAATGTATTCATT+CGG | + | chr8_1:33713615-33713634 | Msa1190610:intron | 20.0% |
| !! | TCTAATATACAAAAGAAGAT+TGG | + | chr8_1:33714507-33714526 | Msa1190610:intron | 20.0% |
| !!! | TATACTTTTATCTAGTACTA+AGG | + | chr8_1:33715797-33715816 | Msa1190610:intron | 20.0% |
| !! | CATATGTAAACTTCATAAAT+AGG | - | chr8_1:33715896-33715915 | None:intergenic | 20.0% |
| !!! | GTATGAAATTTTTATCATGA+TGG | + | chr8_1:33716009-33716028 | Msa1190610:intron | 20.0% |
| !! | AAAGAAATATTCATCATACA+TGG | - | chr8_1:33716723-33716742 | None:intergenic | 20.0% |
| !!! | TTAAGACTTTCTTTTTCTTT+GGG | - | chr8_1:33716848-33716867 | None:intergenic | 20.0% |
| !!! | ATTAAGACTTTCTTTTTCTT+TGG | - | chr8_1:33716849-33716868 | None:intergenic | 20.0% |
| !! | AAAGAAAAAGAAAGTCTTAA+TGG | + | chr8_1:33716848-33716867 | Msa1190610:intron | 20.0% |
| !! | AAAGAAAAGTCAGAATATTT+GGG | - | chr8_1:33716907-33716926 | None:intergenic | 20.0% |
| !! | AAAAGAAAAGTCAGAATATT+TGG | - | chr8_1:33716908-33716927 | None:intergenic | 20.0% |
| ! | TCAATTGATCTTTCACAAAT+AGG | + | chr8_1:33713362-33713381 | Msa1190610:five_prime_UTR | 25.0% |
| ! | TCAGATTTGTATGAATTCAT+CGG | + | chr8_1:33713435-33713454 | Msa1190610:intron | 25.0% |
| !!! | GTTTTGAATTTGTGTATGTT+CGG | + | chr8_1:33713558-33713577 | Msa1190610:intron | 25.0% |
| !! | TGAATTTCAACATGATGTTT+TGG | - | chr8_1:33713975-33713994 | None:intergenic | 25.0% |
| ! | AATTATAACTAAGAACACCT+CGG | - | chr8_1:33714027-33714046 | None:intergenic | 25.0% |
| ! | ATAATTGCGTTGTAAATTTG+TGG | + | chr8_1:33714041-33714060 | Msa1190610:intron | 25.0% |
| ! | CAGGTTAAATTATTGTAATC+TGG | + | chr8_1:33714066-33714085 | Msa1190610:intron | 25.0% |
| ! | ATTATTGTAATCTGGTAAGA+TGG | + | chr8_1:33714074-33714093 | Msa1190610:exon | 25.0% |
| ! | TTATTGTAATCTGGTAAGAT+GGG | + | chr8_1:33714075-33714094 | Msa1190610:exon | 25.0% |
| ! | ACAAACAAGAAAAATGAAGA+GGG | - | chr8_1:33714214-33714233 | None:intergenic | 25.0% |
| ! | TACAAACAAGAAAAATGAAG+AGG | - | chr8_1:33714215-33714234 | None:intergenic | 25.0% |
| !!! | ATATTTCCTGTTGATTTTTG+TGG | + | chr8_1:33714457-33714476 | Msa1190610:intron | 25.0% |
| ! | TAAACATATGACAATGATAC+CGG | - | chr8_1:33714700-33714719 | None:intergenic | 25.0% |
| ! | TAATAATTACCAGATATTGG+TGG | - | chr8_1:33714778-33714797 | None:intergenic | 25.0% |
| ! | ATAATAAAACTCTACTACCT+GGG | - | chr8_1:33715245-33715264 | None:intergenic | 25.0% |
| ! | TATTATGGTATGTTGCTAAT+AGG | + | chr8_1:33715259-33715278 | Msa1190610:intron | 25.0% |
| ! | AAACTTTATTGTGAATCTGT+TGG | + | chr8_1:33715357-33715376 | Msa1190610:CDS | 25.0% |
| ! | AACTTTATTGTGAATCTGTT+GGG | + | chr8_1:33715358-33715377 | Msa1190610:CDS | 25.0% |
| ! | AAAATTCTCTATTACCTAGA+GGG | - | chr8_1:33715457-33715476 | None:intergenic | 25.0% |
| !! | TAGAGAATTTTCTATTCAGT+TGG | + | chr8_1:33715466-33715485 | Msa1190610:intron | 25.0% |
| ! | GGCAAAGAATATAATCTAAT+AGG | - | chr8_1:33715513-33715532 | None:intergenic | 25.0% |
| !! | TTGAAGCTTTATATCAAACT+AGG | - | chr8_1:33715534-33715553 | None:intergenic | 25.0% |
| ! | CCTAAAAAATAATCAGCAAA+TGG | - | chr8_1:33715962-33715981 | None:intergenic | 25.0% |
| !!! | CCATTTGCTGATTATTTTTT+AGG | + | chr8_1:33715959-33715978 | Msa1190610:intron | 25.0% |
| !!! | CACTTTTTTAACACTGAAAT+TGG | + | chr8_1:33716083-33716102 | Msa1190610:intron | 25.0% |
| !! | TGATGAATATTTCTTTGAAG+AGG | + | chr8_1:33716727-33716746 | Msa1190610:three_prime_UTR | 25.0% |
| ! | TATTTCTTCAACAGAAATCT+TGG | + | chr8_1:33716814-33716833 | Msa1190610:intron | 25.0% |
| !! | TAAGACTTTCTTTTTCTTTG+GGG | - | chr8_1:33716847-33716866 | None:intergenic | 25.0% |
| ! | AAAAAGCAGTATTTCAAGAA+AGG | - | chr8_1:33716978-33716997 | None:intergenic | 25.0% |
| !! | TTCTAGATAGATATCCTTTT+GGG | + | chr8_1:33717053-33717072 | Msa1190610:three_prime_UTR | 25.0% |
| ! | TCATCATTGAACAAAATGTT+TGG | - | chr8_1:33717123-33717142 | None:intergenic | 25.0% |
| ACCCTTTCTTCTATTTGAAT+CGG | + | chr8_1:33713282-33713301 | Msa1190610:five_prime_UTR | 30.0% | |
| TCCGATTCAAATAGAAGAAA+GGG | - | chr8_1:33713286-33713305 | None:intergenic | 30.0% | |
| TTCCGATTCAAATAGAAGAA+AGG | - | chr8_1:33713287-33713306 | None:intergenic | 30.0% | |
| ! | TTGAGAGAGATTGAGAATTT+TGG | - | chr8_1:33713346-33713365 | None:intergenic | 30.0% |
| !! | TTAACGCTGTTTAATTTGTC+TGG | + | chr8_1:33713489-33713508 | Msa1190610:intron | 30.0% |
| ! | TTTTGTGTGTGCATGTATTT+AGG | + | chr8_1:33713588-33713607 | Msa1190610:intron | 30.0% |
| TGAATGTATTCATTCGGATA+CGG | + | chr8_1:33713621-33713640 | Msa1190610:intron | 30.0% | |
| ! | TTTTTCTAAACCACGTGTAT+GGG | + | chr8_1:33713717-33713736 | Msa1190610:intron | 30.0% |
| TCTGATACATGCATTGTATA+AGG | - | chr8_1:33713755-33713774 | None:intergenic | 30.0% | |
| TATATGACCTTCTCTCTAAA+CGG | - | chr8_1:33714180-33714199 | None:intergenic | 30.0% | |
| ! | TTGATTTTTGTGGTGCAATA+TGG | + | chr8_1:33714467-33714486 | Msa1190610:intron | 30.0% |
| TTACTCTTTGCTTTCAGAAA+CGG | + | chr8_1:33714543-33714562 | Msa1190610:intron | 30.0% | |
| ATACATTCCAGAAAGAACAT+AGG | - | chr8_1:33714616-33714635 | None:intergenic | 30.0% | |
| !! | TATGTTCTTTCTGGAATGTA+TGG | + | chr8_1:33714615-33714634 | Msa1190610:CDS | 30.0% |
| TATTTATTGCCACCAATATC+TGG | + | chr8_1:33714766-33714785 | Msa1190610:CDS | 30.0% | |
| GATGCAGTGAAAACATTATA+TGG | + | chr8_1:33714885-33714904 | Msa1190610:intron | 30.0% | |
| ! | CTTGGAAGTATATCACAATT+AGG | - | chr8_1:33715087-33715106 | None:intergenic | 30.0% |
| CTAATTGTGATATACTTCCA+AGG | + | chr8_1:33715085-33715104 | Msa1190610:CDS | 30.0% | |
| CATAATAAAACTCTACTACC+TGG | - | chr8_1:33715246-33715265 | None:intergenic | 30.0% | |
| !!! | CAGGTAGTAGAGTTTTATTA+TGG | + | chr8_1:33715244-33715263 | Msa1190610:intron | 30.0% |
| AAATGGAAGGAATCTGAATA+TGG | + | chr8_1:33715382-33715401 | Msa1190610:CDS | 30.0% | |
| GAAAATTCTCTATTACCTAG+AGG | - | chr8_1:33715458-33715477 | None:intergenic | 30.0% | |
| !! | AATCCAAGTTTTTGAGAACA+AGG | - | chr8_1:33715690-33715709 | None:intergenic | 30.0% |
| ! | AAAAGTGAATAGCCTTAAGA+CGG | - | chr8_1:33716070-33716089 | None:intergenic | 30.0% |
| !! | TCAATCATTTTTCAACTTGC+AGG | + | chr8_1:33716165-33716184 | Msa1190610:intron | 30.0% |
| TGTTACTGCAAGTAATATTC+CGG | - | chr8_1:33716338-33716357 | None:intergenic | 30.0% | |
| !!! | AATCACCTTTTTCTAAAGTG+AGG | + | chr8_1:33716552-33716571 | Msa1190610:three_prime_UTR | 30.0% |
| ! | TACTTCCTCACTTTAGAAAA+AGG | - | chr8_1:33716560-33716579 | None:intergenic | 30.0% |
| ! | TTTACAACGATATGCTACTT+TGG | - | chr8_1:33716583-33716602 | None:intergenic | 30.0% |
| !! | ATGACCATTTTTGCTTATCT+TGG | + | chr8_1:33716871-33716890 | Msa1190610:intron | 30.0% |
| !! | GTTCTAGATAGATATCCTTT+TGG | + | chr8_1:33717052-33717071 | Msa1190610:three_prime_UTR | 30.0% |
| CTCAAGTTAACATAGATCTT+GGG | - | chr8_1:33717089-33717108 | None:intergenic | 30.0% | |
| ACTCAAGTTAACATAGATCT+TGG | - | chr8_1:33717090-33717109 | None:intergenic | 30.0% | |
| CGCACTTTAAACATTTCAAA+TGG | + | chr8_1:33717154-33717173 | Msa1190610:three_prime_UTR | 30.0% | |
| ATTTCAAATGGATGATGACT+TGG | + | chr8_1:33717166-33717185 | Msa1190610:three_prime_UTR | 30.0% | |
| GATTCAAATAGAAGAAAGGG+TGG | - | chr8_1:33713283-33713302 | None:intergenic | 35.0% | |
| !!! | GAGATTGAGAATTTTGGTTC+CGG | - | chr8_1:33713340-33713359 | None:intergenic | 35.0% |
| ! | CTTTTTCTAAACCACGTGTA+TGG | + | chr8_1:33713716-33713735 | Msa1190610:intron | 35.0% |
| ATTTAAGAAACCCATACACG+TGG | - | chr8_1:33713730-33713749 | None:intergenic | 35.0% | |
| CATTATGTCCACATGTTTCT+TGG | + | chr8_1:33713927-33713946 | Msa1190610:intron | 35.0% | |
| CGAAATAACCAAGAAACATG+TGG | - | chr8_1:33713938-33713957 | None:intergenic | 35.0% | |
| !! | TTGATTTGATTTTGATGCCG+AGG | + | chr8_1:33714007-33714026 | Msa1190610:intron | 35.0% |
| ! | TTAGGGTACTTCACTTAGTA+AGG | + | chr8_1:33714106-33714125 | Msa1190610:CDS | 35.0% |
| TCAGGAAGGAATGATAGAAA+TGG | - | chr8_1:33714132-33714151 | None:intergenic | 35.0% | |
| AAAAATGAAGAGGGAGATCA+CGG | - | chr8_1:33714205-33714224 | None:intergenic | 35.0% | |
| TATGGAATACACTCAACAAC+AGG | + | chr8_1:33714249-33714268 | Msa1190610:CDS | 35.0% | |
| ATAACACGCATCCAATAGAA+TGG | - | chr8_1:33714282-33714301 | None:intergenic | 35.0% | |
| ATTGCACCACAAAAATCAAC+AGG | - | chr8_1:33714466-33714485 | None:intergenic | 35.0% | |
| ! | ATTTTTGTGGTGCAATATGG+TGG | + | chr8_1:33714470-33714489 | Msa1190610:intron | 35.0% |
| TTAGATGAGCTCCTTCAAAA+AGG | + | chr8_1:33714717-33714736 | Msa1190610:CDS | 35.0% | |
| CTTCAAAAAGGCTATGGTTT+GGG | + | chr8_1:33714729-33714748 | Msa1190610:CDS | 35.0% | |
| TAAGGAAGAGTTCTCTCATT+TGG | + | chr8_1:33714863-33714882 | Msa1190610:intron | 35.0% | |
| CTGTTCTAGTGATCAACAAA+TGG | - | chr8_1:33714982-33715001 | None:intergenic | 35.0% | |
| GAGGTGTAAAACAGTTTGAT+TGG | - | chr8_1:33715169-33715188 | None:intergenic | 35.0% | |
| GAAGTAGAGATTGGAAACAA+GGG | - | chr8_1:33715218-33715237 | None:intergenic | 35.0% | |
| TGAAGTAGAGATTGGAAACA+AGG | - | chr8_1:33715219-33715238 | None:intergenic | 35.0% | |
| ! | GTTTTACAGCTTAGCTGATA+TGG | + | chr8_1:33715610-33715629 | Msa1190610:intron | 35.0% |
| ATGCTGACAACATAAACACA+AGG | - | chr8_1:33715664-33715683 | None:intergenic | 35.0% | |
| AAAACTTGGATTGAAGTCTC+TGG | + | chr8_1:33715698-33715717 | Msa1190610:CDS | 35.0% | |
| TTAGTTATGAACATGTGCTG+AGG | - | chr8_1:33715842-33715861 | None:intergenic | 35.0% | |
| AAAACCAATCAGTTCACTCA+TGG | - | chr8_1:33716124-33716143 | None:intergenic | 35.0% | |
| !! | ACAGTATTGGCAGATTTCAT+GGG | + | chr8_1:33716295-33716314 | Msa1190610:CDS | 35.0% |
| !! | GTACTTTGAGACATTTGAGA+AGG | + | chr8_1:33716369-33716388 | Msa1190610:CDS | 35.0% |
| GTTCTTCCTTACTGTGTTAA+AGG | - | chr8_1:33716517-33716536 | None:intergenic | 35.0% | |
| ! | TAAAAGTACGCTTTACTCGT+TGG | - | chr8_1:33716663-33716682 | None:intergenic | 35.0% |
| TAACGTCAAGCCAATTGAAA+AGG | + | chr8_1:33716765-33716784 | Msa1190610:intron | 35.0% | |
| TCAAGCCAATTGAAAAGGAA+TGG | + | chr8_1:33716770-33716789 | Msa1190610:intron | 35.0% | |
| CAAGCCAATTGAAAAGGAAT+GGG | + | chr8_1:33716771-33716790 | Msa1190610:intron | 35.0% | |
| CAGTCCAAGATAAGCAAAAA+TGG | - | chr8_1:33716878-33716897 | None:intergenic | 35.0% | |
| GAAAAGTCAGAATATTTGGG+TGG | - | chr8_1:33716904-33716923 | None:intergenic | 35.0% | |
| !!! | ATTGTTTTGGTAGACATACG+AGG | + | chr8_1:33717013-33717032 | Msa1190610:intron | 35.0% |
| TCAAATAGAAGAAAGGGTGG+AGG | - | chr8_1:33713280-33713299 | None:intergenic | 40.0% | |
| !!! | TTGAGAATTTTGGTTCCGGT+GGG | - | chr8_1:33713336-33713355 | None:intergenic | 40.0% |
| !!! | ATTGAGAATTTTGGTTCCGG+TGG | - | chr8_1:33713337-33713356 | None:intergenic | 40.0% |
| GTGTGCAAATTGTTGATCTG+TGG | + | chr8_1:33713523-33713542 | Msa1190610:intron | 40.0% | |
| TTGATCTGTGGCGTGTAATT+AGG | + | chr8_1:33713535-33713554 | Msa1190610:intron | 40.0% | |
| TGATCTGTGGCGTGTAATTA+GGG | + | chr8_1:33713536-33713555 | Msa1190610:intron | 40.0% | |
| TTGTAATCTGGTAAGATGGG+AGG | + | chr8_1:33714078-33714097 | Msa1190610:exon | 40.0% | |
| !! | GAAAGTACCGTTTAGAGAGA+AGG | + | chr8_1:33714170-33714189 | Msa1190610:CDS | 40.0% |
| GTTGAGTGTATTCCATACAG+AGG | - | chr8_1:33714246-33714265 | None:intergenic | 40.0% | |
| TTCAAACCGTGGAACTGTTA+TGG | + | chr8_1:33714308-33714327 | Msa1190610:CDS | 40.0% | |
| ACAAGACCAGAAGTGACAAT+GGG | - | chr8_1:33714348-33714367 | None:intergenic | 40.0% | |
| TACAAGACCAGAAGTGACAA+TGG | - | chr8_1:33714349-33714368 | None:intergenic | 40.0% | |
| !!! | TGGTCTTGTAATGCAGCTTT+TGG | + | chr8_1:33714359-33714378 | Msa1190610:CDS | 40.0% |
| ! | TCTGGAATGTATGGTAGTGT+AGG | + | chr8_1:33714624-33714643 | Msa1190610:CDS | 40.0% |
| ! | CCAAACCATAGCCTTTTTGA+AGG | - | chr8_1:33714731-33714750 | None:intergenic | 40.0% |
| CCTTCAAAAAGGCTATGGTT+TGG | + | chr8_1:33714728-33714747 | Msa1190610:CDS | 40.0% | |
| !! | TTTTGTTTAGCAGTTGCGAC+AGG | - | chr8_1:33714816-33714835 | None:intergenic | 40.0% |
| GTTGATCACTAGAACAGACA+AGG | + | chr8_1:33714985-33715004 | Msa1190610:CDS | 40.0% | |
| GCTAGCAGATTTGTGACATT+GGG | - | chr8_1:33715049-33715068 | None:intergenic | 40.0% | |
| AGCTAGCAGATTTGTGACAT+TGG | - | chr8_1:33715050-33715069 | None:intergenic | 40.0% | |
| !! | AAGAATAATGGGCATGTTGG+AGG | - | chr8_1:33715188-33715207 | None:intergenic | 40.0% |
| !! | CTGAAGAATAATGGGCATGT+TGG | - | chr8_1:33715191-33715210 | None:intergenic | 40.0% |
| AGGGCAGACTGAAGAATAAT+GGG | - | chr8_1:33715199-33715218 | None:intergenic | 40.0% | |
| AAGGGCAGACTGAAGAATAA+TGG | - | chr8_1:33715200-33715219 | None:intergenic | 40.0% | |
| CTGGGAAATGAAGTAGAGAT+TGG | - | chr8_1:33715227-33715246 | None:intergenic | 40.0% | |
| CAATCTCTACTTCATTTCCC+AGG | + | chr8_1:33715225-33715244 | Msa1190610:CDS | 40.0% | |
| CTGCTACACAGAAAATACAG+TGG | + | chr8_1:33715334-33715353 | Msa1190610:CDS | 40.0% | |
| TTGTGAATCTGTTGGGCAAA+TGG | + | chr8_1:33715365-33715384 | Msa1190610:CDS | 40.0% | |
| TGGAAGGAATCTGAATATGG+AGG | + | chr8_1:33715385-33715404 | Msa1190610:CDS | 40.0% | |
| AAGGAATCTGAATATGGAGG+TGG | + | chr8_1:33715388-33715407 | Msa1190610:CDS | 40.0% | |
| ACTATATAACTGCACCCTCT+AGG | + | chr8_1:33715440-33715459 | Msa1190610:CDS | 40.0% | |
| GAACAATGCATGGAAAGGAT+TGG | - | chr8_1:33715639-33715658 | None:intergenic | 40.0% | |
| AGGTAGAACAATGCATGGAA+AGG | - | chr8_1:33715644-33715663 | None:intergenic | 40.0% | |
| ACACAAGGTAGAACAATGCA+TGG | - | chr8_1:33715649-33715668 | None:intergenic | 40.0% | |
| ! | GTGCCTTGTTCTCAAAAACT+TGG | + | chr8_1:33715684-33715703 | Msa1190610:CDS | 40.0% |
| AATCTGTACCTTCAACTGCT+TGG | - | chr8_1:33715744-33715763 | None:intergenic | 40.0% | |
| ACTTCATAAATAGGTCACGC+TGG | - | chr8_1:33715887-33715906 | None:intergenic | 40.0% | |
| !! | TGCAGTTGATAACCGTCTTA+AGG | + | chr8_1:33716055-33716074 | Msa1190610:intron | 40.0% |
| AAGTCCATGAGTGAACTGAT+TGG | + | chr8_1:33716117-33716136 | Msa1190610:intron | 40.0% | |
| CAACTTGCAGGAACAACAAA+TGG | + | chr8_1:33716177-33716196 | Msa1190610:intron | 40.0% | |
| ! | GAACAACAAATGGTAATGCC+TGG | + | chr8_1:33716187-33716206 | Msa1190610:CDS | 40.0% |
| ! | AAATGGTAATGCCTGGTCAT+CGG | + | chr8_1:33716194-33716213 | Msa1190610:CDS | 40.0% |
| AAATTTGATTCCCGATGACC+AGG | - | chr8_1:33716208-33716227 | None:intergenic | 40.0% | |
| GCATTTGGAGGAATGTGTAT+TGG | + | chr8_1:33716265-33716284 | Msa1190610:CDS | 40.0% | |
| GAAATCTGCCAATACTGTCA+GGG | - | chr8_1:33716293-33716312 | None:intergenic | 40.0% | |
| TGAAATCTGCCAATACTGTC+AGG | - | chr8_1:33716294-33716313 | None:intergenic | 40.0% | |
| !! | GACAGTATTGGCAGATTTCA+TGG | + | chr8_1:33716294-33716313 | Msa1190610:CDS | 40.0% |
| !!! | AGTTTTGGGGTATTGAGGAA+TGG | + | chr8_1:33716483-33716502 | Msa1190610:three_prime_UTR | 40.0% |
| GTAGGTCCTTTAACACAGTA+AGG | + | chr8_1:33716508-33716527 | Msa1190610:three_prime_UTR | 40.0% | |
| !! | GACTTTCTTTTTCTTTGGGG+AGG | - | chr8_1:33716844-33716863 | None:intergenic | 40.0% |
| !! | CGAGGTGGATTTTCGGTTTT+AGG | + | chr8_1:33713656-33713675 | Msa1190610:intron | 45.0% |
| GCGTTGTAAATTTGTGGTGC+AGG | + | chr8_1:33714047-33714066 | Msa1190610:intron | 45.0% | |
| TAATCTGGTAAGATGGGAGG+TGG | + | chr8_1:33714081-33714100 | Msa1190610:exon | 45.0% | |
| AATCTGGTAAGATGGGAGGT+GGG | + | chr8_1:33714082-33714101 | Msa1190610:exon | 45.0% | |
| ! | TAAGATGGGAGGTGGGTTTA+GGG | + | chr8_1:33714089-33714108 | Msa1190610:exon | 45.0% |
| TGTAGTCAGCTTCCTCTGTA+TGG | + | chr8_1:33714231-33714250 | Msa1190610:CDS | 45.0% | |
| CAGGTGCAGATCCATTCTAT+TGG | + | chr8_1:33714268-33714287 | Msa1190610:CDS | 45.0% | |
| GTTATCCTTGCTTCAAACCG+TGG | + | chr8_1:33714297-33714316 | Msa1190610:CDS | 45.0% | |
| CAAGCTCCATAACAGTTCCA+CGG | - | chr8_1:33714317-33714336 | None:intergenic | 45.0% | |
| AAGACCAGAAGTGACAATGG+GGG | - | chr8_1:33714346-33714365 | None:intergenic | 45.0% | |
| CAAGACCAGAAGTGACAATG+GGG | - | chr8_1:33714347-33714366 | None:intergenic | 45.0% | |
| ! | CTTGTAATGCAGCTTTTGGC+TGG | + | chr8_1:33714363-33714382 | Msa1190610:CDS | 45.0% |
| ! | CATCTTGATAGCTGTTGGAG+AGG | + | chr8_1:33714584-33714603 | Msa1190610:CDS | 45.0% |
| GCTGTTGCCTATGTTCTTTC+TGG | + | chr8_1:33714606-33714625 | Msa1190610:CDS | 45.0% | |
| AAAAGAGCTGGAGGATGATG+AGG | - | chr8_1:33714674-33714693 | None:intergenic | 45.0% | |
| !!! | ATCCTCCAGCTCTTTTTTGC+CGG | + | chr8_1:33714678-33714697 | Msa1190610:CDS | 45.0% |
| TGATACCGGCAAAAAAGAGC+TGG | - | chr8_1:33714686-33714705 | None:intergenic | 45.0% | |
| GAGCTCCTTCAAAAAGGCTA+TGG | + | chr8_1:33714723-33714742 | Msa1190610:CDS | 45.0% | |
| ! | AAAGGCTATGGTTTGGGATC+TGG | + | chr8_1:33714735-33714754 | Msa1190610:CDS | 45.0% |
| AGTCCGACAACCATTAACAG+TGG | + | chr8_1:33714917-33714936 | Msa1190610:CDS | 45.0% | |
| CGACCACTGTTAATGGTTGT+CGG | - | chr8_1:33714923-33714942 | None:intergenic | 45.0% | |
| CGACAACCATTAACAGTGGT+CGG | + | chr8_1:33714921-33714940 | Msa1190610:CDS | 45.0% | |
| GACAACCATTAACAGTGGTC+GGG | + | chr8_1:33714922-33714941 | Msa1190610:CDS | 45.0% | |
| ACAACCATTAACAGTGGTCG+GGG | + | chr8_1:33714923-33714942 | Msa1190610:CDS | 45.0% | |
| GAATCTGTTGGGCAAATGGA+AGG | + | chr8_1:33715369-33715388 | Msa1190610:CDS | 45.0% | |
| TAGTATGCAATGCCACCAAC+AGG | - | chr8_1:33715424-33715443 | None:intergenic | 45.0% | |
| AGATGTTGCCAAGCAGTTGA+AGG | + | chr8_1:33715733-33715752 | Msa1190610:CDS | 45.0% | |
| ! | AATGGTAATGCCTGGTCATC+GGG | + | chr8_1:33716195-33716214 | Msa1190610:CDS | 45.0% |
| CAGCAGCAGTGGGAATATAT+CGG | - | chr8_1:33716246-33716265 | None:intergenic | 45.0% | |
| ! | TATTGGTGCCCTGACAGTAT+TGG | + | chr8_1:33716282-33716301 | Msa1190610:CDS | 45.0% |
| GCAGATTTCATGGGTGCAAT+TGG | + | chr8_1:33716304-33716323 | Msa1190610:CDS | 45.0% | |
| ! | TTCATGGGTGCAATTGGTTC+CGG | + | chr8_1:33716310-33716329 | Msa1190610:CDS | 45.0% |
| TGCAAGTAATATTCCGGTCC+CGG | - | chr8_1:33716332-33716351 | None:intergenic | 45.0% | |
| !! | ATCACTGTTGGTGACGCAAT+CGG | + | chr8_1:33716442-33716461 | Msa1190610:three_prime_UTR | 45.0% |
| CCTCAATACCCCAAAACTGT+GGG | - | chr8_1:33716481-33716500 | None:intergenic | 45.0% | |
| TCCTCAATACCCCAAAACTG+TGG | - | chr8_1:33716482-33716501 | None:intergenic | 45.0% | |
| !! | GGGTATTGAGGAATGGAAGT+AGG | + | chr8_1:33716490-33716509 | Msa1190610:three_prime_UTR | 45.0% |
| ! | CGAGCCCATTCCTTTTCAAT+TGG | - | chr8_1:33716778-33716797 | None:intergenic | 45.0% |
| CATACGAGGATCTTGCTCTT+TGG | + | chr8_1:33717027-33717046 | Msa1190610:three_prime_UTR | 45.0% | |
| !!! | TTAGATTTTTTTATATAAAA+AGG | - | chr8_1:33714846-33714865 | None:intergenic | 5.0% |
| !!! | TTTTTATATAAAAAAATCTA+AGG | + | chr8_1:33714845-33714864 | Msa1190610:intron | 5.0% |
| CAGATCCACTTCTTACCCAC+CGG | + | chr8_1:33713318-33713337 | Msa1190610:five_prime_UTR | 50.0% | |
| CATTCGGATACGGATCTAGC+TGG | + | chr8_1:33713631-33713650 | Msa1190610:intron | 50.0% | |
| ATACGGATCTAGCTGGATCG+AGG | + | chr8_1:33713638-33713657 | Msa1190610:intron | 50.0% | |
| !! | GCTGGATCGAGGTGGATTTT+CGG | + | chr8_1:33713649-33713668 | Msa1190610:intron | 50.0% |
| ! | GTAAGATGGGAGGTGGGTTT+AGG | + | chr8_1:33714088-33714107 | Msa1190610:exon | 50.0% |
| CCTTCCTGAAGTTCAGACTG+CGG | + | chr8_1:33714143-33714162 | Msa1190610:CDS | 50.0% | |
| ! | CAGTTCCACGGTTTGAAGCA+AGG | - | chr8_1:33714305-33714324 | None:intergenic | 50.0% |
| CGTGGAACTGTTATGGAGCT+TGG | + | chr8_1:33714315-33714334 | Msa1190610:CDS | 50.0% | |
| ! | ATCACCCCCATTGTCACTTC+TGG | + | chr8_1:33714339-33714358 | Msa1190610:CDS | 50.0% |
| AGTCGACAACAATGTCCGTG+AGG | + | chr8_1:33714401-33714420 | Msa1190610:CDS | 50.0% | |
| ! | ACAAGAGAGCACGATCCTCA+CGG | - | chr8_1:33714419-33714438 | None:intergenic | 50.0% |
| AACGGTGCACAGAAGCTACT+CGG | + | chr8_1:33714561-33714580 | Msa1190610:CDS | 50.0% | |
| ! | CTCGGCATCTTGATAGCTGT+TGG | + | chr8_1:33714579-33714598 | Msa1190610:CDS | 50.0% |
| ! | TATGGTAGTGTAGGCCAGCT+TGG | + | chr8_1:33714633-33714652 | Msa1190610:CDS | 50.0% |
| TACCGGCAAAAAAGAGCTGG+AGG | - | chr8_1:33714683-33714702 | None:intergenic | 50.0% | |
| CCGGTAAAATGCTTCCCGAA+GGG | - | chr8_1:33715017-33715036 | None:intergenic | 50.0% | |
| !!! | CCCTTCGGGAAGCATTTTAC+CGG | + | chr8_1:33715014-33715033 | Msa1190610:CDS | 50.0% |
| TGACATTGGGCAGATTCTGC+CGG | - | chr8_1:33715036-33715055 | None:intergenic | 50.0% | |
| ATACTTCCAAGGTTTCCGCG+TGG | + | chr8_1:33715096-33715115 | Msa1190610:CDS | 50.0% | |
| ACCTTACAGGCAAAACCACG+CGG | - | chr8_1:33715114-33715133 | None:intergenic | 50.0% | |
| CGGGCATTCTTTGACCTTAC+AGG | - | chr8_1:33715127-33715146 | None:intergenic | 50.0% | |
| GTAAGGTCAAAGAATGCCCG+TGG | + | chr8_1:33715127-33715146 | Msa1190610:CDS | 50.0% | |
| ATATGAACCCTGCTGTCCAC+GGG | - | chr8_1:33715146-33715165 | None:intergenic | 50.0% | |
| GATATGAACCCTGCTGTCCA+CGG | - | chr8_1:33715147-33715166 | None:intergenic | 50.0% | |
| GGTGGTCACTCTATTCCTGT+TGG | + | chr8_1:33715406-33715425 | Msa1190610:CDS | 50.0% | |
| GGTCACTCTATTCCTGTTGG+TGG | + | chr8_1:33715409-33715428 | Msa1190610:CDS | 50.0% | |
| ATTCCCACTGCTGCTGCATT+TGG | + | chr8_1:33716250-33716269 | Msa1190610:CDS | 50.0% | |
| ! | TCATGGGTGCAATTGGTTCC+GGG | + | chr8_1:33716311-33716330 | Msa1190610:CDS | 50.0% |
| ACCAAAGAAACCAAGCTCGC+TGG | - | chr8_1:33716401-33716420 | None:intergenic | 50.0% | |
| CTCTGCTCAGTCATCACTGT+TGG | + | chr8_1:33716430-33716449 | Msa1190610:three_prime_UTR | 50.0% | |
| !! | TCACTGTTGGTGACGCAATC+GGG | + | chr8_1:33716443-33716462 | Msa1190610:three_prime_UTR | 50.0% |
| ! | TTATCCCGCACCCACAGTTT+TGG | + | chr8_1:33716468-33716487 | Msa1190610:three_prime_UTR | 50.0% |
| ! | TATCCCGCACCCACAGTTTT+GGG | + | chr8_1:33716469-33716488 | Msa1190610:three_prime_UTR | 50.0% |
| ATACCCCAAAACTGTGGGTG+CGG | - | chr8_1:33716476-33716495 | None:intergenic | 50.0% | |
| !!! | CCCACAGTTTTGGGGTATTG+AGG | + | chr8_1:33716478-33716497 | Msa1190610:three_prime_UTR | 50.0% |
| ! | GAATGGGCTCGCAGAATTGA+GGG | + | chr8_1:33716787-33716806 | Msa1190610:intron | 50.0% |
| TGGGACAAGAGCTACCCAAA+AGG | - | chr8_1:33717070-33717089 | None:intergenic | 50.0% | |
| TGGTTCCGGTGGGTAAGAAG+TGG | - | chr8_1:33713326-33713345 | None:intergenic | 55.0% | |
| CCGCAGTCTGAACTTCAGGA+AGG | - | chr8_1:33714146-33714165 | None:intergenic | 55.0% | |
| CTGTCCGCAGTCTGAACTTC+AGG | - | chr8_1:33714150-33714169 | None:intergenic | 55.0% | |
| CTGAAGTTCAGACTGCGGAC+AGG | + | chr8_1:33714148-33714167 | Msa1190610:CDS | 55.0% | |
| TAGTGTAGGCCAGCTTGGAG+TGG | + | chr8_1:33714638-33714657 | Msa1190610:CDS | 55.0% | |
| AGTGTAGGCCAGCTTGGAGT+GGG | + | chr8_1:33714639-33714658 | Msa1190610:CDS | 55.0% | |
| TGGCATTTCCCACTCCAAGC+TGG | - | chr8_1:33714650-33714669 | None:intergenic | 55.0% | |
| GAGCTGGAGGATGATGAGGA+TGG | - | chr8_1:33714670-33714689 | None:intergenic | 55.0% | |
| AGCTCCCCGACCACTGTTAA+TGG | - | chr8_1:33714930-33714949 | None:intergenic | 55.0% | |
| TGGTCGGGGAGCTGAATTTG+AGG | + | chr8_1:33714937-33714956 | Msa1190610:CDS | 55.0% | |
| GGTCGGGGAGCTGAATTTGA+GGG | + | chr8_1:33714938-33714957 | Msa1190610:CDS | 55.0% | |
| CAGACAAGGTTCGTGCCCTT+CGG | + | chr8_1:33714999-33715018 | Msa1190610:CDS | 55.0% | |
| AGACAAGGTTCGTGCCCTTC+GGG | + | chr8_1:33715000-33715019 | Msa1190610:CDS | 55.0% | |
| GCCGGTAAAATGCTTCCCGA+AGG | - | chr8_1:33715018-33715037 | None:intergenic | 55.0% | |
| GCAAAACCACGCGGAAACCT+TGG | - | chr8_1:33715105-33715124 | None:intergenic | 55.0% | |
| !! | TCCGCGTGGTTTTGCCTGTA+AGG | + | chr8_1:33715110-33715129 | Msa1190610:CDS | 55.0% |
| AAAGAATGCCCGTGGACAGC+AGG | + | chr8_1:33715135-33715154 | Msa1190610:CDS | 55.0% | |
| AAGAATGCCCGTGGACAGCA+GGG | + | chr8_1:33715136-33715155 | Msa1190610:CDS | 55.0% | |
| CCTCCAAATGCAGCAGCAGT+GGG | - | chr8_1:33716256-33716275 | None:intergenic | 55.0% | |
| TCCTCCAAATGCAGCAGCAG+TGG | - | chr8_1:33716257-33716276 | None:intergenic | 55.0% | |
| AAGGAAAGAGCCAGCGAGCT+TGG | + | chr8_1:33716388-33716407 | Msa1190610:CDS | 55.0% | |
| GCCAGCGAGCTTGGTTTCTT+TGG | + | chr8_1:33716397-33716416 | Msa1190610:CDS | 55.0% | |
| !! | CACTGTTGGTGACGCAATCG+GGG | + | chr8_1:33716444-33716463 | Msa1190610:three_prime_UTR | 55.0% |
| !! | ACTGTTGGTGACGCAATCGG+GGG | + | chr8_1:33716445-33716464 | Msa1190610:three_prime_UTR | 55.0% |
| ! | ATCCCGCACCCACAGTTTTG+GGG | + | chr8_1:33716470-33716489 | Msa1190610:three_prime_UTR | 55.0% |
| TACCCCAAAACTGTGGGTGC+GGG | - | chr8_1:33716475-33716494 | None:intergenic | 55.0% | |
| ! | GGAATGGGCTCGCAGAATTG+AGG | + | chr8_1:33716786-33716805 | Msa1190610:intron | 55.0% |
| CGGGTGAGAGAAGCTAAAGC+TGG | - | chr8_1:33717196-33717215 | None:intergenic | 55.0% | |
| CGGATCTAGCTGGATCGAGG+TGG | + | chr8_1:33713641-33713660 | Msa1190610:intron | 60.0% | |
| CCCACTGCTGCTGCATTTGG+AGG | + | chr8_1:33716253-33716272 | Msa1190610:CDS | 60.0% | |
| ! | GGTGCAATTGGTTCCGGGAC+CGG | + | chr8_1:33716316-33716335 | Msa1190610:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 33713271 | 33717227 | 33713271 | ID=Msa1190610;Name=Msa1190610 |
| chr8_1 | mRNA | 33713271 | 33717227 | 33713271 | ID=Msa1190610-mRNA-1;Parent=Msa1190610;Name=Msa1190610-mRNA-1;_AED=0.09;_eAED=0.09;_QI=137|1|1|1|0.71|0.5|8|543|476 |
| chr8_1 | exon | 33713271 | 33713383 | 33713271 | ID=Msa1190610-mRNA-1:exon:11338;Parent=Msa1190610-mRNA-1 |
| chr8_1 | exon | 33714069 | 33714436 | 33714069 | ID=Msa1190610-mRNA-1:exon:11339;Parent=Msa1190610-mRNA-1 |
| chr8_1 | exon | 33714560 | 33714787 | 33714560 | ID=Msa1190610-mRNA-1:exon:11340;Parent=Msa1190610-mRNA-1 |
| chr8_1 | exon | 33714892 | 33715246 | 33714892 | ID=Msa1190610-mRNA-1:exon:11341;Parent=Msa1190610-mRNA-1 |
| chr8_1 | exon | 33715334 | 33715461 | 33715334 | ID=Msa1190610-mRNA-1:exon:11342;Parent=Msa1190610-mRNA-1 |
| chr8_1 | exon | 33715619 | 33715754 | 33715619 | ID=Msa1190610-mRNA-1:exon:11343;Parent=Msa1190610-mRNA-1 |
| chr8_1 | exon | 33716187 | 33716763 | 33716187 | ID=Msa1190610-mRNA-1:exon:11344;Parent=Msa1190610-mRNA-1 |
| chr8_1 | exon | 33717022 | 33717227 | 33717022 | ID=Msa1190610-mRNA-1:exon:11345;Parent=Msa1190610-mRNA-1 |
| chr8_1 | five_prime_UTR | 33713271 | 33713383 | 33713271 | ID=Msa1190610-mRNA-1:five_prime_utr;Parent=Msa1190610-mRNA-1 |
| chr8_1 | five_prime_UTR | 33714069 | 33714092 | 33714069 | ID=Msa1190610-mRNA-1:five_prime_utr;Parent=Msa1190610-mRNA-1 |
| chr8_1 | CDS | 33714093 | 33714436 | 33714093 | ID=Msa1190610-mRNA-1:cds;Parent=Msa1190610-mRNA-1 |
| chr8_1 | CDS | 33714560 | 33714787 | 33714560 | ID=Msa1190610-mRNA-1:cds;Parent=Msa1190610-mRNA-1 |
| chr8_1 | CDS | 33714892 | 33715246 | 33714892 | ID=Msa1190610-mRNA-1:cds;Parent=Msa1190610-mRNA-1 |
| chr8_1 | CDS | 33715334 | 33715461 | 33715334 | ID=Msa1190610-mRNA-1:cds;Parent=Msa1190610-mRNA-1 |
| chr8_1 | CDS | 33715619 | 33715754 | 33715619 | ID=Msa1190610-mRNA-1:cds;Parent=Msa1190610-mRNA-1 |
| chr8_1 | CDS | 33716187 | 33716426 | 33716187 | ID=Msa1190610-mRNA-1:cds;Parent=Msa1190610-mRNA-1 |
| chr8_1 | three_prime_UTR | 33716427 | 33716763 | 33716427 | ID=Msa1190610-mRNA-1:three_prime_utr;Parent=Msa1190610-mRNA-1 |
| chr8_1 | three_prime_UTR | 33717022 | 33717227 | 33717022 | ID=Msa1190610-mRNA-1:three_prime_utr;Parent=Msa1190610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
