AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0510980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510980 MtrunA17_Chr3g0117271 95.503 467 19 1 1 467 32 496 0.0 911
Msa0510980 MtrunA17_Chr4g0058771 72.860 479 109 8 6 467 7 481 0.0 699
Msa0510980 MtrunA17_Chr5g0413131 63.203 462 154 8 8 467 16 463 0.0 587
Msa0510980 MtrunA17_Chr8g0368161 68.992 387 117 3 83 467 63 448 0.0 573
Msa0510980 MtrunA17_Chr2g0314461 58.398 387 151 8 83 467 28 406 1.97e-162 464
Msa0510980 MtrunA17_Chr8g0368241 54.306 418 180 6 52 467 6 414 2.07e-161 462
Msa0510980 MtrunA17_Chr7g0274951 57.289 391 143 7 100 466 49 439 1.05e-158 456
Msa0510980 MtrunA17_Chr1g0189961 55.860 401 144 8 100 467 51 451 6.57e-156 450
Msa0510980 MtrunA17_Chr8g0380511 56.021 382 149 7 103 466 35 415 6.88e-156 448
Msa0510980 MtrunA17_Chr2g0314471 56.010 391 163 8 79 467 23 406 1.95e-155 447
Msa0510980 MtrunA17_Chr2g0314451 54.872 390 169 5 79 467 22 405 1.55e-153 442
Msa0510980 MtrunA17_Chr2g0309251 55.670 388 151 7 100 467 40 426 6.34e-153 441
Msa0510980 MtrunA17_Chr8g0368201 54.633 313 125 3 171 467 9 320 1.49e-122 360
Msa0510980 MtrunA17_Chr8g0368291 46.411 418 197 12 58 467 7 405 1.46e-121 360
Msa0510980 MtrunA17_Chr8g0368341 50.862 348 153 8 122 467 4 335 1.10e-117 348
Msa0510980 MtrunA17_Chr3g0129891 41.778 450 171 12 23 466 15 379 4.44e-109 328
Msa0510980 MtrunA17_Chr2g0326371 50.301 332 141 11 147 467 42 360 3.23e-101 307
Msa0510980 MtrunA17_Chr8g0368221 59.514 247 94 3 97 343 18 258 4.90e-101 303
Msa0510980 MtrunA17_Chr8g0368181 64.062 192 69 0 276 467 2 193 1.26e-89 271
Msa0510980 MtrunA17_Chr3g0135381 41.192 386 196 9 104 462 51 432 2.76e-88 277
Msa0510980 MtrunA17_Chr6g0453411 40.323 372 193 9 121 467 8 375 3.02e-86 269
Msa0510980 MtrunA17_Chr3g0135371 38.718 390 208 9 104 467 51 435 1.60e-85 269
Msa0510980 MtrunA17_Chr3g0135401 39.252 321 167 7 167 463 30 346 1.04e-69 225
Msa0510980 MtrunA17_Chr8g0368351 50.000 224 94 5 56 277 41 248 5.49e-68 218
Msa0510980 MtrunA17_Chr8g0368361 50.769 195 92 3 276 467 2 195 2.02e-67 214
Msa0510980 MtrunA17_Chr8g0368331 39.711 277 134 5 221 467 13 286 2.58e-67 217
Msa0510980 MtrunA17_Chr1g0151871 37.667 300 172 7 171 467 40 327 1.43e-65 214
Msa0510980 MtrunA17_Chr8g0368281 49.741 193 95 2 276 466 2 194 7.65e-65 207
Msa0510980 MtrunA17_Chr8g0368231 60.800 125 48 1 344 467 8 132 7.12e-50 166
Msa0510980 MtrunA17_Chr3g0138811 29.708 377 216 10 40 414 3 332 1.42e-47 168
Msa0510980 MtrunA17_Chr3g0135431 42.922 219 99 5 104 298 44 260 4.95e-47 167
Msa0510980 MtrunA17_Chr8g0368261 55.814 129 56 1 340 467 1 129 6.11e-47 158
Msa0510980 MtrunA17_Chr8g0368171 47.429 175 69 3 105 277 51 204 1.37e-44 155
Msa0510980 MtrunA17_Chr8g0368271 60.000 120 46 2 89 207 35 153 1.56e-41 146
Msa0510980 MtrunA17_Chr8g0368321 56.296 135 49 4 83 215 22 148 3.86e-41 145
Msa0510980 MtrunA17_Chr3g0135441 34.510 255 135 8 221 467 2 232 3.25e-40 144
Msa0510980 MtrunA17_Chr2g0302691 31.073 354 211 12 119 461 37 368 1.53e-38 144
Msa0510980 MtrunA17_Chr8g0368381 51.639 122 56 3 276 394 2 123 2.16e-38 135
Msa0510980 MtrunA17_Chr8g0339871 37.557 221 124 8 251 461 21 237 7.69e-37 135
Msa0510980 MtrunA17_Chr5g0445181 31.186 295 157 10 108 402 49 297 5.74e-31 121
Msa0510980 MtrunA17_Chr8g0391201 34.685 222 127 9 251 461 21 235 7.65e-31 119
Msa0510980 MtrunA17_Chr2g0302651 31.963 219 115 10 254 461 1 196 5.83e-23 96.3
Msa0510980 MtrunA17_Chr3g0135451 42.336 137 52 5 94 208 29 160 1.29e-22 95.1
Msa0510980 MtrunA17_Chr8g0353931 32.673 202 112 7 88 277 14 203 6.49e-22 93.6
Msa0510980 MtrunA17_Chr8g0353971 34.118 170 105 4 296 461 4 170 3.13e-19 85.1
Msa0510980 MtrunA17_Chr8g0353941 31.414 191 116 6 281 464 1 183 6.62e-19 84.3
Msa0510980 MtrunA17_Chr5g0434771 37.903 124 73 2 293 416 15 134 2.34e-18 82.8
Msa0510980 MtrunA17_Chr5g0426971 25.000 236 147 6 229 460 46 255 3.65e-15 75.5
Msa0510980 MtrunA17_Chr8g0353961 34.000 100 65 1 103 201 31 130 9.24e-15 71.6
Msa0510980 MtrunA17_Chr5g0443801 30.000 110 75 2 232 341 22 129 3.61e-12 65.1
Msa0510980 MtrunA17_Chr3g0135411 55.556 54 22 1 94 147 56 107 4.62e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510980 AT5G50150.1 73.177 384 98 4 87 467 39 420 0.0 605
Msa0510980 AT1G70550.1 70.449 379 110 2 90 467 88 465 0.0 580
Msa0510980 AT1G10750.1 69.393 379 114 2 90 467 90 467 0.0 576
Msa0510980 AT1G23340.2 65.049 412 131 4 57 467 10 409 0.0 574
Msa0510980 AT1G23340.1 65.049 412 131 4 57 467 10 409 0.0 574
Msa0510980 AT1G55360.1 56.709 395 151 8 92 467 29 422 6.78e-161 462
Msa0510980 AT3G13510.1 52.570 428 162 8 57 467 16 419 2.93e-159 457
Msa0510980 AT5G18460.1 56.623 385 149 6 100 466 45 429 3.07e-154 445
Msa0510980 AT5G56530.2 55.381 381 152 6 103 466 40 419 6.35e-154 444
Msa0510980 AT5G56530.1 55.381 381 152 6 103 466 40 419 6.35e-154 444
Msa0510980 AT2G44210.1 52.672 393 165 7 95 467 24 415 3.57e-148 429
Msa0510980 AT2G44210.2 49.880 415 157 8 103 467 32 445 2.22e-142 416
Msa0510980 AT1G23340.3 63.066 287 94 3 57 343 10 284 5.71e-130 378
Msa0510980 AT2G44220.1 49.734 376 173 8 103 467 33 403 5.73e-130 382
Msa0510980 AT2G44240.1 48.128 374 181 8 103 467 33 402 5.17e-120 357
Msa0510980 AT2G17750.1 45.337 386 189 11 95 466 18 395 9.02e-115 343
Msa0510980 AT2G19360.1 44.924 394 184 8 104 466 34 425 1.49e-109 331
Msa0510980 AT3G48230.1 46.111 360 178 7 118 467 20 373 1.42e-107 324
Msa0510980 AT2G44250.1 46.684 377 182 8 104 466 37 408 2.70e-105 319
Msa0510980 AT1G70550.2 69.756 205 61 1 90 294 88 291 8.38e-101 303
Msa0510980 AT5G19170.1 43.200 375 191 8 98 461 2 365 5.85e-97 297
Msa0510980 AT1G10750.2 57.333 225 94 2 90 313 90 313 1.10e-84 265
Msa0510980 AT2G44250.2 46.178 314 157 6 163 466 14 325 1.21e-84 263
Msa0510980 AT5G25950.1 38.329 407 214 8 90 467 34 432 1.31e-84 267
Msa0510980 AT5G25960.1 35.844 385 198 7 90 467 15 357 3.32e-72 232
Msa0510980 AT2G20170.1 36.010 411 232 12 60 461 8 396 3.80e-72 234
Msa0510980 AT2G20170.2 36.010 411 232 12 60 461 8 396 3.80e-72 234
Msa0510980 AT2G20170.3 33.577 411 225 12 60 461 8 379 1.42e-62 208
Msa0510980 AT4G23360.1 32.888 374 223 12 104 461 38 399 1.16e-60 204
Msa0510980 AT4G23370.1 34.492 374 220 13 105 461 36 401 1.59e-60 203
Msa0510980 AT4G23390.1 34.223 412 239 14 61 461 7 397 1.81e-59 201
Msa0510980 AT4G23350.1 31.806 371 232 12 104 461 38 400 3.75e-58 197
Msa0510980 AT4G23380.1 33.155 374 220 13 104 461 39 398 3.85e-58 197
Msa0510980 AT4G23365.1 32.172 373 226 13 104 461 38 398 4.09e-58 197
Msa0510980 AT4G23355.1 32.162 370 230 13 104 461 38 398 8.18e-57 193
Msa0510980 AT2G35250.1 34.211 342 195 9 126 463 24 339 8.36e-48 168
Msa0510980 AT4G15050.1 31.854 383 213 17 103 461 36 394 6.97e-44 159
Msa0510980 AT1G10190.1 31.658 398 222 17 90 461 21 394 2.72e-42 154
Msa0510980 AT4G15053.1 31.250 384 217 15 103 461 40 401 3.16e-40 149
Msa0510980 AT4G10220.1 28.806 427 248 18 54 461 9 398 1.43e-38 144
Msa0510980 AT4G17505.1 28.011 357 198 11 117 467 18 321 2.71e-37 139
Msa0510980 AT2G24950.1 29.178 377 228 15 103 461 54 409 4.63e-37 140
Msa0510980 AT2G27320.1 32.881 295 167 11 128 418 30 297 6.54e-37 138
Msa0510980 AT5G46820.1 28.011 357 225 12 120 461 8 347 2.93e-35 134
Msa0510980 AT5G46810.1 27.221 349 228 11 129 461 11 349 4.28e-34 131
Msa0510980 AT4G23373.1 34.025 241 134 9 109 346 40 258 1.22e-33 129
Msa0510980 AT4G10210.1 27.446 419 241 18 54 448 9 388 5.20e-30 120
Msa0510980 AT5G60380.1 27.350 351 219 15 129 466 44 371 2.09e-29 119
Msa0510980 AT5G46200.1 25.691 362 215 11 129 443 31 385 1.05e-28 117
Msa0510980 AT5G25410.1 26.891 357 232 13 113 461 28 363 1.21e-28 116
Msa0510980 AT4G23080.1 27.356 435 256 22 53 463 8 406 6.18e-27 112
Msa0510980 AT5G05030.1 27.100 369 224 18 111 463 20 359 6.97e-27 111
Msa0510980 AT4G17860.1 27.066 351 210 15 129 461 29 351 1.42e-25 107
Msa0510980 AT2G38255.1 31.527 203 116 6 129 330 14 194 3.58e-25 103
Msa0510980 AT5G11660.1 26.962 293 193 9 179 463 25 304 2.12e-23 100
Msa0510980 AT5G25415.1 28.571 252 142 10 232 463 99 332 1.49e-19 90.1
Msa0510980 AT2G03930.2 42.857 105 56 3 218 320 40 142 2.20e-19 85.5
Msa0510980 AT5G36680.1 26.490 302 187 13 179 466 51 331 5.93e-19 88.2
Msa0510980 AT5G36770.1 26.490 302 187 13 179 466 51 331 5.93e-19 88.2
Msa0510980 AT5G37520.1 31.844 179 100 9 293 462 33 198 1.35e-16 78.6
Msa0510980 AT5G04937.1 28.774 212 125 7 257 461 6 198 2.20e-16 78.2

Find 109 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATCCCTTTGGCCTTTC+TGG 0.032761 3_4:+60259720 None:intergenic
TTTGATCATCCTAAGCTTAA+AGG 0.172683 3_4:-60259865 Msa0510980:CDS
ATCCAAGGTTCTTCACTTAT+TGG 0.181219 3_4:-60258538 Msa0510980:CDS
GATTGTGAATGCTCGTTCTA+AGG 0.242059 3_4:-60257378 Msa0510980:CDS
TAAATCCTTCTTCTGCAAAA+TGG 0.251332 3_4:+60257324 None:intergenic
TTGCTATCTTGTTGTTAGTT+TGG 0.257816 3_4:+60258357 None:intergenic
GAATCTCTCCGTACAGGTTT+TGG 0.268183 3_4:+60259555 None:intergenic
TTTCAGCTGTGGACTGATTC+TGG 0.270068 3_4:-60259669 Msa0510980:CDS
AGCAGGGTAATAACAATGTT+TGG 0.280005 3_4:-60257193 Msa0510980:CDS
AACCGTGGACAGTTTGATAT+TGG 0.280369 3_4:-60258302 Msa0510980:CDS
AGCCAGCAATAACCCATATC+TGG 0.287768 3_4:+60258887 None:intergenic
AATTTAGCTTGTCCCAGATA+TGG 0.289493 3_4:-60258900 Msa0510980:CDS
TGGGTTATTGCTGGCTCCTT+TGG 0.293081 3_4:-60258880 Msa0510980:CDS
GCAAGTTCTATCAAAAGATT+TGG 0.293382 3_4:-60259585 Msa0510980:CDS
TCTTCTGTTGTTCTTCTGAT+TGG 0.306036 3_4:+60259621 None:intergenic
TGCTACAACTTATTGTGTTC+AGG 0.306061 3_4:-60258386 Msa0510980:CDS
GCAGGGTAATAACAATGTTT+GGG 0.312146 3_4:-60257192 Msa0510980:CDS
ACTAACAACAAGATAGCAAT+AGG 0.320394 3_4:-60258353 Msa0510980:CDS
CTGCTTAATGTTATAACAAT+TGG 0.320834 3_4:+60257211 None:intergenic
GAAACTTACAAGTCATTGAT+TGG 0.334217 3_4:-60257283 Msa0510980:CDS
TTGATATTGGCATAATGATT+TGG 0.339854 3_4:-60258289 Msa0510980:CDS
GGGCATTTCACATTTCTTCC+AGG 0.340470 3_4:+60257146 None:intergenic
CAAACATGTTTAGTCACTTA+AGG 0.351583 3_4:-60257433 Msa0510980:CDS
TTGATCATCCTAAGCTTAAA+GGG 0.352738 3_4:-60259864 Msa0510980:CDS
TCCCAGATATGGGTTATTGC+TGG 0.354056 3_4:-60258889 Msa0510980:CDS
CTGATTGGAACAGTTCCTTC+TGG 0.362002 3_4:+60259636 None:intergenic
ATAAGTCTGGTTAGTCTTCA+AGG 0.365189 3_4:+60260274 None:intergenic
GTAAATGGAAATCAATACTT+TGG 0.375350 3_4:-60258973 Msa0510980:CDS
GAGGATTATTAGTTGGATAC+TGG 0.382244 3_4:-60257460 Msa0510980:CDS
CTGAACCTGCTTTATAAGTC+TGG 0.386950 3_4:+60260261 None:intergenic
CATGCAAGCATGGTACAATT+TGG 0.389315 3_4:-60257407 Msa0510980:CDS
CCATTGTTGTAGTATCCCTT+TGG 0.394843 3_4:+60259711 None:intergenic
AACCACCAGTGTCCATGCTT+TGG 0.397011 3_4:+60257491 None:intergenic
GTGTGGTGTGCTACACAATA+TGG 0.403466 3_4:+60260482 None:intergenic
GGTTTATGCCCTTTAAGCTT+AGG 0.407567 3_4:+60259856 None:intergenic
CCACACATTTATGTTTGCCT+TGG 0.423813 3_4:+60258948 None:intergenic
AAGTGACTAAACATGTTTGC+TGG 0.424031 3_4:+60257437 None:intergenic
ATTTAGCTTGTCCCAGATAT+GGG 0.425371 3_4:-60258899 Msa0510980:CDS
TAGTTGTCACCATACAGTTC+TGG 0.435890 3_4:+60258560 None:intergenic
GCCTGAATTGTCTTCACAGC+AGG 0.437481 3_4:+60260188 None:intergenic
TCTTGCTAATATTCATCACT+TGG 0.440337 3_4:-60257243 Msa0510980:CDS
GCCTGCTGTGAAGACAATTC+AGG 0.443029 3_4:-60260189 Msa0510980:intron
GAGTACGGAGGATTATTAGT+TGG 0.443449 3_4:-60257467 Msa0510980:CDS
ACAGATGCATATCAAACAAC+TGG 0.449731 3_4:-60258410 Msa0510980:CDS
CAATCTATCAAATCACCATC+TGG 0.451064 3_4:+60259913 None:intergenic
TACTCTAGAAGCTGGTTGGC+AGG 0.457414 3_4:-60258845 Msa0510980:intron
GGCATTTCACATTTCTTCCA+GGG 0.458404 3_4:+60257147 None:intergenic
CACGGTTATAAGCTGATGTA+GGG 0.467774 3_4:+60258318 None:intergenic
CTAACAACAAGATAGCAATA+GGG 0.470151 3_4:-60258352 Msa0510980:CDS
AAACTTACAAGTCATTGATT+GGG 0.470160 3_4:-60257282 Msa0510980:CDS
CAATTGTTATAACATTAAGC+AGG 0.472121 3_4:-60257210 Msa0510980:CDS
TTACCACACCGACACTCAAA+TGG 0.474382 3_4:-60257354 Msa0510980:CDS
TATCCCTTTGGCCTTTCTGG+TGG 0.482974 3_4:+60259723 None:intergenic
ATACTACAACAATGGAGAAA+AGG 0.486967 3_4:-60259703 Msa0510980:CDS
CCAAAGGGATACTACAACAA+TGG 0.490175 3_4:-60259711 Msa0510980:CDS
AGCTTAGGATGATCAAAAGC+TGG 0.492216 3_4:+60259871 None:intergenic
TAAGTCTGGTTAGTCTTCAA+GGG 0.494109 3_4:+60260275 None:intergenic
CCACGGTTATAAGCTGATGT+AGG 0.497933 3_4:+60258317 None:intergenic
CTAATTGAATCTCTCCGTAC+AGG 0.512104 3_4:+60259549 None:intergenic
AAGTGGACAATATGAGAGAA+TGG 0.513503 3_4:+60260414 None:intergenic
ATTGTGAATGCTCGTTCTAA+GGG 0.526045 3_4:-60257377 Msa0510980:CDS
GCCACTTCCCATTTGAGTGT+CGG 0.531546 3_4:+60257346 None:intergenic
GTCCAATAAGTGAAGAACCT+TGG 0.534669 3_4:+60258536 None:intergenic
GATCTGAATACTCTAGAAGC+TGG 0.535306 3_4:-60258853 Msa0510980:CDS
GCTTAAAGGGCATAAACCAC+TGG 0.535463 3_4:-60259851 Msa0510980:intron
TAGAATTAGAATGGAAGCAA+AGG 0.536775 3_4:-60260540 None:intergenic
CAGTTTCCTTGAAAAGACAT+AGG 0.537425 3_4:-60260511 Msa0510980:CDS
GTGGCTAGAATCTGAGACAA+TGG 0.543283 3_4:+60260298 None:intergenic
CTTAAGGAGTCATGCAAGCA+TGG 0.548826 3_4:-60257417 Msa0510980:CDS
GCCAGCAATAACCCATATCT+GGG 0.550061 3_4:+60258888 None:intergenic
GCAAGCATGGTACAATTTGG+TGG 0.552322 3_4:-60257404 Msa0510980:CDS
TGAATACTCTAGAAGCTGGT+TGG 0.552623 3_4:-60258849 Msa0510980:CDS
CAGGTAAGTCCAGAACTGTA+TGG 0.555180 3_4:-60258569 Msa0510980:CDS
TACCACACCGACACTCAAAT+GGG 0.555983 3_4:-60257353 Msa0510980:CDS
GTTCTATCAAAAGATTTGGA+AGG 0.566425 3_4:-60259581 Msa0510980:CDS
TTCAATTAGCAGTGATCATG+AGG 0.571226 3_4:-60259535 Msa0510980:intron
AATTGTTATAACATTAAGCA+GGG 0.572505 3_4:-60257209 Msa0510980:CDS
TATTGGCATAATGATTTGGA+AGG 0.580599 3_4:-60258285 Msa0510980:intron
AAATCAATACTTTGGAGCCA+AGG 0.583744 3_4:-60258965 Msa0510980:CDS
GATCCACCAGAAAGGCCAAA+GGG 0.583977 3_4:-60259726 Msa0510980:CDS
ACCGACACTCAAATGGGAAG+TGG 0.587290 3_4:-60257347 Msa0510980:CDS
GGACACTGGTGGTTAGAGTA+CGG 0.591126 3_4:-60257482 Msa0510980:CDS
AAGTGATGAATATTAGCAAG+AGG 0.592167 3_4:+60257245 None:intergenic
GAAGGAAACCAAAACCTGTA+CGG 0.593940 3_4:-60259563 Msa0510980:CDS
TAACAACAAGATAGCAATAG+GGG 0.596202 3_4:-60258351 Msa0510980:CDS
TGCCAATATCAAACTGTCCA+CGG 0.597797 3_4:+60258300 None:intergenic
ACTTTGTATCAGAGTCCAGA+TGG 0.600213 3_4:-60259928 Msa0510980:intron
CCAAGGCAAACATAAATGTG+TGG 0.602971 3_4:-60258948 Msa0510980:CDS
GTTTACAGGATCCACCAGAA+AGG 0.603971 3_4:-60259734 Msa0510980:intron
ACTAACCAGACTTATAAAGC+AGG 0.607754 3_4:-60260266 Msa0510980:CDS
TGTGAACAGGATCCAAAGCA+TGG 0.614621 3_4:-60257503 Msa0510980:intron
CAAGGCAAACATAAATGTGT+GGG 0.616077 3_4:-60258947 Msa0510980:CDS
TTCCCATTTGAGTGTCGGTG+TGG 0.620291 3_4:+60257351 None:intergenic
TTAATGAGAAGTTTCAGCTG+TGG 0.623212 3_4:-60259680 Msa0510980:CDS
AAGTCTGGTTAGTCTTCAAG+GGG 0.632401 3_4:+60260276 None:intergenic
TGTATGGTGACAACTATCCA+AGG 0.640778 3_4:-60258553 Msa0510980:CDS
TCATATCCATCTGTTACATG+AGG 0.644566 3_4:+60258922 None:intergenic
CAGGGTAATAACAATGTTTG+GGG 0.644781 3_4:-60257191 Msa0510980:CDS
TCTGGTTAGTCTTCAAGGGG+TGG 0.644987 3_4:+60260279 None:intergenic
TGATGAGAGTGAGACAATGC+TGG 0.646817 3_4:+60260323 None:intergenic
AGTATTCAGATCATTACCAA+AGG 0.647857 3_4:+60258864 None:intergenic
AGGATCCAAAGCATGGACAC+TGG 0.649017 3_4:-60257496 Msa0510980:CDS
TCTGGTGAAGAATGTCCAGA+AGG 0.650833 3_4:-60259651 Msa0510980:CDS
GGATCCACCAGAAAGGCCAA+AGG 0.651755 3_4:-60259727 Msa0510980:CDS
TGGGCACCTCATGTAACAGA+TGG 0.656951 3_4:-60258928 Msa0510980:CDS
ATCCAAAGCATGGACACTGG+TGG 0.664040 3_4:-60257493 Msa0510980:CDS
ACGGTTATAAGCTGATGTAG+GGG 0.689573 3_4:+60258319 None:intergenic
CCTACATCAGCTTATAACCG+TGG 0.701785 3_4:-60258317 Msa0510980:CDS
CACTGGTGGTTAGAGTACGG+AGG 0.713683 3_4:-60257479 Msa0510980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGATATTGAATTTTA+AGG + chr3_4:60258169-60258188 None:intergenic 15.0%
!! AACAATAAACAAACAAAAAC+AGG + chr3_4:60257307-60257326 None:intergenic 20.0%
!!! CCTGATTTATAAATTTTGTA+TGG + chr3_4:60257870-60257889 None:intergenic 20.0%
!! CCATACAAAATTTATAAATC+AGG - chr3_4:60257867-60257886 Msa0510980:intron 20.0%
!!! GATAAATTTTGACAACAATT+TGG - chr3_4:60258251-60258270 Msa0510980:intron 20.0%
!! GTTAATTATGTTGTAAACTA+TGG - chr3_4:60258302-60258321 Msa0510980:CDS 20.0%
!!! CTAATTTTTCTTTCATCAAT+AGG - chr3_4:60258392-60258411 Msa0510980:CDS 20.0%
!!! AATTTTGCTATGAAATTGAA+AGG + chr3_4:60259532-60259551 None:intergenic 20.0%
!! AATTAGAAAAAGAAACATCA+TGG + chr3_4:60259839-60259858 None:intergenic 20.0%
!! ATTGGAAATATGTGTTAAAA+AGG + chr3_4:60259934-60259953 None:intergenic 20.0%
!!! TAAAATAGTGGTTTTATGAT+TGG + chr3_4:60259952-60259971 None:intergenic 20.0%
!! AAAAGTAGTAAGATTAATCA+TGG + chr3_4:60260000-60260019 None:intergenic 20.0%
!!! GATTTTCCTAAAATGTATTT+TGG - chr3_4:60260038-60260057 Msa0510980:intron 20.0%
!! TTAAATATTAGTACAATGCA+AGG - chr3_4:60260130-60260149 Msa0510980:intron 20.0%
!! AATTGTTATAACATTAAGCA+GGG - chr3_4:60260463-60260482 Msa0510980:CDS 20.0%
! GTTATTGAAATTATTACCAG+TGG + chr3_4:60257840-60257859 None:intergenic 25.0%
!!! AATTTTGACAACAATTTGGA+TGG - chr3_4:60258255-60258274 Msa0510980:intron 25.0%
! AACAACGCAATTCAAATATA+TGG - chr3_4:60258280-60258299 Msa0510980:intron 25.0%
! AAATTGTGCATTCATTTATG+AGG - chr3_4:60258357-60258376 Msa0510980:CDS 25.0%
! TCCAGCAAAAACTAAAAAAA+TGG - chr3_4:60258610-60258629 Msa0510980:intron 25.0%
!!! TCCATTTTTTTAGTTTTTGC+TGG + chr3_4:60258614-60258633 None:intergenic 25.0%
!! CATGCAATTCTTTTTGTAAA+TGG - chr3_4:60258684-60258703 Msa0510980:intron 25.0%
! GTAAATGGAAATCAATACTT+TGG - chr3_4:60258699-60258718 Msa0510980:intron 25.0%
! TGCATACTAGTGATAATTTA+GGG + chr3_4:60258876-60258895 None:intergenic 25.0%
! TTGCATACTAGTGATAATTT+AGG + chr3_4:60258877-60258896 None:intergenic 25.0%
! TTATTAAATGAAGCATGAAG+TGG + chr3_4:60258905-60258924 None:intergenic 25.0%
! TTAAGATCAATTACGACTAA+TGG - chr3_4:60258953-60258972 Msa0510980:CDS 25.0%
!! ATTAAGTTGTTTATCGAAAC+AGG + chr3_4:60258980-60258999 None:intergenic 25.0%
!!! ATTTCTAGAATCTAGTTAGT+AGG - chr3_4:60259040-60259059 Msa0510980:intron 25.0%
! TTGATATTGGCATAATGATT+TGG - chr3_4:60259383-60259402 Msa0510980:intron 25.0%
! ACTCAATTCAACAATAATCA+AGG - chr3_4:60259427-60259446 Msa0510980:intron 25.0%
!!! TATGCCTTTGTTGAATTTTT+TGG - chr3_4:60259677-60259696 Msa0510980:CDS 25.0%
! AAATAAAGTAAACTCCACTA+AGG + chr3_4:60259710-60259729 None:intergenic 25.0%
!!! GCTTTAAAAAAGAAACAGTA+AGG + chr3_4:60259738-60259757 None:intergenic 25.0%
! AAAAGAAACATCATGGTTAT+TGG + chr3_4:60259832-60259851 None:intergenic 25.0%
! TCAACATTCTTTGTAACTAT+TGG + chr3_4:60259873-60259892 None:intergenic 25.0%
! GGTTAATTGTCTTAAAATAG+TGG + chr3_4:60259964-60259983 None:intergenic 25.0%
!!! GATTAATCTTACTACTTTTG+TGG - chr3_4:60260001-60260020 Msa0510980:intron 25.0%
!! CATTGACCAAAATACATTTT+AGG + chr3_4:60260047-60260066 None:intergenic 25.0%
!! AAACTTACAAGTCATTGATT+GGG - chr3_4:60260390-60260409 Msa0510980:CDS 25.0%
! CTGCTTAATGTTATAACAAT+TGG + chr3_4:60260464-60260483 None:intergenic 25.0%
! CAATTGTTATAACATTAAGC+AGG - chr3_4:60260462-60260481 Msa0510980:CDS 25.0%
!!! TGGGGAACTTATTTTTATTA+TGG - chr3_4:60260499-60260518 Msa0510980:CDS 25.0%
!!! GGAACTTATTTTTATTATGG+AGG - chr3_4:60260502-60260521 Msa0510980:CDS 25.0%
! TTCTTTCCTATGTCTTTTCA+AGG + chr3_4:60257170-60257189 None:intergenic 30.0%
!!! CAGGCTTATTGATTTTTTTG+AGG + chr3_4:60257468-60257487 None:intergenic 30.0%
TTACTGACATTGAGTATGTT+TGG - chr3_4:60257542-60257561 Msa0510980:intron 30.0%
! ATTGTTTTCATGAACGATCA+TGG + chr3_4:60257672-60257691 None:intergenic 30.0%
TTTGATCATCCTAAGCTTAA+AGG - chr3_4:60257807-60257826 Msa0510980:intron 30.0%
TTGATCATCCTAAGCTTAAA+GGG - chr3_4:60257808-60257827 Msa0510980:intron 30.0%
ATACTACAACAATGGAGAAA+AGG - chr3_4:60257969-60257988 Msa0510980:intron 30.0%
GCAAGTTCTATCAAAAGATT+TGG - chr3_4:60258087-60258106 Msa0510980:intron 30.0%
GTTCTATCAAAAGATTTGGA+AGG - chr3_4:60258091-60258110 Msa0510980:intron 30.0%
AAGTCATAAATTACACGAGA+AGG - chr3_4:60258538-60258557 Msa0510980:CDS 30.0%
! CTTGTACCTACATTGATTAT+TGG - chr3_4:60258566-60258585 Msa0510980:CDS 30.0%
CTGGAAAAGTTATACATGTT+TGG + chr3_4:60258595-60258614 None:intergenic 30.0%
AGTATTCAGATCATTACCAA+AGG + chr3_4:60258811-60258830 None:intergenic 30.0%
TACTAGTGATAATTTAGGGA+GGG + chr3_4:60258872-60258891 None:intergenic 30.0%
ATACTAGTGATAATTTAGGG+AGG + chr3_4:60258873-60258892 None:intergenic 30.0%
TGTAAGCTATATCTTTCTTC+AGG - chr3_4:60259084-60259103 Msa0510980:intron 30.0%
CAAGAAAAGAGGTTGAAATA+AGG + chr3_4:60259205-60259224 None:intergenic 30.0%
AAATCAATGCACAAGAAAAG+AGG + chr3_4:60259216-60259235 None:intergenic 30.0%
!! TTGCTATCTTGTTGTTAGTT+TGG + chr3_4:60259318-60259337 None:intergenic 30.0%
ACTAACAACAAGATAGCAAT+AGG - chr3_4:60259319-60259338 Msa0510980:intron 30.0%
CTAACAACAAGATAGCAATA+GGG - chr3_4:60259320-60259339 Msa0510980:intron 30.0%
TAACAACAAGATAGCAATAG+GGG - chr3_4:60259321-60259340 Msa0510980:intron 30.0%
! TATTGGCATAATGATTTGGA+AGG - chr3_4:60259387-60259406 Msa0510980:intron 30.0%
! TTCTTTTTGCTTAACTCACA+AGG - chr3_4:60259471-60259490 Msa0510980:intron 30.0%
AACTCACAAGGCTTATATAA+TGG - chr3_4:60259483-60259502 Msa0510980:intron 30.0%
!!! CTGTTTCTTTTTTAAAGCAG+TGG - chr3_4:60259740-60259759 Msa0510980:intron 30.0%
AGTTACAAAGAATGTTGAAC+AGG - chr3_4:60259875-60259894 Msa0510980:CDS 30.0%
!! TAATCTTACTACTTTTGTGG+TGG - chr3_4:60260004-60260023 Msa0510980:intron 30.0%
TATTCAACTTTGTCATTGAG+TGG + chr3_4:60260088-60260107 None:intergenic 30.0%
CAAACATGTTTAGTCACTTA+AGG - chr3_4:60260239-60260258 Msa0510980:CDS 30.0%
TAAATCCTTCTTCTGCAAAA+TGG + chr3_4:60260351-60260370 None:intergenic 30.0%
GAAACTTACAAGTCATTGAT+TGG - chr3_4:60260389-60260408 Msa0510980:CDS 30.0%
AAGTGATGAATATTAGCAAG+AGG + chr3_4:60260430-60260449 None:intergenic 30.0%
TCTTGCTAATATTCATCACT+TGG - chr3_4:60260429-60260448 Msa0510980:CDS 30.0%
CAGTTTCCTTGAAAAGACAT+AGG - chr3_4:60257161-60257180 Msa0510980:CDS 35.0%
!!! TATGGTGTTGTCTTTTTGTG+TGG + chr3_4:60257210-60257229 None:intergenic 35.0%
!!! TTGTGTACATGCTTGTTTTG+AGG + chr3_4:60257236-60257255 None:intergenic 35.0%
AAGTGGACAATATGAGAGAA+TGG + chr3_4:60257261-60257280 None:intergenic 35.0%
CAAACAAAAACAGGTAGCAT+AGG + chr3_4:60257298-60257317 None:intergenic 35.0%
!! TAAGTCTGGTTAGTCTTCAA+GGG + chr3_4:60257400-60257419 None:intergenic 35.0%
!! ATAAGTCTGGTTAGTCTTCA+AGG + chr3_4:60257401-60257420 None:intergenic 35.0%
ACTAACCAGACTTATAAAGC+AGG - chr3_4:60257406-60257425 Msa0510980:CDS 35.0%
AATGTCAGTAACAATGTCAC+TGG + chr3_4:60257533-60257552 None:intergenic 35.0%
CAATCTATCAAATCACCATC+TGG + chr3_4:60257762-60257781 None:intergenic 35.0%
TTTGAGAGACAGAAAGTAAG+AGG - chr3_4:60257909-60257928 Msa0510980:intron 35.0%
GACAGAAAGTAAGAGGATTA+AGG - chr3_4:60257916-60257935 Msa0510980:intron 35.0%
GTAAGAGGATTAAGGTTTAC+AGG - chr3_4:60257924-60257943 Msa0510980:intron 35.0%
TTAATGAGAAGTTTCAGCTG+TGG - chr3_4:60257992-60258011 Msa0510980:intron 35.0%
TCTTCTGTTGTTCTTCTGAT+TGG + chr3_4:60258054-60258073 None:intergenic 35.0%
TTCAATTAGCAGTGATCATG+AGG - chr3_4:60258137-60258156 Msa0510980:intron 35.0%
! TGTTCTTTTCTTACTGGCAA+AGG + chr3_4:60258440-60258459 None:intergenic 35.0%
!! TAGTGCTGTTCTTTTCTTAC+TGG + chr3_4:60258446-60258465 None:intergenic 35.0%
AAGAGACAAACAAACACAAG+TGG + chr3_4:60258495-60258514 None:intergenic 35.0%
TGGCATCCAATAATCAATGT+AGG + chr3_4:60258575-60258594 None:intergenic 35.0%
!! AAATCAATACTTTGGAGCCA+AGG - chr3_4:60258707-60258726 Msa0510980:intron 35.0%
CAAGGCAAACATAAATGTGT+GGG - chr3_4:60258725-60258744 Msa0510980:intron 35.0%
TCATATCCATCTGTTACATG+AGG + chr3_4:60258753-60258772 None:intergenic 35.0%
!! AATTTAGCTTGTCCCAGATA+TGG - chr3_4:60258772-60258791 Msa0510980:intron 35.0%
!! ATTTAGCTTGTCCCAGATAT+GGG - chr3_4:60258773-60258792 Msa0510980:intron 35.0%
ACTAGTGATAATTTAGGGAG+GGG + chr3_4:60258871-60258890 None:intergenic 35.0%
ATCCAAGGTTCTTCACTTAT+TGG - chr3_4:60259134-60259153 Msa0510980:intron 35.0%
ACAGATGCATATCAAACAAC+TGG - chr3_4:60259262-60259281 Msa0510980:intron 35.0%
TGCTACAACTTATTGTGTTC+AGG - chr3_4:60259286-60259305 Msa0510980:intron 35.0%
!!! GCCTTTGTTGAATTTTTTGG+CGG - chr3_4:60259680-60259699 Msa0510980:CDS 35.0%
!!! CCTTTGTTGAATTTTTTGGC+GGG - chr3_4:60259681-60259700 Msa0510980:CDS 35.0%
!!! CTTTGTTGAATTTTTTGGCG+GGG - chr3_4:60259682-60259701 Msa0510980:CDS 35.0%
!!! TTTGTTGAATTTTTTGGCGG+GGG - chr3_4:60259683-60259702 Msa0510980:CDS 35.0%
! TTCACGCTTAACTTTTATGC+TGG - chr3_4:60259763-60259782 Msa0510980:intron 35.0%
!! TATGCTGGTCTTACTGTATA+TGG - chr3_4:60259778-60259797 Msa0510980:intron 35.0%
AATCATGGCAAATACACTTG+TGG + chr3_4:60259985-60260004 None:intergenic 35.0%
GCTGAAAAATCATTGTGAAC+AGG - chr3_4:60260156-60260175 Msa0510980:intron 35.0%
GAGGATTATTAGTTGGATAC+TGG - chr3_4:60260212-60260231 Msa0510980:CDS 35.0%
AAGTGACTAAACATGTTTGC+TGG + chr3_4:60260238-60260257 None:intergenic 35.0%
ATTGTGAATGCTCGTTCTAA+GGG - chr3_4:60260295-60260314 Msa0510980:CDS 35.0%
AGCAGGGTAATAACAATGTT+TGG - chr3_4:60260479-60260498 Msa0510980:CDS 35.0%
GCAGGGTAATAACAATGTTT+GGG - chr3_4:60260480-60260499 Msa0510980:CDS 35.0%
CAGGGTAATAACAATGTTTG+GGG - chr3_4:60260481-60260500 Msa0510980:CDS 35.0%
!! TATTTTTATTATGGAGGCCC+TGG - chr3_4:60260508-60260527 Msa0510980:CDS 35.0%
!!! ATGCTTGTTTTGAGGCAGTA+TGG + chr3_4:60257228-60257247 None:intergenic 40.0%
ACAAAAACAGGTAGCATAGG+TGG + chr3_4:60257295-60257314 None:intergenic 40.0%
!! AAGTCTGGTTAGTCTTCAAG+GGG + chr3_4:60257399-60257418 None:intergenic 40.0%
CTGAACCTGCTTTATAAGTC+TGG + chr3_4:60257414-60257433 None:intergenic 40.0%
ACTTTGTATCAGAGTCCAGA+TGG - chr3_4:60257744-60257763 Msa0510980:intron 40.0%
AGCTTAGGATGATCAAAAGC+TGG + chr3_4:60257804-60257823 None:intergenic 40.0%
GGTTTATGCCCTTTAAGCTT+AGG + chr3_4:60257819-60257838 None:intergenic 40.0%
CCATTGTTGTAGTATCCCTT+TGG + chr3_4:60257964-60257983 None:intergenic 40.0%
CCAAAGGGATACTACAACAA+TGG - chr3_4:60257961-60257980 Msa0510980:intron 40.0%
GAAGGAAACCAAAACCTGTA+CGG - chr3_4:60258109-60258128 Msa0510980:intron 40.0%
CTAATTGAATCTCTCCGTAC+AGG + chr3_4:60258126-60258145 None:intergenic 40.0%
TTACTGGCAAAGGAAATGTG+GGG + chr3_4:60258430-60258449 None:intergenic 40.0%
CTTACTGGCAAAGGAAATGT+GGG + chr3_4:60258431-60258450 None:intergenic 40.0%
TCTTACTGGCAAAGGAAATG+TGG + chr3_4:60258432-60258451 None:intergenic 40.0%
ACTACCTTAACAGACAGTGA+AGG - chr3_4:60258462-60258481 Msa0510980:intron 40.0%
CTACCTTAACAGACAGTGAA+GGG - chr3_4:60258463-60258482 Msa0510980:intron 40.0%
CCACACATTTATGTTTGCCT+TGG + chr3_4:60258727-60258746 None:intergenic 40.0%
CCAAGGCAAACATAAATGTG+TGG - chr3_4:60258724-60258743 Msa0510980:intron 40.0%
! GATCTGAATACTCTAGAAGC+TGG - chr3_4:60258819-60258838 Msa0510980:intron 40.0%
! TGAATACTCTAGAAGCTGGT+TGG - chr3_4:60258823-60258842 Msa0510980:intron 40.0%
! TAGGGAGGGGAAAAAGTATA+TGG + chr3_4:60258858-60258877 None:intergenic 40.0%
TAGTTGTCACCATACAGTTC+TGG + chr3_4:60259115-60259134 None:intergenic 40.0%
TGTATGGTGACAACTATCCA+AGG - chr3_4:60259119-60259138 Msa0510980:intron 40.0%
GTCCAATAAGTGAAGAACCT+TGG + chr3_4:60259139-60259158 None:intergenic 40.0%
ACGGTTATAAGCTGATGTAG+GGG + chr3_4:60259356-60259375 None:intergenic 40.0%
CACGGTTATAAGCTGATGTA+GGG + chr3_4:60259357-60259376 None:intergenic 40.0%
AACCGTGGACAGTTTGATAT+TGG - chr3_4:60259370-60259389 Msa0510980:intron 40.0%
TGCCAATATCAAACTGTCCA+CGG + chr3_4:60259375-60259394 None:intergenic 40.0%
CCCGCCAAAAAATTCAACAA+AGG + chr3_4:60259684-60259703 None:intergenic 40.0%
!! TCTTACTACTTTTGTGGTGG+TGG - chr3_4:60260007-60260026 Msa0510980:intron 40.0%
TCAATGTGTCTCTACTCTAG+TGG - chr3_4:60260061-60260080 Msa0510980:intron 40.0%
GAGTACGGAGGATTATTAGT+TGG - chr3_4:60260205-60260224 Msa0510980:CDS 40.0%
CATGCAAGCATGGTACAATT+TGG - chr3_4:60260265-60260284 Msa0510980:CDS 40.0%
GATTGTGAATGCTCGTTCTA+AGG - chr3_4:60260294-60260313 Msa0510980:CDS 40.0%
GGCATTTCACATTTCTTCCA+GGG + chr3_4:60260528-60260547 None:intergenic 40.0%
GTGTGGTGTGCTACACAATA+TGG + chr3_4:60257193-60257212 None:intergenic 45.0%
!!! AGGTGGAGTGTTTTGAGAAG+TGG + chr3_4:60257278-60257297 None:intergenic 45.0%
TGATGAGAGTGAGACAATGC+TGG + chr3_4:60257352-60257371 None:intergenic 45.0%
! GTGGCTAGAATCTGAGACAA+TGG + chr3_4:60257377-60257396 None:intergenic 45.0%
! GCTTAAAGGGCATAAACCAC+TGG - chr3_4:60257821-60257840 Msa0510980:intron 45.0%
GTTTACAGGATCCACCAGAA+AGG - chr3_4:60257938-60257957 Msa0510980:intron 45.0%
! TAGTATCCCTTTGGCCTTTC+TGG + chr3_4:60257955-60257974 None:intergenic 45.0%
! TTTCAGCTGTGGACTGATTC+TGG - chr3_4:60258003-60258022 Msa0510980:intron 45.0%
TCTGGTGAAGAATGTCCAGA+AGG - chr3_4:60258021-60258040 Msa0510980:intron 45.0%
CTGATTGGAACAGTTCCTTC+TGG + chr3_4:60258039-60258058 None:intergenic 45.0%
! GAATCTCTCCGTACAGGTTT+TGG + chr3_4:60258120-60258139 None:intergenic 45.0%
TGTCCCTTCACTGTCTGTTA+AGG + chr3_4:60258469-60258488 None:intergenic 45.0%
! TCCCAGATATGGGTTATTGC+TGG - chr3_4:60258783-60258802 Msa0510980:intron 45.0%
GCCAGCAATAACCCATATCT+GGG + chr3_4:60258787-60258806 None:intergenic 45.0%
AGCCAGCAATAACCCATATC+TGG + chr3_4:60258788-60258807 None:intergenic 45.0%
CAGGTAAGTCCAGAACTGTA+TGG - chr3_4:60259103-60259122 Msa0510980:intron 45.0%
CCACGGTTATAAGCTGATGT+AGG + chr3_4:60259358-60259377 None:intergenic 45.0%
CCTACATCAGCTTATAACCG+TGG - chr3_4:60259355-60259374 Msa0510980:intron 45.0%
!!! ACTACTTTTGTGGTGGTGGT+TGG - chr3_4:60260011-60260030 Msa0510980:intron 45.0%
TGTGAACAGGATCCAAAGCA+TGG - chr3_4:60260169-60260188 Msa0510980:intron 45.0%
CTTAAGGAGTCATGCAAGCA+TGG - chr3_4:60260255-60260274 Msa0510980:CDS 45.0%
GCAAGCATGGTACAATTTGG+TGG - chr3_4:60260268-60260287 Msa0510980:CDS 45.0%
TTACCACACCGACACTCAAA+TGG - chr3_4:60260318-60260337 Msa0510980:CDS 45.0%
TACCACACCGACACTCAAAT+GGG - chr3_4:60260319-60260338 Msa0510980:CDS 45.0%
!! AGTGGCCATTTTGCAGAAGA+AGG - chr3_4:60260343-60260362 Msa0510980:CDS 45.0%
GGGCATTTCACATTTCTTCC+AGG + chr3_4:60260529-60260548 None:intergenic 45.0%
!! AAAATATTAAAAATAAACAA+AGG + chr3_4:60258929-60258948 None:intergenic 5.0%
!! AATATTAATATAACATAAAA+AGG + chr3_4:60259634-60259653 None:intergenic 5.0%
!! TCTGGTTAGTCTTCAAGGGG+TGG + chr3_4:60257396-60257415 None:intergenic 50.0%
GCCTGCTGTGAAGACAATTC+AGG - chr3_4:60257483-60257502 Msa0510980:CDS 50.0%
GCCTGAATTGTCTTCACAGC+AGG + chr3_4:60257487-60257506 None:intergenic 50.0%
GATCCACCAGAAAGGCCAAA+GGG - chr3_4:60257946-60257965 Msa0510980:intron 50.0%
! TATCCCTTTGGCCTTTCTGG+TGG + chr3_4:60257952-60257971 None:intergenic 50.0%
TGGGCACCTCATGTAACAGA+TGG - chr3_4:60258744-60258763 Msa0510980:intron 50.0%
!! TGGGTTATTGCTGGCTCCTT+TGG - chr3_4:60258792-60258811 Msa0510980:intron 50.0%
! TACTCTAGAAGCTGGTTGGC+AGG - chr3_4:60258827-60258846 Msa0510980:intron 50.0%
!!! TTTTGTGGTGGTGGTTGGTG+TGG - chr3_4:60260016-60260035 Msa0510980:intron 50.0%
AGGATCCAAAGCATGGACAC+TGG - chr3_4:60260176-60260195 Msa0510980:intron 50.0%
ATCCAAAGCATGGACACTGG+TGG - chr3_4:60260179-60260198 Msa0510980:intron 50.0%
AACCACCAGTGTCCATGCTT+TGG + chr3_4:60260184-60260203 None:intergenic 50.0%
GGACACTGGTGGTTAGAGTA+CGG - chr3_4:60260190-60260209 Msa0510980:CDS 50.0%
!! TTCCCATTTGAGTGTCGGTG+TGG + chr3_4:60260324-60260343 None:intergenic 50.0%
ACCGACACTCAAATGGGAAG+TGG - chr3_4:60260325-60260344 Msa0510980:CDS 50.0%
GCCACTTCCCATTTGAGTGT+CGG + chr3_4:60260329-60260348 None:intergenic 50.0%
GGATCCACCAGAAAGGCCAA+AGG - chr3_4:60257945-60257964 Msa0510980:intron 55.0%
!! TTTTTGGCGGGGGACCTTAG+TGG - chr3_4:60259693-60259712 Msa0510980:CDS 55.0%
CACTGGTGGTTAGAGTACGG+AGG - chr3_4:60260193-60260212 Msa0510980:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 60257142 60260552 60257142 ID=Msa0510980;Name=Msa0510980
chr3_4 mRNA 60257142 60260552 60257142 ID=Msa0510980-mRNA-1;Parent=Msa0510980;Name=Msa0510980-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|7|0|467
chr3_4 exon 60260190 60260552 60260190 ID=Msa0510980-mRNA-1:exon:14341;Parent=Msa0510980-mRNA-1
chr3_4 exon 60259852 60259938 60259852 ID=Msa0510980-mRNA-1:exon:14340;Parent=Msa0510980-mRNA-1
chr3_4 exon 60259536 60259748 60259536 ID=Msa0510980-mRNA-1:exon:14339;Parent=Msa0510980-mRNA-1
chr3_4 exon 60258846 60259010 60258846 ID=Msa0510980-mRNA-1:exon:14338;Parent=Msa0510980-mRNA-1
chr3_4 exon 60258535 60258588 60258535 ID=Msa0510980-mRNA-1:exon:14337;Parent=Msa0510980-mRNA-1
chr3_4 exon 60258286 60258432 60258286 ID=Msa0510980-mRNA-1:exon:14336;Parent=Msa0510980-mRNA-1
chr3_4 exon 60257142 60257516 60257142 ID=Msa0510980-mRNA-1:exon:14335;Parent=Msa0510980-mRNA-1
chr3_4 CDS 60260190 60260552 60260190 ID=Msa0510980-mRNA-1:cds;Parent=Msa0510980-mRNA-1
chr3_4 CDS 60259852 60259938 60259852 ID=Msa0510980-mRNA-1:cds;Parent=Msa0510980-mRNA-1
chr3_4 CDS 60259536 60259748 60259536 ID=Msa0510980-mRNA-1:cds;Parent=Msa0510980-mRNA-1
chr3_4 CDS 60258846 60259010 60258846 ID=Msa0510980-mRNA-1:cds;Parent=Msa0510980-mRNA-1
chr3_4 CDS 60258535 60258588 60258535 ID=Msa0510980-mRNA-1:cds;Parent=Msa0510980-mRNA-1
chr3_4 CDS 60258286 60258432 60258286 ID=Msa0510980-mRNA-1:cds;Parent=Msa0510980-mRNA-1
chr3_4 CDS 60257142 60257516 60257142 ID=Msa0510980-mRNA-1:cds;Parent=Msa0510980-mRNA-1
Gene Sequence

>Msa0510980

ATGGAAGCAAAGGAATACTCAGTTTCCTTGAAAAGACATAGGAAAGAACCATATTGTGTAGCACACCACACAAAAAGACAACACCATACTGCCTCAAAACAAGCATGTACACAAAACCATTCTCTCATATTGTCCACTTCTCAAAACACTCCACCTATGCTACCTGTTTTTGTTTGTTTATTGTTACTTCTTCTTACTTCAACTACACCAGCATTGTCTCACTCTCATCACTCCATTGTCTCAGATTCTAGCCACCCCTTGAAGACTAACCAGACTTATAAAGCAGGTTCAGAGTTGCTTAAGTTAATAAGAATCAGAACTCACCTCAAAAAAATCAATAAGCCTGCTGTGAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCATCAACAACCAGCTTTTGATCATCCTAAGCTTAAAGGGCATAAACCACTGGATCCACCAGAAAGGCCAAAGGGATACTACAACAATGGAGAAAAGGTTAATGAGAAGTTTCAGCTGTGGACTGATTCTGGTGAAGAATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACAGAAGATGATATTCTAAGAGCAAGTTCTATCAAAAGATTTGGAAGGAAACCAAAACCTGTACGGAGAGATTCAATTAGCAGTGATCATGAGCATGCAATTCTTTTTGTAAATGGAAATCAATACTTTGGAGCCAAGGCAAACATAAATGTGTGGGCACCTCATGTAACAGATGGATATGAATTTAGCTTGTCCCAGATATGGGTTATTGCTGGCTCCTTTGGTAATGATCTGAATACTCTAGAAGCTGGTTGGCAGGTAAGTCCAGAACTGTATGGTGACAACTATCCAAGGTTCTTCACTTATTGGACTACAGATGCATATCAAACAACTGGATGCTACAACTTATTGTGTTCAGGCTTTATCCAAACTAACAACAAGATAGCAATAGGGGCAACAATCTCCCCTACATCAGCTTATAACCGTGGACAGTTTGATATTGGCATAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGTTAGAGTACGGAGGATTATTAGTTGGATACTGGCCAGCAAACATGTTTAGTCACTTAAGGAGTCATGCAAGCATGGTACAATTTGGTGGAGAGATTGTGAATGCTCGTTCTAAGGGTTACCACACCGACACTCAAATGGGAAGTGGCCATTTTGCAGAAGAAGGATTTAAAAAAGCAGCTTATTTTAGAAACTTACAAGTCATTGATTGGGACAATAACTTACTTCCTCTTGCTAATATTCATCACTTGGCTGATCATTCCAATTGTTATAACATTAAGCAGGGTAATAACAATGTTTGGGGAACTTATTTTTATTATGGAGGCCCTGGAAGAAATGTGAAATGCCCATGA
Protein sequence

>Msa0510980

MEAKEYSVSLKRHRKEPYCVAHHTKRQHHTASKQACTQNHSLILSTSQNTPPMLPVFVCLLLLLLTSTTPALSHSHHSIVSDSSHPLKTNQTYKAGSELLKLIRIRTHLKKINKPAVKTIQSPDGDLIDCVLSHQQPAFDHPKLKGHKPLDPPERPKGYYNNGEKVNEKFQLWTDSGEECPEGTVPIRRTTEDDILRASSIKRFGRKPKPVRRDSISSDHEHAILFVNGNQYFGAKANINVWAPHVTDGYEFSLSQIWVIAGSFGNDLNTLEAGWQVSPELYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNKIAIGATISPTSAYNRGQFDIGIMIWKDPKHGHWWLEYGGLLVGYWPANMFSHLRSHASMVQFGGEIVNARSKGYHTDTQMGSGHFAEEGFKKAAYFRNLQVIDWDNNLLPLANIHHLADHSNCYNIKQGNNNVWGTYFYYGGPGRNVKCP*