AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0101180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0101180 MtrunA17_Chr1g0149521 98.266 346 4 1 1 344 1 346 0.0 694
Msa0101180 MtrunA17_Chr3g0126221 47.352 321 166 3 25 342 20 340 6.24e-112 329
Msa0101180 MtrunA17_Chr5g0396961 46.562 320 168 2 26 342 21 340 1.80e-107 318
Msa0101180 MtrunA17_Chr3g0115251 38.298 329 180 5 28 334 16 343 6.58e-73 231
Msa0101180 MtrunA17_Chr4g0024631 37.466 363 175 10 12 334 6 356 6.87e-68 218
Msa0101180 MtrunA17_Chr2g0322591 44.867 263 134 5 82 334 91 352 1.32e-64 209
Msa0101180 MtrunA17_Chr4g0004991 43.777 233 127 4 105 334 12 243 7.39e-64 204
Msa0101180 MtrunA17_Chr4g0017871 43.367 196 108 3 141 334 4 198 4.17e-55 180
Msa0101180 MtrunA17_Chr8g0360581 28.863 343 198 11 4 340 2 304 2.09e-37 137
Msa0101180 MtrunA17_Chr2g0316241 35.043 234 137 8 111 336 71 297 3.06e-35 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0101180 AT4G32120.1 76.879 346 77 2 1 344 1 345 0.0 555
Msa0101180 AT2G25300.1 74.063 347 86 2 1 344 1 346 0.0 535
Msa0101180 AT2G25300.2 77.695 269 59 1 76 344 1 268 5.30e-161 451
Msa0101180 AT5G53340.1 43.413 334 186 3 12 342 3 336 2.45e-99 297
Msa0101180 AT5G53340.2 43.413 334 185 4 12 342 3 335 2.35e-97 292
Msa0101180 AT1G05170.1 37.989 358 188 7 8 334 2 356 7.88e-75 235
Msa0101180 AT1G05170.2 37.989 358 188 7 8 334 2 356 5.63e-74 234
Msa0101180 AT1G32930.1 47.511 221 113 3 116 334 129 348 1.11e-69 223
Msa0101180 AT1G77810.2 46.396 222 116 3 115 334 113 333 1.18e-68 220
Msa0101180 AT1G77810.1 46.396 222 116 3 115 334 116 336 1.63e-68 219
Msa0101180 AT2G32430.1 38.857 350 179 8 17 334 12 358 1.12e-67 218
Msa0101180 AT1G33430.1 42.308 260 143 4 81 334 84 342 2.13e-65 212
Msa0101180 AT1G11730.1 42.578 256 142 5 83 334 79 333 5.27e-65 211
Msa0101180 AT1G33430.2 41.045 268 143 5 81 334 84 350 2.81e-62 204
Msa0101180 AT4G26940.1 39.104 335 173 11 27 334 27 357 3.77e-62 204
Msa0101180 AT1G22015.1 42.478 226 127 3 111 334 120 344 2.50e-57 191
Msa0101180 AT1G33430.3 43.172 227 122 4 79 299 82 307 1.47e-54 181
Msa0101180 AT1G53290.1 33.198 247 148 8 99 340 73 307 9.44e-36 133
Msa0101180 AT2G26100.1 36.404 228 134 7 115 336 108 330 1.50e-35 133
Msa0101180 AT2G26100.2 36.404 228 134 7 115 336 108 330 1.88e-35 132
Msa0101180 AT3G14960.1 33.333 228 141 7 115 336 82 304 5.28e-35 131
Msa0101180 AT4G26940.2 36.641 262 136 10 27 262 27 284 4.68e-33 125

Find 98 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAAAGACAAATCTTATT+AGG 0.127027 1_3:-7721214 None:intergenic
TGTTATACTTTCGAAGAATT+TGG 0.175766 1_3:+7719628 Msa0101180:CDS
CGTAGGCTTCTTGCTGTTAT+TGG 0.197350 1_3:+7714896 Msa0101180:CDS
GAACCTGATTGGTGGAAATT+TGG 0.211524 1_3:+7717773 Msa0101180:CDS
GGACTAAAATAAGAAAATTT+AGG 0.237121 1_3:-7721192 None:intergenic
TTTGCAGGAAGGAGGTAAAA+TGG 0.289393 1_3:-7713312 None:intergenic
TACAGTGGAAGATAAGTTAA+TGG 0.310767 1_3:+7714285 Msa0101180:CDS
AACCTGATTGGTGGAAATTT+GGG 0.317577 1_3:+7717774 Msa0101180:CDS
GGCCAGGATGGCGCATATAT+TGG 0.322926 1_3:+7717124 Msa0101180:CDS
AGATCATTGTAGGTATAAAA+AGG 0.329527 1_3:-7720952 None:intergenic
ATTGGAGTATATACTGGATT+TGG 0.331812 1_3:+7714914 Msa0101180:CDS
CACAGTACATTAACATAAAC+AGG 0.339769 1_3:+7719651 Msa0101180:CDS
ATAAAAGACAAATCTTATTA+GGG 0.348428 1_3:-7721213 None:intergenic
TTAGTACGGCGGTTCAGAAC+TGG 0.349681 1_3:+7716917 Msa0101180:CDS
GCTGTTATTGGAGTATATAC+TGG 0.356789 1_3:+7714908 Msa0101180:CDS
TCCCCAAATTTCCACCAATC+AGG 0.366321 1_3:-7717776 None:intergenic
TTTGCTGCCGTTGTCCTTTG+AGG 0.377114 1_3:-7714859 None:intergenic
GGTATGCTCGTTGGCTTGAT+TGG 0.377919 1_3:+7720806 Msa0101180:exon
CTTTCTTCTCTTGCGTCGCT+TGG 0.381177 1_3:+7713583 Msa0101180:CDS
TTTGAGGTACCCTTGGCTCT+TGG 0.386477 1_3:-7714843 None:intergenic
AAGAATGAACAGATCATTGT+AGG 0.399103 1_3:-7720962 None:intergenic
GGATTTGCATAAATATCAAT+TGG 0.403058 1_3:+7713436 Msa0101180:five_prime_UTR
CAAAGCTCTCAATGTTGTAT+TGG 0.404506 1_3:-7720911 None:intergenic
GAGGATTGTGGAAGCTGAGA+TGG 0.418121 1_3:+7714808 Msa0101180:CDS
AGGTATTTCCGACATGCATC+TGG 0.427162 1_3:+7719599 Msa0101180:intron
CGCTTCGAAGTCGATGTTGT+TGG 0.433801 1_3:-7713507 None:intergenic
TGTGTTGTTTATCAGGGATC+TGG 0.435095 1_3:+7714781 Msa0101180:intron
TGGAAGTGCTATATGATCAT+AGG 0.436840 1_3:+7721002 Msa0101180:three_prime_UTR
TCTTGACCGTCGACGTGGCC+AGG 0.439723 1_3:+7717108 Msa0101180:CDS
CTTGGCTTTACGTCGCCGGC+AGG 0.443966 1_3:+7713601 Msa0101180:CDS
AAAGGACAACGGCAGCAAAC+TGG 0.445483 1_3:+7714863 Msa0101180:CDS
GCCTATGATGATACAACATT+GGG 0.446536 1_3:+7720318 Msa0101180:CDS
GTCGCTTGGCTTTACGTCGC+CGG 0.447313 1_3:+7713597 Msa0101180:CDS
TCCCAATGTTGTATCATCAT+AGG 0.460275 1_3:-7720319 None:intergenic
GTTGTCCTTTGAGGTACCCT+TGG 0.464046 1_3:-7714850 None:intergenic
AATCAATCAATCTCAGAGAA+TGG 0.467511 1_3:+7713476 Msa0101180:exon
ATGATACAACATTGGGATCA+TGG 0.480900 1_3:+7720325 Msa0101180:CDS
CTCAAAAGAAATGTATTCAG+AGG 0.485779 1_3:+7714944 Msa0101180:CDS
AACATTGGGATCATGGATGA+TGG 0.485812 1_3:+7720332 Msa0101180:CDS
TCTTCCACTGTAAGAACCTT+AGG 0.488984 1_3:-7714274 None:intergenic
TAGTACGGCGGTTCAGAACT+GGG 0.489724 1_3:+7716918 Msa0101180:CDS
GAAGATAAGTTAATGGTACT+AGG 0.493625 1_3:+7714292 Msa0101180:CDS
TGTCGTCTATATATGTTGAT+TGG 0.496050 1_3:-7720359 None:intergenic
AAGAAAGCTAAGAGGAGAGA+AGG 0.498995 1_3:-7713567 None:intergenic
TCCAAGCTATCACCTCGATT+AGG 0.500386 1_3:-7716365 None:intergenic
TCGACTTCGAAGCGAGGAGG+AGG 0.501806 1_3:+7713516 Msa0101180:CDS
GTTTGTAGTAGCACTGTAGC+AGG 0.504873 1_3:+7713393 Msa0101180:five_prime_UTR
TTCAGATAAGGTATGCTCGT+TGG 0.505587 1_3:+7720797 Msa0101180:intron
TATATTGGATGCATGAAGTC+AGG 0.508194 1_3:+7717139 Msa0101180:CDS
GAAGTCAGGAGACGTGATAT+CGG 0.509651 1_3:+7717153 Msa0101180:CDS
TCCTAATCGAGGTGATAGCT+TGG 0.510536 1_3:+7716364 Msa0101180:CDS
ATCCAATATATGCGCCATCC+TGG 0.510550 1_3:-7717126 None:intergenic
GAAATGTATTCAGAGGGTCT+TGG 0.520604 1_3:+7714951 Msa0101180:CDS
CGCAAGAGAAGAAAGCTAAG+AGG 0.524066 1_3:-7713575 None:intergenic
TATGGCAAGATGCAGAGAAT+CGG 0.528498 1_3:+7713745 Msa0101180:CDS
TGCCTATGATGATACAACAT+TGG 0.539252 1_3:+7720317 Msa0101180:CDS
AGTTAATGGTACTAGGGTGC+AGG 0.541667 1_3:+7714299 Msa0101180:CDS
AGCTTTGGTATGAACCTGAT+TGG 0.546372 1_3:+7717762 Msa0101180:CDS
GACCGTCGACGTGGCCAGGA+TGG 0.547999 1_3:+7717112 Msa0101180:CDS
ACATGTTTCACTACTTGTCT+CGG 0.550864 1_3:+7720841 Msa0101180:three_prime_UTR
GACAGTATTGACATTGATCT+CGG 0.552540 1_3:+7716967 Msa0101180:CDS
CTTGGATCGCAATATTAATG+AGG 0.558938 1_3:+7716382 Msa0101180:CDS
GGATCTGGAGAGGAGGATTG+TGG 0.564661 1_3:+7714796 Msa0101180:CDS
TTGTCGTTGGCCAAGAGCCA+AGG 0.565453 1_3:+7714833 Msa0101180:CDS
CGCCATCCTGGCCACGTCGA+CGG 0.574272 1_3:-7717114 None:intergenic
TGTTGTATCATCATAGGCAT+AGG 0.581817 1_3:-7720313 None:intergenic
AAGATAAGTTAATGGTACTA+GGG 0.581844 1_3:+7714293 Msa0101180:CDS
AAACTGGTTCTTCTGACCGT+AGG 0.585093 1_3:+7714879 Msa0101180:CDS
TGCTGCAGTAGCATCAGTAA+AGG 0.586809 1_3:+7720390 Msa0101180:CDS
ACATTGGGATCATGGATGAT+GGG 0.589197 1_3:+7720333 Msa0101180:CDS
CGTTCAAGATAGAGAGACAG+AGG 0.591295 1_3:-7713366 None:intergenic
TTGATGATCAAATGTTGAAG+AGG 0.594852 1_3:+7721061 Msa0101180:three_prime_UTR
AGTAGCACTGTAGCAGGCGG+CGG 0.597555 1_3:+7713399 Msa0101180:five_prime_UTR
TCAAAAGAAATGTATTCAGA+GGG 0.598744 1_3:+7714945 Msa0101180:CDS
CAACATATATAGACGACAGT+CGG 0.602712 1_3:+7720364 Msa0101180:CDS
AAGAGCCAAGGGTACCTCAA+AGG 0.604992 1_3:+7714845 Msa0101180:CDS
AGCTGAGATGGAATTGTCGT+TGG 0.610971 1_3:+7714820 Msa0101180:CDS
AATATAATTTGCTGTCTGGG+TGG 0.623380 1_3:-7721138 None:intergenic
TAAAACAATAATAACAGAGG+AGG 0.624271 1_3:-7721025 None:intergenic
TGTCGTTGGCCAAGAGCCAA+GGG 0.624416 1_3:+7714834 Msa0101180:CDS
CAATAACAGCAAGAAGCCTA+CGG 0.624587 1_3:-7714895 None:intergenic
GTTATTGACAGTCCTAATCG+AGG 0.631555 1_3:+7716353 Msa0101180:intron
TTATCAGGGATCTGGAGAGG+AGG 0.631945 1_3:+7714789 Msa0101180:intron
TTTGGTATGAACCTGATTGG+TGG 0.633541 1_3:+7717765 Msa0101180:CDS
GCTCTTCTTGACCGTCGACG+TGG 0.635544 1_3:+7717103 Msa0101180:CDS
TGTTTATCAGGGATCTGGAG+AGG 0.646638 1_3:+7714786 Msa0101180:intron
ACCTGATTGGTGGAAATTTG+GGG 0.648422 1_3:+7717775 Msa0101180:CDS
GTGTAAAACAATAATAACAG+AGG 0.653761 1_3:-7721028 None:intergenic
CAAGCGAACCAGATGCATGT+CGG 0.657962 1_3:-7719607 None:intergenic
ACATCGACTTCGAAGCGAGG+AGG 0.661162 1_3:+7713513 Msa0101180:CDS
GAGGCCTAAGGTTCTTACAG+TGG 0.665617 1_3:+7714270 Msa0101180:intron
ACAACATCGACTTCGAAGCG+AGG 0.666683 1_3:+7713510 Msa0101180:CDS
AGAGGGTCTTGGATGCCTAG+AGG 0.683490 1_3:+7714962 Msa0101180:CDS
TGTAGTAGCACTGTAGCAGG+CGG 0.687915 1_3:+7713396 Msa0101180:five_prime_UTR
GAGACAAGTAGTGAAACATG+TGG 0.694102 1_3:-7720839 None:intergenic
AAGGGTACCTCAAAGGACAA+CGG 0.709836 1_3:+7714852 Msa0101180:CDS
GCGGCGGTAACAGAGAGTTG+AGG 0.722763 1_3:+7713415 Msa0101180:five_prime_UTR
TTCGTAATAGGAAAGTCACG+AGG 0.738840 1_3:+7716855 Msa0101180:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTTATTTTTTTT+TGG + chr1_3:7719539-7719558 Msa0101180:intron 0.0%
!!! ATTTTATTTATTTATTTTGC+AGG - chr1_3:7713330-7713349 None:intergenic 10.0%
!!! TTTATATATGTTTTTAGATT+CGG + chr1_3:7714354-7714373 Msa0101180:intron 10.0%
!! TTATACTATTAGAAAAAATT+TGG + chr1_3:7715334-7715353 Msa0101180:intron 10.0%
!!! TTATTATTTTGTTCATATTT+AGG + chr1_3:7715541-7715560 Msa0101180:intron 10.0%
!!! TTTTTTTTAAAAAAGAGTAT+TGG + chr1_3:7715628-7715647 Msa0101180:intron 10.0%
!!! TTTTCAAAAAAAAAAAGTAT+TGG + chr1_3:7715836-7715855 Msa0101180:intron 10.0%
!!! ATATATTATATATGCTTTTT+TGG + chr1_3:7715883-7715902 Msa0101180:intron 10.0%
!!! TTTCAATTTAAGATATATTA+AGG - chr1_3:7717892-7717911 None:intergenic 10.0%
!! TATTAAATATTCAATAATTC+AGG - chr1_3:7718953-7718972 None:intergenic 10.0%
!!! TTTTTTATTTTTTTTTGGAA+TGG + chr1_3:7719544-7719563 Msa0101180:intron 10.0%
!! AAAAATATAATATGATAGAT+TGG - chr1_3:7720628-7720647 None:intergenic 10.0%
!! AAAATAAATCACAATATCAT+AGG - chr1_3:7714241-7714260 None:intergenic 15.0%
!!! AATTATTCGTTCTTATTTAT+TGG - chr1_3:7714635-7714654 None:intergenic 15.0%
!! TCTTAATTGGAATTTAAATT+TGG + chr1_3:7715243-7715262 Msa0101180:intron 15.0%
!! CTTAATTGGAATTTAAATTT+GGG + chr1_3:7715244-7715263 Msa0101180:intron 15.0%
!!! GTTTTTAATTTATACTTTGA+TGG + chr1_3:7715386-7715405 Msa0101180:intron 15.0%
!! AAATATTAAAACTTATCCTA+GGG - chr1_3:7715454-7715473 None:intergenic 15.0%
!! AAAATATTAAAACTTATCCT+AGG - chr1_3:7715455-7715474 None:intergenic 15.0%
!!! ACTGAATTGTTTTTTAAATT+TGG + chr1_3:7716509-7716528 Msa0101180:intron 15.0%
!! TTCTTAAATATTTCAATCTT+AGG + chr1_3:7716635-7716654 Msa0101180:intron 15.0%
!! TCTTAAATATTTCAATCTTA+GGG + chr1_3:7716636-7716655 Msa0101180:intron 15.0%
!!! TTATTTGTTTTTGTTTATTC+AGG + chr1_3:7717848-7717867 Msa0101180:intron 15.0%
!! TAAGTACTAATAACAAAAAT+TGG + chr1_3:7717998-7718017 Msa0101180:intron 15.0%
!!! GGTTTTTTTTTTTTTACATT+TGG + chr1_3:7718444-7718463 Msa0101180:intron 15.0%
!!! TATAAATTTTTATCAGAATG+TGG + chr1_3:7718491-7718510 Msa0101180:intron 15.0%
!!! ATAAATTTTTATCAGAATGT+GGG + chr1_3:7718492-7718511 Msa0101180:intron 15.0%
!! ATAAAAATACTTATGTACAA+AGG - chr1_3:7719112-7719131 None:intergenic 15.0%
!! TCTAAATATATACAATACTT+TGG - chr1_3:7719278-7719297 None:intergenic 15.0%
!! CATATTCATATATAAGTTAA+GGG - chr1_3:7719329-7719348 None:intergenic 15.0%
!! ACATATTCATATATAAGTTA+AGG - chr1_3:7719330-7719349 None:intergenic 15.0%
!!! TGTTCTTTTAATATATAGAT+CGG + chr1_3:7719355-7719374 Msa0101180:intron 15.0%
!! ATACTACTAAAAAAGTAAAA+AGG - chr1_3:7719471-7719490 None:intergenic 15.0%
!!! TTTTTACTTTTTTAGTAGTA+TGG + chr1_3:7719470-7719489 Msa0101180:intron 15.0%
!!! ATTTTTAATAGCATGTTTTA+TGG - chr1_3:7719963-7719982 None:intergenic 15.0%
!! ATAAAAGACAAATCTTATTA+GGG - chr1_3:7721216-7721235 None:intergenic 15.0%
!!! TATTTATTTATTTTGCAGGA+AGG - chr1_3:7713326-7713345 None:intergenic 20.0%
!! AAATTAGAACTGAAAAGAAA+AGG - chr1_3:7713822-7713841 None:intergenic 20.0%
!!! ATTGAATTTTGAAATCCATA+TGG + chr1_3:7713888-7713907 Msa0101180:intron 20.0%
!!! TTGAAATTTGTGTTGTTTTT+AGG + chr1_3:7714185-7714204 Msa0101180:intron 20.0%
!! TGCAAATACAACAATTAAAA+AGG + chr1_3:7714657-7714676 Msa0101180:intron 20.0%
!!! TTTTATGATGTTGTTTTGTA+AGG + chr1_3:7714748-7714767 Msa0101180:intron 20.0%
!!! TTTATGATGTTGTTTTGTAA+GGG + chr1_3:7714749-7714768 Msa0101180:intron 20.0%
!!! CATTTATACTTTGATTTTGA+TGG + chr1_3:7715310-7715329 Msa0101180:intron 20.0%
!! AAAACTAGAAATCATGAAAA+TGG - chr1_3:7715419-7715438 None:intergenic 20.0%
!!! TTACTTTTTCATAATAGTAC+TGG + chr1_3:7715592-7715611 Msa0101180:intron 20.0%
!!! TAATTGAGTTGTTCATATTT+AGG + chr1_3:7715752-7715771 Msa0101180:intron 20.0%
!! TTTGTTGAGTATTATTTGTA+TGG + chr1_3:7716107-7716126 Msa0101180:intron 20.0%
!! ATTTGTATGGTTATCTTTAT+AGG + chr1_3:7716120-7716139 Msa0101180:intron 20.0%
!! ACTGTCAATAACAAATTTAA+AGG - chr1_3:7716345-7716364 None:intergenic 20.0%
!! ATCATAGATGCTTAAAATTT+AGG + chr1_3:7716535-7716554 Msa0101180:intron 20.0%
!! TCATAGATGCTTAAAATTTA+GGG + chr1_3:7716536-7716555 Msa0101180:intron 20.0%
!!! ATAATGCAAGTTTTAAATGA+GGG - chr1_3:7716615-7716634 None:intergenic 20.0%
!!! AATAATGCAAGTTTTAAATG+AGG - chr1_3:7716616-7716635 None:intergenic 20.0%
!!! TGGTTAAATTATTCTTTTTC+CGG + chr1_3:7716680-7716699 Msa0101180:intron 20.0%
!! AAAAACATTGATAAACACAA+TGG - chr1_3:7716750-7716769 None:intergenic 20.0%
!!! AAGAAGATTTTTGCTTTTTT+AGG - chr1_3:7716898-7716917 None:intergenic 20.0%
!! TATTTATGATAAAAGATGTG+TGG + chr1_3:7717214-7717233 Msa0101180:intron 20.0%
!! AATAATTCTGAACACAAAAA+TGG - chr1_3:7717354-7717373 None:intergenic 20.0%
!! GAATGTGTTAATTATCTTTA+GGG + chr1_3:7717457-7717476 Msa0101180:intron 20.0%
!! AGAAATATAAGTGTAATTCA+GGG - chr1_3:7717611-7717630 None:intergenic 20.0%
!! AAGAAATATAAGTGTAATTC+AGG - chr1_3:7717612-7717631 None:intergenic 20.0%
!!! GATTTTTCAATTGAGATTTT+TGG + chr1_3:7717701-7717720 Msa0101180:intron 20.0%
!! AACAACAAAGAATAATGTAT+TGG - chr1_3:7717915-7717934 None:intergenic 20.0%
!!! TGTTTTATCATTGAATTGAA+TGG + chr1_3:7717931-7717950 Msa0101180:intron 20.0%
!!! GTTTTATCATTGAATTGAAT+GGG + chr1_3:7717932-7717951 Msa0101180:intron 20.0%
!! ATGGGTAAATTAATAATCTT+TGG + chr1_3:7717950-7717969 Msa0101180:intron 20.0%
!! TACTAATAACAAAAATTGGA+GGG + chr1_3:7718002-7718021 Msa0101180:intron 20.0%
!! GCGTTTAAACAATATAAATT+TGG - chr1_3:7718090-7718109 None:intergenic 20.0%
!! CAATATGATTGAAACAATTT+AGG - chr1_3:7718129-7718148 None:intergenic 20.0%
!! TAAATATTCAATAATTCAGG+TGG - chr1_3:7718950-7718969 None:intergenic 20.0%
!! AAAAGATTAACAAGTTATCA+TGG - chr1_3:7719011-7719030 None:intergenic 20.0%
!! AAAAATAAAACAACTCAGTA+TGG - chr1_3:7719507-7719526 None:intergenic 20.0%
!!! TTTATTGCTTTATTGTCTTT+AGG + chr1_3:7719579-7719598 Msa0101180:intron 20.0%
!! ACGTCATGTATAATATTAAA+AGG - chr1_3:7720111-7720130 None:intergenic 20.0%
!! TGGAAAATGAAAATGTATTT+GGG + chr1_3:7720464-7720483 Msa0101180:intron 20.0%
!!! AAAAATATAATTTGCTGTCT+GGG - chr1_3:7721144-7721163 None:intergenic 20.0%
!! GGACTAAAATAAGAAAATTT+AGG - chr1_3:7721195-7721214 None:intergenic 20.0%
!! GATAAAAGACAAATCTTATT+AGG - chr1_3:7721217-7721236 None:intergenic 20.0%
! GGATTTGCATAAATATCAAT+TGG + chr1_3:7713436-7713455 Msa0101180:five_prime_UTR 25.0%
! GAATTGAAATGAATGAGAAT+CGG - chr1_3:7713641-7713660 None:intergenic 25.0%
! TTTGTGATATGAAACGTTAA+CGG + chr1_3:7713693-7713712 Msa0101180:intron 25.0%
!!! ATTTTGATCAAAAATGTGTC+AGG + chr1_3:7713721-7713740 Msa0101180:intron 25.0%
!!! GATTTATTTTTTGTTTCCAG+AGG + chr1_3:7714251-7714270 Msa0101180:intron 25.0%
! AAGATAAGTTAATGGTACTA+GGG + chr1_3:7714293-7714312 Msa0101180:CDS 25.0%
!! ATTCGTTCTTATTTATTGGT+TGG - chr1_3:7714631-7714650 None:intergenic 25.0%
! TCAAAAGAAATGTATTCAGA+GGG + chr1_3:7714945-7714964 Msa0101180:CDS 25.0%
! TCTACTGATATCAATTATGT+TGG + chr1_3:7715163-7715182 Msa0101180:intron 25.0%
!!! TTTTTTGTGATTCTCTAAGA+AGG + chr1_3:7715724-7715743 Msa0101180:intron 25.0%
!! ATGTCAATTTGAAGTTAACA+TGG - chr1_3:7716046-7716065 None:intergenic 25.0%
!!! TCTTTCTTCAAGTTTTTTCA+AGG - chr1_3:7716195-7716214 None:intergenic 25.0%
! TTGAAAAAACTTGAAGAAAG+AGG + chr1_3:7716194-7716213 Msa0101180:CDS 25.0%
! TATTAATATCATAGCCAGTA+TGG - chr1_3:7716268-7716287 None:intergenic 25.0%
!!! TAATGCAAGTTTTAAATGAG+GGG - chr1_3:7716614-7716633 None:intergenic 25.0%
!! TTAAATTATTCTTTTTCCGG+TGG + chr1_3:7716683-7716702 Msa0101180:intron 25.0%
! AGCAAAAATCTTCTTTAGTA+CGG + chr1_3:7716903-7716922 Msa0101180:CDS 25.0%
! AATACTGAATGCATGTATTT+AGG + chr1_3:7717002-7717021 Msa0101180:intron 25.0%
! GGGATGAAAATTAAGATAAT+CGG - chr1_3:7717434-7717453 None:intergenic 25.0%
! AGATAATTAACACATTCGAT+GGG - chr1_3:7717454-7717473 None:intergenic 25.0%
! AAGATAATTAACACATTCGA+TGG - chr1_3:7717455-7717474 None:intergenic 25.0%
! CGAATGTGTTAATTATCTTT+AGG + chr1_3:7717456-7717475 Msa0101180:intron 25.0%
!! CAAATCTTTTCTCATCTAAA+GGG - chr1_3:7717823-7717842 None:intergenic 25.0%
! AGATATATTAAGGCATAATC+AGG - chr1_3:7717882-7717901 None:intergenic 25.0%
! GTACTAATAACAAAAATTGG+AGG + chr1_3:7718001-7718020 Msa0101180:intron 25.0%
! AAGCAATGGATGTTATAAAT+AGG - chr1_3:7718420-7718439 None:intergenic 25.0%
! TAACAAGTTATCATGGAAAA+TGG - chr1_3:7719004-7719023 None:intergenic 25.0%
!! ATGTACAAAGGATAACTTTT+TGG - chr1_3:7719100-7719119 None:intergenic 25.0%
!! AATATATAGATCGGTTGATA+CGG + chr1_3:7719364-7719383 Msa0101180:intron 25.0%
! TATGGTATTATAACTCCTAA+TGG + chr1_3:7719387-7719406 Msa0101180:intron 25.0%
! GTCTCTATGTATAAATATTG+TGG + chr1_3:7719439-7719458 Msa0101180:intron 25.0%
! CTATGTATAAATATTGTGGA+TGG + chr1_3:7719443-7719462 Msa0101180:intron 25.0%
!!! TTTTTTAGTAGTATGGAGTA+TGG + chr1_3:7719477-7719496 Msa0101180:intron 25.0%
! TGTTATACTTTCGAAGAATT+TGG + chr1_3:7719628-7719647 Msa0101180:CDS 25.0%
!!! GATACACTACATTTTGTTTT+TGG - chr1_3:7720285-7720304 None:intergenic 25.0%
! GTGGAAAATGAAAATGTATT+TGG + chr1_3:7720463-7720482 Msa0101180:intron 25.0%
!! AGTTATCAATTTTACACTGA+CGG - chr1_3:7720603-7720622 None:intergenic 25.0%
!! AAGTTCAATTTTGTGAACTT+AGG - chr1_3:7720755-7720774 None:intergenic 25.0%
! AATTGAACTTGTCTTAATAG+TGG + chr1_3:7720765-7720784 Msa0101180:intron 25.0%
! GGTATAAAAAGGAATTCTAT+TGG - chr1_3:7720944-7720963 None:intergenic 25.0%
! AGATCATTGTAGGTATAAAA+AGG - chr1_3:7720955-7720974 None:intergenic 25.0%
!! CTTTTAGATACACTACATTA+TGG + chr1_3:7720982-7721001 Msa0101180:three_prime_UTR 25.0%
! TAAAACAATAATAACAGAGG+AGG - chr1_3:7721028-7721047 None:intergenic 25.0%
! GTGTAAAACAATAATAACAG+AGG - chr1_3:7721031-7721050 None:intergenic 25.0%
! AAGAGGAAAAAATTCAAAGA+AGG + chr1_3:7721078-7721097 Msa0101180:three_prime_UTR 25.0%
!! AAAAAATTCAAAGAAGGCAT+AGG + chr1_3:7721084-7721103 Msa0101180:three_prime_UTR 25.0%
!!! GAAAAATATAATTTGCTGTC+TGG - chr1_3:7721145-7721164 None:intergenic 25.0%
!!! TTATTTATTTTGCAGGAAGG+AGG - chr1_3:7713323-7713342 None:intergenic 30.0%
AATCAATCAATCTCAGAGAA+TGG + chr1_3:7713476-7713495 Msa0101180:exon 30.0%
ATCAAAAATGTGTCAGGTTA+TGG + chr1_3:7713727-7713746 Msa0101180:intron 30.0%
AATCAAATGCAATTTCGTCT+AGG - chr1_3:7714084-7714103 None:intergenic 30.0%
TACAGTGGAAGATAAGTTAA+TGG + chr1_3:7714285-7714304 Msa0101180:CDS 30.0%
GAAGATAAGTTAATGGTACT+AGG + chr1_3:7714292-7714311 Msa0101180:CDS 30.0%
!!! TTCGGTTGATTTGTTGTTTT+TGG + chr1_3:7714372-7714391 Msa0101180:intron 30.0%
TTAGTTATTTACCGAGAGAT+AGG - chr1_3:7714596-7714615 None:intergenic 30.0%
TATCTCTCGGTAAATAACTA+AGG + chr1_3:7714595-7714614 Msa0101180:intron 30.0%
ATCTCTCGGTAAATAACTAA+GGG + chr1_3:7714596-7714615 Msa0101180:intron 30.0%
TATTTGATATTTGACGACAC+TGG + chr1_3:7714724-7714743 Msa0101180:intron 30.0%
!! TTATGTGTGTGTTGTTTATC+AGG + chr1_3:7714774-7714793 Msa0101180:intron 30.0%
!! TATGTGTGTGTTGTTTATCA+GGG + chr1_3:7714775-7714794 Msa0101180:intron 30.0%
ATTGGAGTATATACTGGATT+TGG + chr1_3:7714914-7714933 Msa0101180:CDS 30.0%
CTCAAAAGAAATGTATTCAG+AGG + chr1_3:7714944-7714963 Msa0101180:CDS 30.0%
! CTCTTAATTTGAAATTGCGT+GGG + chr1_3:7715280-7715299 Msa0101180:intron 30.0%
!! TTTTCTATCTTTGTTTCCCT+AGG + chr1_3:7715435-7715454 Msa0101180:intron 30.0%
ATAATGAGAACGTAAACAGT+TGG + chr1_3:7715690-7715709 Msa0101180:intron 30.0%
AGAGAATCACAAAAAACTAG+AGG - chr1_3:7715720-7715739 None:intergenic 30.0%
AGAGAAACACAAAAAACAAG+AGG - chr1_3:7715936-7715955 None:intergenic 30.0%
!!! TTTTTTGTGTTTCTCTGAGA+AGG + chr1_3:7715940-7715959 Msa0101180:intron 30.0%
CTCTTGTGTAACTTCATATT+AGG - chr1_3:7716020-7716039 None:intergenic 30.0%
TTTCTCTTCAAATTTCTGTC+AGG + chr1_3:7716164-7716183 Msa0101180:intron 30.0%
! GTGATCATACGTTTTGTAAT+TGG + chr1_3:7716218-7716237 Msa0101180:CDS 30.0%
! TCATACGTTTTGTAATTGGT+CGG + chr1_3:7716222-7716241 Msa0101180:CDS 30.0%
! TCAAGAAATCTTTTGTTGAG+CGG - chr1_3:7716412-7716431 None:intergenic 30.0%
! ATTTAGGGTATTAACAGTTC+AGG + chr1_3:7716551-7716570 Msa0101180:intron 30.0%
! TTTAGGGTATTAACAGTTCA+GGG + chr1_3:7716552-7716571 Msa0101180:intron 30.0%
CCTATTACGAAAAAAACAGA+TGG - chr1_3:7716846-7716865 None:intergenic 30.0%
!!! CCATCTGTTTTTTTCGTAAT+AGG + chr1_3:7716843-7716862 Msa0101180:intron 30.0%
AAAAATCTTCTTTAGTACGG+CGG + chr1_3:7716906-7716925 Msa0101180:CDS 30.0%
CGAGTCTTAACTTTATTCAT+TGG + chr1_3:7717061-7717080 Msa0101180:intron 30.0%
ATCAGAGTTAGTTCAGATAA+AGG - chr1_3:7717190-7717209 None:intergenic 30.0%
CATCTACACTACATAAAAAC+TGG - chr1_3:7717249-7717268 None:intergenic 30.0%
! CAGTTTTTATGTAGTGTAGA+TGG + chr1_3:7717247-7717266 Msa0101180:intron 30.0%
AGCTCAAAGAAAAATCTTCT+AGG - chr1_3:7717274-7717293 None:intergenic 30.0%
AAATTTCCTTGGCAAATATG+AGG - chr1_3:7717486-7717505 None:intergenic 30.0%
TAGTCATTAACACATTCGAT+GGG - chr1_3:7717532-7717551 None:intergenic 30.0%
TTAGTCATTAACACATTCGA+TGG - chr1_3:7717533-7717552 None:intergenic 30.0%
!!! AAGCTCCTTATTTTGTTTTC+AGG + chr1_3:7717735-7717754 Msa0101180:intron 30.0%
!!! AGCTCCTTATTTTGTTTTCA+GGG + chr1_3:7717736-7717755 Msa0101180:intron 30.0%
TTTCCCCTGAAAACAAAATA+AGG - chr1_3:7717743-7717762 None:intergenic 30.0%
! CCAAATCTTTTCTCATCTAA+AGG - chr1_3:7717824-7717843 None:intergenic 30.0%
CCTTTAGATGAGAAAAGATT+TGG + chr1_3:7717821-7717840 Msa0101180:intron 30.0%
! TAATTGGTGATTGCATGTAA+AGG - chr1_3:7718192-7718211 None:intergenic 30.0%
TACATGCAATCACCAATTAA+TGG + chr1_3:7718193-7718212 Msa0101180:intron 30.0%
! ATTAAACCCCATATGGTTTT+GGG - chr1_3:7718282-7718301 None:intergenic 30.0%
TTATAACATCCATTGCTTGT+AGG + chr1_3:7718422-7718441 Msa0101180:intron 30.0%
TATAACATCCATTGCTTGTA+GGG + chr1_3:7718423-7718442 Msa0101180:intron 30.0%
AAAAAAAACCCTACAAGCAA+TGG - chr1_3:7718434-7718453 None:intergenic 30.0%
! CGCTGTAAATTTTCAGTTTT+AGG - chr1_3:7718540-7718559 None:intergenic 30.0%
TTGAACAAGTTACCATTATG+AGG + chr1_3:7718563-7718582 Msa0101180:intron 30.0%
TGAACAAGTTACCATTATGA+GGG + chr1_3:7718564-7718583 Msa0101180:intron 30.0%
TGGTTCAAATACCATTATGA+GGG - chr1_3:7718672-7718691 None:intergenic 30.0%
GCAACAAAATACCATTATGA+GGG + chr1_3:7718713-7718732 Msa0101180:intron 30.0%
CAATAATGATGAAGGAAAAC+CGG - chr1_3:7718915-7718934 None:intergenic 30.0%
!! ATACTTTGGAATCAAGTGAT+GGG - chr1_3:7719264-7719283 None:intergenic 30.0%
!! AATACTTTGGAATCAAGTGA+TGG - chr1_3:7719265-7719284 None:intergenic 30.0%
TATATAAGTTAAGGGACACA+TGG - chr1_3:7719321-7719340 None:intergenic 30.0%
CACAGTACATTAACATAAAC+AGG + chr1_3:7719651-7719670 Msa0101180:CDS 30.0%
ATCATCCAAAATGCTAATTG+AGG - chr1_3:7719767-7719786 None:intergenic 30.0%
AGTAGGGTTTGGATATTAAT+TGG + chr1_3:7719832-7719851 Msa0101180:intron 30.0%
ATGTTCCTATTTCCAAGAAT+AGG + chr1_3:7719929-7719948 Msa0101180:intron 30.0%
! AAGATGCAATAATTTGTGCT+TGG - chr1_3:7720142-7720161 None:intergenic 30.0%
AGCACAAATTATTGCATCTT+CGG + chr1_3:7720142-7720161 Msa0101180:intron 30.0%
TGTCGTCTATATATGTTGAT+TGG - chr1_3:7720362-7720381 None:intergenic 30.0%
! TTCATTTTCCACAGATTCAA+TGG - chr1_3:7720455-7720474 None:intergenic 30.0%
AAGCACAATCAGTGTAAATT+AGG - chr1_3:7720691-7720710 None:intergenic 30.0%
! AATTTTGTGAACTTAGGTAG+GGG - chr1_3:7720749-7720768 None:intergenic 30.0%
! CAATTTTGTGAACTTAGGTA+GGG - chr1_3:7720750-7720769 None:intergenic 30.0%
! TCAATTTTGTGAACTTAGGT+AGG - chr1_3:7720751-7720770 None:intergenic 30.0%
! TGGTATCCAATTTTCAGATA+AGG + chr1_3:7720785-7720804 Msa0101180:intron 30.0%
AGCATACCTTATCTGAAAAT+TGG - chr1_3:7720794-7720813 None:intergenic 30.0%
AAGAATGAACAGATCATTGT+AGG - chr1_3:7720965-7720984 None:intergenic 30.0%
! TTGATGATCAAATGTTGAAG+AGG + chr1_3:7721061-7721080 Msa0101180:three_prime_UTR 30.0%
!! ATTTTTCCGTTTTTCTCTTG+CGG + chr1_3:7721158-7721177 Msa0101180:three_prime_UTR 30.0%
GAAATGAATGAGAATCGGAT+CGG - chr1_3:7713636-7713655 None:intergenic 35.0%
TCTCAAAAAGAATTCAGCAC+AGG + chr1_3:7713785-7713804 Msa0101180:CDS 35.0%
! CCATATGGTTTTTGCTTGTT+CGG + chr1_3:7713903-7713922 Msa0101180:intron 35.0%
!!! TCTCTGTAGTTGTCGTTTTA+AGG + chr1_3:7714461-7714480 Msa0101180:intron 35.0%
CAACATCTATTCCTATCTCT+CGG + chr1_3:7714582-7714601 Msa0101180:intron 35.0%
AAATATAGCGTGTAGTGCAA+CGG - chr1_3:7714709-7714728 None:intergenic 35.0%
GCTGTTATTGGAGTATATAC+TGG + chr1_3:7714908-7714927 Msa0101180:CDS 35.0%
! CTAGAGGTATGTTTGGAATT+CGG + chr1_3:7714978-7714997 Msa0101180:intron 35.0%
!!! TCGTCTTTTTTTGGTTACGA+AGG + chr1_3:7715039-7715058 Msa0101180:intron 35.0%
!!! TCTTTTTTTGGTTACGAAGG+AGG + chr1_3:7715042-7715061 Msa0101180:intron 35.0%
TAGTAGTTAGTAGAAGACAG+TGG + chr1_3:7715220-7715239 Msa0101180:intron 35.0%
! TAGAAGACAGTGGTCTTAAT+TGG + chr1_3:7715230-7715249 Msa0101180:intron 35.0%
CCACGCAATTTCAAATTAAG+AGG - chr1_3:7715282-7715301 None:intergenic 35.0%
! CCTCTTAATTTGAAATTGCG+TGG + chr1_3:7715279-7715298 Msa0101180:intron 35.0%
! GCAACTTTTCATAATAGTGC+TGG + chr1_3:7715802-7715821 Msa0101180:intron 35.0%
!! AGTATTGGTTTAGTAAGTCG+CGG + chr1_3:7715851-7715870 Msa0101180:intron 35.0%
ATGATGAGAACGTAAACAGT+TGG + chr1_3:7715906-7715925 Msa0101180:intron 35.0%
CTTGGATCGCAATATTAATG+AGG + chr1_3:7716382-7716401 Msa0101180:CDS 35.0%
ATTAGCTCAATCCTTTACCT+TGG + chr1_3:7716464-7716483 Msa0101180:intron 35.0%
! CATCAAAACTTTAGTTCCAC+CGG - chr1_3:7716702-7716721 None:intergenic 35.0%
!! GGTGGAACTAAAGTTTTGAT+GGG + chr1_3:7716701-7716720 Msa0101180:intron 35.0%
!! GAACTAAAGTTTTGATGGGA+TGG + chr1_3:7716705-7716724 Msa0101180:intron 35.0%
TTCAACAAGGTTCAATGACA+TGG - chr1_3:7716802-7716821 None:intergenic 35.0%
! TATACTGAGCTTGTTCAACA+AGG - chr1_3:7716815-7716834 None:intergenic 35.0%
!! GACAGTATTGACATTGATCT+CGG + chr1_3:7716967-7716986 Msa0101180:CDS 35.0%
AGTTAAGACTCGATTTCACA+TGG - chr1_3:7717053-7717072 None:intergenic 35.0%
! TTTATTCATTGGCCTAACAG+AGG + chr1_3:7717072-7717091 Msa0101180:intron 35.0%
! TTATTCATTGGCCTAACAGA+GGG + chr1_3:7717073-7717092 Msa0101180:intron 35.0%
TATATTGGATGCATGAAGTC+AGG + chr1_3:7717139-7717158 Msa0101180:CDS 35.0%
CTGAACACAAAAATGGATAC+TGG - chr1_3:7717347-7717366 None:intergenic 35.0%
!!! GCTCCTTATTTTGTTTTCAG+GGG + chr1_3:7717737-7717756 Msa0101180:intron 35.0%
AACCTGATTGGTGGAAATTT+GGG + chr1_3:7717774-7717793 Msa0101180:CDS 35.0%
AAGAGATGACAGCATATAAC+AGG - chr1_3:7718065-7718084 None:intergenic 35.0%
CACCAATTAATGGAATCATC+TGG + chr1_3:7718203-7718222 Msa0101180:intron 35.0%
GACCAGATGATTCCATTAAT+TGG - chr1_3:7718208-7718227 None:intergenic 35.0%
TGAGTAGTGATGTGAAAAAC+TGG + chr1_3:7718250-7718269 Msa0101180:intron 35.0%
GATAATGCCCAAAACCATAT+GGG + chr1_3:7718272-7718291 Msa0101180:intron 35.0%
ATAATGCCCAAAACCATATG+GGG + chr1_3:7718273-7718292 Msa0101180:intron 35.0%
! CATTAAACCCCATATGGTTT+TGG - chr1_3:7718283-7718302 None:intergenic 35.0%
CAAAACCATATGGGGTTTAA+TGG + chr1_3:7718281-7718300 Msa0101180:intron 35.0%
! GAGTTTGATAGCATTAACCA+TGG + chr1_3:7718337-7718356 Msa0101180:intron 35.0%
! TCTATTTTCCTTCTCTACCA+TGG - chr1_3:7718357-7718376 None:intergenic 35.0%
!!! TTCAGTTTTAGGTTCTTCCA+TGG - chr1_3:7718529-7718548 None:intergenic 35.0%
GTGGTTCAAATACCATTATG+AGG - chr1_3:7718673-7718692 None:intergenic 35.0%
CGCAACAAAATACCATTATG+AGG + chr1_3:7718712-7718731 Msa0101180:intron 35.0%
!!! TTTTTTGCATGCCCTCATAA+TGG - chr1_3:7718727-7718746 None:intergenic 35.0%
CATTATGACCATCCTTTCAT+CGG + chr1_3:7718857-7718876 Msa0101180:intron 35.0%
ATTATGACCATCCTTTCATC+GGG + chr1_3:7718858-7718877 Msa0101180:intron 35.0%
TTATCATGGAAAATGGTGAC+AGG - chr1_3:7718997-7719016 None:intergenic 35.0%
TTTATCATAGTTTCCAGCAC+AGG + chr1_3:7719127-7719146 Msa0101180:intron 35.0%
AGAATGTAGAACTCTTTGAC+AGG + chr1_3:7719295-7719314 Msa0101180:intron 35.0%
! TGCAACATGCATTTTCCATT+AGG - chr1_3:7719405-7719424 None:intergenic 35.0%
AAAGCAATAAAGATCAACGC+TGG - chr1_3:7719570-7719589 None:intergenic 35.0%
!! CTCAATGTCTTATTTGCACA+AGG + chr1_3:7719680-7719699 Msa0101180:intron 35.0%
!! AATGTCTTATTTGCACAAGG+AGG + chr1_3:7719683-7719702 Msa0101180:intron 35.0%
CATCTAGATGTCCTAATGTT+CGG + chr1_3:7719796-7719815 Msa0101180:intron 35.0%
TTCTCAATTAGCCGAACATT+AGG - chr1_3:7719810-7719829 None:intergenic 35.0%
AATTGAGAATGAGTAGGGTT+TGG + chr1_3:7719821-7719840 Msa0101180:intron 35.0%
TGTGTCCTATTCTTGGAAAT+AGG - chr1_3:7719937-7719956 None:intergenic 35.0%
GATTGGTATTCTTTCCTGTT+TGG + chr1_3:7720067-7720086 Msa0101180:intron 35.0%
! GATTTTTCTCTCAACCAAAC+AGG - chr1_3:7720084-7720103 None:intergenic 35.0%
GCACAAATTATTGCATCTTC+GGG + chr1_3:7720143-7720162 Msa0101180:intron 35.0%
TGTTGTATCATCATAGGCAT+AGG - chr1_3:7720316-7720335 None:intergenic 35.0%
TGCCTATGATGATACAACAT+TGG + chr1_3:7720317-7720336 Msa0101180:CDS 35.0%
GCCTATGATGATACAACATT+GGG + chr1_3:7720318-7720337 Msa0101180:CDS 35.0%
TCCCAATGTTGTATCATCAT+AGG - chr1_3:7720322-7720341 None:intergenic 35.0%
ATGATACAACATTGGGATCA+TGG + chr1_3:7720325-7720344 Msa0101180:CDS 35.0%
CAACATATATAGACGACAGT+CGG + chr1_3:7720364-7720383 Msa0101180:CDS 35.0%
AAAGTAGTGACTGAAACATG+AGG - chr1_3:7720428-7720447 None:intergenic 35.0%
CTTTATGACCATTGAATCTG+TGG + chr1_3:7720444-7720463 Msa0101180:intron 35.0%
ACATGTTTCACTACTTGTCT+CGG + chr1_3:7720841-7720860 Msa0101180:three_prime_UTR 35.0%
CAAAGCTCTCAATGTTGTAT+TGG - chr1_3:7720914-7720933 None:intergenic 35.0%
!! TGGAAGTGCTATATGATCAT+AGG + chr1_3:7721002-7721021 Msa0101180:three_prime_UTR 35.0%
!! AATATAATTTGCTGTCTGGG+TGG - chr1_3:7721141-7721160 None:intergenic 35.0%
TTTGCAGGAAGGAGGTAAAA+TGG - chr1_3:7713315-7713334 None:intergenic 40.0%
AAGAAAGCTAAGAGGAGAGA+AGG - chr1_3:7713570-7713589 None:intergenic 40.0%
ATGAGAATCGGATCGGAATA+AGG - chr1_3:7713629-7713648 None:intergenic 40.0%
TATGGCAAGATGCAGAGAAT+CGG + chr1_3:7713745-7713764 Msa0101180:CDS 40.0%
CCGAACAAGCAAAAACCATA+TGG - chr1_3:7713906-7713925 None:intergenic 40.0%
!! CTTTTGATCGAAGGCATGTT+CGG + chr1_3:7714032-7714051 Msa0101180:intron 40.0%
AAGCACTAACAACACAGACA+TGG - chr1_3:7714144-7714163 None:intergenic 40.0%
!! TTTTTGTTTCCAGAGGCCTA+AGG + chr1_3:7714258-7714277 Msa0101180:intron 40.0%
TCTTCCACTGTAAGAACCTT+AGG - chr1_3:7714277-7714296 None:intergenic 40.0%
!! TGTGTTGTTTATCAGGGATC+TGG + chr1_3:7714781-7714800 Msa0101180:intron 40.0%
CAATAACAGCAAGAAGCCTA+CGG - chr1_3:7714898-7714917 None:intergenic 40.0%
GAAATGTATTCAGAGGGTCT+TGG + chr1_3:7714951-7714970 Msa0101180:CDS 40.0%
CGAATTCCAAACATACCTCT+AGG - chr1_3:7714980-7714999 None:intergenic 40.0%
!!! GTGCTTCAGTCGTCTTTTTT+TGG + chr1_3:7715030-7715049 Msa0101180:intron 40.0%
AGGCTAAAGTAGAGGCAAAT+TGG + chr1_3:7715095-7715114 Msa0101180:intron 40.0%
TTAAAGATGTAATGCACCGC+AGG + chr1_3:7715487-7715506 Msa0101180:intron 40.0%
!!! GTGTTTTAACACAATGCCTG+CGG - chr1_3:7715506-7715525 None:intergenic 40.0%
! TACGTTTTGTAATTGGTCGG+AGG + chr1_3:7716225-7716244 Msa0101180:CDS 40.0%
GTTATTGACAGTCCTAATCG+AGG + chr1_3:7716353-7716372 Msa0101180:intron 40.0%
!! CGGTGGAACTAAAGTTTTGA+TGG + chr1_3:7716700-7716719 Msa0101180:intron 40.0%
TTCGTAATAGGAAAGTCACG+AGG + chr1_3:7716855-7716874 Msa0101180:intron 40.0%
GACATTGATCTCGGTAATGA+TGG + chr1_3:7716976-7716995 Msa0101180:intron 40.0%
GAGCAATTAAACCCTCTGTT+AGG - chr1_3:7717087-7717106 None:intergenic 40.0%
ATCCACAGATGTGGTAACTT+CGG - chr1_3:7717407-7717426 None:intergenic 40.0%
AGGGAGAAAAGATTAAGCAC+AGG - chr1_3:7717592-7717611 None:intergenic 40.0%
!! TTGTTTTCAGGGGAAAGCTT+TGG + chr1_3:7717747-7717766 Msa0101180:intron 40.0%
! AGCTTTGGTATGAACCTGAT+TGG + chr1_3:7717762-7717781 Msa0101180:CDS 40.0%
TTTGGTATGAACCTGATTGG+TGG + chr1_3:7717765-7717784 Msa0101180:CDS 40.0%
GAACCTGATTGGTGGAAATT+TGG + chr1_3:7717773-7717792 Msa0101180:CDS 40.0%
ACCTGATTGGTGGAAATTTG+GGG + chr1_3:7717775-7717794 Msa0101180:CDS 40.0%
GGATAATGCCCAAAACCATA+TGG + chr1_3:7718271-7718290 Msa0101180:intron 40.0%
GCAATCCATTAAACCCCATA+TGG - chr1_3:7718289-7718308 None:intergenic 40.0%
AGCATTAACCATGGTAGAGA+AGG + chr1_3:7718346-7718365 Msa0101180:intron 40.0%
TGTGGGTATAATAGTGTCCA+TGG + chr1_3:7718509-7718528 Msa0101180:intron 40.0%
!! ACACGTTGGTGGTTACAAAT+AGG - chr1_3:7718604-7718623 None:intergenic 40.0%
TCACAACTATGTCACAACGT+TGG + chr1_3:7718623-7718642 Msa0101180:intron 40.0%
!! CAACGTTGGTGGTTACAAAT+AGG + chr1_3:7718637-7718656 Msa0101180:intron 40.0%
ATGACAATGGCAGTAAAGAC+GGG - chr1_3:7718771-7718790 None:intergenic 40.0%
GATGACAATGGCAGTAAAGA+CGG - chr1_3:7718772-7718791 None:intergenic 40.0%
! ACGATGACTGATGATGACAA+TGG - chr1_3:7718784-7718803 None:intergenic 40.0%
GAGTCCTAGTCAAGATATAG+CGG - chr1_3:7718825-7718844 None:intergenic 40.0%
GATGGTCATAATGGTAACAG+AGG - chr1_3:7718850-7718869 None:intergenic 40.0%
CGATGAAAGGATGGTCATAA+TGG - chr1_3:7718859-7718878 None:intergenic 40.0%
! GATGACGGCAATAATGATGA+AGG - chr1_3:7718923-7718942 None:intergenic 40.0%
! AATTCAGGTGGTGATGATGA+CGG - chr1_3:7718938-7718957 None:intergenic 40.0%
GGAAAATGGTGACAGGAATA+TGG - chr1_3:7718990-7719009 None:intergenic 40.0%
CTAGTATTATTGACCTGTGC+TGG - chr1_3:7719143-7719162 None:intergenic 40.0%
! ATAGATCGGTTGATACGGTA+TGG + chr1_3:7719369-7719388 Msa0101180:intron 40.0%
!!! ACTGCCTAGCTTTAGTTTTG+TGG + chr1_3:7719733-7719752 Msa0101180:intron 40.0%
CATGCCACAAAACTAAAGCT+AGG - chr1_3:7719740-7719759 None:intergenic 40.0%
!!! CTAGCTTTAGTTTTGTGGCA+TGG + chr1_3:7719738-7719757 Msa0101180:intron 40.0%
TCGGCTAATTGAGAATGAGT+AGG + chr1_3:7719815-7719834 Msa0101180:intron 40.0%
CGGCTAATTGAGAATGAGTA+GGG + chr1_3:7719816-7719835 Msa0101180:intron 40.0%
ATTGCACTGTGCCATATTCT+TGG + chr1_3:7719857-7719876 Msa0101180:intron 40.0%
TCCAATACCAGCCAAGAATA+TGG - chr1_3:7719871-7719890 None:intergenic 40.0%
!! ATGGTGTTGTGTCCTATTCT+TGG - chr1_3:7719944-7719963 None:intergenic 40.0%
! ATACCAATCTGACTGGCTAT+AGG - chr1_3:7720056-7720075 None:intergenic 40.0%
GGAAAGAATACCAATCTGAC+TGG - chr1_3:7720063-7720082 None:intergenic 40.0%
CAAATTATTGCATCTTCGGG+TGG + chr1_3:7720146-7720165 Msa0101180:intron 40.0%
AACATTGGGATCATGGATGA+TGG + chr1_3:7720332-7720351 Msa0101180:CDS 40.0%
ACATTGGGATCATGGATGAT+GGG + chr1_3:7720333-7720352 Msa0101180:CDS 40.0%
GTGACTGAAACATGAGGATT+GGG - chr1_3:7720422-7720441 None:intergenic 40.0%
AGTGACTGAAACATGAGGAT+TGG - chr1_3:7720423-7720442 None:intergenic 40.0%
TTCAGATAAGGTATGCTCGT+TGG + chr1_3:7720797-7720816 Msa0101180:intron 40.0%
GAGACAAGTAGTGAAACATG+TGG - chr1_3:7720842-7720861 None:intergenic 40.0%
!! AAAGCACCGCAAGAGAAAAA+CGG - chr1_3:7721167-7721186 None:intergenic 40.0%
CGTTCAAGATAGAGAGACAG+AGG - chr1_3:7713369-7713388 None:intergenic 45.0%
GTTTGTAGTAGCACTGTAGC+AGG + chr1_3:7713393-7713412 Msa0101180:five_prime_UTR 45.0%
CGCAAGAGAAGAAAGCTAAG+AGG - chr1_3:7713578-7713597 None:intergenic 45.0%
GCTTGTTCGGATATGAAGCA+CGG + chr1_3:7713916-7713935 Msa0101180:intron 45.0%
! AGCATGACGCTTTTGATCGA+AGG + chr1_3:7714023-7714042 Msa0101180:intron 45.0%
AGTTAATGGTACTAGGGTGC+AGG + chr1_3:7714299-7714318 Msa0101180:CDS 45.0%
TGTTTATCAGGGATCTGGAG+AGG + chr1_3:7714786-7714805 Msa0101180:intron 45.0%
AGCTGAGATGGAATTGTCGT+TGG + chr1_3:7714820-7714839 Msa0101180:CDS 45.0%
!! AAGGGTACCTCAAAGGACAA+CGG + chr1_3:7714852-7714871 Msa0101180:CDS 45.0%
! AAACTGGTTCTTCTGACCGT+AGG + chr1_3:7714879-7714898 Msa0101180:CDS 45.0%
!! CGTAGGCTTCTTGCTGTTAT+TGG + chr1_3:7714896-7714915 Msa0101180:CDS 45.0%
! TGGATGCCTAGAGGTATGTT+TGG + chr1_3:7714971-7714990 Msa0101180:intron 45.0%
! AGGAGGTTTGAGACTTTGTC+TGG + chr1_3:7715059-7715078 Msa0101180:intron 45.0%
TTGAGACTTTGTCTGGTGAG+AGG + chr1_3:7715066-7715085 Msa0101180:intron 45.0%
! AAGTAGAGGCAAATTGGCCT+TGG + chr1_3:7715101-7715120 Msa0101180:intron 45.0%
CCTAAGATCAAGTCTCACCA+AGG - chr1_3:7715121-7715140 None:intergenic 45.0%
CCTTGGTGAGACTTGATCTT+AGG + chr1_3:7715118-7715137 Msa0101180:intron 45.0%
! ATGCTTCTTGACTAGTTCGC+TGG + chr1_3:7716070-7716089 Msa0101180:intron 45.0%
TTCCACGCACTTATCCATAC+TGG + chr1_3:7716251-7716270 Msa0101180:intron 45.0%
TCCTAATCGAGGTGATAGCT+TGG + chr1_3:7716364-7716383 Msa0101180:CDS 45.0%
TCCAAGCTATCACCTCGATT+AGG - chr1_3:7716368-7716387 None:intergenic 45.0%
ACTCGCACAATCCAAGGTAA+AGG - chr1_3:7716478-7716497 None:intergenic 45.0%
TTTACCTTGGATTGTGCGAG+TGG + chr1_3:7716477-7716496 Msa0101180:intron 45.0%
!! GGAGACTTGAAGCATTGATG+TGG + chr1_3:7716657-7716676 Msa0101180:intron 45.0%
!! GACTTGAAGCATTGATGTGG+TGG + chr1_3:7716660-7716679 Msa0101180:intron 45.0%
!! GTTTTGATGGGATGGAGCAA+AGG + chr1_3:7716713-7716732 Msa0101180:intron 45.0%
ATCCAATATATGCGCCATCC+TGG - chr1_3:7717129-7717148 None:intergenic 45.0%
GAAGTCAGGAGACGTGATAT+CGG + chr1_3:7717153-7717172 Msa0101180:CDS 45.0%
CCAGGGAATGCAAATTTCCT+TGG - chr1_3:7717497-7717516 None:intergenic 45.0%
CCAAGGAAATTTGCATTCCC+TGG + chr1_3:7717494-7717513 Msa0101180:intron 45.0%
TCCCCAAATTTCCACCAATC+AGG - chr1_3:7717779-7717798 None:intergenic 45.0%
TACCATTATGAGGGCAACGT+TGG + chr1_3:7718573-7718592 Msa0101180:intron 45.0%
TACCAACGTTGCCCTCATAA+TGG - chr1_3:7718578-7718597 None:intergenic 45.0%
ACATAGTTGTGACACGTTGG+TGG - chr1_3:7718615-7718634 None:intergenic 45.0%
GTGACATAGTTGTGACACGT+TGG - chr1_3:7718618-7718637 None:intergenic 45.0%
CAACTATGTCACAACGTTGG+TGG + chr1_3:7718626-7718645 Msa0101180:intron 45.0%
ACAAAGTTGTGACACGTTGG+TGG - chr1_3:7718692-7718711 None:intergenic 45.0%
CAAGATATAGCGGCTAGTGA+CGG - chr1_3:7718815-7718834 None:intergenic 45.0%
CTAGCCGCTATATCTTGACT+AGG + chr1_3:7718818-7718837 Msa0101180:intron 45.0%
AGGTATTTCCGACATGCATC+TGG + chr1_3:7719599-7719618 Msa0101180:intron 45.0%
!!! GCTTTAGTTTTGTGGCATGG+CGG + chr1_3:7719741-7719760 Msa0101180:intron 45.0%
! GCATTTTGGATGATGCAGTG+TGG + chr1_3:7719773-7719792 Msa0101180:intron 45.0%
GCCATATTCTTGGCTGGTAT+TGG + chr1_3:7719867-7719886 Msa0101180:intron 45.0%
CTTGTCAGCTCTCTCAACTA+TGG - chr1_3:7720017-7720036 None:intergenic 45.0%
TAGTTGAGAGAGCTGACAAG+AGG + chr1_3:7720017-7720036 Msa0101180:intron 45.0%
GAACCTATAGCCAGTCAGAT+TGG + chr1_3:7720050-7720069 Msa0101180:intron 45.0%
TGCTGCAGTAGCATCAGTAA+AGG + chr1_3:7720390-7720409 Msa0101180:CDS 45.0%
!! ATAATAATAAAAAATTATCA+AGG - chr1_3:7715528-7715547 None:intergenic 5.0%
!!! ATTTTTTTAAAAAAAAACTA+TGG - chr1_3:7717378-7717397 None:intergenic 5.0%
!! AAAAAATTTATAAAACAAAA+TGG - chr1_3:7717673-7717692 None:intergenic 5.0%
TGTAGTAGCACTGTAGCAGG+CGG + chr1_3:7713396-7713415 Msa0101180:five_prime_UTR 50.0%
CGCTTCGAAGTCGATGTTGT+TGG - chr1_3:7713510-7713529 None:intergenic 50.0%
!! ACAACATCGACTTCGAAGCG+AGG + chr1_3:7713510-7713529 Msa0101180:CDS 50.0%
CTTTCTTCTCTTGCGTCGCT+TGG + chr1_3:7713583-7713602 Msa0101180:CDS 50.0%
GATCGGAATAAGGAACCTGC+CGG - chr1_3:7713619-7713638 None:intergenic 50.0%
CTGTAAGAACCTTAGGCCTC+TGG - chr1_3:7714270-7714289 None:intergenic 50.0%
GAGGCCTAAGGTTCTTACAG+TGG + chr1_3:7714270-7714289 Msa0101180:intron 50.0%
TTATCAGGGATCTGGAGAGG+AGG + chr1_3:7714789-7714808 Msa0101180:intron 50.0%
GAGGATTGTGGAAGCTGAGA+TGG + chr1_3:7714808-7714827 Msa0101180:CDS 50.0%
! TTTGAGGTACCCTTGGCTCT+TGG - chr1_3:7714846-7714865 None:intergenic 50.0%
!! AAGAGCCAAGGGTACCTCAA+AGG + chr1_3:7714845-7714864 Msa0101180:CDS 50.0%
!! GTTGTCCTTTGAGGTACCCT+TGG - chr1_3:7714853-7714872 None:intergenic 50.0%
TTTGCTGCCGTTGTCCTTTG+AGG - chr1_3:7714862-7714881 None:intergenic 50.0%
AAAGGACAACGGCAGCAAAC+TGG + chr1_3:7714863-7714882 Msa0101180:CDS 50.0%
ACTTTGTCTGGTGAGAGGCA+GGG + chr1_3:7715071-7715090 Msa0101180:intron 50.0%
AGCCAGTATGGATAAGTGCG+TGG - chr1_3:7716256-7716275 None:intergenic 50.0%
TTAGTACGGCGGTTCAGAAC+TGG + chr1_3:7716917-7716936 Msa0101180:CDS 50.0%
TAGTACGGCGGTTCAGAACT+GGG + chr1_3:7716918-7716937 Msa0101180:CDS 50.0%
CTCCGAAGTTACCACATCTG+TGG + chr1_3:7717402-7717421 Msa0101180:intron 50.0%
ATCGGTGACATCCACAGATG+TGG - chr1_3:7717416-7717435 None:intergenic 50.0%
GGGATGCCTCATATTTGCCA+AGG + chr1_3:7717477-7717496 Msa0101180:intron 50.0%
TTGCATTCCCTGGCGTTTAG+AGG + chr1_3:7717504-7717523 Msa0101180:intron 50.0%
ATGGGAACCTCTAAACGCCA+GGG - chr1_3:7717514-7717533 None:intergenic 50.0%
GGCTTTGCATGCCCTCATAA+TGG + chr1_3:7718658-7718677 Msa0101180:intron 50.0%
GCGACAAAGTTGTGACACGT+TGG - chr1_3:7718695-7718714 None:intergenic 50.0%
GGCAGTAAAGACGGGTGAAA+AGG - chr1_3:7718763-7718782 None:intergenic 50.0%
GCGAATAGTGGCAATGGTGA+TGG - chr1_3:7718886-7718905 None:intergenic 50.0%
CCACAAGCGAATAGTGGCAA+TGG - chr1_3:7718892-7718911 None:intergenic 50.0%
CCATTGCCACTATTCGCTTG+TGG + chr1_3:7718889-7718908 Msa0101180:intron 50.0%
CAAGCGAACCAGATGCATGT+CGG - chr1_3:7719610-7719629 None:intergenic 50.0%
! GGCGGCCTCAATTAGCATTT+TGG + chr1_3:7719759-7719778 Msa0101180:intron 50.0%
CACTGTGCCATATTCTTGGC+TGG + chr1_3:7719861-7719880 Msa0101180:intron 50.0%
TGCATCTTCGGGTGGATATG+AGG + chr1_3:7720154-7720173 Msa0101180:intron 50.0%
GCATCTTCGGGTGGATATGA+GGG + chr1_3:7720155-7720174 Msa0101180:intron 50.0%
!! GGTATGCTCGTTGGCTTGAT+TGG + chr1_3:7720806-7720825 Msa0101180:exon 50.0%
!! ACATCGACTTCGAAGCGAGG+AGG + chr1_3:7713513-7713532 Msa0101180:CDS 55.0%
GGATCTGGAGAGGAGGATTG+TGG + chr1_3:7714796-7714815 Msa0101180:CDS 55.0%
TTGTCGTTGGCCAAGAGCCA+AGG + chr1_3:7714833-7714852 Msa0101180:CDS 55.0%
TGTCGTTGGCCAAGAGCCAA+GGG + chr1_3:7714834-7714853 Msa0101180:CDS 55.0%
AGAGGGTCTTGGATGCCTAG+AGG + chr1_3:7714962-7714981 Msa0101180:CDS 55.0%
GACTTTGTCTGGTGAGAGGC+AGG + chr1_3:7715070-7715089 Msa0101180:intron 55.0%
GGCAGGGTAGGCTAAAGTAG+AGG + chr1_3:7715087-7715106 Msa0101180:intron 55.0%
! TTGACTAGTTCGCTGGTCGC+TGG + chr1_3:7716077-7716096 Msa0101180:intron 55.0%
! TGACTAGTTCGCTGGTCGCT+GGG + chr1_3:7716078-7716097 Msa0101180:intron 55.0%
CTGTCCACTCGCACAATCCA+AGG - chr1_3:7716484-7716503 None:intergenic 55.0%
CTTGGATTGTGCGAGTGGAC+AGG + chr1_3:7716482-7716501 Msa0101180:intron 55.0%
GGCCAGGATGGCGCATATAT+TGG + chr1_3:7717124-7717143 Msa0101180:CDS 55.0%
GATGGGAACCTCTAAACGCC+AGG - chr1_3:7717515-7717534 None:intergenic 55.0%
GATGGAGCCCGATGAAAGGA+TGG - chr1_3:7718868-7718887 None:intergenic 55.0%
!! TGGTGATGGAGCCCGATGAA+AGG - chr1_3:7718872-7718891 None:intergenic 55.0%
TGCCACTATTCGCTTGTGGC+CGG + chr1_3:7718893-7718912 Msa0101180:intron 55.0%
AACCGGCCACAAGCGAATAG+TGG - chr1_3:7718898-7718917 None:intergenic 55.0%
AGTAGCACTGTAGCAGGCGG+CGG + chr1_3:7713399-7713418 Msa0101180:five_prime_UTR 60.0%
GCGGCGGTAACAGAGAGTTG+AGG + chr1_3:7713415-7713434 Msa0101180:five_prime_UTR 60.0%
TCGACTTCGAAGCGAGGAGG+AGG + chr1_3:7713516-7713535 Msa0101180:CDS 60.0%
!! GTCGCTTGGCTTTACGTCGC+CGG + chr1_3:7713597-7713616 Msa0101180:CDS 60.0%
TGTCTGGTGAGAGGCAGGGT+AGG + chr1_3:7715075-7715094 Msa0101180:intron 60.0%
GCTCTTCTTGACCGTCGACG+TGG + chr1_3:7717103-7717122 Msa0101180:CDS 60.0%
!! CTTGGCTTTACGTCGCCGGC+AGG + chr1_3:7713601-7713620 Msa0101180:CDS 65.0%
TCTTGACCGTCGACGTGGCC+AGG + chr1_3:7717108-7717127 Msa0101180:CDS 65.0%
GACCGTCGACGTGGCCAGGA+TGG + chr1_3:7717112-7717131 Msa0101180:CDS 70.0%
CGCCATCCTGGCCACGTCGA+CGG - chr1_3:7717117-7717136 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 7713311 7721240 7713311 ID=Msa0101180;Name=Msa0101180
chr1_3 mRNA 7713311 7721240 7713311 ID=Msa0101180-mRNA-1;Parent=Msa0101180;Name=Msa0101180-mRNA-1;_AED=0.14;_eAED=0.14;_QI=184|1|1|1|0.81|0.83|12|416|344
chr1_3 exon 7713311 7713622 7713311 ID=Msa0101180-mRNA-1:exon:3043;Parent=Msa0101180-mRNA-1
chr1_3 exon 7713743 7713806 7713743 ID=Msa0101180-mRNA-1:exon:3044;Parent=Msa0101180-mRNA-1
chr1_3 exon 7714271 7714320 7714271 ID=Msa0101180-mRNA-1:exon:3045;Parent=Msa0101180-mRNA-1
chr1_3 exon 7714796 7714983 7714796 ID=Msa0101180-mRNA-1:exon:3046;Parent=Msa0101180-mRNA-1
chr1_3 exon 7716186 7716246 7716186 ID=Msa0101180-mRNA-1:exon:3047;Parent=Msa0101180-mRNA-1
chr1_3 exon 7716364 7716436 7716364 ID=Msa0101180-mRNA-1:exon:3048;Parent=Msa0101180-mRNA-1
chr1_3 exon 7716865 7716988 7716865 ID=Msa0101180-mRNA-1:exon:3049;Parent=Msa0101180-mRNA-1
chr1_3 exon 7717092 7717179 7717092 ID=Msa0101180-mRNA-1:exon:3050;Parent=Msa0101180-mRNA-1
chr1_3 exon 7717757 7717807 7717757 ID=Msa0101180-mRNA-1:exon:3051;Parent=Msa0101180-mRNA-1
chr1_3 exon 7719601 7719672 7719601 ID=Msa0101180-mRNA-1:exon:3052;Parent=Msa0101180-mRNA-1
chr1_3 exon 7720299 7720411 7720299 ID=Msa0101180-mRNA-1:exon:3053;Parent=Msa0101180-mRNA-1
chr1_3 exon 7720802 7721240 7720802 ID=Msa0101180-mRNA-1:exon:3054;Parent=Msa0101180-mRNA-1
chr1_3 five_prime_UTR 7713311 7713494 7713311 ID=Msa0101180-mRNA-1:five_prime_utr;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7713495 7713622 7713495 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7713743 7713806 7713743 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7714271 7714320 7714271 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7714796 7714983 7714796 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7716186 7716246 7716186 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7716364 7716436 7716364 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7716865 7716988 7716865 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7717092 7717179 7717092 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7717757 7717807 7717757 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7719601 7719672 7719601 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7720299 7720411 7720299 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 CDS 7720802 7720824 7720802 ID=Msa0101180-mRNA-1:cds;Parent=Msa0101180-mRNA-1
chr1_3 three_prime_UTR 7720825 7721240 7720825 ID=Msa0101180-mRNA-1:three_prime_utr;Parent=Msa0101180-mRNA-1
Gene Sequence

>Msa0101180

ATGGATACATTACCAACAACATCGACTTCGAAGCGAGGAGGAGGAAGATCAAAACTCGTTCAAACATCAAAACCTTCTCTCCTCTTAGCTTTCTTCTCTTGCGTCGCTTGGCTTTACGTCGCCGGCAGGTTATGGCAAGATGCAGAGAATCGGAATTTACTTGCTAGTCTTCTCAAAAAGAATTCAGCACAGAGGCCTAAGGTTCTTACAGTGGAAGATAAGTTAATGGTACTAGGGTGCAGGGATCTGGAGAGGAGGATTGTGGAAGCTGAGATGGAATTGTCGTTGGCCAAGAGCCAAGGGTACCTCAAAGGACAACGGCAGCAAACTGGTTCTTCTGACCGTAGGCTTCTTGCTGTTATTGGAGTATATACTGGATTTGGAAGCAAACTCAAAAGAAATGTATTCAGAGGGTCTTGGATGCCTAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTGATCATACGTTTTGTAATTGGTCGGAGTCCTAATCGAGGTGATAGCTTGGATCGCAATATTAATGAGGAAAACCGCTCAACAAAAGATTTCTTGATTCTTGAAAGTCACGAGGAAGCTCAAGAAGAGTTGCCTAAAAAAGCAAAAATCTTCTTTAGTACGGCGGTTCAGAACTGGGATGCTGATTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTCGAGGGTTTAATTGCTCTTCTTGACCGTCGACGTGGCCAGGATGGCGCATATATTGGATGCATGAAGTCAGGAGACGTGATATCGGAAGAGGGAAAGCTTTGGTATGAACCTGATTGGTGGAAATTTGGGGATGAAAAATCGTATTTCCGACATGCATCTGGTTCGCTTGTTATACTTTCGAAGAATTTGGCACAGTACATTAACATAAACAGTGTATCTTTGAAGACCTATGCCTATGATGATACAACATTGGGATCATGGATGATGGGCGTCCAATCAACATATATAGACGACAGTCGGCTTTGCTGCAGTAGCATCAGTAAAGATAAGGTATGCTCGTTGGCTTGA

Protein sequence

>Msa0101180

MDTLPTTSTSKRGGGRSKLVQTSKPSLLLAFFSCVAWLYVAGRLWQDAENRNLLASLLKKNSAQRPKVLTVEDKLMVLGCRDLERRIVEAEMELSLAKSQGYLKGQRQQTGSSDRRLLAVIGVYTGFGSKLKRNVFRGSWMPRGDALKKLEERGVIIRFVIGRSPNRGDSLDRNINEENRSTKDFLILESHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIALLDRRRGQDGAYIGCMKSGDVISEEGKLWYEPDWWKFGDEKSYFRHASGSLVILSKNLAQYININSVSLKTYAYDDTTLGSWMMGVQSTYIDDSRLCCSSISKDKVCSLA*