Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241780 | XP_003628041.1 | 90.792 | 543 | 43 | 4 | 34 | 570 | 8 | 549 | 0.0 | 966 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241780 | sp|Q5E915|RBBP_ARATH | 64.839 | 529 | 174 | 7 | 34 | 556 | 8 | 530 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241780 | Q1S5M0 | 90.792 | 543 | 43 | 4 | 34 | 570 | 8 | 549 | 0.0 | 966 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0101180 | Msa1241780 | 0.817470 | 3.242522e-52 | -8.615850e-47 |
| Msa0166750 | Msa1241780 | 0.813927 | 1.997638e-51 | -8.615850e-47 |
| Msa0174000 | Msa1241780 | 0.801002 | 1.105848e-48 | -8.615850e-47 |
| Msa1241780 | Msa1271580 | 0.805184 | 1.509154e-49 | -8.615850e-47 |
| Msa0384880 | Msa1241780 | 0.809304 | 2.021322e-50 | -8.615850e-47 |
| Msa0434770 | Msa1241780 | 0.802985 | 4.326829e-49 | -8.615850e-47 |
| Msa1083880 | Msa1241780 | 0.808616 | 2.837637e-50 | -8.615850e-47 |
| Msa0262480 | Msa1241780 | 0.802331 | 5.902940e-49 | -8.615850e-47 |
| Msa0291520 | Msa1241780 | 0.809927 | 1.485221e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241780 | MtrunA17_Chr8g0354361 | 90.792 | 543 | 43 | 4 | 34 | 570 | 8 | 549 | 0.0 | 966 |
| Msa1241780 | MtrunA17_Chr8g0355681 | 87.132 | 544 | 62 | 5 | 34 | 570 | 8 | 550 | 0.0 | 916 |
| Msa1241780 | MtrunA17_Chr8g0355701 | 84.160 | 524 | 72 | 4 | 50 | 570 | 1 | 516 | 0.0 | 855 |
| Msa1241780 | MtrunA17_Chr5g0429441 | 77.381 | 84 | 19 | 0 | 62 | 145 | 5 | 88 | 9.17e-38 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241780 | AT3G21060.1 | 64.839 | 529 | 174 | 7 | 34 | 556 | 8 | 530 | 0.0 | 645 |
Find 151 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACCACTTCTTCCGAAAA+TGG | 0.235642 | 8_2:-25525189 | None:intergenic |
| TGAGTGGAATAGTTTATATC+TGG | 0.238272 | 8_2:+25524768 | Msa1241780:CDS |
| AGAGAAGGTGTTGGAGTTGC+AGG | 0.281426 | 8_2:+25525524 | Msa1241780:CDS |
| CTCTCCATCACCACTGAAAC+AGG | 0.282312 | 8_2:-25524594 | None:intergenic |
| TTCATATCCTTGCAGGTAAA+AGG | 0.287426 | 8_2:+25524976 | Msa1241780:intron |
| AAATCAATCATATTTATATA+TGG | 0.293497 | 8_2:-25525775 | None:intergenic |
| TCCTCAATCTCTTTGAAATC+AGG | 0.297441 | 8_2:-25524827 | None:intergenic |
| CCAGTTCTCAATGTAATCTT+TGG | 0.299795 | 8_2:-25524792 | None:intergenic |
| AAGAACCAAAACTAAATCTT+TGG | 0.299874 | 8_2:+25525584 | Msa1241780:CDS |
| GACTCTGGGCAGAGTGGATT+AGG | 0.301310 | 8_2:-25522985 | None:intergenic |
| ATGATGGAAGCTGTGTTATC+TGG | 0.306253 | 8_2:+25523829 | Msa1241780:CDS |
| CTGCAGTTTCTGTCAAGGTT+TGG | 0.335747 | 8_2:+25523033 | Msa1241780:CDS |
| CAAGGTTTGGAGTGTGTATA+AGG | 0.343333 | 8_2:+25523046 | Msa1241780:CDS |
| CTCCCATCACCAGTATTTGT+TGG | 0.346822 | 8_2:+25523904 | Msa1241780:CDS |
| GATGCCACGCTAAATCAATA+AGG | 0.351990 | 8_2:-25524715 | None:intergenic |
| ATATATAAATATGATTGATT+TGG | 0.359387 | 8_2:+25525777 | Msa1241780:three_prime_UTR |
| AGTGCTCTAACTTCATCTTT+TGG | 0.360566 | 8_2:-25524446 | None:intergenic |
| GGTGATGGAGAGTGGGTTGT+TGG | 0.362512 | 8_2:+25524605 | Msa1241780:CDS |
| ATCAACCAAAGATTTAGTTT+TGG | 0.365207 | 8_2:-25525589 | None:intergenic |
| TGCAGAAATTGAGACCTTAC+AGG | 0.367476 | 8_2:-25523015 | None:intergenic |
| GTCGATAAAACCTCAAAATC+TGG | 0.370887 | 8_2:+25525555 | Msa1241780:CDS |
| TAGAAAGTTCTTCAAAGAAT+GGG | 0.371053 | 8_2:+25525145 | Msa1241780:CDS |
| GAATGACAGCAGATTGTAAA+TGG | 0.372037 | 8_2:+25525654 | Msa1241780:exon |
| TTACTAGCTCGTCTTCATCC+TGG | 0.377800 | 8_2:+25524035 | Msa1241780:CDS |
| GGCATAACATTACCTTCAAC+TGG | 0.379825 | 8_2:-25525243 | None:intergenic |
| AGTGCCATGGTTCCTATCTC+TGG | 0.400180 | 8_2:+25524323 | Msa1241780:CDS |
| ACACTTTGACCAACAAATAC+TGG | 0.409133 | 8_2:-25523913 | None:intergenic |
| ACCGAGGTTCTCTTTAAGTT+CGG | 0.410950 | 8_2:-25524471 | None:intergenic |
| TACTAGCTCGTCTTCATCCT+GGG | 0.415673 | 8_2:+25524036 | Msa1241780:CDS |
| ACTCTGGGCAGAGTGGATTA+GGG | 0.415714 | 8_2:-25522984 | None:intergenic |
| GAACACTTGTTGCGTGAGGC+AGG | 0.420528 | 8_2:-25524182 | None:intergenic |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 8_2:-25524694 | None:intergenic |
| TTAGAAAGTTCTTCAAAGAA+TGG | 0.426375 | 8_2:+25525144 | Msa1241780:CDS |
| AAAGAAACAGATACAACAAT+TGG | 0.427149 | 8_2:-25524746 | None:intergenic |
| ATCCCATACCCTGGGTATCC+AGG | 0.428925 | 8_2:-25523086 | None:intergenic |
| CAAAGAGATTGAGGAAAATG+AGG | 0.433376 | 8_2:+25524835 | Msa1241780:CDS |
| TTGTTCAGGTACATCGCGAC+AGG | 0.437991 | 8_2:-25525109 | None:intergenic |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 8_2:+25524844 | Msa1241780:CDS |
| ACTACTGAACCACCAGAGAT+AGG | 0.444412 | 8_2:-25524335 | None:intergenic |
| CTTGTAATTGACGGTAAAGA+TGG | 0.444805 | 8_2:+25524293 | Msa1241780:CDS |
| GGTGAAATTCTTGTAATTGA+CGG | 0.445204 | 8_2:+25524284 | Msa1241780:CDS |
| TCGGAAGAAGTGGTAGCAAC+TGG | 0.445844 | 8_2:+25525195 | Msa1241780:CDS |
| TTGTTGCGTGAGGCAGGGTT+TGG | 0.448991 | 8_2:-25524176 | None:intergenic |
| GGGATGTCATGAGTGGTAAA+AGG | 0.453340 | 8_2:+25523982 | Msa1241780:CDS |
| GATGAAGACGAGCTAGTAAA+GGG | 0.455276 | 8_2:-25524031 | None:intergenic |
| TTTGAATCCTGACACTGATA+AGG | 0.456843 | 8_2:+25524886 | Msa1241780:CDS |
| ACTCAAATGATAGAGTAATC+AGG | 0.461981 | 8_2:+25524402 | Msa1241780:CDS |
| AATTTCTGCAGTTTCTGTCA+AGG | 0.468171 | 8_2:+25523028 | Msa1241780:CDS |
| GATGGAGAGTGGGTTGTTGG+TGG | 0.468537 | 8_2:+25524608 | Msa1241780:CDS |
| CCAAAGATTACATTGAGAAC+TGG | 0.469225 | 8_2:+25524792 | Msa1241780:CDS |
| GAGGGAAAGTCTAGGTCTCC+TGG | 0.470236 | 8_2:+25523068 | Msa1241780:CDS |
| TCACATACCTTATCAGTGTC+AGG | 0.470513 | 8_2:-25524893 | None:intergenic |
| CTCAAAACCATCTCTCTGCT+TGG | 0.473149 | 8_2:+25524061 | Msa1241780:CDS |
| TCCTGATTTCAAAGAGATTG+AGG | 0.473999 | 8_2:+25524826 | Msa1241780:CDS |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 8_2:+25524645 | Msa1241780:CDS |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 8_2:+25523813 | Msa1241780:intron |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 8_2:+25524680 | Msa1241780:CDS |
| GAGTGGAATAGTTTATATCT+GGG | 0.493993 | 8_2:+25524769 | Msa1241780:CDS |
| ATGCAATCACGAAGGTGCAC+TGG | 0.494469 | 8_2:+25524564 | Msa1241780:CDS |
| TAAAGAACATTGTATTCAGC+AGG | 0.503259 | 8_2:+25524357 | Msa1241780:CDS |
| TGACCAACAAATACTGGTGA+TGG | 0.505055 | 8_2:-25523907 | None:intergenic |
| ATGCCACGCTAAATCAATAA+GGG | 0.511908 | 8_2:-25524714 | None:intergenic |
| GTTGAGAAGTTGAAGGCTGC+AGG | 0.512395 | 8_2:+25524506 | Msa1241780:CDS |
| CTTACAGGGTAGTTAGACTC+TGG | 0.514277 | 8_2:-25523000 | None:intergenic |
| CAGAGTCTAACTACCCTGTA+AGG | 0.518680 | 8_2:+25523001 | Msa1241780:CDS |
| GTTGTATCTGTTTCTTTGAG+TGG | 0.520343 | 8_2:+25524752 | Msa1241780:CDS |
| ACATCGCGACAGGGAGATGC+TGG | 0.520821 | 8_2:-25525099 | None:intergenic |
| GGATGAAGACGAGCTAGTAA+AGG | 0.521076 | 8_2:-25524032 | None:intergenic |
| GAGGCAGGGTTTGGTCCACT+TGG | 0.522870 | 8_2:-25524167 | None:intergenic |
| AAATCAATAAGGGCTTCCTT+AGG | 0.523475 | 8_2:-25524704 | None:intergenic |
| GATACAACAATTGGACGTAC+AGG | 0.524448 | 8_2:-25524737 | None:intergenic |
| GAGAACCTCGGTGATCTAAA+CGG | 0.525846 | 8_2:+25524482 | Msa1241780:CDS |
| GTTTATGCGGGAAACTCAAA+AGG | 0.526842 | 8_2:+25524263 | Msa1241780:CDS |
| ATATCAGAGTCGCTGAAAGC+AGG | 0.527495 | 8_2:-25525051 | None:intergenic |
| GTTGGTGGTTCTGCTAGTAA+AGG | 0.529338 | 8_2:+25524623 | Msa1241780:CDS |
| GCACCCTGTTTCAGTGGTGA+TGG | 0.531362 | 8_2:+25524590 | Msa1241780:CDS |
| AACTCCAACACCTTCTCTGA+TGG | 0.531649 | 8_2:-25525519 | None:intergenic |
| TATGGAAACCTGGTTTATGC+GGG | 0.531736 | 8_2:+25524251 | Msa1241780:CDS |
| GTTTCAGTGGTGATGGAGAG+TGG | 0.534496 | 8_2:+25524597 | Msa1241780:CDS |
| TTGAGTTTCCCGCATAAACC+AGG | 0.535434 | 8_2:-25524259 | None:intergenic |
| CATGCCTCAAGTCCAGTTGA+AGG | 0.538226 | 8_2:+25525231 | Msa1241780:CDS |
| TCACGCAACAAGTGTTCTGA+TGG | 0.542864 | 8_2:+25524188 | Msa1241780:CDS |
| GTTGATGAGAGCAATGGTAA+TGG | 0.547411 | 8_2:+25525606 | Msa1241780:CDS |
| AACACTTGTTGCGTGAGGCA+GGG | 0.547477 | 8_2:-25524181 | None:intergenic |
| AAACGGTGTTGAGAAGTTGA+AGG | 0.549513 | 8_2:+25524499 | Msa1241780:CDS |
| GTTTGATTTGATATAGAGCA+AGG | 0.549874 | 8_2:+25525879 | Msa1241780:three_prime_UTR |
| GTTTGGAGTGTGTATAAGGA+GGG | 0.551726 | 8_2:+25523050 | Msa1241780:CDS |
| TGATGGAAGCTGTGTTATCT+GGG | 0.552742 | 8_2:+25523830 | Msa1241780:CDS |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 8_2:+25524646 | Msa1241780:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 8_2:+25524688 | Msa1241780:CDS |
| AATTTATTTACCTAGTGGCA+AGG | 0.557347 | 8_2:-25522116 | None:intergenic |
| TCTAGGTCTCCTGGATACCC+AGG | 0.562625 | 8_2:+25523077 | Msa1241780:CDS |
| ATTACCTTCAACTGGACTTG+AGG | 0.564220 | 8_2:-25525235 | None:intergenic |
| AAGCTCTTTAGCAATGCCCC+TGG | 0.567723 | 8_2:-25523862 | None:intergenic |
| GTGTTTAAGTCAACAATCAT+CGG | 0.569428 | 8_2:-25524104 | None:intergenic |
| AGAAAGTTCTTCAAAGAATG+GGG | 0.569622 | 8_2:+25525146 | Msa1241780:CDS |
| AATGGGGACAGCAATAACTC+TGG | 0.569963 | 8_2:+25525162 | Msa1241780:CDS |
| ATTATTTAAAGATGATGCTG+TGG | 0.572038 | 8_2:+25525470 | Msa1241780:intron |
| TACCACTCATGACATCCCAC+AGG | 0.572721 | 8_2:-25523977 | None:intergenic |
| GTATGGAAACCTGGTTTATG+CGG | 0.575213 | 8_2:+25524250 | Msa1241780:CDS |
| TTTCAGTGGTGATGGAGAGT+GGG | 0.579791 | 8_2:+25524598 | Msa1241780:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 8_2:+25524584 | Msa1241780:CDS |
| ATTTACATATGGGATAGAGC+TGG | 0.580981 | 8_2:+25524656 | Msa1241780:CDS |
| TTACAGGGTAGTTAGACTCT+GGG | 0.581348 | 8_2:-25522999 | None:intergenic |
| GGACACGCCAAGCAGAGAGA+TGG | 0.582568 | 8_2:-25524068 | None:intergenic |
| TCTGCTGTCATTCATCAGAC+AGG | 0.583056 | 8_2:-25525644 | None:intergenic |
| AGCTTCCTCTCCTTGCCACT+AGG | 0.583486 | 8_2:+25522106 | Msa1241780:CDS |
| GCCATGGTTCCTATCTCTGG+TGG | 0.585768 | 8_2:+25524326 | Msa1241780:CDS |
| GGTTTGGAGTGTGTATAAGG+AGG | 0.590449 | 8_2:+25523049 | Msa1241780:CDS |
| TTACTAAAACATGCAGCAGT+AGG | 0.595182 | 8_2:-25524227 | None:intergenic |
| TAGATAACATAGCTCTTCCT+CGG | 0.597086 | 8_2:-25525076 | None:intergenic |
| AACATTGTATTCAGCAGGAA+CGG | 0.597939 | 8_2:+25524362 | Msa1241780:CDS |
| GACCAACAAATACTGGTGAT+GGG | 0.601286 | 8_2:-25523906 | None:intergenic |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 8_2:+25524681 | Msa1241780:CDS |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 8_2:-25524219 | None:intergenic |
| ATCAGAACACTTGTTGCGTG+AGG | 0.606314 | 8_2:-25524186 | None:intergenic |
| GAAACCATCAGAGAAGGTGT+TGG | 0.608768 | 8_2:+25525515 | Msa1241780:CDS |
| TTGATATAGAGCAAGGCCAA+TGG | 0.611168 | 8_2:+25525886 | Msa1241780:three_prime_UTR |
| CTGACAAGTCGCTATCCCTG+TGG | 0.611774 | 8_2:+25523961 | Msa1241780:CDS |
| TTATTTAAAGATGATGCTGT+GGG | 0.613365 | 8_2:+25525471 | Msa1241780:intron |
| ATGTACCTGAACAAGAAGAC+AGG | 0.619283 | 8_2:+25525118 | Msa1241780:CDS |
| AAAGCGGAAACCATCAGAGA+AGG | 0.621405 | 8_2:+25525509 | Msa1241780:CDS |
| AGTATTTGTTGGTCAAAGTG+TGG | 0.624701 | 8_2:+25523915 | Msa1241780:CDS |
| TGTATAAGGAGGGAAAGTCT+AGG | 0.628797 | 8_2:+25523060 | Msa1241780:CDS |
| TGATTGCATCTTGAAACTCA+CGG | 0.633891 | 8_2:-25524550 | None:intergenic |
| TGACAAGTCGCTATCCCTGT+GGG | 0.635890 | 8_2:+25523962 | Msa1241780:CDS |
| TGTTCAGGTACATCGCGACA+GGG | 0.638144 | 8_2:-25525108 | None:intergenic |
| TCTCCATCACCACTGAAACA+GGG | 0.640101 | 8_2:-25524593 | None:intergenic |
| CTAGGTCTCCTGGATACCCA+GGG | 0.642000 | 8_2:+25523078 | Msa1241780:CDS |
| ATCTGATGTCAATGAAGACG+AGG | 0.648566 | 8_2:+25524999 | Msa1241780:CDS |
| TCTGTCTCTGAGAAACCAAG+TGG | 0.649281 | 8_2:+25524152 | Msa1241780:CDS |
| ACCACTCATGACATCCCACA+GGG | 0.650263 | 8_2:-25523976 | None:intergenic |
| TAGTTAGACTCTGGGCAGAG+TGG | 0.652747 | 8_2:-25522991 | None:intergenic |
| AAGCCCTTATTGATTTAGCG+TGG | 0.655079 | 8_2:+25524711 | Msa1241780:CDS |
| ATTTACCTAGTGGCAAGGAG+AGG | 0.656270 | 8_2:-25522111 | None:intergenic |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 8_2:-25524216 | None:intergenic |
| GCAGAAATTGAGACCTTACA+GGG | 0.658339 | 8_2:-25523014 | None:intergenic |
| AATCACGAAGGTGCACTGGA+AGG | 0.658692 | 8_2:+25524568 | Msa1241780:CDS |
| ATCATCGGAGCACATGAGAG+AGG | 0.660157 | 8_2:-25524089 | None:intergenic |
| CAGCGACTCTGATATGTCCG+AGG | 0.661449 | 8_2:+25525059 | Msa1241780:CDS |
| AGATGGTGAGGTGAGTGCCA+TGG | 0.672123 | 8_2:+25524310 | Msa1241780:CDS |
| TCTTTGGTTGATGAGAGCAA+TGG | 0.672367 | 8_2:+25525600 | Msa1241780:CDS |
| ACCACCAGAGATAGGAACCA+TGG | 0.676109 | 8_2:-25524327 | None:intergenic |
| GGATAGCGACTTGTCAGCAG+CGG | 0.680280 | 8_2:-25523955 | None:intergenic |
| TCCCTGTGGGATGTCATGAG+TGG | 0.691387 | 8_2:+25523975 | Msa1241780:CDS |
| GAACACGAATTAAAAGAAAG+CGG | 0.698073 | 8_2:+25525493 | Msa1241780:CDS |
| AATTGACGGTAAAGATGGTG+AGG | 0.706698 | 8_2:+25524298 | Msa1241780:CDS |
| GCCGAACTTAAAGAGAACCT+CGG | 0.709268 | 8_2:+25524470 | Msa1241780:CDS |
| ATGAAGACGAGCTAGTAAAG+GGG | 0.710400 | 8_2:-25524030 | None:intergenic |
| GTTTCAAGATGCAATCACGA+AGG | 0.735993 | 8_2:+25524556 | Msa1241780:CDS |
| CAACACCGTTTAGATCACCG+AGG | 0.770889 | 8_2:-25524487 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATTAGAAGAA+AGG | - | chr8_2:25523477-25523496 | None:intergenic | 10.0% |
| !! | AAATCAATCATATTTATATA+TGG | - | chr8_2:25525778-25525797 | None:intergenic | 10.0% |
| !! | ATATATAAATATGATTGATT+TGG | + | chr8_2:25525777-25525796 | Msa1241780:three_prime_UTR | 10.0% |
| !!! | NNNNNTCTAGCATTTTAATT+TGG | + | chr8_2:25522298-25522317 | Msa1241780:intron | 15.0% |
| !!! | NNNNTCTAGCATTTTAATTT+GGG | + | chr8_2:25522299-25522318 | Msa1241780:intron | 15.0% |
| !! | TATAAAGTAAATAAGCTTAA+GGG | - | chr8_2:25522658-25522677 | None:intergenic | 15.0% |
| !! | TTATAAAGTAAATAAGCTTA+AGG | - | chr8_2:25522659-25522678 | None:intergenic | 15.0% |
| !! | TAAGCTTATTTACTTTATAA+TGG | + | chr8_2:25522659-25522678 | Msa1241780:intron | 15.0% |
| !!! | TTTTATGAATTATTTACTCA+AGG | + | chr8_2:25523741-25523760 | Msa1241780:intron | 15.0% |
| !!! | TTCTTTCATTTTCTATTTTA+TGG | + | chr8_2:25524942-25524961 | Msa1241780:intron | 15.0% |
| !! | GTATTTAATCTGTATATGTA+AGG | + | chr8_2:25522852-25522871 | Msa1241780:intron | 20.0% |
| !! | TATGGAAAGTAAAAAGATAT+TGG | + | chr8_2:25523273-25523292 | Msa1241780:intron | 20.0% |
| !!! | ATTTTACAGTAATTCAACTT+TGG | + | chr8_2:25523334-25523353 | Msa1241780:intron | 20.0% |
| !!! | GGTATTTTCAAAAAATCATT+AGG | + | chr8_2:25523355-25523374 | Msa1241780:intron | 20.0% |
| !! | TAAATCTATTCCATCATTAA+TGG | - | chr8_2:25523427-25523446 | None:intergenic | 20.0% |
| !! | TATGCTTAAATTTGAATTTG+TGG | + | chr8_2:25523689-25523708 | Msa1241780:intron | 20.0% |
| !! | TTAAATTTGAATTTGTGGAT+TGG | + | chr8_2:25523694-25523713 | Msa1241780:intron | 20.0% |
| !! | AATGAAAATAATCTGTTACA+AGG | - | chr8_2:25525280-25525299 | None:intergenic | 20.0% |
| !! | TCATCTTTAAATAATGTTGA+AGG | - | chr8_2:25525465-25525484 | None:intergenic | 20.0% |
| ! | TAGCTAATTTATTTACCTAG+TGG | - | chr8_2:25522124-25522143 | None:intergenic | 25.0% |
| ! | AATAAATTGAGGGCAAATTT+GGG | - | chr8_2:25522591-25522610 | None:intergenic | 25.0% |
| ! | TAAATAAGCTTAAGGGTAAA+AGG | - | chr8_2:25522651-25522670 | None:intergenic | 25.0% |
| ! | AAAATATTCTAAGCTCTATG+TGG | - | chr8_2:25522830-25522849 | None:intergenic | 25.0% |
| !! | ACATAGAGCTTAGAATATTT+TGG | + | chr8_2:25522829-25522848 | Msa1241780:intron | 25.0% |
| !! | CATAGAGCTTAGAATATTTT+GGG | + | chr8_2:25522830-25522849 | Msa1241780:intron | 25.0% |
| !! | TATATCTTTATCCTGTTTTC+TGG | + | chr8_2:25523186-25523205 | Msa1241780:intron | 25.0% |
| ! | TCATTGCATTACAATAGAAT+TGG | - | chr8_2:25523213-25523232 | None:intergenic | 25.0% |
| !! | TTGCTATTGATATGATAGTA+TGG | + | chr8_2:25523255-25523274 | Msa1241780:intron | 25.0% |
| !! | AAAGATATTGGTTATGACAA+TGG | + | chr8_2:25523285-25523304 | Msa1241780:intron | 25.0% |
| ! | AGTTGAATTACTGTAAAATG+AGG | - | chr8_2:25523333-25523352 | None:intergenic | 25.0% |
| ! | ATTTGATAAATTGAATCAGC+TGG | + | chr8_2:25523801-25523820 | Msa1241780:intron | 25.0% |
| ! | AAAGAAACAGATACAACAAT+TGG | - | chr8_2:25524749-25524768 | None:intergenic | 25.0% |
| ! | TTAGAAAGTTCTTCAAAGAA+TGG | + | chr8_2:25525144-25525163 | Msa1241780:CDS | 25.0% |
| ! | TAGAAAGTTCTTCAAAGAAT+GGG | + | chr8_2:25525145-25525164 | Msa1241780:CDS | 25.0% |
| !!! | TGTTACAAGGATATTTTGAA+TGG | - | chr8_2:25525267-25525286 | None:intergenic | 25.0% |
| ! | AACGGTTCAATTGAAAAATT+CGG | - | chr8_2:25525312-25525331 | None:intergenic | 25.0% |
| ! | ATTATTTAAAGATGATGCTG+TGG | + | chr8_2:25525470-25525489 | Msa1241780:intron | 25.0% |
| ! | TTATTTAAAGATGATGCTGT+GGG | + | chr8_2:25525471-25525490 | Msa1241780:intron | 25.0% |
| ! | AAGAACCAAAACTAAATCTT+TGG | + | chr8_2:25525584-25525603 | Msa1241780:CDS | 25.0% |
| !!! | ATCAACCAAAGATTTAGTTT+TGG | - | chr8_2:25525592-25525611 | None:intergenic | 25.0% |
| !! | TTGCTTAGCAAATTTTCATT+AGG | + | chr8_2:25525742-25525761 | Msa1241780:three_prime_UTR | 25.0% |
| !! | TTAGCAAATTTTCATTAGGT+GGG | + | chr8_2:25525746-25525765 | Msa1241780:three_prime_UTR | 25.0% |
| AATTTATTTACCTAGTGGCA+AGG | - | chr8_2:25522119-25522138 | None:intergenic | 30.0% | |
| ! | CTGTTATTTACTACAGAGAT+AGG | - | chr8_2:25522481-25522500 | None:intergenic | 30.0% |
| TATTCTCCTTCTTTGCTAAT+TGG | - | chr8_2:25522542-25522561 | None:intergenic | 30.0% | |
| CAATAAATTGAGGGCAAATT+TGG | - | chr8_2:25522592-25522611 | None:intergenic | 30.0% | |
| CAAATTTGCCCTCAATTTAT+TGG | + | chr8_2:25522590-25522609 | Msa1241780:intron | 30.0% | |
| GTGAATGACCAATAAATTGA+GGG | - | chr8_2:25522601-25522620 | None:intergenic | 30.0% | |
| !! | TTCAATGTACTTTGAAGTAG+TGG | + | chr8_2:25522734-25522753 | Msa1241780:intron | 30.0% |
| ! | ACTATACAGCTATAGCATTT+TGG | + | chr8_2:25522771-25522790 | Msa1241780:intron | 30.0% |
| TCCCTAATTAGGAAAAATGT+TGG | + | chr8_2:25522885-25522904 | Msa1241780:intron | 30.0% | |
| ! | CCCAACATTTTTCCTAATTA+GGG | - | chr8_2:25522889-25522908 | None:intergenic | 30.0% |
| CCCTAATTAGGAAAAATGTT+GGG | + | chr8_2:25522886-25522905 | Msa1241780:intron | 30.0% | |
| ! | TCCCAACATTTTTCCTAATT+AGG | - | chr8_2:25522890-25522909 | None:intergenic | 30.0% |
| TAAAGCCAATAATCTGCAAT+TGG | - | chr8_2:25522921-25522940 | None:intergenic | 30.0% | |
| AGCATATAGTATGCCTAATT+CGG | - | chr8_2:25522951-25522970 | None:intergenic | 30.0% | |
| TCTGTATCACATTGATACTA+GGG | + | chr8_2:25523135-25523154 | Msa1241780:intron | 30.0% | |
| TTCTGTGATACCATTAATGA+TGG | + | chr8_2:25523414-25523433 | Msa1241780:intron | 30.0% | |
| AAACTCATTGCAAAAGGTTT+AGG | - | chr8_2:25523512-25523531 | None:intergenic | 30.0% | |
| ! | TAAACCTTTTGCAATGAGTT+TGG | + | chr8_2:25523511-25523530 | Msa1241780:intron | 30.0% |
| GTGTTTAAGTCAACAATCAT+CGG | - | chr8_2:25524107-25524126 | None:intergenic | 30.0% | |
| ! | TTTTAGTAAGTATGGAAACC+TGG | + | chr8_2:25524241-25524260 | Msa1241780:CDS | 30.0% |
| GGTGAAATTCTTGTAATTGA+CGG | + | chr8_2:25524284-25524303 | Msa1241780:CDS | 30.0% | |
| TAAAGAACATTGTATTCAGC+AGG | + | chr8_2:25524357-25524376 | Msa1241780:CDS | 30.0% | |
| ACTCAAATGATAGAGTAATC+AGG | + | chr8_2:25524402-25524421 | Msa1241780:CDS | 30.0% | |
| AGAGCACAAGATTTACATAT+GGG | + | chr8_2:25524646-25524665 | Msa1241780:CDS | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | + | chr8_2:25524681-25524700 | Msa1241780:CDS | 30.0% | |
| TGAGTGGAATAGTTTATATC+TGG | + | chr8_2:25524768-25524787 | Msa1241780:CDS | 30.0% | |
| GAGTGGAATAGTTTATATCT+GGG | + | chr8_2:25524769-25524788 | Msa1241780:CDS | 30.0% | |
| TAAGGTATGTGAACGTTATA+TGG | + | chr8_2:25524904-25524923 | Msa1241780:intron | 30.0% | |
| AGAAAGTTCTTCAAAGAATG+GGG | + | chr8_2:25525146-25525165 | Msa1241780:CDS | 30.0% | |
| CAAGAAACCTAAACTCATAA+AGG | - | chr8_2:25525351-25525370 | None:intergenic | 30.0% | |
| ! | TCAAATTCTGAGAACAACAT+GGG | - | chr8_2:25525374-25525393 | None:intergenic | 30.0% |
| ! | TTCAAATTCTGAGAACAACA+TGG | - | chr8_2:25525375-25525394 | None:intergenic | 30.0% |
| GAACACGAATTAAAAGAAAG+CGG | + | chr8_2:25525493-25525512 | Msa1241780:CDS | 30.0% | |
| ! | CTTAGCAAATTTTCATTAGG+TGG | + | chr8_2:25525745-25525764 | Msa1241780:three_prime_UTR | 30.0% |
| !! | GTTTGATTTGATATAGAGCA+AGG | + | chr8_2:25525879-25525898 | Msa1241780:three_prime_UTR | 30.0% |
| TCTCCACACAAAAATTTACC+AGG | - | chr8_2:25522376-25522395 | None:intergenic | 35.0% | |
| !! | TAAGCTGATTTTGTACGCAA+TGG | + | chr8_2:25522398-25522417 | Msa1241780:intron | 35.0% |
| ATTTACTACAGAGATAGGCT+TGG | - | chr8_2:25522476-25522495 | None:intergenic | 35.0% | |
| GTAAATAACAGCTGCTATAG+TGG | + | chr8_2:25522490-25522509 | Msa1241780:intron | 35.0% | |
| CGTGAATGACCAATAAATTG+AGG | - | chr8_2:25522602-25522621 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTTGTTGAACTTCT+TGG | + | chr8_2:25522621-25522640 | Msa1241780:intron | 35.0% |
| ! | GTTTTTGTTGAACTTCTTGG+TGG | + | chr8_2:25522624-25522643 | Msa1241780:intron | 35.0% |
| TATAGCTGTATAGTGTGTAG+CGG | - | chr8_2:25522765-25522784 | None:intergenic | 35.0% | |
| ! | ATACAGCTATAGCATTTTGG+TGG | + | chr8_2:25522774-25522793 | Msa1241780:intron | 35.0% |
| !! | CTATAGCATTTTGGTGGTTT+TGG | + | chr8_2:25522780-25522799 | Msa1241780:intron | 35.0% |
| TCTGTATATGTAAGGTCGAT+TGG | + | chr8_2:25522860-25522879 | Msa1241780:intron | 35.0% | |
| GATTGCCAATTGCAGATTAT+TGG | + | chr8_2:25522913-25522932 | Msa1241780:intron | 35.0% | |
| GCTTTAATTGATGCCGAATT+AGG | + | chr8_2:25522935-25522954 | Msa1241780:intron | 35.0% | |
| AATTTCTGCAGTTTCTGTCA+AGG | + | chr8_2:25523028-25523047 | Msa1241780:CDS | 35.0% | |
| AGTATCAATGTGATACAGAG+CGG | - | chr8_2:25523134-25523153 | None:intergenic | 35.0% | |
| CTCTGTATCACATTGATACT+AGG | + | chr8_2:25523134-25523153 | Msa1241780:intron | 35.0% | |
| ATAGAATTGGACCAGAAAAC+AGG | - | chr8_2:25523200-25523219 | None:intergenic | 35.0% | |
| TTGACCAAACTCATTGCAAA+AGG | - | chr8_2:25523518-25523537 | None:intergenic | 35.0% | |
| !! | AATTCAGTGCTTTCAAGTTG+TGG | + | chr8_2:25523577-25523596 | Msa1241780:intron | 35.0% |
| !! | ATTCAGTGCTTTCAAGTTGT+GGG | + | chr8_2:25523578-25523597 | Msa1241780:intron | 35.0% |
| AAGTTGTGGGATTAGATTTC+AGG | + | chr8_2:25523591-25523610 | Msa1241780:intron | 35.0% | |
| AGTAACATGAGTGAGAAAGT+TGG | - | chr8_2:25523779-25523798 | None:intergenic | 35.0% | |
| !!! | TTATCTGGGATTTTGAAACC+AGG | + | chr8_2:25523844-25523863 | Msa1241780:CDS | 35.0% |
| !!! | TATCTGGGATTTTGAAACCA+GGG | + | chr8_2:25523845-25523864 | Msa1241780:CDS | 35.0% |
| ACACTTTGACCAACAAATAC+TGG | - | chr8_2:25523916-25523935 | None:intergenic | 35.0% | |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | + | chr8_2:25523915-25523934 | Msa1241780:CDS | 35.0% |
| TTACTAAAACATGCAGCAGT+AGG | - | chr8_2:25524230-25524249 | None:intergenic | 35.0% | |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | + | chr8_2:25524233-25524252 | Msa1241780:CDS | 35.0% |
| CTTGTAATTGACGGTAAAGA+TGG | + | chr8_2:25524293-25524312 | Msa1241780:CDS | 35.0% | |
| AACATTGTATTCAGCAGGAA+CGG | + | chr8_2:25524362-25524381 | Msa1241780:CDS | 35.0% | |
| ! | AGTGCTCTAACTTCATCTTT+TGG | - | chr8_2:25524449-25524468 | None:intergenic | 35.0% |
| TGATTGCATCTTGAAACTCA+CGG | - | chr8_2:25524553-25524572 | None:intergenic | 35.0% | |
| ! | GAGAGCACAAGATTTACATA+TGG | + | chr8_2:25524645-25524664 | Msa1241780:CDS | 35.0% |
| ATTTACATATGGGATAGAGC+TGG | + | chr8_2:25524656-25524675 | Msa1241780:CDS | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | + | chr8_2:25524680-25524699 | Msa1241780:CDS | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | - | chr8_2:25524707-25524726 | None:intergenic | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | - | chr8_2:25524717-25524736 | None:intergenic | 35.0% | |
| ! | GTTGTATCTGTTTCTTTGAG+TGG | + | chr8_2:25524752-25524771 | Msa1241780:CDS | 35.0% |
| CCAGTTCTCAATGTAATCTT+TGG | - | chr8_2:25524795-25524814 | None:intergenic | 35.0% | |
| CCAAAGATTACATTGAGAAC+TGG | + | chr8_2:25524792-25524811 | Msa1241780:CDS | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | + | chr8_2:25524826-25524845 | Msa1241780:CDS | 35.0% | |
| !! | TCCTCAATCTCTTTGAAATC+AGG | - | chr8_2:25524830-25524849 | None:intergenic | 35.0% |
| CAAAGAGATTGAGGAAAATG+AGG | + | chr8_2:25524835-25524854 | Msa1241780:CDS | 35.0% | |
| TTTGAATCCTGACACTGATA+AGG | + | chr8_2:25524886-25524905 | Msa1241780:CDS | 35.0% | |
| TTCATATCCTTGCAGGTAAA+AGG | + | chr8_2:25524976-25524995 | Msa1241780:intron | 35.0% | |
| ! | TGACATTTTTACAGTCGAGA+AGG | + | chr8_2:25525026-25525045 | Msa1241780:CDS | 35.0% |
| TAGATAACATAGCTCTTCCT+CGG | - | chr8_2:25525079-25525098 | None:intergenic | 35.0% | |
| AAAAACCTGTCTTCTTGTTC+AGG | - | chr8_2:25525126-25525145 | None:intergenic | 35.0% | |
| ! | TAACTCTGGATCACCATTTT+CGG | + | chr8_2:25525176-25525195 | Msa1241780:CDS | 35.0% |
| GTCGATAAAACCTCAAAATC+TGG | + | chr8_2:25525555-25525574 | Msa1241780:CDS | 35.0% | |
| !!! | TCTTGATTTGCCAGATTTTG+AGG | - | chr8_2:25525568-25525587 | None:intergenic | 35.0% |
| GAATGACAGCAGATTGTAAA+TGG | + | chr8_2:25525654-25525673 | Msa1241780:exon | 35.0% | |
| ATTTACCAGGCTGCTCTATT+TGG | - | chr8_2:25522363-25522382 | None:intergenic | 40.0% | |
| ! | CAGCCTGGTAAATTTTTGTG+TGG | + | chr8_2:25522370-25522389 | Msa1241780:intron | 40.0% |
| TGCTTAGTCACATGATCTTG+AGG | + | chr8_2:25522422-25522441 | Msa1241780:intron | 40.0% | |
| TCTATGTGGTCAATGAAGGA+TGG | - | chr8_2:25522816-25522835 | None:intergenic | 40.0% | |
| AAGCTCTATGTGGTCAATGA+AGG | - | chr8_2:25522820-25522839 | None:intergenic | 40.0% | |
| !! | GTCGATTGGTTTCCCTAATT+AGG | + | chr8_2:25522874-25522893 | Msa1241780:intron | 40.0% |
| !!! | CAGAGTGGATTAGGGATTTT+TGG | - | chr8_2:25522979-25522998 | None:intergenic | 40.0% |
| TTACAGGGTAGTTAGACTCT+GGG | - | chr8_2:25523002-25523021 | None:intergenic | 40.0% | |
| GCAGAAATTGAGACCTTACA+GGG | - | chr8_2:25523017-25523036 | None:intergenic | 40.0% | |
| TGCAGAAATTGAGACCTTAC+AGG | - | chr8_2:25523018-25523037 | None:intergenic | 40.0% | |
| ! | CAAGGTTTGGAGTGTGTATA+AGG | + | chr8_2:25523046-25523065 | Msa1241780:CDS | 40.0% |
| ! | GTTTGGAGTGTGTATAAGGA+GGG | + | chr8_2:25523050-25523069 | Msa1241780:CDS | 40.0% |
| TGTATAAGGAGGGAAAGTCT+AGG | + | chr8_2:25523060-25523079 | Msa1241780:CDS | 40.0% | |
| AACTATCTATCCCATACCCT+GGG | - | chr8_2:25523097-25523116 | None:intergenic | 40.0% | |
| AAACTATCTATCCCATACCC+TGG | - | chr8_2:25523098-25523117 | None:intergenic | 40.0% | |
| TTGTGGGATTAGATTTCAGG+AGG | + | chr8_2:25523594-25523613 | Msa1241780:intron | 40.0% | |
| GTACTGAGTGCATATCTTTC+TGG | + | chr8_2:25523629-25523648 | Msa1241780:intron | 40.0% | |
| ! | ATGATGGAAGCTGTGTTATC+TGG | + | chr8_2:25523829-25523848 | Msa1241780:CDS | 40.0% |
| TGATGGAAGCTGTGTTATCT+GGG | + | chr8_2:25523830-25523849 | Msa1241780:CDS | 40.0% | |
| !!! | ATCTGGGATTTTGAAACCAG+GGG | + | chr8_2:25523846-25523865 | Msa1241780:CDS | 40.0% |
| GACCAACAAATACTGGTGAT+GGG | - | chr8_2:25523909-25523928 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | - | chr8_2:25523910-25523929 | None:intergenic | 40.0% | |
| ATGAAGACGAGCTAGTAAAG+GGG | - | chr8_2:25524033-25524052 | None:intergenic | 40.0% | |
| GATGAAGACGAGCTAGTAAA+GGG | - | chr8_2:25524034-25524053 | None:intergenic | 40.0% | |
| GTATGGAAACCTGGTTTATG+CGG | + | chr8_2:25524250-25524269 | Msa1241780:CDS | 40.0% | |
| TATGGAAACCTGGTTTATGC+GGG | + | chr8_2:25524251-25524270 | Msa1241780:CDS | 40.0% | |
| GTTTATGCGGGAAACTCAAA+AGG | + | chr8_2:25524263-25524282 | Msa1241780:CDS | 40.0% | |
| AATTGACGGTAAAGATGGTG+AGG | + | chr8_2:25524298-25524317 | Msa1241780:CDS | 40.0% | |
| ! | GCTCTAACTTCATCTTTTGG+CGG | - | chr8_2:25524446-25524465 | None:intergenic | 40.0% |
| ! | ACCGAGGTTCTCTTTAAGTT+CGG | - | chr8_2:25524474-25524493 | None:intergenic | 40.0% |
| ! | AAACGGTGTTGAGAAGTTGA+AGG | + | chr8_2:25524499-25524518 | Msa1241780:CDS | 40.0% |
| GTTTCAAGATGCAATCACGA+AGG | + | chr8_2:25524556-25524575 | Msa1241780:CDS | 40.0% | |
| !! | AAGCCCTTATTGATTTAGCG+TGG | + | chr8_2:25524711-25524730 | Msa1241780:CDS | 40.0% |
| GATGCCACGCTAAATCAATA+AGG | - | chr8_2:25524718-25524737 | None:intergenic | 40.0% | |
| GATACAACAATTGGACGTAC+AGG | - | chr8_2:25524740-25524759 | None:intergenic | 40.0% | |
| ! | TGAGGAAAATGAGGAGTATG+TGG | + | chr8_2:25524844-25524863 | Msa1241780:CDS | 40.0% |
| TCACATACCTTATCAGTGTC+AGG | - | chr8_2:25524896-25524915 | None:intergenic | 40.0% | |
| AACCAAGTTCATATCCTTGC+AGG | + | chr8_2:25524969-25524988 | Msa1241780:intron | 40.0% | |
| TACCTGCAAGGATATGAACT+TGG | - | chr8_2:25524974-25524993 | None:intergenic | 40.0% | |
| ! | ATCAGATCCTTTTACCTGCA+AGG | - | chr8_2:25524986-25525005 | None:intergenic | 40.0% |
| ATCTGATGTCAATGAAGACG+AGG | + | chr8_2:25524999-25525018 | Msa1241780:CDS | 40.0% | |
| ATGTACCTGAACAAGAAGAC+AGG | + | chr8_2:25525118-25525137 | Msa1241780:CDS | 40.0% | |
| ! | ATCACCATTTTCGGAAGAAG+TGG | + | chr8_2:25525185-25525204 | Msa1241780:CDS | 40.0% |
| ATTACCTTCAACTGGACTTG+AGG | - | chr8_2:25525238-25525257 | None:intergenic | 40.0% | |
| GGCATAACATTACCTTCAAC+TGG | - | chr8_2:25525246-25525265 | None:intergenic | 40.0% | |
| TGTGAGGCCTTTATGAGTTT+AGG | + | chr8_2:25525341-25525360 | Msa1241780:intron | 40.0% | |
| !! | TCTTTGGTTGATGAGAGCAA+TGG | + | chr8_2:25525600-25525619 | Msa1241780:CDS | 40.0% |
| ! | GTTGATGAGAGCAATGGTAA+TGG | + | chr8_2:25525606-25525625 | Msa1241780:CDS | 40.0% |
| TTGATATAGAGCAAGGCCAA+TGG | + | chr8_2:25525886-25525905 | Msa1241780:three_prime_UTR | 40.0% | |
| ATTTACCTAGTGGCAAGGAG+AGG | - | chr8_2:25522114-25522133 | None:intergenic | 45.0% | |
| CTGTATAGTGTGTAGCGGTA+TGG | - | chr8_2:25522760-25522779 | None:intergenic | 45.0% | |
| ATGTGGTCAATGAAGGATGG+CGG | - | chr8_2:25522813-25522832 | None:intergenic | 45.0% | |
| CTTACAGGGTAGTTAGACTC+TGG | - | chr8_2:25523003-25523022 | None:intergenic | 45.0% | |
| CAGAGTCTAACTACCCTGTA+AGG | + | chr8_2:25523001-25523020 | Msa1241780:CDS | 45.0% | |
| CTGCAGTTTCTGTCAAGGTT+TGG | + | chr8_2:25523033-25523052 | Msa1241780:CDS | 45.0% | |
| ! | GGTTTGGAGTGTGTATAAGG+AGG | + | chr8_2:25523049-25523068 | Msa1241780:CDS | 45.0% |
| TGGTCAACACGTATGTGTGT+TGG | + | chr8_2:25523531-25523550 | Msa1241780:intron | 45.0% | |
| CTCCCATCACCAGTATTTGT+TGG | + | chr8_2:25523904-25523923 | Msa1241780:CDS | 45.0% | |
| GGGATGTCATGAGTGGTAAA+AGG | + | chr8_2:25523982-25524001 | Msa1241780:CDS | 45.0% | |
| GGATGAAGACGAGCTAGTAA+AGG | - | chr8_2:25524035-25524054 | None:intergenic | 45.0% | |
| TTACTAGCTCGTCTTCATCC+TGG | + | chr8_2:25524035-25524054 | Msa1241780:CDS | 45.0% | |
| TACTAGCTCGTCTTCATCCT+GGG | + | chr8_2:25524036-25524055 | Msa1241780:CDS | 45.0% | |
| !! | CAAGCAGAGAGATGGTTTTG+AGG | - | chr8_2:25524063-25524082 | None:intergenic | 45.0% |
| CTCAAAACCATCTCTCTGCT+TGG | + | chr8_2:25524061-25524080 | Msa1241780:CDS | 45.0% | |
| ! | TCTGTCTCTGAGAAACCAAG+TGG | + | chr8_2:25524152-25524171 | Msa1241780:CDS | 45.0% |
| ! | ATCAGAACACTTGTTGCGTG+AGG | - | chr8_2:25524189-25524208 | None:intergenic | 45.0% |
| TCACGCAACAAGTGTTCTGA+TGG | + | chr8_2:25524188-25524207 | Msa1241780:CDS | 45.0% | |
| TTGAGTTTCCCGCATAAACC+AGG | - | chr8_2:25524262-25524281 | None:intergenic | 45.0% | |
| ACTACTGAACCACCAGAGAT+AGG | - | chr8_2:25524338-25524357 | None:intergenic | 45.0% | |
| GCCGAACTTAAAGAGAACCT+CGG | + | chr8_2:25524470-25524489 | Msa1241780:CDS | 45.0% | |
| GAGAACCTCGGTGATCTAAA+CGG | + | chr8_2:25524482-25524501 | Msa1241780:CDS | 45.0% | |
| TCTCCATCACCACTGAAACA+GGG | - | chr8_2:25524596-25524615 | None:intergenic | 45.0% | |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | + | chr8_2:25524598-25524617 | Msa1241780:CDS | 45.0% |
| !! | GTTGGTGGTTCTGCTAGTAA+AGG | + | chr8_2:25524623-25524642 | Msa1241780:CDS | 45.0% |
| GAAAATCCTTGAAGGGCCTA+AGG | + | chr8_2:25524688-25524707 | Msa1241780:CDS | 45.0% | |
| ATATCAGAGTCGCTGAAAGC+AGG | - | chr8_2:25525054-25525073 | None:intergenic | 45.0% | |
| AATGGGGACAGCAATAACTC+TGG | + | chr8_2:25525162-25525181 | Msa1241780:CDS | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | - | chr8_2:25525192-25525211 | None:intergenic | 45.0% | |
| AACCGTTGAACCACTTTGTG+AGG | + | chr8_2:25525325-25525344 | Msa1241780:intron | 45.0% | |
| CTCATAAAGGCCTCACAAAG+TGG | - | chr8_2:25525338-25525357 | None:intergenic | 45.0% | |
| AAAGCGGAAACCATCAGAGA+AGG | + | chr8_2:25525509-25525528 | Msa1241780:CDS | 45.0% | |
| ! | GAAACCATCAGAGAAGGTGT+TGG | + | chr8_2:25525515-25525534 | Msa1241780:CDS | 45.0% |
| AACTCCAACACCTTCTCTGA+TGG | - | chr8_2:25525522-25525541 | None:intergenic | 45.0% | |
| TCTGCTGTCATTCATCAGAC+AGG | - | chr8_2:25525647-25525666 | None:intergenic | 45.0% | |
| TTCTGCCAAATAGAGCAGCC+TGG | + | chr8_2:25522355-25522374 | Msa1241780:intron | 50.0% | |
| ! | TGCACAGCGTTTTTGTGCAG+CGG | + | chr8_2:25522516-25522535 | Msa1241780:intron | 50.0% |
| CAGCGGCCAATTAGCAAAGA+AGG | + | chr8_2:25522533-25522552 | Msa1241780:intron | 50.0% | |
| !! | ACTCTGGGCAGAGTGGATTA+GGG | - | chr8_2:25522987-25523006 | None:intergenic | 50.0% |
| TAGTTAGACTCTGGGCAGAG+TGG | - | chr8_2:25522994-25523013 | None:intergenic | 50.0% | |
| GAATCAGCTGGCTGCAATGA+TGG | + | chr8_2:25523813-25523832 | Msa1241780:intron | 50.0% | |
| AAGCTCTTTAGCAATGCCCC+TGG | - | chr8_2:25523865-25523884 | None:intergenic | 50.0% | |
| TGACAAGTCGCTATCCCTGT+GGG | + | chr8_2:25523962-25523981 | Msa1241780:CDS | 50.0% | |
| ACCACTCATGACATCCCACA+GGG | - | chr8_2:25523979-25523998 | None:intergenic | 50.0% | |
| TACCACTCATGACATCCCAC+AGG | - | chr8_2:25523980-25523999 | None:intergenic | 50.0% | |
| !!! | AGAGATGGTTTTGAGGACCC+AGG | - | chr8_2:25524056-25524075 | None:intergenic | 50.0% |
| ATCATCGGAGCACATGAGAG+AGG | - | chr8_2:25524092-25524111 | None:intergenic | 50.0% | |
| ! | AACACTTGTTGCGTGAGGCA+GGG | - | chr8_2:25524184-25524203 | None:intergenic | 50.0% |
| ACATGCAGCAGTAGGTGTGA+AGG | - | chr8_2:25524222-25524241 | None:intergenic | 50.0% | |
| AGTGCCATGGTTCCTATCTC+TGG | + | chr8_2:25524323-25524342 | Msa1241780:CDS | 50.0% | |
| ACCACCAGAGATAGGAACCA+TGG | - | chr8_2:25524330-25524349 | None:intergenic | 50.0% | |
| CAACACCGTTTAGATCACCG+AGG | - | chr8_2:25524490-25524509 | None:intergenic | 50.0% | |
| GTTGAGAAGTTGAAGGCTGC+AGG | + | chr8_2:25524506-25524525 | Msa1241780:CDS | 50.0% | |
| ! | ATGCAATCACGAAGGTGCAC+TGG | + | chr8_2:25524564-25524583 | Msa1241780:CDS | 50.0% |
| ! | AATCACGAAGGTGCACTGGA+AGG | + | chr8_2:25524568-25524587 | Msa1241780:CDS | 50.0% |
| CTCTCCATCACCACTGAAAC+AGG | - | chr8_2:25524597-25524616 | None:intergenic | 50.0% | |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | + | chr8_2:25524597-25524616 | Msa1241780:CDS | 50.0% |
| TGTTCAGGTACATCGCGACA+GGG | - | chr8_2:25525111-25525130 | None:intergenic | 50.0% | |
| TTGTTCAGGTACATCGCGAC+AGG | - | chr8_2:25525112-25525131 | None:intergenic | 50.0% | |
| TCGGAAGAAGTGGTAGCAAC+TGG | + | chr8_2:25525195-25525214 | Msa1241780:CDS | 50.0% | |
| CATGCCTCAAGTCCAGTTGA+AGG | + | chr8_2:25525231-25525250 | Msa1241780:CDS | 50.0% | |
| GGCCTCACAAAGTGGTTCAA+CGG | - | chr8_2:25525330-25525349 | None:intergenic | 50.0% | |
| !! | AGAGAAGGTGTTGGAGTTGC+AGG | + | chr8_2:25525524-25525543 | Msa1241780:CDS | 50.0% |
| AGCTTCCTCTCCTTGCCACT+AGG | + | chr8_2:25522106-25522125 | Msa1241780:CDS | 55.0% | |
| ! | GACTCTGGGCAGAGTGGATT+AGG | - | chr8_2:25522988-25523007 | None:intergenic | 55.0% |
| GAGGGAAAGTCTAGGTCTCC+TGG | + | chr8_2:25523068-25523087 | Msa1241780:CDS | 55.0% | |
| TCTAGGTCTCCTGGATACCC+AGG | + | chr8_2:25523077-25523096 | Msa1241780:CDS | 55.0% | |
| CTAGGTCTCCTGGATACCCA+GGG | + | chr8_2:25523078-25523097 | Msa1241780:CDS | 55.0% | |
| TCTCCTGGATACCCAGGGTA+TGG | + | chr8_2:25523083-25523102 | Msa1241780:intron | 55.0% | |
| CTCCTGGATACCCAGGGTAT+GGG | + | chr8_2:25523084-25523103 | Msa1241780:intron | 55.0% | |
| ATCCCATACCCTGGGTATCC+AGG | - | chr8_2:25523089-25523108 | None:intergenic | 55.0% | |
| GGATAGCGACTTGTCAGCAG+CGG | - | chr8_2:25523958-25523977 | None:intergenic | 55.0% | |
| CTGACAAGTCGCTATCCCTG+TGG | + | chr8_2:25523961-25523980 | Msa1241780:CDS | 55.0% | |
| TCCCTGTGGGATGTCATGAG+TGG | + | chr8_2:25523975-25523994 | Msa1241780:CDS | 55.0% | |
| TTGTTGCGTGAGGCAGGGTT+TGG | - | chr8_2:25524179-25524198 | None:intergenic | 55.0% | |
| ! | GAACACTTGTTGCGTGAGGC+AGG | - | chr8_2:25524185-25524204 | None:intergenic | 55.0% |
| TGCAGCAGTAGGTGTGAAGG+AGG | - | chr8_2:25524219-25524238 | None:intergenic | 55.0% | |
| AGATGGTGAGGTGAGTGCCA+TGG | + | chr8_2:25524310-25524329 | Msa1241780:CDS | 55.0% | |
| GCCATGGTTCCTATCTCTGG+TGG | + | chr8_2:25524326-25524345 | Msa1241780:CDS | 55.0% | |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | + | chr8_2:25524584-25524603 | Msa1241780:CDS | 55.0% |
| GCACCCTGTTTCAGTGGTGA+TGG | + | chr8_2:25524590-25524609 | Msa1241780:CDS | 55.0% | |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | + | chr8_2:25524605-25524624 | Msa1241780:CDS | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | + | chr8_2:25524608-25524627 | Msa1241780:CDS | 55.0% |
| CAGCGACTCTGATATGTCCG+AGG | + | chr8_2:25525059-25525078 | Msa1241780:CDS | 55.0% | |
| GGACACGCCAAGCAGAGAGA+TGG | - | chr8_2:25524071-25524090 | None:intergenic | 60.0% | |
| ! | GAGGCAGGGTTTGGTCCACT+TGG | - | chr8_2:25524170-25524189 | None:intergenic | 60.0% |
| GGGCTTCCTTAGGCCCTTCA+AGG | - | chr8_2:25524697-25524716 | None:intergenic | 60.0% | |
| ACATCGCGACAGGGAGATGC+TGG | - | chr8_2:25525102-25525121 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 25522087 | 25525923 | 25522087 | ID=Msa1241780;Name=Msa1241780 |
| chr8_2 | mRNA | 25522087 | 25525923 | 25522087 | ID=Msa1241780-mRNA-1;Parent=Msa1241780;Name=Msa1241780-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.5|0.4|0.6|1|1|5|264|570 |
| chr8_2 | exon | 25522087 | 25522127 | 25522087 | ID=Msa1241780-mRNA-1:exon:8983;Parent=Msa1241780-mRNA-1 |
| chr8_2 | exon | 25522957 | 25523099 | 25522957 | ID=Msa1241780-mRNA-1:exon:8984;Parent=Msa1241780-mRNA-1 |
| chr8_2 | exon | 25523820 | 25524907 | 25523820 | ID=Msa1241780-mRNA-1:exon:8985;Parent=Msa1241780-mRNA-1 |
| chr8_2 | exon | 25524991 | 25525252 | 25524991 | ID=Msa1241780-mRNA-1:exon:8986;Parent=Msa1241780-mRNA-1 |
| chr8_2 | exon | 25525481 | 25525923 | 25525481 | ID=Msa1241780-mRNA-1:exon:8987;Parent=Msa1241780-mRNA-1 |
| chr8_2 | CDS | 25522087 | 25522127 | 25522087 | ID=Msa1241780-mRNA-1:cds;Parent=Msa1241780-mRNA-1 |
| chr8_2 | CDS | 25522957 | 25523099 | 25522957 | ID=Msa1241780-mRNA-1:cds;Parent=Msa1241780-mRNA-1 |
| chr8_2 | CDS | 25523820 | 25524907 | 25523820 | ID=Msa1241780-mRNA-1:cds;Parent=Msa1241780-mRNA-1 |
| chr8_2 | CDS | 25524991 | 25525252 | 25524991 | ID=Msa1241780-mRNA-1:cds;Parent=Msa1241780-mRNA-1 |
| chr8_2 | CDS | 25525481 | 25525659 | 25525481 | ID=Msa1241780-mRNA-1:cds;Parent=Msa1241780-mRNA-1 |
| chr8_2 | three_prime_UTR | 25525660 | 25525923 | 25525660 | ID=Msa1241780-mRNA-1:three_prime_utr;Parent=Msa1241780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
