AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387510 MtrunA17_Chr3g0117271 95.503 467 19 1 1 467 32 496 0.0 911
Msa0387510 MtrunA17_Chr4g0058771 72.860 479 109 8 6 467 7 481 0.0 699
Msa0387510 MtrunA17_Chr5g0413131 63.203 462 154 8 8 467 16 463 0.0 587
Msa0387510 MtrunA17_Chr8g0368161 68.992 387 117 3 83 467 63 448 0.0 573
Msa0387510 MtrunA17_Chr2g0314461 58.398 387 151 8 83 467 28 406 1.97e-162 464
Msa0387510 MtrunA17_Chr8g0368241 54.306 418 180 6 52 467 6 414 2.07e-161 462
Msa0387510 MtrunA17_Chr7g0274951 57.289 391 143 7 100 466 49 439 1.05e-158 456
Msa0387510 MtrunA17_Chr1g0189961 55.860 401 144 8 100 467 51 451 6.57e-156 450
Msa0387510 MtrunA17_Chr8g0380511 56.021 382 149 7 103 466 35 415 6.88e-156 448
Msa0387510 MtrunA17_Chr2g0314471 56.010 391 163 8 79 467 23 406 1.95e-155 447
Msa0387510 MtrunA17_Chr2g0314451 54.872 390 169 5 79 467 22 405 1.55e-153 442
Msa0387510 MtrunA17_Chr2g0309251 55.670 388 151 7 100 467 40 426 6.34e-153 441
Msa0387510 MtrunA17_Chr8g0368201 54.633 313 125 3 171 467 9 320 1.49e-122 360
Msa0387510 MtrunA17_Chr8g0368291 46.411 418 197 12 58 467 7 405 1.46e-121 360
Msa0387510 MtrunA17_Chr8g0368341 50.862 348 153 8 122 467 4 335 1.10e-117 348
Msa0387510 MtrunA17_Chr3g0129891 41.778 450 171 12 23 466 15 379 4.44e-109 328
Msa0387510 MtrunA17_Chr2g0326371 50.301 332 141 11 147 467 42 360 3.23e-101 307
Msa0387510 MtrunA17_Chr8g0368221 59.514 247 94 3 97 343 18 258 4.90e-101 303
Msa0387510 MtrunA17_Chr8g0368181 64.062 192 69 0 276 467 2 193 1.26e-89 271
Msa0387510 MtrunA17_Chr3g0135381 41.192 386 196 9 104 462 51 432 2.76e-88 277
Msa0387510 MtrunA17_Chr6g0453411 40.323 372 193 9 121 467 8 375 3.02e-86 269
Msa0387510 MtrunA17_Chr3g0135371 38.718 390 208 9 104 467 51 435 1.60e-85 269
Msa0387510 MtrunA17_Chr3g0135401 39.252 321 167 7 167 463 30 346 1.04e-69 225
Msa0387510 MtrunA17_Chr8g0368351 50.000 224 94 5 56 277 41 248 5.49e-68 218
Msa0387510 MtrunA17_Chr8g0368361 50.769 195 92 3 276 467 2 195 2.02e-67 214
Msa0387510 MtrunA17_Chr8g0368331 39.711 277 134 5 221 467 13 286 2.58e-67 217
Msa0387510 MtrunA17_Chr1g0151871 37.667 300 172 7 171 467 40 327 1.43e-65 214
Msa0387510 MtrunA17_Chr8g0368281 49.741 193 95 2 276 466 2 194 7.65e-65 207
Msa0387510 MtrunA17_Chr8g0368231 60.800 125 48 1 344 467 8 132 7.12e-50 166
Msa0387510 MtrunA17_Chr3g0138811 29.708 377 216 10 40 414 3 332 1.42e-47 168
Msa0387510 MtrunA17_Chr3g0135431 42.922 219 99 5 104 298 44 260 4.95e-47 167
Msa0387510 MtrunA17_Chr8g0368261 55.814 129 56 1 340 467 1 129 6.11e-47 158
Msa0387510 MtrunA17_Chr8g0368171 47.429 175 69 3 105 277 51 204 1.37e-44 155
Msa0387510 MtrunA17_Chr8g0368271 60.000 120 46 2 89 207 35 153 1.56e-41 146
Msa0387510 MtrunA17_Chr8g0368321 56.296 135 49 4 83 215 22 148 3.86e-41 145
Msa0387510 MtrunA17_Chr3g0135441 34.510 255 135 8 221 467 2 232 3.25e-40 144
Msa0387510 MtrunA17_Chr2g0302691 31.073 354 211 12 119 461 37 368 1.53e-38 144
Msa0387510 MtrunA17_Chr8g0368381 51.639 122 56 3 276 394 2 123 2.16e-38 135
Msa0387510 MtrunA17_Chr8g0339871 37.557 221 124 8 251 461 21 237 7.69e-37 135
Msa0387510 MtrunA17_Chr5g0445181 31.186 295 157 10 108 402 49 297 5.74e-31 121
Msa0387510 MtrunA17_Chr8g0391201 34.685 222 127 9 251 461 21 235 7.65e-31 119
Msa0387510 MtrunA17_Chr2g0302651 31.963 219 115 10 254 461 1 196 5.83e-23 96.3
Msa0387510 MtrunA17_Chr3g0135451 42.336 137 52 5 94 208 29 160 1.29e-22 95.1
Msa0387510 MtrunA17_Chr8g0353931 32.673 202 112 7 88 277 14 203 6.49e-22 93.6
Msa0387510 MtrunA17_Chr8g0353971 34.118 170 105 4 296 461 4 170 3.13e-19 85.1
Msa0387510 MtrunA17_Chr8g0353941 31.414 191 116 6 281 464 1 183 6.62e-19 84.3
Msa0387510 MtrunA17_Chr5g0434771 37.903 124 73 2 293 416 15 134 2.34e-18 82.8
Msa0387510 MtrunA17_Chr5g0426971 25.000 236 147 6 229 460 46 255 3.65e-15 75.5
Msa0387510 MtrunA17_Chr8g0353961 34.000 100 65 1 103 201 31 130 9.24e-15 71.6
Msa0387510 MtrunA17_Chr5g0443801 30.000 110 75 2 232 341 22 129 3.61e-12 65.1
Msa0387510 MtrunA17_Chr3g0135411 55.556 54 22 1 94 147 56 107 4.62e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387510 AT5G50150.1 73.177 384 98 4 87 467 39 420 0.0 605
Msa0387510 AT1G70550.1 70.449 379 110 2 90 467 88 465 0.0 580
Msa0387510 AT1G10750.1 69.393 379 114 2 90 467 90 467 0.0 576
Msa0387510 AT1G23340.2 65.049 412 131 4 57 467 10 409 0.0 574
Msa0387510 AT1G23340.1 65.049 412 131 4 57 467 10 409 0.0 574
Msa0387510 AT1G55360.1 56.709 395 151 8 92 467 29 422 6.78e-161 462
Msa0387510 AT3G13510.1 52.570 428 162 8 57 467 16 419 2.93e-159 457
Msa0387510 AT5G18460.1 56.623 385 149 6 100 466 45 429 3.07e-154 445
Msa0387510 AT5G56530.2 55.381 381 152 6 103 466 40 419 6.35e-154 444
Msa0387510 AT5G56530.1 55.381 381 152 6 103 466 40 419 6.35e-154 444
Msa0387510 AT2G44210.1 52.672 393 165 7 95 467 24 415 3.57e-148 429
Msa0387510 AT2G44210.2 49.880 415 157 8 103 467 32 445 2.22e-142 416
Msa0387510 AT1G23340.3 63.066 287 94 3 57 343 10 284 5.71e-130 378
Msa0387510 AT2G44220.1 49.734 376 173 8 103 467 33 403 5.73e-130 382
Msa0387510 AT2G44240.1 48.128 374 181 8 103 467 33 402 5.17e-120 357
Msa0387510 AT2G17750.1 45.337 386 189 11 95 466 18 395 9.02e-115 343
Msa0387510 AT2G19360.1 44.924 394 184 8 104 466 34 425 1.49e-109 331
Msa0387510 AT3G48230.1 46.111 360 178 7 118 467 20 373 1.42e-107 324
Msa0387510 AT2G44250.1 46.684 377 182 8 104 466 37 408 2.70e-105 319
Msa0387510 AT1G70550.2 69.756 205 61 1 90 294 88 291 8.38e-101 303
Msa0387510 AT5G19170.1 43.200 375 191 8 98 461 2 365 5.85e-97 297
Msa0387510 AT1G10750.2 57.333 225 94 2 90 313 90 313 1.10e-84 265
Msa0387510 AT2G44250.2 46.178 314 157 6 163 466 14 325 1.21e-84 263
Msa0387510 AT5G25950.1 38.329 407 214 8 90 467 34 432 1.31e-84 267
Msa0387510 AT5G25960.1 35.844 385 198 7 90 467 15 357 3.32e-72 232
Msa0387510 AT2G20170.1 36.010 411 232 12 60 461 8 396 3.80e-72 234
Msa0387510 AT2G20170.2 36.010 411 232 12 60 461 8 396 3.80e-72 234
Msa0387510 AT2G20170.3 33.577 411 225 12 60 461 8 379 1.42e-62 208
Msa0387510 AT4G23360.1 32.888 374 223 12 104 461 38 399 1.16e-60 204
Msa0387510 AT4G23370.1 34.492 374 220 13 105 461 36 401 1.59e-60 203
Msa0387510 AT4G23390.1 34.223 412 239 14 61 461 7 397 1.81e-59 201
Msa0387510 AT4G23350.1 31.806 371 232 12 104 461 38 400 3.75e-58 197
Msa0387510 AT4G23380.1 33.155 374 220 13 104 461 39 398 3.85e-58 197
Msa0387510 AT4G23365.1 32.172 373 226 13 104 461 38 398 4.09e-58 197
Msa0387510 AT4G23355.1 32.162 370 230 13 104 461 38 398 8.18e-57 193
Msa0387510 AT2G35250.1 34.211 342 195 9 126 463 24 339 8.36e-48 168
Msa0387510 AT4G15050.1 31.854 383 213 17 103 461 36 394 6.97e-44 159
Msa0387510 AT1G10190.1 31.658 398 222 17 90 461 21 394 2.72e-42 154
Msa0387510 AT4G15053.1 31.250 384 217 15 103 461 40 401 3.16e-40 149
Msa0387510 AT4G10220.1 28.806 427 248 18 54 461 9 398 1.43e-38 144
Msa0387510 AT4G17505.1 28.011 357 198 11 117 467 18 321 2.71e-37 139
Msa0387510 AT2G24950.1 29.178 377 228 15 103 461 54 409 4.63e-37 140
Msa0387510 AT2G27320.1 32.881 295 167 11 128 418 30 297 6.54e-37 138
Msa0387510 AT5G46820.1 28.011 357 225 12 120 461 8 347 2.93e-35 134
Msa0387510 AT5G46810.1 27.221 349 228 11 129 461 11 349 4.28e-34 131
Msa0387510 AT4G23373.1 34.025 241 134 9 109 346 40 258 1.22e-33 129
Msa0387510 AT4G10210.1 27.446 419 241 18 54 448 9 388 5.20e-30 120
Msa0387510 AT5G60380.1 27.350 351 219 15 129 466 44 371 2.09e-29 119
Msa0387510 AT5G46200.1 25.691 362 215 11 129 443 31 385 1.05e-28 117
Msa0387510 AT5G25410.1 26.891 357 232 13 113 461 28 363 1.21e-28 116
Msa0387510 AT4G23080.1 27.356 435 256 22 53 463 8 406 6.18e-27 112
Msa0387510 AT5G05030.1 27.100 369 224 18 111 463 20 359 6.97e-27 111
Msa0387510 AT4G17860.1 27.066 351 210 15 129 461 29 351 1.42e-25 107
Msa0387510 AT2G38255.1 31.527 203 116 6 129 330 14 194 3.58e-25 103
Msa0387510 AT5G11660.1 26.962 293 193 9 179 463 25 304 2.12e-23 100
Msa0387510 AT5G25415.1 28.571 252 142 10 232 463 99 332 1.49e-19 90.1
Msa0387510 AT2G03930.2 42.857 105 56 3 218 320 40 142 2.20e-19 85.5
Msa0387510 AT5G36680.1 26.490 302 187 13 179 466 51 331 5.93e-19 88.2
Msa0387510 AT5G36770.1 26.490 302 187 13 179 466 51 331 5.93e-19 88.2
Msa0387510 AT5G37520.1 31.844 179 100 9 293 462 33 198 1.35e-16 78.6
Msa0387510 AT5G04937.1 28.774 212 125 7 257 461 6 198 2.20e-16 78.2

Find 109 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATCCCTTTGGCCTTTC+TGG 0.032761 3_1:+91459558 None:intergenic
TTTGATCATCCTAAGCTTAA+AGG 0.172683 3_1:-91459703 Msa0387510:CDS
ATCCAAGGTTCTTCACTTAT+TGG 0.181219 3_1:-91458375 Msa0387510:CDS
GATTGTGAATGCTCGTTCTA+AGG 0.242059 3_1:-91457216 Msa0387510:CDS
TAAATCCTTCTTCTGCAAAA+TGG 0.251332 3_1:+91457162 None:intergenic
TTGCTATCTTGTTGTTAGTT+TGG 0.257816 3_1:+91458194 None:intergenic
GAATCTCTCCGTACAGGTTT+TGG 0.268183 3_1:+91459393 None:intergenic
TTTCAGCTGTGGACTGATTC+TGG 0.270068 3_1:-91459507 Msa0387510:CDS
AGCAGGGTAATAACAATGTT+TGG 0.280005 3_1:-91457031 Msa0387510:CDS
AACCGTGGACAGTTTGATAT+TGG 0.280369 3_1:-91458139 Msa0387510:CDS
AGCCAGCAATAACCCATATC+TGG 0.287768 3_1:+91458725 None:intergenic
AATTTAGCTTGTCCCAGATA+TGG 0.289493 3_1:-91458738 Msa0387510:CDS
TGGGTTATTGCTGGCTCCTT+TGG 0.293081 3_1:-91458718 Msa0387510:CDS
GCAAGTTCTATCAAAAGATT+TGG 0.293382 3_1:-91459423 Msa0387510:CDS
TCTTCTGTTGTTCTTCTGAT+TGG 0.306036 3_1:+91459459 None:intergenic
TGCTACAACTTATTGTGTTC+AGG 0.306061 3_1:-91458223 Msa0387510:CDS
GCAGGGTAATAACAATGTTT+GGG 0.312146 3_1:-91457030 Msa0387510:CDS
ACTAACAACAAGATAGCAAT+AGG 0.320394 3_1:-91458190 Msa0387510:CDS
CTGCTTAATGTTATAACAAT+TGG 0.320834 3_1:+91457049 None:intergenic
GAAACTTACAAGTCATTGAT+TGG 0.334217 3_1:-91457121 Msa0387510:CDS
TTGATATTGGCATAATGATT+TGG 0.339854 3_1:-91458126 Msa0387510:CDS
GGGCATTTCACATTTCTTCC+AGG 0.340470 3_1:+91456984 None:intergenic
CAAACATGTTTAGTCACTTA+AGG 0.351583 3_1:-91457271 Msa0387510:CDS
TTGATCATCCTAAGCTTAAA+GGG 0.352738 3_1:-91459702 Msa0387510:CDS
TCCCAGATATGGGTTATTGC+TGG 0.354056 3_1:-91458727 Msa0387510:CDS
CTGATTGGAACAGTTCCTTC+TGG 0.362002 3_1:+91459474 None:intergenic
ATAAGTCTGGTTAGTCTTCA+AGG 0.365189 3_1:+91460112 None:intergenic
GTAAATGGAAATCAATACTT+TGG 0.375350 3_1:-91458811 Msa0387510:CDS
GAGGATTATTAGTTGGATAC+TGG 0.382244 3_1:-91457298 Msa0387510:CDS
CTGAACCTGCTTTATAAGTC+TGG 0.386950 3_1:+91460099 None:intergenic
CATGCAAGCATGGTACAATT+TGG 0.389315 3_1:-91457245 Msa0387510:CDS
CCATTGTTGTAGTATCCCTT+TGG 0.394843 3_1:+91459549 None:intergenic
AACCACCAGTGTCCATGCTT+TGG 0.397011 3_1:+91457329 None:intergenic
GTGTGGTGTGCTACACAATA+TGG 0.403466 3_1:+91460320 None:intergenic
GGTTTATGCCCTTTAAGCTT+AGG 0.407567 3_1:+91459694 None:intergenic
CCACACATTTATGTTTGCCT+TGG 0.423813 3_1:+91458786 None:intergenic
AAGTGACTAAACATGTTTGC+TGG 0.424031 3_1:+91457275 None:intergenic
ATTTAGCTTGTCCCAGATAT+GGG 0.425371 3_1:-91458737 Msa0387510:CDS
TAGTTGTCACCATACAGTTC+TGG 0.435890 3_1:+91458397 None:intergenic
GCCTGAATTGTCTTCACAGC+AGG 0.437481 3_1:+91460026 None:intergenic
TCTTGCTAATATTCATCACT+TGG 0.440337 3_1:-91457081 Msa0387510:CDS
GCCTGCTGTGAAGACAATTC+AGG 0.443029 3_1:-91460027 Msa0387510:intron
GAGTACGGAGGATTATTAGT+TGG 0.443449 3_1:-91457305 Msa0387510:CDS
ACAGATGCATATCAAACAAC+TGG 0.449731 3_1:-91458247 Msa0387510:CDS
CAATCTATCAAATCACCATC+TGG 0.451064 3_1:+91459751 None:intergenic
TACTCTAGAAGCTGGTTGGC+AGG 0.457414 3_1:-91458683 Msa0387510:intron
GGCATTTCACATTTCTTCCA+GGG 0.458404 3_1:+91456985 None:intergenic
CACGGTTATAAGCTGATGTA+GGG 0.467774 3_1:+91458155 None:intergenic
CTAACAACAAGATAGCAATA+GGG 0.470151 3_1:-91458189 Msa0387510:CDS
AAACTTACAAGTCATTGATT+GGG 0.470160 3_1:-91457120 Msa0387510:CDS
CAATTGTTATAACATTAAGC+AGG 0.472121 3_1:-91457048 Msa0387510:CDS
TTACCACACCGACACTCAAA+TGG 0.474382 3_1:-91457192 Msa0387510:CDS
TATCCCTTTGGCCTTTCTGG+TGG 0.482974 3_1:+91459561 None:intergenic
ATACTACAACAATGGAGAAA+AGG 0.486967 3_1:-91459541 Msa0387510:CDS
CCAAAGGGATACTACAACAA+TGG 0.490175 3_1:-91459549 Msa0387510:CDS
AGCTTAGGATGATCAAAAGC+TGG 0.492216 3_1:+91459709 None:intergenic
TAAGTCTGGTTAGTCTTCAA+GGG 0.494109 3_1:+91460113 None:intergenic
CCACGGTTATAAGCTGATGT+AGG 0.497933 3_1:+91458154 None:intergenic
CTAATTGAATCTCTCCGTAC+AGG 0.512104 3_1:+91459387 None:intergenic
AAGTGGACAATATGAGAGAA+TGG 0.513503 3_1:+91460252 None:intergenic
ATTGTGAATGCTCGTTCTAA+GGG 0.526045 3_1:-91457215 Msa0387510:CDS
GCCACTTCCCATTTGAGTGT+CGG 0.531546 3_1:+91457184 None:intergenic
GTCCAATAAGTGAAGAACCT+TGG 0.534669 3_1:+91458373 None:intergenic
GATCTGAATACTCTAGAAGC+TGG 0.535306 3_1:-91458691 Msa0387510:CDS
GCTTAAAGGGCATAAACCAC+TGG 0.535463 3_1:-91459689 Msa0387510:intron
TAGAATTAGAATGGAAGCAA+AGG 0.536775 3_1:-91460378 None:intergenic
CAGTTTCCTTGAAAAGACAT+AGG 0.537425 3_1:-91460349 Msa0387510:CDS
GTGGCTAGAATCTGAGACAA+TGG 0.543283 3_1:+91460136 None:intergenic
CTTAAGGAGTCATGCAAGCA+TGG 0.548826 3_1:-91457255 Msa0387510:CDS
GCCAGCAATAACCCATATCT+GGG 0.550061 3_1:+91458726 None:intergenic
GCAAGCATGGTACAATTTGG+TGG 0.552322 3_1:-91457242 Msa0387510:CDS
TGAATACTCTAGAAGCTGGT+TGG 0.552623 3_1:-91458687 Msa0387510:CDS
CAGGTAAGTCCAGAACTGTA+TGG 0.555180 3_1:-91458406 Msa0387510:CDS
TACCACACCGACACTCAAAT+GGG 0.555983 3_1:-91457191 Msa0387510:CDS
GTTCTATCAAAAGATTTGGA+AGG 0.566425 3_1:-91459419 Msa0387510:CDS
TTCAATTAGCAGTGATCATG+AGG 0.571226 3_1:-91459373 Msa0387510:intron
AATTGTTATAACATTAAGCA+GGG 0.572505 3_1:-91457047 Msa0387510:CDS
TATTGGCATAATGATTTGGA+AGG 0.580599 3_1:-91458122 Msa0387510:intron
AAATCAATACTTTGGAGCCA+AGG 0.583744 3_1:-91458803 Msa0387510:CDS
GATCCACCAGAAAGGCCAAA+GGG 0.583977 3_1:-91459564 Msa0387510:CDS
ACCGACACTCAAATGGGAAG+TGG 0.587290 3_1:-91457185 Msa0387510:CDS
GGACACTGGTGGTTAGAGTA+CGG 0.591126 3_1:-91457320 Msa0387510:CDS
AAGTGATGAATATTAGCAAG+AGG 0.592167 3_1:+91457083 None:intergenic
GAAGGAAACCAAAACCTGTA+CGG 0.593940 3_1:-91459401 Msa0387510:CDS
TAACAACAAGATAGCAATAG+GGG 0.596202 3_1:-91458188 Msa0387510:CDS
TGCCAATATCAAACTGTCCA+CGG 0.597797 3_1:+91458137 None:intergenic
ACTTTGTATCAGAGTCCAGA+TGG 0.600213 3_1:-91459766 Msa0387510:intron
CCAAGGCAAACATAAATGTG+TGG 0.602971 3_1:-91458786 Msa0387510:CDS
GTTTACAGGATCCACCAGAA+AGG 0.603971 3_1:-91459572 Msa0387510:intron
ACTAACCAGACTTATAAAGC+AGG 0.607754 3_1:-91460104 Msa0387510:CDS
TGTGAACAGGATCCAAAGCA+TGG 0.614621 3_1:-91457341 Msa0387510:intron
CAAGGCAAACATAAATGTGT+GGG 0.616077 3_1:-91458785 Msa0387510:CDS
TTCCCATTTGAGTGTCGGTG+TGG 0.620291 3_1:+91457189 None:intergenic
TTAATGAGAAGTTTCAGCTG+TGG 0.623212 3_1:-91459518 Msa0387510:CDS
AAGTCTGGTTAGTCTTCAAG+GGG 0.632401 3_1:+91460114 None:intergenic
TGTATGGTGACAACTATCCA+AGG 0.640778 3_1:-91458390 Msa0387510:CDS
TCATATCCATCTGTTACATG+AGG 0.644566 3_1:+91458760 None:intergenic
CAGGGTAATAACAATGTTTG+GGG 0.644781 3_1:-91457029 Msa0387510:CDS
TCTGGTTAGTCTTCAAGGGG+TGG 0.644987 3_1:+91460117 None:intergenic
TGATGAGAGTGAGACAATGC+TGG 0.646817 3_1:+91460161 None:intergenic
AGTATTCAGATCATTACCAA+AGG 0.647857 3_1:+91458702 None:intergenic
AGGATCCAAAGCATGGACAC+TGG 0.649017 3_1:-91457334 Msa0387510:CDS
TCTGGTGAAGAATGTCCAGA+AGG 0.650833 3_1:-91459489 Msa0387510:CDS
GGATCCACCAGAAAGGCCAA+AGG 0.651755 3_1:-91459565 Msa0387510:CDS
TGGGCACCTCATGTAACAGA+TGG 0.656951 3_1:-91458766 Msa0387510:CDS
ATCCAAAGCATGGACACTGG+TGG 0.664040 3_1:-91457331 Msa0387510:CDS
ACGGTTATAAGCTGATGTAG+GGG 0.689573 3_1:+91458156 None:intergenic
CCTACATCAGCTTATAACCG+TGG 0.701785 3_1:-91458154 Msa0387510:CDS
CACTGGTGGTTAGAGTACGG+AGG 0.713683 3_1:-91457317 Msa0387510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGATATTGAATTTTA+AGG + chr3_1:91458007-91458026 None:intergenic 15.0%
!! AACAATAAACAAACAAAAAC+AGG + chr3_1:91457145-91457164 None:intergenic 20.0%
!!! CCTGATTTATAAATTTTGTA+TGG + chr3_1:91457708-91457727 None:intergenic 20.0%
!! CCATACAAAATTTATAAATC+AGG - chr3_1:91457705-91457724 Msa0387510:intron 20.0%
!!! GATAAATTTTGACAACAATT+TGG - chr3_1:91458089-91458108 Msa0387510:intron 20.0%
!! GTTAATTATGTTGTAAACTA+TGG - chr3_1:91458140-91458159 Msa0387510:CDS 20.0%
!!! CTAATTTTTCTTTCATCAAT+AGG - chr3_1:91458230-91458249 Msa0387510:CDS 20.0%
!!! AATTTTGCTATGAAATTGAA+AGG + chr3_1:91459371-91459390 None:intergenic 20.0%
!! AATTAGAAAAAGAAACATCA+TGG + chr3_1:91459677-91459696 None:intergenic 20.0%
!! ATTGGAAATATGTGTTAAAA+AGG + chr3_1:91459772-91459791 None:intergenic 20.0%
!!! TAAAATAGTGGTTTTATGAT+TGG + chr3_1:91459790-91459809 None:intergenic 20.0%
!! AAAAGTAGTAAGATTAATCA+TGG + chr3_1:91459838-91459857 None:intergenic 20.0%
!!! GATTTTCCTAAAATGTATTT+TGG - chr3_1:91459876-91459895 Msa0387510:intron 20.0%
!! TTAAATATTAGTACAATGCA+AGG - chr3_1:91459968-91459987 Msa0387510:intron 20.0%
!! AATTGTTATAACATTAAGCA+GGG - chr3_1:91460301-91460320 Msa0387510:CDS 20.0%
! GTTATTGAAATTATTACCAG+TGG + chr3_1:91457678-91457697 None:intergenic 25.0%
!!! AATTTTGACAACAATTTGGA+TGG - chr3_1:91458093-91458112 Msa0387510:intron 25.0%
! AACAACGCAATTCAAATATA+TGG - chr3_1:91458118-91458137 Msa0387510:intron 25.0%
! AAATTGTGCATTCATTTATG+AGG - chr3_1:91458195-91458214 Msa0387510:CDS 25.0%
! TCCAGCAAAAACTAAAAAAA+TGG - chr3_1:91458448-91458467 Msa0387510:intron 25.0%
!!! TCCATTTTTTTAGTTTTTGC+TGG + chr3_1:91458452-91458471 None:intergenic 25.0%
!! CATGCAATTCTTTTTGTAAA+TGG - chr3_1:91458522-91458541 Msa0387510:intron 25.0%
! GTAAATGGAAATCAATACTT+TGG - chr3_1:91458537-91458556 Msa0387510:intron 25.0%
! TGCATACTAGTGATAATTTA+GGG + chr3_1:91458714-91458733 None:intergenic 25.0%
! TTGCATACTAGTGATAATTT+AGG + chr3_1:91458715-91458734 None:intergenic 25.0%
! TTATTAAATGAAGCATGAAG+TGG + chr3_1:91458743-91458762 None:intergenic 25.0%
! TTAAGATCAATTACGACTAA+TGG - chr3_1:91458792-91458811 Msa0387510:CDS 25.0%
!! ATTAAGTTGTTTATCGAAAC+AGG + chr3_1:91458819-91458838 None:intergenic 25.0%
!!! ATTTCTAGAATCTAGTTAGT+AGG - chr3_1:91458879-91458898 Msa0387510:intron 25.0%
! TTGATATTGGCATAATGATT+TGG - chr3_1:91459222-91459241 Msa0387510:intron 25.0%
! ACTCAATTCAACAATAATCA+AGG - chr3_1:91459266-91459285 Msa0387510:intron 25.0%
!!! TATGCCTTTGTTGAATTTTT+TGG - chr3_1:91459515-91459534 Msa0387510:CDS 25.0%
! AAATAAAGTAAACTCCACTA+AGG + chr3_1:91459548-91459567 None:intergenic 25.0%
!!! GCTTTAAAAAAGAAACAGTA+AGG + chr3_1:91459576-91459595 None:intergenic 25.0%
! AAAAGAAACATCATGGTTAT+TGG + chr3_1:91459670-91459689 None:intergenic 25.0%
! TCAACATTCTTTGTAACTAT+TGG + chr3_1:91459711-91459730 None:intergenic 25.0%
! GGTTAATTGTCTTAAAATAG+TGG + chr3_1:91459802-91459821 None:intergenic 25.0%
!!! GATTAATCTTACTACTTTTG+TGG - chr3_1:91459839-91459858 Msa0387510:intron 25.0%
!! CATTGACCAAAATACATTTT+AGG + chr3_1:91459885-91459904 None:intergenic 25.0%
!! AAACTTACAAGTCATTGATT+GGG - chr3_1:91460228-91460247 Msa0387510:CDS 25.0%
! CTGCTTAATGTTATAACAAT+TGG + chr3_1:91460302-91460321 None:intergenic 25.0%
! CAATTGTTATAACATTAAGC+AGG - chr3_1:91460300-91460319 Msa0387510:CDS 25.0%
!!! TGGGGAACTTATTTTTATTA+TGG - chr3_1:91460337-91460356 Msa0387510:CDS 25.0%
!!! GGAACTTATTTTTATTATGG+AGG - chr3_1:91460340-91460359 Msa0387510:CDS 25.0%
! TTCTTTCCTATGTCTTTTCA+AGG + chr3_1:91457008-91457027 None:intergenic 30.0%
!!! CAGGCTTATTGATTTTTTTG+AGG + chr3_1:91457306-91457325 None:intergenic 30.0%
TTACTGACATTGAGTATGTT+TGG - chr3_1:91457380-91457399 Msa0387510:intron 30.0%
! ATTGTTTTCATGAACGATCA+TGG + chr3_1:91457510-91457529 None:intergenic 30.0%
TTTGATCATCCTAAGCTTAA+AGG - chr3_1:91457645-91457664 Msa0387510:intron 30.0%
TTGATCATCCTAAGCTTAAA+GGG - chr3_1:91457646-91457665 Msa0387510:intron 30.0%
ATACTACAACAATGGAGAAA+AGG - chr3_1:91457807-91457826 Msa0387510:intron 30.0%
GCAAGTTCTATCAAAAGATT+TGG - chr3_1:91457925-91457944 Msa0387510:intron 30.0%
GTTCTATCAAAAGATTTGGA+AGG - chr3_1:91457929-91457948 Msa0387510:intron 30.0%
AAGTCATAAATTACACGAGA+AGG - chr3_1:91458376-91458395 Msa0387510:CDS 30.0%
! CTTGTACCTACATTGATTAT+TGG - chr3_1:91458404-91458423 Msa0387510:CDS 30.0%
CTGGAAAAGTTATACATGTT+TGG + chr3_1:91458433-91458452 None:intergenic 30.0%
AGTATTCAGATCATTACCAA+AGG + chr3_1:91458649-91458668 None:intergenic 30.0%
TACTAGTGATAATTTAGGGA+GGG + chr3_1:91458710-91458729 None:intergenic 30.0%
ATACTAGTGATAATTTAGGG+AGG + chr3_1:91458711-91458730 None:intergenic 30.0%
TGTAAGCTATATCTTTCTTC+AGG - chr3_1:91458923-91458942 Msa0387510:intron 30.0%
CAAGAAAAGAGGTTGAAATA+AGG + chr3_1:91459044-91459063 None:intergenic 30.0%
AAATCAATGCACAAGAAAAG+AGG + chr3_1:91459055-91459074 None:intergenic 30.0%
!! TTGCTATCTTGTTGTTAGTT+TGG + chr3_1:91459157-91459176 None:intergenic 30.0%
ACTAACAACAAGATAGCAAT+AGG - chr3_1:91459158-91459177 Msa0387510:intron 30.0%
CTAACAACAAGATAGCAATA+GGG - chr3_1:91459159-91459178 Msa0387510:intron 30.0%
TAACAACAAGATAGCAATAG+GGG - chr3_1:91459160-91459179 Msa0387510:intron 30.0%
! TATTGGCATAATGATTTGGA+AGG - chr3_1:91459226-91459245 Msa0387510:intron 30.0%
! TTCTTTTTGCTTAACTCACA+AGG - chr3_1:91459310-91459329 Msa0387510:intron 30.0%
AACTCACAAGGCTTATATAA+TGG - chr3_1:91459322-91459341 Msa0387510:intron 30.0%
!!! CTGTTTCTTTTTTAAAGCAG+TGG - chr3_1:91459578-91459597 Msa0387510:intron 30.0%
AGTTACAAAGAATGTTGAAC+AGG - chr3_1:91459713-91459732 Msa0387510:CDS 30.0%
!! TAATCTTACTACTTTTGTGG+TGG - chr3_1:91459842-91459861 Msa0387510:intron 30.0%
TATTCAACTTTGTCATTGAG+TGG + chr3_1:91459926-91459945 None:intergenic 30.0%
CAAACATGTTTAGTCACTTA+AGG - chr3_1:91460077-91460096 Msa0387510:CDS 30.0%
TAAATCCTTCTTCTGCAAAA+TGG + chr3_1:91460189-91460208 None:intergenic 30.0%
GAAACTTACAAGTCATTGAT+TGG - chr3_1:91460227-91460246 Msa0387510:CDS 30.0%
AAGTGATGAATATTAGCAAG+AGG + chr3_1:91460268-91460287 None:intergenic 30.0%
TCTTGCTAATATTCATCACT+TGG - chr3_1:91460267-91460286 Msa0387510:CDS 30.0%
CAGTTTCCTTGAAAAGACAT+AGG - chr3_1:91456999-91457018 Msa0387510:CDS 35.0%
!!! TATGGTGTTGTCTTTTTGTG+TGG + chr3_1:91457048-91457067 None:intergenic 35.0%
!!! TTGTGTACATGCTTGTTTTG+AGG + chr3_1:91457074-91457093 None:intergenic 35.0%
AAGTGGACAATATGAGAGAA+TGG + chr3_1:91457099-91457118 None:intergenic 35.0%
CAAACAAAAACAGGTAGCAT+AGG + chr3_1:91457136-91457155 None:intergenic 35.0%
!! TAAGTCTGGTTAGTCTTCAA+GGG + chr3_1:91457238-91457257 None:intergenic 35.0%
!! ATAAGTCTGGTTAGTCTTCA+AGG + chr3_1:91457239-91457258 None:intergenic 35.0%
ACTAACCAGACTTATAAAGC+AGG - chr3_1:91457244-91457263 Msa0387510:CDS 35.0%
AATGTCAGTAACAATGTCAC+TGG + chr3_1:91457371-91457390 None:intergenic 35.0%
CAATCTATCAAATCACCATC+TGG + chr3_1:91457600-91457619 None:intergenic 35.0%
TTTGAGAGACAGAAAGTAAG+AGG - chr3_1:91457747-91457766 Msa0387510:intron 35.0%
GACAGAAAGTAAGAGGATTA+AGG - chr3_1:91457754-91457773 Msa0387510:intron 35.0%
GTAAGAGGATTAAGGTTTAC+AGG - chr3_1:91457762-91457781 Msa0387510:intron 35.0%
TTAATGAGAAGTTTCAGCTG+TGG - chr3_1:91457830-91457849 Msa0387510:intron 35.0%
TCTTCTGTTGTTCTTCTGAT+TGG + chr3_1:91457892-91457911 None:intergenic 35.0%
TTCAATTAGCAGTGATCATG+AGG - chr3_1:91457975-91457994 Msa0387510:intron 35.0%
! TGTTCTTTTCTTACTGGCAA+AGG + chr3_1:91458278-91458297 None:intergenic 35.0%
!! TAGTGCTGTTCTTTTCTTAC+TGG + chr3_1:91458284-91458303 None:intergenic 35.0%
AAGAGACAAACAAACACAAG+TGG + chr3_1:91458333-91458352 None:intergenic 35.0%
TGGCATCCAATAATCAATGT+AGG + chr3_1:91458413-91458432 None:intergenic 35.0%
!! AAATCAATACTTTGGAGCCA+AGG - chr3_1:91458545-91458564 Msa0387510:intron 35.0%
CAAGGCAAACATAAATGTGT+GGG - chr3_1:91458563-91458582 Msa0387510:intron 35.0%
TCATATCCATCTGTTACATG+AGG + chr3_1:91458591-91458610 None:intergenic 35.0%
!! AATTTAGCTTGTCCCAGATA+TGG - chr3_1:91458610-91458629 Msa0387510:intron 35.0%
!! ATTTAGCTTGTCCCAGATAT+GGG - chr3_1:91458611-91458630 Msa0387510:intron 35.0%
ACTAGTGATAATTTAGGGAG+GGG + chr3_1:91458709-91458728 None:intergenic 35.0%
ATCCAAGGTTCTTCACTTAT+TGG - chr3_1:91458973-91458992 Msa0387510:intron 35.0%
ACAGATGCATATCAAACAAC+TGG - chr3_1:91459101-91459120 Msa0387510:intron 35.0%
TGCTACAACTTATTGTGTTC+AGG - chr3_1:91459125-91459144 Msa0387510:intron 35.0%
!!! GCCTTTGTTGAATTTTTTGG+CGG - chr3_1:91459518-91459537 Msa0387510:CDS 35.0%
!!! CCTTTGTTGAATTTTTTGGC+GGG - chr3_1:91459519-91459538 Msa0387510:CDS 35.0%
!!! CTTTGTTGAATTTTTTGGCG+GGG - chr3_1:91459520-91459539 Msa0387510:CDS 35.0%
!!! TTTGTTGAATTTTTTGGCGG+GGG - chr3_1:91459521-91459540 Msa0387510:CDS 35.0%
! TTCACGCTTAACTTTTATGC+TGG - chr3_1:91459601-91459620 Msa0387510:intron 35.0%
!! TATGCTGGTCTTACTGTATA+TGG - chr3_1:91459616-91459635 Msa0387510:intron 35.0%
AATCATGGCAAATACACTTG+TGG + chr3_1:91459823-91459842 None:intergenic 35.0%
GCTGAAAAATCATTGTGAAC+AGG - chr3_1:91459994-91460013 Msa0387510:intron 35.0%
GAGGATTATTAGTTGGATAC+TGG - chr3_1:91460050-91460069 Msa0387510:CDS 35.0%
AAGTGACTAAACATGTTTGC+TGG + chr3_1:91460076-91460095 None:intergenic 35.0%
ATTGTGAATGCTCGTTCTAA+GGG - chr3_1:91460133-91460152 Msa0387510:CDS 35.0%
AGCAGGGTAATAACAATGTT+TGG - chr3_1:91460317-91460336 Msa0387510:CDS 35.0%
GCAGGGTAATAACAATGTTT+GGG - chr3_1:91460318-91460337 Msa0387510:CDS 35.0%
CAGGGTAATAACAATGTTTG+GGG - chr3_1:91460319-91460338 Msa0387510:CDS 35.0%
!! TATTTTTATTATGGAGGCCC+TGG - chr3_1:91460346-91460365 Msa0387510:CDS 35.0%
!!! ATGCTTGTTTTGAGGCAGTA+TGG + chr3_1:91457066-91457085 None:intergenic 40.0%
ACAAAAACAGGTAGCATAGG+TGG + chr3_1:91457133-91457152 None:intergenic 40.0%
!! AAGTCTGGTTAGTCTTCAAG+GGG + chr3_1:91457237-91457256 None:intergenic 40.0%
CTGAACCTGCTTTATAAGTC+TGG + chr3_1:91457252-91457271 None:intergenic 40.0%
ACTTTGTATCAGAGTCCAGA+TGG - chr3_1:91457582-91457601 Msa0387510:intron 40.0%
AGCTTAGGATGATCAAAAGC+TGG + chr3_1:91457642-91457661 None:intergenic 40.0%
GGTTTATGCCCTTTAAGCTT+AGG + chr3_1:91457657-91457676 None:intergenic 40.0%
CCATTGTTGTAGTATCCCTT+TGG + chr3_1:91457802-91457821 None:intergenic 40.0%
CCAAAGGGATACTACAACAA+TGG - chr3_1:91457799-91457818 Msa0387510:intron 40.0%
GAAGGAAACCAAAACCTGTA+CGG - chr3_1:91457947-91457966 Msa0387510:intron 40.0%
CTAATTGAATCTCTCCGTAC+AGG + chr3_1:91457964-91457983 None:intergenic 40.0%
TTACTGGCAAAGGAAATGTG+GGG + chr3_1:91458268-91458287 None:intergenic 40.0%
CTTACTGGCAAAGGAAATGT+GGG + chr3_1:91458269-91458288 None:intergenic 40.0%
TCTTACTGGCAAAGGAAATG+TGG + chr3_1:91458270-91458289 None:intergenic 40.0%
ACTACCTTAACAGACAGTGA+AGG - chr3_1:91458300-91458319 Msa0387510:intron 40.0%
CTACCTTAACAGACAGTGAA+GGG - chr3_1:91458301-91458320 Msa0387510:intron 40.0%
CCACACATTTATGTTTGCCT+TGG + chr3_1:91458565-91458584 None:intergenic 40.0%
CCAAGGCAAACATAAATGTG+TGG - chr3_1:91458562-91458581 Msa0387510:intron 40.0%
! GATCTGAATACTCTAGAAGC+TGG - chr3_1:91458657-91458676 Msa0387510:intron 40.0%
! TGAATACTCTAGAAGCTGGT+TGG - chr3_1:91458661-91458680 Msa0387510:intron 40.0%
! TAGGGAGGGGAAAAAGTATA+TGG + chr3_1:91458696-91458715 None:intergenic 40.0%
TAGTTGTCACCATACAGTTC+TGG + chr3_1:91458954-91458973 None:intergenic 40.0%
TGTATGGTGACAACTATCCA+AGG - chr3_1:91458958-91458977 Msa0387510:intron 40.0%
GTCCAATAAGTGAAGAACCT+TGG + chr3_1:91458978-91458997 None:intergenic 40.0%
ACGGTTATAAGCTGATGTAG+GGG + chr3_1:91459195-91459214 None:intergenic 40.0%
CACGGTTATAAGCTGATGTA+GGG + chr3_1:91459196-91459215 None:intergenic 40.0%
AACCGTGGACAGTTTGATAT+TGG - chr3_1:91459209-91459228 Msa0387510:intron 40.0%
TGCCAATATCAAACTGTCCA+CGG + chr3_1:91459214-91459233 None:intergenic 40.0%
CCCGCCAAAAAATTCAACAA+AGG + chr3_1:91459522-91459541 None:intergenic 40.0%
!! TCTTACTACTTTTGTGGTGG+TGG - chr3_1:91459845-91459864 Msa0387510:intron 40.0%
TCAATGTGTCTCTACTCTAG+TGG - chr3_1:91459899-91459918 Msa0387510:intron 40.0%
GAGTACGGAGGATTATTAGT+TGG - chr3_1:91460043-91460062 Msa0387510:CDS 40.0%
CATGCAAGCATGGTACAATT+TGG - chr3_1:91460103-91460122 Msa0387510:CDS 40.0%
GATTGTGAATGCTCGTTCTA+AGG - chr3_1:91460132-91460151 Msa0387510:CDS 40.0%
GGCATTTCACATTTCTTCCA+GGG + chr3_1:91460366-91460385 None:intergenic 40.0%
GTGTGGTGTGCTACACAATA+TGG + chr3_1:91457031-91457050 None:intergenic 45.0%
!!! AGGTGGAGTGTTTTGAGAAG+TGG + chr3_1:91457116-91457135 None:intergenic 45.0%
TGATGAGAGTGAGACAATGC+TGG + chr3_1:91457190-91457209 None:intergenic 45.0%
! GTGGCTAGAATCTGAGACAA+TGG + chr3_1:91457215-91457234 None:intergenic 45.0%
! GCTTAAAGGGCATAAACCAC+TGG - chr3_1:91457659-91457678 Msa0387510:intron 45.0%
GTTTACAGGATCCACCAGAA+AGG - chr3_1:91457776-91457795 Msa0387510:intron 45.0%
! TAGTATCCCTTTGGCCTTTC+TGG + chr3_1:91457793-91457812 None:intergenic 45.0%
! TTTCAGCTGTGGACTGATTC+TGG - chr3_1:91457841-91457860 Msa0387510:intron 45.0%
TCTGGTGAAGAATGTCCAGA+AGG - chr3_1:91457859-91457878 Msa0387510:intron 45.0%
CTGATTGGAACAGTTCCTTC+TGG + chr3_1:91457877-91457896 None:intergenic 45.0%
! GAATCTCTCCGTACAGGTTT+TGG + chr3_1:91457958-91457977 None:intergenic 45.0%
TGTCCCTTCACTGTCTGTTA+AGG + chr3_1:91458307-91458326 None:intergenic 45.0%
! TCCCAGATATGGGTTATTGC+TGG - chr3_1:91458621-91458640 Msa0387510:intron 45.0%
GCCAGCAATAACCCATATCT+GGG + chr3_1:91458625-91458644 None:intergenic 45.0%
AGCCAGCAATAACCCATATC+TGG + chr3_1:91458626-91458645 None:intergenic 45.0%
CAGGTAAGTCCAGAACTGTA+TGG - chr3_1:91458942-91458961 Msa0387510:intron 45.0%
CCACGGTTATAAGCTGATGT+AGG + chr3_1:91459197-91459216 None:intergenic 45.0%
CCTACATCAGCTTATAACCG+TGG - chr3_1:91459194-91459213 Msa0387510:intron 45.0%
!!! ACTACTTTTGTGGTGGTGGT+TGG - chr3_1:91459849-91459868 Msa0387510:intron 45.0%
TGTGAACAGGATCCAAAGCA+TGG - chr3_1:91460007-91460026 Msa0387510:intron 45.0%
CTTAAGGAGTCATGCAAGCA+TGG - chr3_1:91460093-91460112 Msa0387510:CDS 45.0%
GCAAGCATGGTACAATTTGG+TGG - chr3_1:91460106-91460125 Msa0387510:CDS 45.0%
TTACCACACCGACACTCAAA+TGG - chr3_1:91460156-91460175 Msa0387510:CDS 45.0%
TACCACACCGACACTCAAAT+GGG - chr3_1:91460157-91460176 Msa0387510:CDS 45.0%
!! AGTGGCCATTTTGCAGAAGA+AGG - chr3_1:91460181-91460200 Msa0387510:CDS 45.0%
GGGCATTTCACATTTCTTCC+AGG + chr3_1:91460367-91460386 None:intergenic 45.0%
!! AAATATTAAAAAATAAACAA+AGG + chr3_1:91458767-91458786 None:intergenic 5.0%
!! AATATTAATATAACATAAAA+AGG + chr3_1:91459473-91459492 None:intergenic 5.0%
!! TCTGGTTAGTCTTCAAGGGG+TGG + chr3_1:91457234-91457253 None:intergenic 50.0%
GCCTGCTGTGAAGACAATTC+AGG - chr3_1:91457321-91457340 Msa0387510:CDS 50.0%
GCCTGAATTGTCTTCACAGC+AGG + chr3_1:91457325-91457344 None:intergenic 50.0%
GATCCACCAGAAAGGCCAAA+GGG - chr3_1:91457784-91457803 Msa0387510:intron 50.0%
! TATCCCTTTGGCCTTTCTGG+TGG + chr3_1:91457790-91457809 None:intergenic 50.0%
TGGGCACCTCATGTAACAGA+TGG - chr3_1:91458582-91458601 Msa0387510:intron 50.0%
!! TGGGTTATTGCTGGCTCCTT+TGG - chr3_1:91458630-91458649 Msa0387510:intron 50.0%
! TACTCTAGAAGCTGGTTGGC+AGG - chr3_1:91458665-91458684 Msa0387510:intron 50.0%
!!! TTTTGTGGTGGTGGTTGGTG+TGG - chr3_1:91459854-91459873 Msa0387510:intron 50.0%
AGGATCCAAAGCATGGACAC+TGG - chr3_1:91460014-91460033 Msa0387510:intron 50.0%
ATCCAAAGCATGGACACTGG+TGG - chr3_1:91460017-91460036 Msa0387510:intron 50.0%
AACCACCAGTGTCCATGCTT+TGG + chr3_1:91460022-91460041 None:intergenic 50.0%
GGACACTGGTGGTTAGAGTA+CGG - chr3_1:91460028-91460047 Msa0387510:CDS 50.0%
!! TTCCCATTTGAGTGTCGGTG+TGG + chr3_1:91460162-91460181 None:intergenic 50.0%
ACCGACACTCAAATGGGAAG+TGG - chr3_1:91460163-91460182 Msa0387510:CDS 50.0%
GCCACTTCCCATTTGAGTGT+CGG + chr3_1:91460167-91460186 None:intergenic 50.0%
GGATCCACCAGAAAGGCCAA+AGG - chr3_1:91457783-91457802 Msa0387510:intron 55.0%
!! TTTTTGGCGGGGGACCTTAG+TGG - chr3_1:91459531-91459550 Msa0387510:CDS 55.0%
CACTGGTGGTTAGAGTACGG+AGG - chr3_1:91460031-91460050 Msa0387510:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 91456980 91460390 91456980 ID=Msa0387510;Name=Msa0387510
chr3_1 mRNA 91456980 91460390 91456980 ID=Msa0387510-mRNA-1;Parent=Msa0387510;Name=Msa0387510-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|7|0|467
chr3_1 exon 91460028 91460390 91460028 ID=Msa0387510-mRNA-1:exon:25462;Parent=Msa0387510-mRNA-1
chr3_1 exon 91459690 91459776 91459690 ID=Msa0387510-mRNA-1:exon:25461;Parent=Msa0387510-mRNA-1
chr3_1 exon 91459374 91459586 91459374 ID=Msa0387510-mRNA-1:exon:25460;Parent=Msa0387510-mRNA-1
chr3_1 exon 91458684 91458848 91458684 ID=Msa0387510-mRNA-1:exon:25459;Parent=Msa0387510-mRNA-1
chr3_1 exon 91458372 91458425 91458372 ID=Msa0387510-mRNA-1:exon:25458;Parent=Msa0387510-mRNA-1
chr3_1 exon 91458123 91458269 91458123 ID=Msa0387510-mRNA-1:exon:25457;Parent=Msa0387510-mRNA-1
chr3_1 exon 91456980 91457354 91456980 ID=Msa0387510-mRNA-1:exon:25456;Parent=Msa0387510-mRNA-1
chr3_1 CDS 91460028 91460390 91460028 ID=Msa0387510-mRNA-1:cds;Parent=Msa0387510-mRNA-1
chr3_1 CDS 91459690 91459776 91459690 ID=Msa0387510-mRNA-1:cds;Parent=Msa0387510-mRNA-1
chr3_1 CDS 91459374 91459586 91459374 ID=Msa0387510-mRNA-1:cds;Parent=Msa0387510-mRNA-1
chr3_1 CDS 91458684 91458848 91458684 ID=Msa0387510-mRNA-1:cds;Parent=Msa0387510-mRNA-1
chr3_1 CDS 91458372 91458425 91458372 ID=Msa0387510-mRNA-1:cds;Parent=Msa0387510-mRNA-1
chr3_1 CDS 91458123 91458269 91458123 ID=Msa0387510-mRNA-1:cds;Parent=Msa0387510-mRNA-1
chr3_1 CDS 91456980 91457354 91456980 ID=Msa0387510-mRNA-1:cds;Parent=Msa0387510-mRNA-1
Gene Sequence

>Msa0387510

ATGGAAGCAAAGGAATACTCAGTTTCCTTGAAAAGACATAGGAAAGAACCATATTGTGTAGCACACCACACAAAAAGACAACACCATACTGCCTCAAAACAAGCATGTACACAAAACCATTCTCTCATATTGTCCACTTCTCAAAACACTCCACCTATGCTACCTGTTTTTGTTTGTTTATTGTTACTTCTTCTTACTTCAACTACACCAGCATTGTCTCACTCTCATCACTCCATTGTCTCAGATTCTAGCCACCCCTTGAAGACTAACCAGACTTATAAAGCAGGTTCAGAGTTGCTTAAGTTAATAAGAATCAGAACTCACCTCAAAAAAATCAATAAGCCTGCTGTGAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCATCAACAACCAGCTTTTGATCATCCTAAGCTTAAAGGGCATAAACCACTGGATCCACCAGAAAGGCCAAAGGGATACTACAACAATGGAGAAAAGGTTAATGAGAAGTTTCAGCTGTGGACTGATTCTGGTGAAGAATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACAGAAGATGATATTCTAAGAGCAAGTTCTATCAAAAGATTTGGAAGGAAACCAAAACCTGTACGGAGAGATTCAATTAGCAGTGATCATGAGCATGCAATTCTTTTTGTAAATGGAAATCAATACTTTGGAGCCAAGGCAAACATAAATGTGTGGGCACCTCATGTAACAGATGGATATGAATTTAGCTTGTCCCAGATATGGGTTATTGCTGGCTCCTTTGGTAATGATCTGAATACTCTAGAAGCTGGTTGGCAGGTAAGTCCAGAACTGTATGGTGACAACTATCCAAGGTTCTTCACTTATTGGACTACAGATGCATATCAAACAACTGGATGCTACAACTTATTGTGTTCAGGCTTTATCCAAACTAACAACAAGATAGCAATAGGGGCAACAATCTCCCCTACATCAGCTTATAACCGTGGACAGTTTGATATTGGCATAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGTTAGAGTACGGAGGATTATTAGTTGGATACTGGCCAGCAAACATGTTTAGTCACTTAAGGAGTCATGCAAGCATGGTACAATTTGGTGGAGAGATTGTGAATGCTCGTTCTAAGGGTTACCACACCGACACTCAAATGGGAAGTGGCCATTTTGCAGAAGAAGGATTTAAAAAAGCAGCTTATTTTAGAAACTTACAAGTCATTGATTGGGACAATAACTTACTTCCTCTTGCTAATATTCATCACTTGGCTGATCATTCCAATTGTTATAACATTAAGCAGGGTAATAACAATGTTTGGGGAACTTATTTTTATTATGGAGGCCCTGGAAGAAATGTGAAATGCCCATGA
Protein sequence

>Msa0387510

MEAKEYSVSLKRHRKEPYCVAHHTKRQHHTASKQACTQNHSLILSTSQNTPPMLPVFVCLLLLLLTSTTPALSHSHHSIVSDSSHPLKTNQTYKAGSELLKLIRIRTHLKKINKPAVKTIQSPDGDLIDCVLSHQQPAFDHPKLKGHKPLDPPERPKGYYNNGEKVNEKFQLWTDSGEECPEGTVPIRRTTEDDILRASSIKRFGRKPKPVRRDSISSDHEHAILFVNGNQYFGAKANINVWAPHVTDGYEFSLSQIWVIAGSFGNDLNTLEAGWQVSPELYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNKIAIGATISPTSAYNRGQFDIGIMIWKDPKHGHWWLEYGGLLVGYWPANMFSHLRSHASMVQFGGEIVNARSKGYHTDTQMGSGHFAEEGFKKAAYFRNLQVIDWDNNLLPLANIHHLADHSNCYNIKQGNNNVWGTYFYYGGPGRNVKCP*