Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249680 | XP_003629262.1 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249680 | sp|Q8L7E9|MCAC1_ARATH | 64.569 | 429 | 137 | 6 | 1 | 423 | 1 | 420 | 0.0 | 558 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249680 | G7LB65 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 874 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0757950 | Msa1249680 | 0.803206 | 3.892958e-49 | -8.615850e-47 |
| Msa0810480 | Msa1249680 | 0.818201 | 2.218421e-52 | -8.615850e-47 |
| Msa0225320 | Msa1249680 | 0.812894 | 3.368843e-51 | -8.615850e-47 |
| Msa1249680 | Msa1269080 | 0.810533 | 1.099612e-50 | -8.615850e-47 |
| Msa1249680 | Msa1271290 | 0.805195 | 1.500691e-49 | -8.615850e-47 |
| Msa1249680 | Msa1365060 | 0.803500 | 3.383853e-49 | -8.615850e-47 |
| Msa1249680 | Msa1428310 | 0.812329 | 4.478888e-51 | -8.615850e-47 |
| Msa1249680 | Msa1431430 | 0.809195 | 2.133269e-50 | -8.615850e-47 |
| Msa1249680 | Msa1438250 | 0.806588 | 7.648179e-50 | -8.615850e-47 |
| Msa0387510 | Msa1249680 | 0.808070 | 3.709637e-50 | -8.615850e-47 |
| Msa0349080 | Msa1249680 | 0.808688 | 2.738646e-50 | -8.615850e-47 |
| Msa0491040 | Msa1249680 | 0.807051 | 6.105634e-50 | -8.615850e-47 |
| Msa0510980 | Msa1249680 | 0.806078 | 9.794108e-50 | -8.615850e-47 |
| Msa0557140 | Msa1249680 | 0.804411 | 2.188422e-49 | -8.615850e-47 |
| Msa0880140 | Msa1249680 | 0.801241 | 9.880332e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249680 | MtrunA17_Chr8g0371431 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 874 |
| Msa1249680 | MtrunA17_Chr5g0405841 | 76.303 | 422 | 93 | 3 | 3 | 424 | 2 | 416 | 0.0 | 663 |
| Msa1249680 | MtrunA17_Chr4g0045011 | 30.120 | 166 | 99 | 5 | 252 | 403 | 4 | 166 | 2.99e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249680 | AT4G35920.1 | 64.569 | 429 | 137 | 6 | 1 | 423 | 1 | 420 | 0.0 | 558 |
| Msa1249680 | AT4G35920.5 | 64.569 | 429 | 137 | 6 | 1 | 423 | 1 | 420 | 0.0 | 558 |
| Msa1249680 | AT4G35920.4 | 64.569 | 429 | 137 | 6 | 1 | 423 | 1 | 420 | 0.0 | 558 |
| Msa1249680 | AT4G35920.2 | 64.569 | 429 | 137 | 6 | 1 | 423 | 1 | 420 | 0.0 | 558 |
| Msa1249680 | AT4G35920.3 | 64.569 | 429 | 137 | 6 | 1 | 423 | 1 | 420 | 0.0 | 558 |
| Msa1249680 | AT2G17780.2 | 60.798 | 426 | 151 | 5 | 1 | 423 | 1 | 413 | 2.85e-177 | 501 |
| Msa1249680 | AT2G17780.7 | 60.981 | 428 | 149 | 6 | 1 | 423 | 1 | 415 | 6.72e-177 | 500 |
| Msa1249680 | AT2G17780.6 | 60.981 | 428 | 149 | 6 | 1 | 423 | 1 | 415 | 6.72e-177 | 500 |
| Msa1249680 | AT2G17780.10 | 60.981 | 428 | 149 | 6 | 1 | 423 | 1 | 415 | 6.72e-177 | 500 |
| Msa1249680 | AT2G17780.5 | 60.981 | 428 | 149 | 6 | 1 | 423 | 1 | 415 | 6.72e-177 | 500 |
| Msa1249680 | AT2G17780.1 | 60.981 | 428 | 149 | 6 | 1 | 423 | 1 | 415 | 6.72e-177 | 500 |
| Msa1249680 | AT2G17780.3 | 61.520 | 408 | 141 | 5 | 1 | 405 | 1 | 395 | 1.68e-171 | 486 |
| Msa1249680 | AT2G17780.9 | 61.520 | 408 | 141 | 5 | 1 | 405 | 1 | 395 | 1.68e-171 | 486 |
| Msa1249680 | AT2G17780.8 | 60.477 | 377 | 133 | 5 | 1 | 374 | 1 | 364 | 1.39e-152 | 437 |
| Msa1249680 | AT2G17780.4 | 58.621 | 319 | 116 | 5 | 1 | 316 | 1 | 306 | 9.30e-116 | 341 |
Find 99 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGAGGCTCTCGGGTTTC+AGG | 0.140533 | 8_2:+44602189 | None:intergenic |
| GAAAATTGGCTATTGATATT+TGG | 0.186549 | 8_2:-44599130 | Msa1249680:three_prime_UTR |
| CTGCATCTAAGCCTGTTAAT+TGG | 0.207077 | 8_2:+44602349 | None:intergenic |
| AAAGCATAGAGTGTCATTTA+AGG | 0.211626 | 8_2:+44603525 | None:intergenic |
| TTTGAGAAGGTCATATATTT+TGG | 0.228435 | 8_2:-44602151 | Msa1249680:CDS |
| GTGCAAATCCGCAGGGTTTA+TGG | 0.247188 | 8_2:-44599519 | Msa1249680:intron |
| GGAACATTGTTTATCAATTT+AGG | 0.249469 | 8_2:-44602080 | Msa1249680:CDS |
| ATTCACCGAAGCACTTAAAA+AGG | 0.252933 | 8_2:-44601227 | Msa1249680:CDS |
| GCATCTTCATGGGAACAATT+TGG | 0.278027 | 8_2:-44602390 | Msa1249680:CDS |
| CCATATCAAATATTGAAAAT+TGG | 0.288981 | 8_2:-44599144 | Msa1249680:three_prime_UTR |
| GTGTCCTCTTGGTCATGTTC+TGG | 0.294388 | 8_2:+44601295 | None:intergenic |
| GCAAATGTGGCCCAATTAAC+AGG | 0.308741 | 8_2:-44602360 | Msa1249680:CDS |
| ACGATAAAATCAAAGGATAA+TGG | 0.309686 | 8_2:+44599034 | None:intergenic |
| GCACAACATCTTAAGTTGAT+TGG | 0.319124 | 8_2:-44602255 | Msa1249680:CDS |
| ACATCATTCACAGGCAAATA+TGG | 0.323563 | 8_2:-44601179 | Msa1249680:CDS |
| AGCAAAATACATACAAAGAT+AGG | 0.328474 | 8_2:+44600398 | None:intergenic |
| GATTGTAATTTGATCGATTA+GGG | 0.337579 | 8_2:-44599175 | Msa1249680:three_prime_UTR |
| GATTTGATTCTCACACTGTT+TGG | 0.355518 | 8_2:-44599108 | Msa1249680:three_prime_UTR |
| CGATAAAATCAAAGGATAAT+GGG | 0.356198 | 8_2:+44599035 | None:intergenic |
| TGCATCTAAGCCTGTTAATT+GGG | 0.358164 | 8_2:+44602350 | None:intergenic |
| CACAACATCTTAAGTTGATT+GGG | 0.378407 | 8_2:-44602254 | Msa1249680:CDS |
| CTAGTTGTTCTAGAGGCTCT+CGG | 0.379192 | 8_2:+44602181 | None:intergenic |
| ATCAAAATTCATATTAATGA+AGG | 0.390399 | 8_2:+44603307 | None:intergenic |
| GCTTCGGTGAATGAAAAGTT+TGG | 0.393080 | 8_2:+44601238 | None:intergenic |
| CTACCTTTATTTGCTTGCCA+TGG | 0.394112 | 8_2:-44602106 | Msa1249680:CDS |
| TCTTCAGGTGATAACTTCTC+TGG | 0.407119 | 8_2:+44601091 | None:intergenic |
| ATCCCATGGCAAGCAAATAA+AGG | 0.407737 | 8_2:+44602103 | None:intergenic |
| GGGCTAGTGTTGATCTTCTC+AGG | 0.411172 | 8_2:+44599236 | None:intergenic |
| TTAGATGCAGTAAAGTTGAT+TGG | 0.414089 | 8_2:-44602336 | Msa1249680:CDS |
| ACAATCTGGTAGTTATCTTC+AGG | 0.415787 | 8_2:+44601076 | None:intergenic |
| GAGACTTGAAGTTATTGAAA+AGG | 0.417718 | 8_2:-44601377 | Msa1249680:CDS |
| AGATTGTAATTTGATCGATT+AGG | 0.418880 | 8_2:-44599176 | Msa1249680:three_prime_UTR |
| GATATAGCATGGCATCTTCA+TGG | 0.424441 | 8_2:-44602401 | Msa1249680:exon |
| TTGAAAACTCAAGATCTTGA+AGG | 0.429876 | 8_2:-44603123 | Msa1249680:five_prime_UTR |
| TACCTTTATTTGCTTGCCAT+GGG | 0.431724 | 8_2:-44602105 | Msa1249680:CDS |
| CTAGAGGCTCTCGGGTTTCA+GGG | 0.434211 | 8_2:+44602190 | None:intergenic |
| AGAATGACCTTTGCTGCCAT+TGG | 0.434613 | 8_2:+44601024 | None:intergenic |
| CCCTCCAACTGCACAGTACA+TGG | 0.435922 | 8_2:-44599216 | Msa1249680:CDS |
| ATATTGTTATGTGAGAAATA+AGG | 0.442364 | 8_2:+44603582 | None:intergenic |
| GTCATTTAAGGTAATGGCAT+TGG | 0.447105 | 8_2:+44603537 | None:intergenic |
| AGGAATGTAACAAAGCAAAA+AGG | 0.448382 | 8_2:+44603602 | None:intergenic |
| TAGGAAGATGATGAACATTC+CGG | 0.451122 | 8_2:-44599789 | Msa1249680:intron |
| GTTGCTATACTTGCTGCATA+AGG | 0.459740 | 8_2:-44599820 | Msa1249680:CDS |
| GCGATATTCTTTCATCATCA+AGG | 0.464449 | 8_2:-44600976 | Msa1249680:intron |
| TGTTACTGTATTCTACAATC+TGG | 0.466235 | 8_2:+44601062 | None:intergenic |
| GTTCATATCAGCAGGAAGAT+TGG | 0.467386 | 8_2:-44600452 | Msa1249680:CDS |
| TAGATGCAGTAAAGTTGATT+GGG | 0.468118 | 8_2:-44602335 | Msa1249680:CDS |
| TAGAGTGTCATTTAAGGTAA+TGG | 0.471073 | 8_2:+44603531 | None:intergenic |
| CTTGCGCTCTTGTACAAGAA+TGG | 0.471677 | 8_2:-44599548 | Msa1249680:CDS |
| TCAGCACTACAGTGTCCTCT+TGG | 0.474645 | 8_2:+44601284 | None:intergenic |
| GCTGCATAAGGAGGAAGCTT+AGG | 0.476922 | 8_2:-44599808 | Msa1249680:CDS |
| AACTAGAAGTTCATATCAGC+AGG | 0.477897 | 8_2:-44600460 | Msa1249680:CDS |
| AAGGACAATAAGTGTGTTGT+CGG | 0.483459 | 8_2:+44603368 | None:intergenic |
| AATCTTTGAAAATGTTCCAC+AGG | 0.488214 | 8_2:+44600267 | None:intergenic |
| TGACTTTATTGCATATTCGT+TGG | 0.495627 | 8_2:-44599855 | Msa1249680:CDS |
| TAGTTGTTCTAGAGGCTCTC+GGG | 0.496041 | 8_2:+44602182 | None:intergenic |
| TTTATTTGCTTGCCATGGGA+TGG | 0.498857 | 8_2:-44602101 | Msa1249680:CDS |
| CAAAGTTTCAGAAAAGAATC+CGG | 0.507843 | 8_2:-44600487 | Msa1249680:CDS |
| ATTGGATGACGAGGACCAAA+AGG | 0.511764 | 8_2:-44601338 | Msa1249680:CDS |
| TAAATTACATATTGGTCTGT+TGG | 0.513750 | 8_2:+44600231 | None:intergenic |
| GATTCCATGTACTGTGCAGT+TGG | 0.522079 | 8_2:+44599212 | None:intergenic |
| TCCATGTACTGTGCAGTTGG+AGG | 0.523348 | 8_2:+44599215 | None:intergenic |
| GGAGAGAAGTGCAAATCCGC+AGG | 0.526700 | 8_2:-44599527 | Msa1249680:CDS |
| ATATAGCATGGCATCTTCAT+GGG | 0.527850 | 8_2:-44602400 | Msa1249680:exon |
| TCGTAGTATACTATGAAATA+CGG | 0.528688 | 8_2:+44603625 | None:intergenic |
| TGAAAACTCAAGATCTTGAA+GGG | 0.530000 | 8_2:-44603122 | Msa1249680:five_prime_UTR |
| TCTGATGCCAATGGCAGCAA+AGG | 0.538606 | 8_2:-44601031 | Msa1249680:CDS |
| GCAAAATACATACAAAGATA+GGG | 0.538715 | 8_2:+44600399 | None:intergenic |
| ATTTGGAGAGATTGCAAATG+TGG | 0.539302 | 8_2:-44602373 | Msa1249680:CDS |
| ACTAGAGTTACATCATTCAC+AGG | 0.549013 | 8_2:-44601188 | Msa1249680:CDS |
| CACTGCACTGCAACAACACA+TGG | 0.551166 | 8_2:+44603155 | None:intergenic |
| TGAGAAGATCTACACCATGC+AGG | 0.551996 | 8_2:-44603080 | Msa1249680:five_prime_UTR |
| GCATCTTCTAGTTGTTCTAG+AGG | 0.556880 | 8_2:+44602174 | None:intergenic |
| GAGAAGATCTACACCATGCA+GGG | 0.560201 | 8_2:-44603079 | Msa1249680:five_prime_UTR |
| AATGTATACGATAAAATCAA+AGG | 0.561443 | 8_2:+44599027 | None:intergenic |
| AATGCTATTTGTACAACCAT+AGG | 0.565364 | 8_2:-44603031 | Msa1249680:intron |
| ATAAACAATGTTCCATCCCA+TGG | 0.566413 | 8_2:+44602089 | None:intergenic |
| CATTGTTTATCAATTTAGGA+AGG | 0.567874 | 8_2:-44602076 | Msa1249680:CDS |
| TATGGTTGTACAAATAGCAT+TGG | 0.575019 | 8_2:+44603033 | None:intergenic |
| CCATGTACTGTGCAGTTGGA+GGG | 0.578134 | 8_2:+44599216 | None:intergenic |
| CTTTAAAATCATCCCCTGCA+TGG | 0.580656 | 8_2:+44603066 | None:intergenic |
| GGATCAATGCGTGTACACAT+TGG | 0.581545 | 8_2:-44601356 | Msa1249680:CDS |
| TGCTCGTGCTACTCGAGTCA+AGG | 0.587833 | 8_2:-44601995 | Msa1249680:intron |
| TCGGTTAAGAAATTTATGCA+TGG | 0.589947 | 8_2:+44603387 | None:intergenic |
| GCTATACTTGCTGCATAAGG+AGG | 0.604551 | 8_2:-44599817 | Msa1249680:CDS |
| AACTAGAAGATGCTTTGAGA+AGG | 0.615176 | 8_2:-44602164 | Msa1249680:CDS |
| ATCTTTGAAAATGTTCCACA+GGG | 0.634487 | 8_2:+44600268 | None:intergenic |
| AACAGTCATTCTGATGCCAA+TGG | 0.635654 | 8_2:-44601040 | Msa1249680:CDS |
| CTTCTCTGGAAGAGAATAAG+CGG | 0.635966 | 8_2:+44601105 | None:intergenic |
| CGTGTACACATTGGATGACG+AGG | 0.639288 | 8_2:-44601347 | Msa1249680:CDS |
| TATGAACTTCTAGTTGACAC+CGG | 0.649307 | 8_2:+44600468 | None:intergenic |
| GAGAGAAGTGCAAATCCGCA+GGG | 0.656793 | 8_2:-44599526 | Msa1249680:CDS |
| TGAAAGCTGCAAATACAGCA+AGG | 0.659950 | 8_2:-44602305 | Msa1249680:CDS |
| GAAACCAGAACATGACCAAG+AGG | 0.660378 | 8_2:-44601299 | Msa1249680:CDS |
| AAGACATTCTTCTATCCCTG+TGG | 0.670537 | 8_2:-44600283 | Msa1249680:CDS |
| CTGTGTGAGCTGATATAGCA+TGG | 0.679336 | 8_2:-44602412 | Msa1249680:exon |
| TTGTCGACTAGAGTAATGAG+AGG | 0.690301 | 8_2:+44602018 | None:intergenic |
| AGAAGATCTACACCATGCAG+GGG | 0.700251 | 8_2:-44603078 | Msa1249680:five_prime_UTR |
| AAGTCATACCATAAACCCTG+CGG | 0.759385 | 8_2:+44599511 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTGATTTATTAATTTT+TGG | + | chr8_2:44599747-44599766 | None:intergenic | 10.0% |
| !! | TTGATTTAATTAGAAAAATT+AGG | + | chr8_2:44600193-44600212 | None:intergenic | 10.0% |
| !!! | TAATTTTTCTAATTAAATCA+AGG | - | chr8_2:44600192-44600211 | Msa1249680:intron | 10.0% |
| !! | CATGATAAATAATAAAATTA+TGG | + | chr8_2:44602046-44602065 | None:intergenic | 10.0% |
| !!! | AATGTTTGTTAAAATTTAAT+TGG | - | chr8_2:44602911-44602930 | Msa1249680:intron | 10.0% |
| !! | TTATATTATGATATAGTATA+TGG | - | chr8_2:44602969-44602988 | Msa1249680:intron | 10.0% |
| !! | ATAAGTAAAAGAAAAAGAAA+AGG | + | chr8_2:44599309-44599328 | None:intergenic | 15.0% |
| !! | ATCAAAATTCATATTAATGA+AGG | + | chr8_2:44599351-44599370 | None:intergenic | 15.0% |
| !!! | AAGAAAAAAATAACTTTTTG+AGG | + | chr8_2:44599883-44599902 | None:intergenic | 15.0% |
| !!! | GATTGAAAATATAATTTTGA+AGG | - | chr8_2:44600214-44600233 | Msa1249680:intron | 15.0% |
| !! | GATAAATAATAAAATTATGG+AGG | + | chr8_2:44602043-44602062 | None:intergenic | 15.0% |
| !! | AAAGATTGTAAATTACATAT+TGG | + | chr8_2:44602435-44602454 | None:intergenic | 15.0% |
| !! | TTAACAAATAATCAAAATTC+AGG | - | chr8_2:44602604-44602623 | Msa1249680:intron | 15.0% |
| !! | AGACATGTATAAAATAAATT+AGG | + | chr8_2:44603238-44603257 | None:intergenic | 15.0% |
| !!! | AATTTATTTTATACATGTCT+TGG | - | chr8_2:44603238-44603257 | Msa1249680:five_prime_UTR | 15.0% |
| !! | ATATTGTTATGTGAGAAATA+AGG | + | chr8_2:44599076-44599095 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCACTTCCTATTT+TGG | - | chr8_2:44599153-44599172 | Msa1249680:three_prime_UTR | 20.0% |
| !! | AATGATCATTTATTTACCTA+TGG | + | chr8_2:44599643-44599662 | None:intergenic | 20.0% |
| !! | TATAACTTCACAAATCAAAA+TGG | - | chr8_2:44599677-44599696 | Msa1249680:intron | 20.0% |
| !! | AAACATTATCCATAAATGAA+GGG | + | chr8_2:44599717-44599736 | None:intergenic | 20.0% |
| !! | ATTTCCAAAATATTTGTACT+GGG | + | chr8_2:44600142-44600161 | None:intergenic | 20.0% |
| !! | TATTTCCAAAATATTTGTAC+TGG | + | chr8_2:44600143-44600162 | None:intergenic | 20.0% |
| !!! | ATTTTGGAAATATAGAATCT+TGG | - | chr8_2:44600151-44600170 | Msa1249680:intron | 20.0% |
| !!! | GAAAATATAATTTTGAAGGT+TGG | - | chr8_2:44600218-44600237 | Msa1249680:intron | 20.0% |
| !!! | AATGCAGAACTTTTTTTTTT+CGG | - | chr8_2:44601149-44601168 | Msa1249680:CDS | 20.0% |
| !!! | AAAGAATATCGCTTTTTTTA+TGG | + | chr8_2:44601671-44601690 | None:intergenic | 20.0% |
| !!! | TTTAACACCGTTATATTTTT+AGG | - | chr8_2:44601909-44601928 | Msa1249680:intron | 20.0% |
| !!! | TTAACACCGTTATATTTTTA+GGG | - | chr8_2:44601910-44601929 | Msa1249680:intron | 20.0% |
| !!! | TTTTACCATTTTTACCATTT+CGG | - | chr8_2:44602088-44602107 | Msa1249680:CDS | 20.0% |
| !! | TAAATATTAATTTAAGCCCA+GGG | + | chr8_2:44602525-44602544 | None:intergenic | 20.0% |
| !! | ATAAATATTAATTTAAGCCC+AGG | + | chr8_2:44602526-44602545 | None:intergenic | 20.0% |
| !!! | GATTTAAGTTACAAATATTC+AGG | - | chr8_2:44602668-44602687 | Msa1249680:intron | 20.0% |
| !!! | GTTTTAGCTTTATAATATTC+CGG | - | chr8_2:44602937-44602956 | Msa1249680:intron | 20.0% |
| !!! | CCAATTTTCAATATTTGATA+TGG | + | chr8_2:44603514-44603533 | None:intergenic | 20.0% |
| !! | CCATATCAAATATTGAAAAT+TGG | - | chr8_2:44603511-44603530 | Msa1249680:five_prime_UTR | 20.0% |
| !! | TAAAAAGCTACATTACATAT+AGG | + | chr8_2:44603582-44603601 | None:intergenic | 20.0% |
| !!! | GTAGCTTTTTAATATATAGT+TGG | - | chr8_2:44603591-44603610 | Msa1249680:five_prime_UTR | 20.0% |
| !! | AATGTATACGATAAAATCAA+AGG | + | chr8_2:44603631-44603650 | None:intergenic | 20.0% |
| !!! | TTGATTTTATCGTATACATT+TGG | - | chr8_2:44603631-44603650 | Msa1249680:five_prime_UTR | 20.0% |
| ! | TCGTAGTATACTATGAAATA+CGG | + | chr8_2:44599033-44599052 | None:intergenic | 25.0% |
| ! | CAGCATAAAAATACCAAAAT+AGG | + | chr8_2:44599169-44599188 | None:intergenic | 25.0% |
| !!! | CACTTTTAAGATTCACTAAT+TGG | - | chr8_2:44599432-44599451 | Msa1249680:intron | 25.0% |
| ! | AAATTTCAACCCTTCATTTA+TGG | - | chr8_2:44599705-44599724 | Msa1249680:intron | 25.0% |
| ! | CAAACATTATCCATAAATGA+AGG | + | chr8_2:44599718-44599737 | None:intergenic | 25.0% |
| ! | TTTCCAAAATATTTGTACTG+GGG | + | chr8_2:44600141-44600160 | None:intergenic | 25.0% |
| !! | TTTGAGAAGGTCATATATTT+TGG | - | chr8_2:44600504-44600523 | Msa1249680:intron | 25.0% |
| ! | GGAACATTGTTTATCAATTT+AGG | - | chr8_2:44600575-44600594 | Msa1249680:intron | 25.0% |
| ! | CATTGTTTATCAATTTAGGA+AGG | - | chr8_2:44600579-44600598 | Msa1249680:intron | 25.0% |
| !!! | TCGAGCATATATTTTTTCAA+CGG | - | chr8_2:44600832-44600851 | Msa1249680:intron | 25.0% |
| ! | TAAGCAACAACATTTAAAAG+TGG | + | chr8_2:44600937-44600956 | None:intergenic | 25.0% |
| !!! | ATTTTCCTTTTTAAGTGCTT+CGG | + | chr8_2:44601436-44601455 | None:intergenic | 25.0% |
| ! | TCTCAAAAACACATAAAAGT+TGG | + | chr8_2:44601724-44601743 | None:intergenic | 25.0% |
| !! | AACGGTGTTAAAAATCTTAA+GGG | + | chr8_2:44601901-44601920 | None:intergenic | 25.0% |
| !! | TAACGGTGTTAAAAATCTTA+AGG | + | chr8_2:44601902-44601921 | None:intergenic | 25.0% |
| ! | GCAAAATACATACAAAGATA+GGG | + | chr8_2:44602259-44602278 | None:intergenic | 25.0% |
| ! | AGCAAAATACATACAAAGAT+AGG | + | chr8_2:44602260-44602279 | None:intergenic | 25.0% |
| !! | TAGTAGATATTTTCATTTGC+AGG | - | chr8_2:44602345-44602364 | Msa1249680:CDS | 25.0% |
| !! | TAAATTACATATTGGTCTGT+TGG | + | chr8_2:44602427-44602446 | None:intergenic | 25.0% |
| !! | ATTTTCAACAACTATAACAG+AGG | + | chr8_2:44602630-44602649 | None:intergenic | 25.0% |
| !!! | CACAACCTCAATATTTTTAA+GGG | + | chr8_2:44602728-44602747 | None:intergenic | 25.0% |
| !!! | TCACAACCTCAATATTTTTA+AGG | + | chr8_2:44602729-44602748 | None:intergenic | 25.0% |
| ! | ACAAACATTATACAAAAGCA+AGG | + | chr8_2:44602900-44602919 | None:intergenic | 25.0% |
| ! | CATAATATAACGAACATTAC+CGG | + | chr8_2:44602959-44602978 | None:intergenic | 25.0% |
| ! | AATCATTTACATTCTATGTC+AGG | - | chr8_2:44603042-44603061 | Msa1249680:five_prime_UTR | 25.0% |
| ! | ATCATTTACATTCTATGTCA+GGG | - | chr8_2:44603043-44603062 | Msa1249680:five_prime_UTR | 25.0% |
| ! | CTAGATCAAAATCAAAAGTT+TGG | + | chr8_2:44603285-44603304 | None:intergenic | 25.0% |
| ! | AGATTGTAATTTGATCGATT+AGG | - | chr8_2:44603479-44603498 | Msa1249680:five_prime_UTR | 25.0% |
| ! | GATTGTAATTTGATCGATTA+GGG | - | chr8_2:44603480-44603499 | Msa1249680:five_prime_UTR | 25.0% |
| ! | GAAAATTGGCTATTGATATT+TGG | - | chr8_2:44603525-44603544 | Msa1249680:five_prime_UTR | 25.0% |
| ! | CGATAAAATCAAAGGATAAT+GGG | + | chr8_2:44603623-44603642 | None:intergenic | 25.0% |
| ! | ACGATAAAATCAAAGGATAA+TGG | + | chr8_2:44603624-44603643 | None:intergenic | 25.0% |
| AGGAATGTAACAAAGCAAAA+AGG | + | chr8_2:44599056-44599075 | None:intergenic | 30.0% | |
| !! | TAGAGTGTCATTTAAGGTAA+TGG | + | chr8_2:44599127-44599146 | None:intergenic | 30.0% |
| !! | AAAGCATAGAGTGTCATTTA+AGG | + | chr8_2:44599133-44599152 | None:intergenic | 30.0% |
| TCGGTTAAGAAATTTATGCA+TGG | + | chr8_2:44599271-44599290 | None:intergenic | 30.0% | |
| TTGAAAACTCAAGATCTTGA+AGG | - | chr8_2:44599532-44599551 | Msa1249680:CDS | 30.0% | |
| TGAAAACTCAAGATCTTGAA+GGG | - | chr8_2:44599533-44599552 | Msa1249680:CDS | 30.0% | |
| TATGGTTGTACAAATAGCAT+TGG | + | chr8_2:44599625-44599644 | None:intergenic | 30.0% | |
| ! | AATGCTATTTGTACAACCAT+AGG | - | chr8_2:44599624-44599643 | Msa1249680:intron | 30.0% |
| CATGAGTGTTATATAAGTGT+CGG | + | chr8_2:44599932-44599951 | None:intergenic | 30.0% | |
| !!! | TTAGCTTTTTCGATAGTAGA+TGG | - | chr8_2:44600082-44600101 | Msa1249680:intron | 30.0% |
| !!! | TAGCTTTTTCGATAGTAGAT+GGG | - | chr8_2:44600083-44600102 | Msa1249680:intron | 30.0% |
| ! | TTAGATGCAGTAAAGTTGAT+TGG | - | chr8_2:44600319-44600338 | Msa1249680:intron | 30.0% |
| ! | TAGATGCAGTAAAGTTGATT+GGG | - | chr8_2:44600320-44600339 | Msa1249680:intron | 30.0% |
| !! | CACAACATCTTAAGTTGATT+GGG | - | chr8_2:44600401-44600420 | Msa1249680:intron | 30.0% |
| !!! | TATTTTGGTCAATAGTTGTC+AGG | - | chr8_2:44600519-44600538 | Msa1249680:intron | 30.0% |
| CATACATCAATTGAAACCAA+CGG | + | chr8_2:44600737-44600756 | None:intergenic | 30.0% | |
| CAATTGATGTATGTCTAATG+TGG | - | chr8_2:44600744-44600763 | Msa1249680:intron | 30.0% | |
| GCTCGATACAATTTACAATT+TGG | + | chr8_2:44600818-44600837 | None:intergenic | 30.0% | |
| TATTATTGGTCAATGACATG+AGG | + | chr8_2:44600864-44600883 | None:intergenic | 30.0% | |
| TGACAAGGAACTAGTATTAT+TGG | + | chr8_2:44600878-44600897 | None:intergenic | 30.0% | |
| TCAATAGCAAGTAAATGACA+AGG | + | chr8_2:44600893-44600912 | None:intergenic | 30.0% | |
| !! | TTCTTGATATTTTGAGTGTC+AGG | + | chr8_2:44601098-44601117 | None:intergenic | 30.0% |
| GACACTCAAAATATCAAGAA+CGG | - | chr8_2:44601098-44601117 | Msa1249680:CDS | 30.0% | |
| !! | ATAACATTAGCTTGCTTCTT+TGG | - | chr8_2:44601244-44601263 | Msa1249680:CDS | 30.0% |
| GAGACTTGAAGTTATTGAAA+AGG | - | chr8_2:44601278-44601297 | Msa1249680:CDS | 30.0% | |
| TGTTACTGTATTCTACAATC+TGG | + | chr8_2:44601596-44601615 | None:intergenic | 30.0% | |
| !!! | ATGTGTTTTTGAGATCACTT+AGG | - | chr8_2:44601730-44601749 | Msa1249680:intron | 30.0% |
| ACATAACTACTGTATCATTG+TGG | + | chr8_2:44601768-44601787 | None:intergenic | 30.0% | |
| ! | ATTAATTTTCTAATTGCGCG+AGG | + | chr8_2:44601838-44601857 | None:intergenic | 30.0% |
| GCAATTAGAAAATTAATCCC+TGG | - | chr8_2:44601841-44601860 | Msa1249680:intron | 30.0% | |
| GTGTTAAAAATCTTAAGGGA+GGG | + | chr8_2:44601897-44601916 | None:intergenic | 30.0% | |
| ATCGAGCCCTAAAAATATAA+CGG | + | chr8_2:44601919-44601938 | None:intergenic | 30.0% | |
| AATAAAATTATGGAGGAAGC+AGG | + | chr8_2:44602036-44602055 | None:intergenic | 30.0% | |
| AGTAACCGAAATGGTAAAAA+TGG | + | chr8_2:44602096-44602115 | None:intergenic | 30.0% | |
| CAAAGTTTCAGAAAAGAATC+CGG | - | chr8_2:44602168-44602187 | Msa1249680:CDS | 30.0% | |
| ! | ATCTTTGAAAATGTTCCACA+GGG | + | chr8_2:44602390-44602409 | None:intergenic | 30.0% |
| ! | AATCTTTGAAAATGTTCCAC+AGG | + | chr8_2:44602391-44602410 | None:intergenic | 30.0% |
| TGATATAGTGAACACTGAAA+TGG | - | chr8_2:44602461-44602480 | Msa1249680:intron | 30.0% | |
| GATATAGTGAACACTGAAAT+GGG | - | chr8_2:44602462-44602481 | Msa1249680:intron | 30.0% | |
| ATATAGTGAACACTGAAATG+GGG | - | chr8_2:44602463-44602482 | Msa1249680:intron | 30.0% | |
| CCAGATAGAATGAATAATAG+AGG | + | chr8_2:44602694-44602713 | None:intergenic | 30.0% | |
| CCTCTATTATTCATTCTATC+TGG | - | chr8_2:44602691-44602710 | Msa1249680:intron | 30.0% | |
| TGCTACCCTTAAAAATATTG+AGG | - | chr8_2:44602720-44602739 | Msa1249680:intron | 30.0% | |
| TGACTTTATTGCATATTCGT+TGG | - | chr8_2:44602800-44602819 | Msa1249680:intron | 30.0% | |
| ATGATATAGTATATGGAGCT+AGG | - | chr8_2:44602976-44602995 | Msa1249680:intron | 30.0% | |
| TGATATAGTATATGGAGCTA+GGG | - | chr8_2:44602977-44602996 | Msa1249680:intron | 30.0% | |
| ! | GTCATTTAAGGTAATGGCAT+TGG | + | chr8_2:44599121-44599140 | None:intergenic | 35.0% |
| AAGGACAATAAGTGTGTTGT+CGG | + | chr8_2:44599290-44599309 | None:intergenic | 35.0% | |
| ! | TACAAGTGTCATAGAAGTGT+CGG | + | chr8_2:44599827-44599846 | None:intergenic | 35.0% |
| TTCTTTACTTCGACACTTCT+TGG | - | chr8_2:44599898-44599917 | Msa1249680:intron | 35.0% | |
| !! | GTTATATAAGTGTCGGACAA+CGG | + | chr8_2:44599925-44599944 | None:intergenic | 35.0% |
| CTTGATCAACCTTGAATCTA+CGG | + | chr8_2:44600012-44600031 | None:intergenic | 35.0% | |
| TCAAGAAATGTTGCTCAACA+AGG | - | chr8_2:44600027-44600046 | Msa1249680:intron | 35.0% | |
| CAAGAAATGTTGCTCAACAA+GGG | - | chr8_2:44600028-44600047 | Msa1249680:intron | 35.0% | |
| AAGAAATGTTGCTCAACAAG+GGG | - | chr8_2:44600029-44600048 | Msa1249680:intron | 35.0% | |
| TCGATAGTAGATGGGTAAAT+TGG | - | chr8_2:44600091-44600110 | Msa1249680:intron | 35.0% | |
| ! | TGTCCCCAGTACAAATATTT+TGG | - | chr8_2:44600135-44600154 | Msa1249680:intron | 35.0% |
| ATATAGCATGGCATCTTCAT+GGG | - | chr8_2:44600255-44600274 | Msa1249680:CDS | 35.0% | |
| ATTTGGAGAGATTGCAAATG+TGG | - | chr8_2:44600282-44600301 | Msa1249680:CDS | 35.0% | |
| TGCATCTAAGCCTGTTAATT+GGG | + | chr8_2:44600308-44600327 | None:intergenic | 35.0% | |
| !! | GCACAACATCTTAAGTTGAT+TGG | - | chr8_2:44600400-44600419 | Msa1249680:intron | 35.0% |
| !! | AACTAGAAGATGCTTTGAGA+AGG | - | chr8_2:44600491-44600510 | Msa1249680:CDS | 35.0% |
| ! | TACCTTTATTTGCTTGCCAT+GGG | - | chr8_2:44600550-44600569 | Msa1249680:intron | 35.0% |
| ATAAACAATGTTCCATCCCA+TGG | + | chr8_2:44600569-44600588 | None:intergenic | 35.0% | |
| TTAAACTATCAACTGACCGT+TGG | - | chr8_2:44600718-44600737 | Msa1249680:intron | 35.0% | |
| !! | CTTGCTTCTTTGGAATATTC+AGG | - | chr8_2:44601254-44601273 | Msa1249680:CDS | 35.0% |
| ! | ATTCACCGAAGCACTTAAAA+AGG | - | chr8_2:44601428-44601447 | Msa1249680:intron | 35.0% |
| ACTAGAGTTACATCATTCAC+AGG | - | chr8_2:44601467-44601486 | Msa1249680:intron | 35.0% | |
| ACATCATTCACAGGCAAATA+TGG | - | chr8_2:44601476-44601495 | Msa1249680:intron | 35.0% | |
| ACAATCTGGTAGTTATCTTC+AGG | + | chr8_2:44601582-44601601 | None:intergenic | 35.0% | |
| GCGATATTCTTTCATCATCA+AGG | - | chr8_2:44601679-44601698 | Msa1249680:intron | 35.0% | |
| CACATAAAAGTTGGAGAAGA+GGG | + | chr8_2:44601715-44601734 | None:intergenic | 35.0% | |
| ACACATAAAAGTTGGAGAAG+AGG | + | chr8_2:44601716-44601735 | None:intergenic | 35.0% | |
| GGTGTTAAAAATCTTAAGGG+AGG | + | chr8_2:44601898-44601917 | None:intergenic | 35.0% | |
| AGTGTTTGGATGAGATGATT+CGG | + | chr8_2:44601977-44601996 | None:intergenic | 35.0% | |
| TCATCTCATCCAAACACTAT+TGG | - | chr8_2:44601979-44601998 | Msa1249680:intron | 35.0% | |
| CATCTCATCCAAACACTATT+GGG | - | chr8_2:44601980-44601999 | Msa1249680:intron | 35.0% | |
| !! | AGTATTGACCCAATAGTGTT+TGG | + | chr8_2:44601991-44602010 | None:intergenic | 35.0% |
| ACGAAAGTTAGTAACCGAAA+TGG | + | chr8_2:44602105-44602124 | None:intergenic | 35.0% | |
| !!! | CGGATTCTTTTCTGAAACTT+TGG | + | chr8_2:44602170-44602189 | None:intergenic | 35.0% |
| ! | TATGAACTTCTAGTTGACAC+CGG | + | chr8_2:44602190-44602209 | None:intergenic | 35.0% |
| AACTAGAAGTTCATATCAGC+AGG | - | chr8_2:44602195-44602214 | Msa1249680:CDS | 35.0% | |
| TATAGTGAACACTGAAATGG+GGG | - | chr8_2:44602464-44602483 | Msa1249680:intron | 35.0% | |
| ATAGCATAATATTTGTGCCC+TGG | - | chr8_2:44602505-44602524 | Msa1249680:intron | 35.0% | |
| TAGCATAATATTTGTGCCCT+GGG | - | chr8_2:44602506-44602525 | Msa1249680:intron | 35.0% | |
| TAGGAAGATGATGAACATTC+CGG | - | chr8_2:44602866-44602885 | Msa1249680:intron | 35.0% | |
| ATTTACATTCTATGTCAGGG+AGG | - | chr8_2:44603046-44603065 | Msa1249680:five_prime_UTR | 35.0% | |
| !!! | CGCATCTTTTTCAACATTTG+AGG | - | chr8_2:44603172-44603191 | Msa1249680:five_prime_UTR | 35.0% |
| GATTTGATTCTCACACTGTT+TGG | - | chr8_2:44603547-44603566 | Msa1249680:five_prime_UTR | 35.0% | |
| !! | CTTTAAAATCATCCCCTGCA+TGG | + | chr8_2:44599592-44599611 | None:intergenic | 40.0% |
| ! | CATGCAGGGGATGATTTTAA+AGG | - | chr8_2:44599590-44599609 | Msa1249680:CDS | 40.0% |
| TTATGAAGCACGACACCTTT+AGG | - | chr8_2:44599782-44599801 | Msa1249680:intron | 40.0% | |
| GACACTTCTATGACACTTGT+AGG | - | chr8_2:44599826-44599845 | Msa1249680:CDS | 40.0% | |
| GATATAGCATGGCATCTTCA+TGG | - | chr8_2:44600254-44600273 | Msa1249680:CDS | 40.0% | |
| GCATCTTCATGGGAACAATT+TGG | - | chr8_2:44600265-44600284 | Msa1249680:CDS | 40.0% | |
| CTGCATCTAAGCCTGTTAAT+TGG | + | chr8_2:44600309-44600328 | None:intergenic | 40.0% | |
| TGAAAGCTGCAAATACAGCA+AGG | - | chr8_2:44600350-44600369 | Msa1249680:intron | 40.0% | |
| ! | GCATCTTCTAGTTGTTCTAG+AGG | + | chr8_2:44600484-44600503 | None:intergenic | 40.0% |
| ! | CTACCTTTATTTGCTTGCCA+TGG | - | chr8_2:44600549-44600568 | Msa1249680:intron | 40.0% |
| ATCCCATGGCAAGCAAATAA+AGG | + | chr8_2:44600555-44600574 | None:intergenic | 40.0% | |
| TTTATTTGCTTGCCATGGGA+TGG | - | chr8_2:44600554-44600573 | Msa1249680:intron | 40.0% | |
| ! | TTGTCGACTAGAGTAATGAG+AGG | + | chr8_2:44600640-44600659 | None:intergenic | 40.0% |
| TGCTATTGATCATTCGTGCA+AGG | - | chr8_2:44600904-44600923 | Msa1249680:intron | 40.0% | |
| CTTTGCAAGATTCCTTGCTT+TGG | - | chr8_2:44601039-44601058 | Msa1249680:CDS | 40.0% | |
| CTTACATATTCGCCAAAGCA+AGG | + | chr8_2:44601054-44601073 | None:intergenic | 40.0% | |
| AAGAACGGCTCTGTATATGA+TGG | - | chr8_2:44601113-44601132 | Msa1249680:CDS | 40.0% | |
| ! | GAAAAACAGTCTGCACCTTT+TGG | + | chr8_2:44601335-44601354 | None:intergenic | 40.0% |
| GCTTCGGTGAATGAAAAGTT+TGG | + | chr8_2:44601420-44601439 | None:intergenic | 40.0% | |
| ! | CTTCTCTGGAAGAGAATAAG+CGG | + | chr8_2:44601553-44601572 | None:intergenic | 40.0% |
| TCTTCAGGTGATAACTTCTC+TGG | + | chr8_2:44601567-44601586 | None:intergenic | 40.0% | |
| AACAGTCATTCTGATGCCAA+TGG | - | chr8_2:44601615-44601634 | Msa1249680:intron | 40.0% | |
| TCGATTCCAATCCATGACAT+CGG | - | chr8_2:44601934-44601953 | Msa1249680:intron | 40.0% | |
| TTTCATCCGATGTCATGGAT+TGG | + | chr8_2:44601943-44601962 | None:intergenic | 40.0% | |
| GTTCATATCAGCAGGAAGAT+TGG | - | chr8_2:44602203-44602222 | Msa1249680:CDS | 40.0% | |
| AAGACATTCTTCTATCCCTG+TGG | - | chr8_2:44602372-44602391 | Msa1249680:CDS | 40.0% | |
| ATAGTGAACACTGAAATGGG+GGG | - | chr8_2:44602465-44602484 | Msa1249680:intron | 40.0% | |
| ! | GTTGCTATACTTGCTGCATA+AGG | - | chr8_2:44602835-44602854 | Msa1249680:intron | 40.0% |
| ATACGAGAAGTTGCTAAAGC+AGG | + | chr8_2:44603006-44603025 | None:intergenic | 40.0% | |
| AAGTCATACCATAAACCCTG+CGG | + | chr8_2:44603147-44603166 | None:intergenic | 40.0% | |
| GGACTTATCTATCCTCTTCT+TGG | - | chr8_2:44603259-44603278 | Msa1249680:five_prime_UTR | 40.0% | |
| TCAAAAGTTTGGCCAAGAAG+AGG | + | chr8_2:44603274-44603293 | None:intergenic | 40.0% | |
| TGAGAAGATCTACACCATGC+AGG | - | chr8_2:44599575-44599594 | Msa1249680:CDS | 45.0% | |
| GAGAAGATCTACACCATGCA+GGG | - | chr8_2:44599576-44599595 | Msa1249680:CDS | 45.0% | |
| AGAAGATCTACACCATGCAG+GGG | - | chr8_2:44599577-44599596 | Msa1249680:CDS | 45.0% | |
| AACACTCATGCGAGATGTGT+CGG | - | chr8_2:44599942-44599961 | Msa1249680:intron | 45.0% | |
| TTCCACACACCGTAGATTCA+AGG | - | chr8_2:44600000-44600019 | Msa1249680:intron | 45.0% | |
| AACCTTGAATCTACGGTGTG+TGG | + | chr8_2:44600005-44600024 | None:intergenic | 45.0% | |
| CTGTGTGAGCTGATATAGCA+TGG | - | chr8_2:44600243-44600262 | Msa1249680:CDS | 45.0% | |
| GCAAATGTGGCCCAATTAAC+AGG | - | chr8_2:44600295-44600314 | Msa1249680:intron | 45.0% | |
| !! | TAGTTGTTCTAGAGGCTCTC+GGG | + | chr8_2:44600476-44600495 | None:intergenic | 45.0% |
| !! | CTAGTTGTTCTAGAGGCTCT+CGG | + | chr8_2:44600477-44600496 | None:intergenic | 45.0% |
| AACGGCTCTGTATATGATGG+TGG | - | chr8_2:44601116-44601135 | Msa1249680:CDS | 45.0% | |
| GGATCAATGCGTGTACACAT+TGG | - | chr8_2:44601299-44601318 | Msa1249680:CDS | 45.0% | |
| ATTGGATGACGAGGACCAAA+AGG | - | chr8_2:44601317-44601336 | Msa1249680:CDS | 45.0% | |
| GAAACCAGAACATGACCAAG+AGG | - | chr8_2:44601356-44601375 | Msa1249680:CDS | 45.0% | |
| AGAATGACCTTTGCTGCCAT+TGG | + | chr8_2:44601634-44601653 | None:intergenic | 45.0% | |
| AGAAAATTAATCCCTGGCGC+CGG | - | chr8_2:44601847-44601866 | Msa1249680:intron | 45.0% | |
| ! | GAGGGATGTGTTGCCTATTT+TGG | + | chr8_2:44601879-44601898 | None:intergenic | 45.0% |
| TCCATGACATCGGATGAAAC+TGG | - | chr8_2:44601944-44601963 | Msa1249680:intron | 45.0% | |
| TCCAGTTTCATCCGATGTCA+TGG | + | chr8_2:44601948-44601967 | None:intergenic | 45.0% | |
| AATTATGGAGGAAGCAGGAG+AGG | + | chr8_2:44602031-44602050 | None:intergenic | 45.0% | |
| ! | GCTATACTTGCTGCATAAGG+AGG | - | chr8_2:44602838-44602857 | Msa1249680:intron | 45.0% |
| CAAAAGCAAGGCAGCATTAC+CGG | + | chr8_2:44602888-44602907 | None:intergenic | 45.0% | |
| CTTGCGCTCTTGTACAAGAA+TGG | - | chr8_2:44603107-44603126 | Msa1249680:five_prime_UTR | 45.0% | |
| GATTCCATGTACTGTGCAGT+TGG | + | chr8_2:44603446-44603465 | None:intergenic | 45.0% | |
| CACTGCACTGCAACAACACA+TGG | + | chr8_2:44599503-44599522 | None:intergenic | 50.0% | |
| !! | AGCACGACACCTTTAGGACT+AGG | - | chr8_2:44599788-44599807 | Msa1249680:intron | 50.0% |
| !! | CTTTAGGACTAGGTGTGTCG+CGG | - | chr8_2:44599798-44599817 | Msa1249680:CDS | 50.0% |
| ACTTGTAGGACACGTGTCGT+CGG | - | chr8_2:44599840-44599859 | Msa1249680:CDS | 50.0% | |
| CGTGTACACATTGGATGACG+AGG | - | chr8_2:44601308-44601327 | Msa1249680:CDS | 50.0% | |
| GTGTCCTCTTGGTCATGTTC+TGG | + | chr8_2:44601363-44601382 | None:intergenic | 50.0% | |
| TCAGCACTACAGTGTCCTCT+TGG | + | chr8_2:44601374-44601393 | None:intergenic | 50.0% | |
| TCTGATGCCAATGGCAGCAA+AGG | - | chr8_2:44601624-44601643 | Msa1249680:intron | 50.0% | |
| GAAAATTAATCCCTGGCGCC+GGG | - | chr8_2:44601848-44601867 | Msa1249680:intron | 50.0% | |
| !!! | TTGCCTATTTTGGCTCTGCC+CGG | + | chr8_2:44601869-44601888 | None:intergenic | 50.0% |
| GCTGCATAAGGAGGAAGCTT+AGG | - | chr8_2:44602847-44602866 | Msa1249680:intron | 50.0% | |
| ! | GAGAGAAGTGCAAATCCGCA+GGG | - | chr8_2:44603129-44603148 | Msa1249680:five_prime_UTR | 50.0% |
| GTGCAAATCCGCAGGGTTTA+TGG | - | chr8_2:44603136-44603155 | Msa1249680:five_prime_UTR | 50.0% | |
| !! | GGGCTAGTGTTGATCTTCTC+AGG | + | chr8_2:44603422-44603441 | None:intergenic | 50.0% |
| CCATGTACTGTGCAGTTGGA+GGG | + | chr8_2:44603442-44603461 | None:intergenic | 50.0% | |
| TCCATGTACTGTGCAGTTGG+AGG | + | chr8_2:44603443-44603462 | None:intergenic | 50.0% | |
| CGCGACACACCTAGTCCTAA+AGG | + | chr8_2:44599800-44599819 | None:intergenic | 55.0% | |
| CTAGAGGCTCTCGGGTTTCA+GGG | + | chr8_2:44600468-44600487 | None:intergenic | 55.0% | |
| TCTAGAGGCTCTCGGGTTTC+AGG | + | chr8_2:44600469-44600488 | None:intergenic | 55.0% | |
| ! | TGCTCGTGCTACTCGAGTCA+AGG | - | chr8_2:44600660-44600679 | Msa1249680:intron | 55.0% |
| ! | GGAGAGAAGTGCAAATCCGC+AGG | - | chr8_2:44603128-44603147 | Msa1249680:five_prime_UTR | 55.0% |
| CCCTCCAACTGCACAGTACA+TGG | - | chr8_2:44603439-44603458 | Msa1249680:five_prime_UTR | 55.0% | |
| GCGCCGGGCAGAGCCAAAAT+AGG | - | chr8_2:44601863-44601882 | Msa1249680:intron | 65.0% | |
| !! | TTTGGCTCTGCCCGGCGCCA+GGG | + | chr8_2:44601861-44601880 | None:intergenic | 70.0% |
| !!! | TTTTGGCTCTGCCCGGCGCC+AGG | + | chr8_2:44601862-44601881 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 44599021 | 44603656 | 44599021 | ID=Msa1249680;Name=Msa1249680 |
| chr8_2 | mRNA | 44599021 | 44603656 | 44599021 | ID=Msa1249680-mRNA-1;Parent=Msa1249680;Name=Msa1249680-mRNA-1;_AED=0.14;_eAED=0.14;_QI=651|1|1|1|0.85|0.75|8|187|424 |
| chr8_2 | exon | 44599021 | 44599263 | 44599021 | ID=Msa1249680-mRNA-1:exon:13543;Parent=Msa1249680-mRNA-1 |
| chr8_2 | exon | 44599520 | 44599613 | 44599520 | ID=Msa1249680-mRNA-1:exon:13542;Parent=Msa1249680-mRNA-1 |
| chr8_2 | exon | 44599790 | 44599896 | 44599790 | ID=Msa1249680-mRNA-1:exon:13541;Parent=Msa1249680-mRNA-1 |
| chr8_2 | exon | 44600239 | 44600310 | 44600239 | ID=Msa1249680-mRNA-1:exon:13540;Parent=Msa1249680-mRNA-1 |
| chr8_2 | exon | 44600412 | 44600512 | 44600412 | ID=Msa1249680-mRNA-1:exon:13539;Parent=Msa1249680-mRNA-1 |
| chr8_2 | exon | 44600977 | 44601401 | 44600977 | ID=Msa1249680-mRNA-1:exon:13538;Parent=Msa1249680-mRNA-1 |
| chr8_2 | exon | 44601996 | 44602441 | 44601996 | ID=Msa1249680-mRNA-1:exon:13537;Parent=Msa1249680-mRNA-1 |
| chr8_2 | exon | 44603032 | 44603656 | 44603032 | ID=Msa1249680-mRNA-1:exon:13536;Parent=Msa1249680-mRNA-1 |
| chr8_2 | five_prime_UTR | 44603032 | 44603656 | 44603032 | ID=Msa1249680-mRNA-1:five_prime_utr;Parent=Msa1249680-mRNA-1 |
| chr8_2 | five_prime_UTR | 44602416 | 44602441 | 44602416 | ID=Msa1249680-mRNA-1:five_prime_utr;Parent=Msa1249680-mRNA-1 |
| chr8_2 | CDS | 44601996 | 44602415 | 44601996 | ID=Msa1249680-mRNA-1:cds;Parent=Msa1249680-mRNA-1 |
| chr8_2 | CDS | 44600977 | 44601401 | 44600977 | ID=Msa1249680-mRNA-1:cds;Parent=Msa1249680-mRNA-1 |
| chr8_2 | CDS | 44600412 | 44600512 | 44600412 | ID=Msa1249680-mRNA-1:cds;Parent=Msa1249680-mRNA-1 |
| chr8_2 | CDS | 44600239 | 44600310 | 44600239 | ID=Msa1249680-mRNA-1:cds;Parent=Msa1249680-mRNA-1 |
| chr8_2 | CDS | 44599790 | 44599896 | 44599790 | ID=Msa1249680-mRNA-1:cds;Parent=Msa1249680-mRNA-1 |
| chr8_2 | CDS | 44599520 | 44599613 | 44599520 | ID=Msa1249680-mRNA-1:cds;Parent=Msa1249680-mRNA-1 |
| chr8_2 | CDS | 44599208 | 44599263 | 44599208 | ID=Msa1249680-mRNA-1:cds;Parent=Msa1249680-mRNA-1 |
| chr8_2 | three_prime_UTR | 44599021 | 44599207 | 44599021 | ID=Msa1249680-mRNA-1:three_prime_utr;Parent=Msa1249680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
