Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257730 | XP_024638892.1 | 99.543 | 219 | 1 | 0 | 1 | 219 | 1 | 219 | 1.02e-161 | 455 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257730 | sp|O22152|YAB1_ARATH | 61.009 | 218 | 74 | 6 | 10 | 219 | 15 | 229 | 2.27e-81 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257730 | G7JK46 | 99.087 | 219 | 1 | 1 | 1 | 219 | 1 | 218 | 2.47e-159 | 448 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1257730 | TF | C2C2-YABBY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1257730 | Msa1257770 | 0.830637 | 2.625513e-55 | -8.615850e-47 |
| Msa1257730 | Msa1329170 | 0.837596 | 4.735559e-57 | -8.615850e-47 |
| Msa1257730 | Msa1450530 | 0.838197 | 3.318801e-57 | -8.615850e-47 |
| Msa1129920 | Msa1257730 | 0.801642 | 8.177753e-49 | -8.615850e-47 |
| Msa1207830 | Msa1257730 | 0.826658 | 2.403595e-54 | -8.615850e-47 |
| Msa0537270 | Msa1257730 | 0.808569 | 2.903645e-50 | -8.615850e-47 |
| Msa0593710 | Msa1257730 | 0.805808 | 1.116548e-49 | -8.615850e-47 |
| Msa0601110 | Msa1257730 | 0.802272 | 6.070845e-49 | -8.615850e-47 |
| Msa0601120 | Msa1257730 | 0.800615 | 1.326296e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257730 | MtrunA17_Chr4g0056521 | 99.087 | 219 | 1 | 1 | 1 | 219 | 1 | 218 | 4.76e-163 | 448 |
| Msa1257730 | MtrunA17_Chr4g0011841 | 70.792 | 202 | 52 | 5 | 20 | 219 | 25 | 221 | 3.14e-90 | 264 |
| Msa1257730 | MtrunA17_Chr2g0322221 | 49.020 | 204 | 92 | 5 | 8 | 209 | 2 | 195 | 7.18e-57 | 179 |
| Msa1257730 | MtrunA17_Chr4g0063931 | 53.333 | 180 | 64 | 5 | 7 | 182 | 2 | 165 | 2.25e-55 | 175 |
| Msa1257730 | MtrunA17_Chr4g0025361 | 49.010 | 202 | 77 | 7 | 9 | 209 | 1 | 177 | 6.94e-50 | 160 |
| Msa1257730 | MtrunA17_Chr5g0413381 | 50.314 | 159 | 70 | 4 | 18 | 175 | 12 | 162 | 1.22e-46 | 152 |
| Msa1257730 | MtrunA17_Chr5g0419871 | 43.452 | 168 | 74 | 4 | 9 | 174 | 7 | 155 | 6.30e-34 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257730 | AT2G45190.1 | 61.009 | 218 | 74 | 6 | 10 | 219 | 15 | 229 | 2.30e-82 | 245 |
| Msa1257730 | AT4G00180.1 | 61.504 | 226 | 63 | 10 | 12 | 217 | 17 | 238 | 1.10e-73 | 223 |
| Msa1257730 | AT4G00180.2 | 60.190 | 211 | 60 | 10 | 27 | 217 | 1 | 207 | 2.48e-62 | 193 |
| Msa1257730 | AT2G26580.2 | 56.548 | 168 | 50 | 5 | 17 | 182 | 8 | 154 | 5.53e-57 | 178 |
| Msa1257730 | AT2G26580.1 | 56.548 | 168 | 50 | 5 | 17 | 182 | 8 | 154 | 5.53e-57 | 178 |
| Msa1257730 | AT1G08465.1 | 50.515 | 194 | 79 | 4 | 17 | 209 | 7 | 184 | 4.45e-55 | 174 |
| Msa1257730 | AT2G45190.2 | 57.143 | 168 | 61 | 6 | 60 | 219 | 1 | 165 | 3.81e-54 | 171 |
| Msa1257730 | AT1G23420.1 | 46.286 | 175 | 90 | 3 | 6 | 178 | 8 | 180 | 7.58e-39 | 134 |
| Msa1257730 | AT1G23420.2 | 46.286 | 175 | 90 | 3 | 6 | 178 | 39 | 211 | 4.41e-38 | 133 |
| Msa1257730 | AT1G69180.1 | 45.000 | 160 | 69 | 3 | 15 | 174 | 16 | 156 | 6.19e-34 | 120 |
Find 83 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATGGTTCATCATAAAATT+TGG | 0.162315 | 8_2:+58541236 | None:intergenic |
| AATCATTTGGTGCATTTATA+TGG | 0.220470 | 8_2:+58541219 | None:intergenic |
| TTATCACTAGGTAGCTCTTT+TGG | 0.238958 | 8_2:-58537934 | Msa1257730:three_prime_UTR |
| ATTAATAAATACTAATAAAC+AGG | 0.298902 | 8_2:+58542018 | None:intergenic |
| GGTAGTACTAAGGAAATTAA+AGG | 0.299349 | 8_2:+58537859 | None:intergenic |
| ATCCCCTAATCAGTTTCATT+TGG | 0.322009 | 8_2:-58541482 | Msa1257730:CDS |
| TATATATTCGGTTTGATGAT+TGG | 0.328788 | 8_2:+58541821 | None:intergenic |
| ATAAAATTTGGAGCTGGGTT+TGG | 0.340235 | 8_2:+58541248 | None:intergenic |
| GCTTCCCTGTGGGTTATATC+AGG | 0.345088 | 8_2:+58539117 | None:intergenic |
| AGAGGACGACATTATATATT+CGG | 0.359434 | 8_2:+58541809 | None:intergenic |
| TGTCCCAAATGAAACTGATT+AGG | 0.359612 | 8_2:+58541478 | None:intergenic |
| TCCCCTAATCAGTTTCATTT+GGG | 0.373691 | 8_2:-58541481 | Msa1257730:CDS |
| CCCAACTCATCATAACCTTC+TGG | 0.383916 | 8_2:-58541443 | Msa1257730:intron |
| GTCTTCTTCATAGTCTGATC+AGG | 0.388325 | 8_2:+58538245 | None:intergenic |
| ATAGAGATTGATGCATTAGT+AGG | 0.390762 | 8_2:+58538001 | None:intergenic |
| AAAAGGGTTCCGTGGCAATA+TGG | 0.396523 | 8_2:-58542044 | Msa1257730:five_prime_UTR |
| GTCCCAAATGAAACTGATTA+GGG | 0.402841 | 8_2:+58541479 | None:intergenic |
| CTGATTGATTGATAGATAGA+TGG | 0.429694 | 8_2:+58541856 | None:intergenic |
| CACTTCCCACACATTCACTT+TGG | 0.432093 | 8_2:-58538275 | Msa1257730:CDS |
| CCAGAAGGTTATGATGAGTT+GGG | 0.434472 | 8_2:+58541443 | None:intergenic |
| TTCCTTAGTACTACCGTAGC+TGG | 0.442078 | 8_2:-58537851 | Msa1257730:three_prime_UTR |
| TTCAACCACAACATTATCCT+TGG | 0.449974 | 8_2:-58541787 | Msa1257730:CDS |
| TAAACAAAGAGAGAAAGAAA+AGG | 0.467919 | 8_2:-58542061 | Msa1257730:five_prime_UTR |
| AAAGGAGGATCATACATTCT+TGG | 0.469847 | 8_2:+58539080 | None:intergenic |
| AGTAATGCACGCATGTTGAC+TGG | 0.472196 | 8_2:+58541511 | None:intergenic |
| TTCATCATAAAATTTGGAGC+TGG | 0.473136 | 8_2:+58541242 | None:intergenic |
| ACCAGAAGGTTATGATGAGT+TGG | 0.475336 | 8_2:+58541442 | None:intergenic |
| TAATGTTATGTTGATAATCA+AGG | 0.477535 | 8_2:-58537966 | Msa1257730:three_prime_UTR |
| GGAGGCATAGAGAAATCATT+TGG | 0.480020 | 8_2:+58541206 | None:intergenic |
| TCACGTCTGTTTATGATTGG+TGG | 0.480315 | 8_2:+58541152 | None:intergenic |
| TCATCATAAAATTTGGAGCT+GGG | 0.482099 | 8_2:+58541243 | None:intergenic |
| AAACAAAGAGAGAAAGAAAA+GGG | 0.485188 | 8_2:-58542060 | Msa1257730:five_prime_UTR |
| ATCTCACGTCTGTTTATGAT+TGG | 0.489279 | 8_2:+58541149 | None:intergenic |
| GATTATGTGTTGTGAAAGAA+AGG | 0.492989 | 8_2:+58541915 | None:intergenic |
| TGAGAGTGATATATATAAAG+AGG | 0.497587 | 8_2:+58541968 | None:intergenic |
| ATTCTTGGCAGCTGCGCTGA+AGG | 0.503305 | 8_2:+58539095 | None:intergenic |
| CAAAGTGAATGTGTGGGAAG+TGG | 0.524635 | 8_2:+58538276 | None:intergenic |
| CTGTTTATGATTGGTGGTCG+TGG | 0.531680 | 8_2:+58541158 | None:intergenic |
| AACCAGCTACGGTAGTACTA+AGG | 0.531999 | 8_2:+58537849 | None:intergenic |
| TGCGCTGAAGGCTTCCCTGT+GGG | 0.539083 | 8_2:+58539107 | None:intergenic |
| CAGATTCTGATGAAAGATGC+GGG | 0.541160 | 8_2:-58538056 | Msa1257730:CDS |
| AACAAAGTTGCTCGGAAGGA+GGG | 0.547749 | 8_2:+58541757 | None:intergenic |
| GGAAGGAGGGAGGTGGTCCA+AGG | 0.549892 | 8_2:+58541770 | None:intergenic |
| GAAGACAAATGTGTGCCAGC+AGG | 0.553012 | 8_2:-58538228 | Msa1257730:intron |
| CTGCGCTGAAGGCTTCCCTG+TGG | 0.555021 | 8_2:+58539106 | None:intergenic |
| GATGTTTCATACAGCAAGGA+TGG | 0.571365 | 8_2:+58541710 | None:intergenic |
| GAACTTGTAACTAGAAAGCA+AGG | 0.574964 | 8_2:+58537803 | None:intergenic |
| TAGAGATTGATGCATTAGTA+GGG | 0.577948 | 8_2:+58538002 | None:intergenic |
| GGATAATGTTGTGGTTGAAG+AGG | 0.579637 | 8_2:+58541791 | None:intergenic |
| GTCTTGAACAAGCTTGTGCA+AGG | 0.580384 | 8_2:+58541571 | None:intergenic |
| TAACAAAGTTGCTCGGAAGG+AGG | 0.582448 | 8_2:+58541756 | None:intergenic |
| GTTGCTCGGAAGGAGGGAGG+TGG | 0.583306 | 8_2:+58541763 | None:intergenic |
| ATTAGATAAGTAACCAGCTA+CGG | 0.584275 | 8_2:+58537838 | None:intergenic |
| GATTGACAGACTTAATGCGT+TGG | 0.585391 | 8_2:+58539139 | None:intergenic |
| ACATAACAAAGTTGCTCGGA+AGG | 0.586092 | 8_2:+58541753 | None:intergenic |
| AAAGTGAATGTGTGGGAAGT+GGG | 0.594462 | 8_2:+58538277 | None:intergenic |
| CTCATCAGCTACAGTCCTAG+TGG | 0.598065 | 8_2:+58541184 | None:intergenic |
| AGCAAGGATGGTGTCACAGA+TGG | 0.603099 | 8_2:+58541722 | None:intergenic |
| TCAATCCTGATATAACCCAC+AGG | 0.603889 | 8_2:-58539122 | Msa1257730:CDS |
| TCATCAGCTACAGTCCTAGT+GGG | 0.606377 | 8_2:+58541185 | None:intergenic |
| ATTTCTCTATGCCTCCCACT+AGG | 0.608537 | 8_2:-58541199 | Msa1257730:CDS |
| ACAAGTTAACCACCACACCT+TGG | 0.608577 | 8_2:+58541879 | None:intergenic |
| AAAGCATATCCAAGGTGTGG+TGG | 0.610066 | 8_2:-58541888 | Msa1257730:five_prime_UTR |
| AAATGAAACTGATTAGGGGA+TGG | 0.614526 | 8_2:+58541484 | None:intergenic |
| TCAGATTCTGATGAAAGATG+CGG | 0.615278 | 8_2:-58538057 | Msa1257730:CDS |
| CAGAAGGTTATGATGAGTTG+GGG | 0.622147 | 8_2:+58541444 | None:intergenic |
| GTGGACATAACAAAGTTGCT+CGG | 0.624197 | 8_2:+58541749 | None:intergenic |
| AGAGAAAGAAAAGGGTTCCG+TGG | 0.624758 | 8_2:-58542052 | Msa1257730:five_prime_UTR |
| AACAGGGAACCATATTGCCA+CGG | 0.633774 | 8_2:+58542035 | None:intergenic |
| ATGAGACCAAAGTGAATGTG+TGG | 0.636661 | 8_2:+58538269 | None:intergenic |
| CAATCCTGATATAACCCACA+GGG | 0.644329 | 8_2:-58539121 | Msa1257730:CDS |
| AGGACTACTACATTATCACT+AGG | 0.658383 | 8_2:-58537946 | Msa1257730:three_prime_UTR |
| AAAGTTGCTCGGAAGGAGGG+AGG | 0.666622 | 8_2:+58541760 | None:intergenic |
| ATGAAGCGATTGTATGCTGA+GGG | 0.673566 | 8_2:+58539308 | None:intergenic |
| TCAGCTACAGTCCTAGTGGG+AGG | 0.678197 | 8_2:+58541188 | None:intergenic |
| TGGTGTCACAGATGGTGCAG+TGG | 0.683501 | 8_2:+58541730 | None:intergenic |
| ATGACCGCATCTCACAGTAA+CGG | 0.691204 | 8_2:+58541549 | None:intergenic |
| AAGACCGTTACTGTGAGATG+CGG | 0.703867 | 8_2:-58541553 | Msa1257730:CDS |
| TTAATAAATACTAATAAACA+GGG | 0.705570 | 8_2:+58542019 | None:intergenic |
| TGAGACCAAAGTGAATGTGT+GGG | 0.708380 | 8_2:+58538270 | None:intergenic |
| GTGGTCCAAGGATAATGTTG+TGG | 0.713676 | 8_2:+58541782 | None:intergenic |
| TCCCAAATGAAACTGATTAG+GGG | 0.717673 | 8_2:+58541480 | None:intergenic |
| GATGAAGCGATTGTATGCTG+AGG | 0.735800 | 8_2:+58539307 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAAAAAAAAAAAAA+GGG | + | chr8_2:58539486-58539505 | None:intergenic | 0.0% |
| !! | TATTTAAAAAAAAAAAAAAA+AGG | + | chr8_2:58539487-58539506 | None:intergenic | 0.0% |
| !! | TAAATAAATAAATAAAAATA+TGG | - | chr8_2:58541278-58541297 | Msa1257730:intron | 0.0% |
| !! | TTAATAAATACTAATAAACA+GGG | + | chr8_2:58537865-58537884 | None:intergenic | 10.0% |
| !! | ATTAATAAATACTAATAAAC+AGG | + | chr8_2:58537866-58537885 | None:intergenic | 10.0% |
| !! | AGTTCAAATTAATAAATTAT+GGG | - | chr8_2:58538883-58538902 | Msa1257730:intron | 10.0% |
| !! | AAAAAAAAATTTACTTTATG+TGG | - | chr8_2:58538983-58539002 | Msa1257730:intron | 10.0% |
| !!! | GAAATTATTTATTGATTTTA+GGG | - | chr8_2:58539240-58539259 | Msa1257730:intron | 10.0% |
| !! | TATATATTATATATGTAAGA+TGG | - | chr8_2:58539390-58539409 | Msa1257730:intron | 10.0% |
| !! | ATATATTATATATGTAAGAT+GGG | - | chr8_2:58539391-58539410 | Msa1257730:intron | 10.0% |
| !! | ATTCATTTATTTATAAGTTA+AGG | + | chr8_2:58540830-58540849 | None:intergenic | 10.0% |
| !!! | ATATTGATTAAATAAAGTTA+AGG | - | chr8_2:58541137-58541156 | Msa1257730:intron | 10.0% |
| !! | ATGTAAATATCTATAAAAAA+AGG | - | chr8_2:58541429-58541448 | Msa1257730:intron | 10.0% |
| !! | GTTATATTTGCATAAAAAAA+TGG | + | chr8_2:58538257-58538276 | None:intergenic | 15.0% |
| !! | TTAATGTATGGTATATAAAA+TGG | + | chr8_2:58538534-58538553 | None:intergenic | 15.0% |
| !! | GAGTTCAAATTAATAAATTA+TGG | - | chr8_2:58538882-58538901 | Msa1257730:intron | 15.0% |
| !!! | GGAAATTATTTATTGATTTT+AGG | - | chr8_2:58539239-58539258 | Msa1257730:intron | 15.0% |
| !! | TATATTATATATGTAAGATG+GGG | - | chr8_2:58539392-58539411 | Msa1257730:intron | 15.0% |
| !! | TCAACAATTAATGATATATA+TGG | - | chr8_2:58539554-58539573 | Msa1257730:intron | 15.0% |
| !! | AACAGATTAATTAAATTGAA+AGG | - | chr8_2:58540443-58540462 | Msa1257730:intron | 15.0% |
| !!! | GATTTTGATATATATGATAA+CGG | - | chr8_2:58540512-58540531 | Msa1257730:intron | 15.0% |
| !!! | GTTAAAAAAAAAAAGTACAA+TGG | + | chr8_2:58540620-58540639 | None:intergenic | 15.0% |
| !! | AAAAAAAAATTAAGGAGAAA+AGG | - | chr8_2:58541048-58541067 | Msa1257730:intron | 15.0% |
| !! | CATAAAATTAATCAAGATTA+AGG | + | chr8_2:58541243-58541262 | None:intergenic | 15.0% |
| !!! | TAGATATTTACATGTTTTAT+AGG | + | chr8_2:58541422-58541441 | None:intergenic | 15.0% |
| !!! | ATTCCTTCATTTTTTTTTTC+AGG | - | chr8_2:58538279-58538298 | Msa1257730:CDS | 20.0% |
| !! | GATGTAAAGTAATTAATGTA+TGG | + | chr8_2:58538546-58538565 | None:intergenic | 20.0% |
| !! | ATATGGTTCATCATAAAATT+TGG | + | chr8_2:58538648-58538667 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTGAGTAACTT+AGG | - | chr8_2:58538768-58538787 | Msa1257730:intron | 20.0% |
| !!! | TGATCTTCTAAAATATTGTT+CGG | - | chr8_2:58538834-58538853 | Msa1257730:intron | 20.0% |
| !!! | TAGAGACAATATATCTTTTA+GGG | + | chr8_2:58539141-58539160 | None:intergenic | 20.0% |
| !!! | ATAGAGACAATATATCTTTT+AGG | + | chr8_2:58539142-58539161 | None:intergenic | 20.0% |
| !! | TTCTATGATAAGCTAAATTA+AGG | + | chr8_2:58539205-58539224 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAAATACACTCTC+CGG | - | chr8_2:58539494-58539513 | Msa1257730:intron | 20.0% |
| !! | AGTAACCTATGTAATAAAAT+GGG | - | chr8_2:58540046-58540065 | Msa1257730:intron | 20.0% |
| !! | TTTCTATATAAGTTACAAGA+CGG | + | chr8_2:58540090-58540109 | None:intergenic | 20.0% |
| !! | AATAATACCTCATGAAAAAA+AGG | - | chr8_2:58540419-58540438 | Msa1257730:intron | 20.0% |
| !!! | CTGTTATATTTTCATATAGT+TGG | + | chr8_2:58540487-58540506 | None:intergenic | 20.0% |
| !! | CAACTATATGAAAATATAAC+AGG | - | chr8_2:58540485-58540504 | Msa1257730:intron | 20.0% |
| !! | ATGTGAAGTAAATCTAAATA+CGG | - | chr8_2:58540699-58540718 | Msa1257730:intron | 20.0% |
| !! | ATTTATAAGTTAAGGAGAAA+AGG | + | chr8_2:58540822-58540841 | None:intergenic | 20.0% |
| !! | TAAAATTAATAACCCTAACT+TGG | - | chr8_2:58540883-58540902 | Msa1257730:intron | 20.0% |
| !! | AAAATTAATAACCCTAACTT+GGG | - | chr8_2:58540884-58540903 | Msa1257730:intron | 20.0% |
| !! | ACCTCTCAAAAAAAAAATTA+AGG | - | chr8_2:58541040-58541059 | Msa1257730:intron | 20.0% |
| !!! | TCCTTAATTTTTTTTTTGAG+AGG | + | chr8_2:58541044-58541063 | None:intergenic | 20.0% |
| !! | TAAATAAAGTTAAGGAGAAA+AGG | - | chr8_2:58541145-58541164 | Msa1257730:intron | 20.0% |
| !! | TAATCAAGATTAAGGATAAA+AGG | + | chr8_2:58541235-58541254 | None:intergenic | 20.0% |
| !!! | AATCATGGACTAAAAAAAAT+TGG | + | chr8_2:58541480-58541499 | None:intergenic | 20.0% |
| !! | ACAATTCAAAATGAATGATA+TGG | - | chr8_2:58541521-58541540 | Msa1257730:CDS | 20.0% |
| !!! | TAATGTTATGTTGATAATCA+AGG | - | chr8_2:58541915-58541934 | Msa1257730:five_prime_UTR | 20.0% |
| ! | TAAACAAAGAGAGAAAGAAA+AGG | - | chr8_2:58537820-58537839 | Msa1257730:three_prime_UTR | 25.0% |
| ! | AAACAAAGAGAGAAAGAAAA+GGG | - | chr8_2:58537821-58537840 | Msa1257730:three_prime_UTR | 25.0% |
| ! | TGAGAGTGATATATATAAAG+AGG | + | chr8_2:58537916-58537935 | None:intergenic | 25.0% |
| !! | AATCAAAAAAAGCATATCCA+AGG | - | chr8_2:58537985-58538004 | Msa1257730:three_prime_UTR | 25.0% |
| !! | TATATATTCGGTTTGATGAT+TGG | + | chr8_2:58538063-58538082 | None:intergenic | 25.0% |
| ! | TCACCTGAAAAAAAAAATGA+AGG | + | chr8_2:58538285-58538304 | None:intergenic | 25.0% |
| !! | AAAAAGAAAGTATAACCAGA+AGG | + | chr8_2:58538456-58538475 | None:intergenic | 25.0% |
| ! | TAAGAGTAGAAAAGATAAGA+GGG | + | chr8_2:58538480-58538499 | None:intergenic | 25.0% |
| ! | TTAAGAGTAGAAAAGATAAG+AGG | + | chr8_2:58538481-58538500 | None:intergenic | 25.0% |
| !! | TCTAAGTAGTATAACTTTTG+AGG | - | chr8_2:58538571-58538590 | Msa1257730:intron | 25.0% |
| !!! | AATCATTTGGTGCATTTATA+TGG | + | chr8_2:58538665-58538684 | None:intergenic | 25.0% |
| ! | TTAAAGTAAGGAATGGTTTA+AGG | + | chr8_2:58539108-58539127 | None:intergenic | 25.0% |
| !! | TGTCCTTTTTGTTAATTTCT+CGG | - | chr8_2:58539302-58539321 | Msa1257730:intron | 25.0% |
| ! | TAAGCAAAAGTTTACACTTT+AGG | - | chr8_2:58539526-58539545 | Msa1257730:intron | 25.0% |
| !! | ATATATATGGTCTTTGTTGT+AGG | - | chr8_2:58539567-58539586 | Msa1257730:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr8_2:58539628-58539647 | Msa1257730:intron | 25.0% |
| ! | ATTGCAATTTAAGAGAGAAA+GGG | + | chr8_2:58539748-58539767 | None:intergenic | 25.0% |
| !! | AAATTTGAAATTGAGAGAGA+TGG | + | chr8_2:58539790-58539809 | None:intergenic | 25.0% |
| !! | CATTCAACTTAGCAAATTTT+GGG | + | chr8_2:58539880-58539899 | None:intergenic | 25.0% |
| !!! | CAAAATTTGCTAAGTTGAAT+GGG | - | chr8_2:58539879-58539898 | Msa1257730:intron | 25.0% |
| ! | CTTCAAAAGTTTATAAACCA+TGG | + | chr8_2:58539957-58539976 | None:intergenic | 25.0% |
| !!! | GGTTTATAAACTTTTGAAGT+TGG | - | chr8_2:58539958-58539977 | Msa1257730:intron | 25.0% |
| ! | GAGTAACCTATGTAATAAAA+TGG | - | chr8_2:58540045-58540064 | Msa1257730:intron | 25.0% |
| ! | TCAGTAATAAGTATCAACTA+AGG | - | chr8_2:58540376-58540395 | Msa1257730:intron | 25.0% |
| !!! | CAAATTTTAGTTGAAGTTGA+TGG | - | chr8_2:58540954-58540973 | Msa1257730:intron | 25.0% |
| !! | ATTAAGGATAAAAGGTACAA+TGG | + | chr8_2:58541227-58541246 | None:intergenic | 25.0% |
| !!! | AATCAATTTTTTTTTCTCCG+AGG | - | chr8_2:58541319-58541338 | Msa1257730:intron | 25.0% |
| !! | GACATTTTTCACAAAGAAAA+AGG | - | chr8_2:58541383-58541402 | Msa1257730:intron | 25.0% |
| !! | CATTTTGAATTGTTGAAACA+GGG | + | chr8_2:58541514-58541533 | None:intergenic | 25.0% |
| !! | TCATTTTGAATTGTTGAAAC+AGG | + | chr8_2:58541515-58541534 | None:intergenic | 25.0% |
| !!! | TATGGTTTTCTAGTTCATTT+TGG | - | chr8_2:58541539-58541558 | Msa1257730:CDS | 25.0% |
| ! | AAAGTATGTCACATATCAAA+AGG | + | chr8_2:58541569-58541588 | None:intergenic | 25.0% |
| ! | CAGAAATGAAAAAAAGTCAT+GGG | + | chr8_2:58541756-58541775 | None:intergenic | 25.0% |
| ! | TCAGAAATGAAAAAAAGTCA+TGG | + | chr8_2:58541757-58541776 | None:intergenic | 25.0% |
| GATTATGTGTTGTGAAAGAA+AGG | + | chr8_2:58537969-58537988 | None:intergenic | 30.0% | |
| CTGATTGATTGATAGATAGA+TGG | + | chr8_2:58538028-58538047 | None:intergenic | 30.0% | |
| AGAGGACGACATTATATATT+CGG | + | chr8_2:58538075-58538094 | None:intergenic | 30.0% | |
| ! | TCATCATAAAATTTGGAGCT+GGG | + | chr8_2:58538641-58538660 | None:intergenic | 30.0% |
| ! | TTCATCATAAAATTTGGAGC+TGG | + | chr8_2:58538642-58538661 | None:intergenic | 30.0% |
| !!! | AAAACCATCGTTTTGATTGA+GGG | + | chr8_2:58538797-58538816 | None:intergenic | 30.0% |
| !!! | AAAAACCATCGTTTTGATTG+AGG | + | chr8_2:58538798-58538817 | None:intergenic | 30.0% |
| ! | TTTATGTGGTTGCTATTGAT+TGG | - | chr8_2:58538997-58539016 | Msa1257730:intron | 30.0% |
| ! | TTCCACTTTCTTTTGGTAAA+AGG | - | chr8_2:58539049-58539068 | Msa1257730:intron | 30.0% |
| ! | TTCCTTTTACCAAAAGAAAG+TGG | + | chr8_2:58539054-58539073 | None:intergenic | 30.0% |
| ! | ACTTTCTTTTGGTAAAAGGA+AGG | - | chr8_2:58539053-58539072 | Msa1257730:intron | 30.0% |
| ! | AAAAGGAAGGAAGTCTTTTA+TGG | - | chr8_2:58539066-58539085 | Msa1257730:intron | 30.0% |
| TTGTCTCTATAAGTAATGAC+AGG | - | chr8_2:58539152-58539171 | Msa1257730:intron | 30.0% | |
| CATAGAACAGTTTGTAATAC+TGG | - | chr8_2:58539218-58539237 | Msa1257730:intron | 30.0% | |
| GTACCGAGAAATTAACAAAA+AGG | + | chr8_2:58539308-58539327 | None:intergenic | 30.0% | |
| ATAGAGATGAAAGCAAACTT+AGG | - | chr8_2:58539340-58539359 | Msa1257730:intron | 30.0% | |
| ! | CTTTTGCTTATAATAGTGAC+CGG | + | chr8_2:58539516-58539535 | None:intergenic | 30.0% |
| !! | CTTTTGTTTAATATACCCTC+CGG | + | chr8_2:58539650-58539669 | None:intergenic | 30.0% |
| TTGCAATTTAAGAGAGAAAG+GGG | + | chr8_2:58539747-58539766 | None:intergenic | 30.0% | |
| GATTGCAATTTAAGAGAGAA+AGG | + | chr8_2:58539749-58539768 | None:intergenic | 30.0% | |
| ! | CCATTCAACTTAGCAAATTT+TGG | + | chr8_2:58539881-58539900 | None:intergenic | 30.0% |
| !! | CCAAAATTTGCTAAGTTGAA+TGG | - | chr8_2:58539878-58539897 | Msa1257730:intron | 30.0% |
| ! | CATCACCCATTTTATTACAT+AGG | + | chr8_2:58540054-58540073 | None:intergenic | 30.0% |
| GTAATAAAATGGGTGATGAA+TGG | - | chr8_2:58540056-58540075 | Msa1257730:intron | 30.0% | |
| !! | TTTAGCTCATTTTCAACAGA+TGG | - | chr8_2:58540144-58540163 | Msa1257730:intron | 30.0% |
| ATCCAGACTTTAATTATACG+TGG | + | chr8_2:58540276-58540295 | None:intergenic | 30.0% | |
| ! | TGGTGGATAGAAAAAAGATA+GGG | - | chr8_2:58540306-58540325 | Msa1257730:intron | 30.0% |
| TTTAAACAACTACTATTCCG+GGG | + | chr8_2:58540345-58540364 | None:intergenic | 30.0% | |
| CTTTAAACAACTACTATTCC+GGG | + | chr8_2:58540346-58540365 | None:intergenic | 30.0% | |
| ! | GCTTTAAACAACTACTATTC+CGG | + | chr8_2:58540347-58540366 | None:intergenic | 30.0% |
| !!! | TCTGTTACCTTTTTTTCATG+AGG | + | chr8_2:58540429-58540448 | None:intergenic | 30.0% |
| TATAAGTTAAGGAGAAAAGG+AGG | + | chr8_2:58540819-58540838 | None:intergenic | 30.0% | |
| !! | AACATTTTTCAGCGAGAATA+GGG | + | chr8_2:58541703-58541722 | None:intergenic | 30.0% |
| !! | AAACATTTTTCAGCGAGAAT+AGG | + | chr8_2:58541704-58541723 | None:intergenic | 30.0% |
| TGTATCATTCTTCTTTATCC+AGG | - | chr8_2:58541791-58541810 | Msa1257730:CDS | 30.0% | |
| ! | TTTTATGCTTCTGCTAATCT+TGG | - | chr8_2:58541849-58541868 | Msa1257730:five_prime_UTR | 30.0% |
| TAGAGATTGATGCATTAGTA+GGG | + | chr8_2:58541882-58541901 | None:intergenic | 30.0% | |
| ATAGAGATTGATGCATTAGT+AGG | + | chr8_2:58541883-58541902 | None:intergenic | 30.0% | |
| GGTAGTACTAAGGAAATTAA+AGG | + | chr8_2:58542025-58542044 | None:intergenic | 30.0% | |
| ATTAGATAAGTAACCAGCTA+CGG | + | chr8_2:58542046-58542065 | None:intergenic | 30.0% | |
| ! | AAAAAAGCATATCCAAGGTG+TGG | - | chr8_2:58537990-58538009 | Msa1257730:three_prime_UTR | 35.0% |
| TTCAACCACAACATTATCCT+TGG | - | chr8_2:58538094-58538113 | Msa1257730:intron | 35.0% | |
| TAGTGATGTTTCATACAGCA+AGG | + | chr8_2:58538178-58538197 | None:intergenic | 35.0% | |
| ! | TAAGCTAGTGTTGAAAAGTG+GGG | + | chr8_2:58538217-58538236 | None:intergenic | 35.0% |
| ! | CTAAGCTAGTGTTGAAAAGT+GGG | + | chr8_2:58538218-58538237 | None:intergenic | 35.0% |
| !! | TTTTCAACACTAGCTTAGCT+AGG | - | chr8_2:58538220-58538239 | Msa1257730:intron | 35.0% |
| ! | TTTCAACACTAGCTTAGCTA+GGG | - | chr8_2:58538221-58538240 | Msa1257730:intron | 35.0% |
| AAATGAAACTGATTAGGGGA+TGG | + | chr8_2:58538400-58538419 | None:intergenic | 35.0% | |
| ATCCCCTAATCAGTTTCATT+TGG | - | chr8_2:58538399-58538418 | Msa1257730:intron | 35.0% | |
| TCCCCTAATCAGTTTCATTT+GGG | - | chr8_2:58538400-58538419 | Msa1257730:intron | 35.0% | |
| TCCCAAATGAAACTGATTAG+GGG | + | chr8_2:58538404-58538423 | None:intergenic | 35.0% | |
| GTCCCAAATGAAACTGATTA+GGG | + | chr8_2:58538405-58538424 | None:intergenic | 35.0% | |
| TGTCCCAAATGAAACTGATT+AGG | + | chr8_2:58538406-58538425 | None:intergenic | 35.0% | |
| ! | CATTTTTCTTTTCTTGCAGC+AGG | - | chr8_2:58538602-58538621 | Msa1257730:intron | 35.0% |
| ! | ATAAAATTTGGAGCTGGGTT+TGG | + | chr8_2:58538636-58538655 | None:intergenic | 35.0% |
| ATCTCACGTCTGTTTATGAT+TGG | + | chr8_2:58538735-58538754 | None:intergenic | 35.0% | |
| !! | CTTCTAAAATATTGTTCGGC+TGG | - | chr8_2:58538838-58538857 | Msa1257730:intron | 35.0% |
| !! | GCACACTTTAAAGTAAGGAA+TGG | + | chr8_2:58539115-58539134 | None:intergenic | 35.0% |
| TTGCTTTCATCTCTATATGC+TGG | + | chr8_2:58539336-58539355 | None:intergenic | 35.0% | |
| TGTAAGATGGGGAAAATATG+TGG | - | chr8_2:58539403-58539422 | Msa1257730:intron | 35.0% | |
| ! | AAAAAAAGGGGAAAAGCATG+TGG | + | chr8_2:58539473-58539492 | None:intergenic | 35.0% |
| AGAACTTTGTGCAAAACTTG+TGG | - | chr8_2:58539907-58539926 | Msa1257730:intron | 35.0% | |
| ! | CTCATTTTCAACAGATGGAT+AGG | - | chr8_2:58540149-58540168 | Msa1257730:intron | 35.0% |
| CTCCACGTATAATTAAAGTC+TGG | - | chr8_2:58540271-58540290 | Msa1257730:intron | 35.0% | |
| !! | GTGGTGGATAGAAAAAAGAT+AGG | - | chr8_2:58540305-58540324 | Msa1257730:intron | 35.0% |
| TTAAACAACTACTATTCCGG+GGG | + | chr8_2:58540344-58540363 | None:intergenic | 35.0% | |
| AAAGGAGGATCATACATTCT+TGG | + | chr8_2:58540804-58540823 | None:intergenic | 35.0% | |
| ! | GGGTTCAAGATCTGAATTTT+CGG | - | chr8_2:58540904-58540923 | Msa1257730:intron | 35.0% |
| TGCTATGATAATTTACCTGC+TGG | + | chr8_2:58541671-58541690 | None:intergenic | 35.0% | |
| !! | ACATTTTTCAGCGAGAATAG+GGG | + | chr8_2:58541702-58541721 | None:intergenic | 35.0% |
| TCATTCTTCTTTATCCAGGA+AGG | - | chr8_2:58541795-58541814 | Msa1257730:CDS | 35.0% | |
| TCAGATTCTGATGAAAGATG+CGG | - | chr8_2:58541824-58541843 | Msa1257730:five_prime_UTR | 35.0% | |
| AGGACTACTACATTATCACT+AGG | - | chr8_2:58541935-58541954 | Msa1257730:five_prime_UTR | 35.0% | |
| ! | TTATCACTAGGTAGCTCTTT+TGG | - | chr8_2:58541947-58541966 | Msa1257730:five_prime_UTR | 35.0% |
| ! | TATCACTAGGTAGCTCTTTT+GGG | - | chr8_2:58541948-58541967 | Msa1257730:five_prime_UTR | 35.0% |
| GGATAATGTTGTGGTTGAAG+AGG | + | chr8_2:58538093-58538112 | None:intergenic | 40.0% | |
| ACATAACAAAGTTGCTCGGA+AGG | + | chr8_2:58538131-58538150 | None:intergenic | 40.0% | |
| GTGGACATAACAAAGTTGCT+CGG | + | chr8_2:58538135-58538154 | None:intergenic | 40.0% | |
| GATGTTTCATACAGCAAGGA+TGG | + | chr8_2:58538174-58538193 | None:intergenic | 40.0% | |
| ! | GCTAAGCTAGTGTTGAAAAG+TGG | + | chr8_2:58538219-58538238 | None:intergenic | 40.0% |
| CAGAAGGTTATGATGAGTTG+GGG | + | chr8_2:58538440-58538459 | None:intergenic | 40.0% | |
| CCAGAAGGTTATGATGAGTT+GGG | + | chr8_2:58538441-58538460 | None:intergenic | 40.0% | |
| ACCAGAAGGTTATGATGAGT+TGG | + | chr8_2:58538442-58538461 | None:intergenic | 40.0% | |
| ! | TTTTCTTTTCTTGCAGCAGG+AGG | - | chr8_2:58538605-58538624 | Msa1257730:intron | 40.0% |
| ! | GGAGGCATAGAGAAATCATT+TGG | + | chr8_2:58538678-58538697 | None:intergenic | 40.0% |
| TCACGTCTGTTTATGATTGG+TGG | + | chr8_2:58538732-58538751 | None:intergenic | 40.0% | |
| GTTTCCCTCAATCAAAACGA+TGG | - | chr8_2:58538790-58538809 | Msa1257730:intron | 40.0% | |
| ! | TTGATTGGACAGTGTTGTTG+AGG | - | chr8_2:58539012-58539031 | Msa1257730:intron | 40.0% |
| AGAAAGTGGAACAAGACCAA+GGG | + | chr8_2:58539040-58539059 | None:intergenic | 40.0% | |
| AAGAAAGTGGAACAAGACCA+AGG | + | chr8_2:58539041-58539060 | None:intergenic | 40.0% | |
| !!! | GGTCTTGTTCCACTTTCTTT+TGG | - | chr8_2:58539042-58539061 | Msa1257730:intron | 40.0% |
| !! | GGCATGCACACTTTAAAGTA+AGG | + | chr8_2:58539120-58539139 | None:intergenic | 40.0% |
| AAACAAAGCCTCGTGAAGAA+GGG | + | chr8_2:58539271-58539290 | None:intergenic | 40.0% | |
| AAAACAAAGCCTCGTGAAGA+AGG | + | chr8_2:58539272-58539291 | None:intergenic | 40.0% | |
| AAGATGGGGAAAATATGTGG+TGG | - | chr8_2:58539406-58539425 | Msa1257730:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_2:58539631-58539650 | Msa1257730:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_2:58539632-58539651 | Msa1257730:intron | 40.0% | |
| TTACGGTACAGGAAGGAAAT+TGG | + | chr8_2:58539715-58539734 | None:intergenic | 40.0% | |
| TGTTTAGTTACGGTACAGGA+AGG | + | chr8_2:58539722-58539741 | None:intergenic | 40.0% | |
| ATTGCTTACCTTAGAGTGAG+AGG | + | chr8_2:58539833-58539852 | None:intergenic | 40.0% | |
| !! | CTTAGCAAATTTTGGGTCAG+AGG | + | chr8_2:58539873-58539892 | None:intergenic | 40.0% |
| TAAGTGCAACACATTTGCCA+TGG | - | chr8_2:58539937-58539956 | Msa1257730:intron | 40.0% | |
| TTCAACAGATGGATAGGAGA+CGG | - | chr8_2:58540155-58540174 | Msa1257730:intron | 40.0% | |
| !!! | TTTTTTCTATCCACCACCAG+GGG | + | chr8_2:58540302-58540321 | None:intergenic | 40.0% |
| !!! | CTTTTTTCTATCCACCACCA+GGG | + | chr8_2:58540303-58540322 | None:intergenic | 40.0% |
| !!! | TCTTTTTTCTATCCACCACC+AGG | + | chr8_2:58540304-58540323 | None:intergenic | 40.0% |
| ATGAAGCGATTGTATGCTGA+GGG | + | chr8_2:58540576-58540595 | None:intergenic | 40.0% | |
| GATTGACAGACTTAATGCGT+TGG | + | chr8_2:58540745-58540764 | None:intergenic | 40.0% | |
| TCAATCCTGATATAACCCAC+AGG | - | chr8_2:58540759-58540778 | Msa1257730:intron | 40.0% | |
| CAATCCTGATATAACCCACA+GGG | - | chr8_2:58540760-58540779 | Msa1257730:intron | 40.0% | |
| CAGATCTTGAACCCAAGTTA+GGG | + | chr8_2:58540898-58540917 | None:intergenic | 40.0% | |
| TCAGATCTTGAACCCAAGTT+AGG | + | chr8_2:58540899-58540918 | None:intergenic | 40.0% | |
| !! | TTGAAGTTGATGGTTCTCCT+CGG | - | chr8_2:58540964-58540983 | Msa1257730:intron | 40.0% |
| AAGGAGAAAAGGATGCTCTT+TGG | - | chr8_2:58541059-58541078 | Msa1257730:intron | 40.0% | |
| TGAATTGTTGAAACAGGGCA+GGG | + | chr8_2:58541509-58541528 | None:intergenic | 40.0% | |
| TTGAATTGTTGAAACAGGGC+AGG | + | chr8_2:58541510-58541529 | None:intergenic | 40.0% | |
| ACATACTTTCTGTGTGACAG+TGG | - | chr8_2:58541580-58541599 | Msa1257730:CDS | 40.0% | |
| CATACTTTCTGTGTGACAGT+GGG | - | chr8_2:58541581-58541600 | Msa1257730:CDS | 40.0% | |
| AAAGTGAATGTGTGGGAAGT+GGG | + | chr8_2:58541607-58541626 | None:intergenic | 40.0% | |
| TGAGACCAAAGTGAATGTGT+GGG | + | chr8_2:58541614-58541633 | None:intergenic | 40.0% | |
| ATGAGACCAAAGTGAATGTG+TGG | + | chr8_2:58541615-58541634 | None:intergenic | 40.0% | |
| GTCTTCTTCATAGTCTGATC+AGG | + | chr8_2:58541639-58541658 | None:intergenic | 40.0% | |
| CAGATTCTGATGAAAGATGC+GGG | - | chr8_2:58541825-58541844 | Msa1257730:five_prime_UTR | 40.0% | |
| AGAGAAAGAAAAGGGTTCCG+TGG | - | chr8_2:58537829-58537848 | Msa1257730:three_prime_UTR | 45.0% | |
| AAAAGGGTTCCGTGGCAATA+TGG | - | chr8_2:58537837-58537856 | Msa1257730:three_prime_UTR | 45.0% | |
| AACAGGGAACCATATTGCCA+CGG | + | chr8_2:58537849-58537868 | None:intergenic | 45.0% | |
| AAAGCATATCCAAGGTGTGG+TGG | - | chr8_2:58537993-58538012 | Msa1257730:three_prime_UTR | 45.0% | |
| ACAAGTTAACCACCACACCT+TGG | + | chr8_2:58538005-58538024 | None:intergenic | 45.0% | |
| GTGGTCCAAGGATAATGTTG+TGG | + | chr8_2:58538102-58538121 | None:intergenic | 45.0% | |
| AACAAAGTTGCTCGGAAGGA+GGG | + | chr8_2:58538127-58538146 | None:intergenic | 45.0% | |
| TAACAAAGTTGCTCGGAAGG+AGG | + | chr8_2:58538128-58538147 | None:intergenic | 45.0% | |
| ! | CTAGTGTTGAAAAGTGGGGA+TGG | + | chr8_2:58538213-58538232 | None:intergenic | 45.0% |
| GTCTTGAACAAGCTTGTGCA+AGG | + | chr8_2:58538313-58538332 | None:intergenic | 45.0% | |
| AAGACCGTTACTGTGAGATG+CGG | - | chr8_2:58538328-58538347 | Msa1257730:intron | 45.0% | |
| ATGACCGCATCTCACAGTAA+CGG | + | chr8_2:58538335-58538354 | None:intergenic | 45.0% | |
| AGTAATGCACGCATGTTGAC+TGG | + | chr8_2:58538373-58538392 | None:intergenic | 45.0% | |
| CCCAACTCATCATAACCTTC+TGG | - | chr8_2:58538438-58538457 | Msa1257730:intron | 45.0% | |
| ATTTCTCTATGCCTCCCACT+AGG | - | chr8_2:58538682-58538701 | Msa1257730:intron | 45.0% | |
| TCATCAGCTACAGTCCTAGT+GGG | + | chr8_2:58538699-58538718 | None:intergenic | 45.0% | |
| ! | CTGTTTATGATTGGTGGTCG+TGG | + | chr8_2:58538726-58538745 | None:intergenic | 45.0% |
| !! | GGGAAAATATGTGGTGGACA+GGG | - | chr8_2:58539412-58539431 | Msa1257730:intron | 45.0% |
| !! | GGAAAATATGTGGTGGACAG+GGG | - | chr8_2:58539413-58539432 | Msa1257730:intron | 45.0% |
| GATGCATGTAGGAGCAATGT+GGG | - | chr8_2:58539438-58539457 | Msa1257730:intron | 45.0% | |
| ! | GAAAGGGGCGTGTTTAGTTA+CGG | + | chr8_2:58539732-58539751 | None:intergenic | 45.0% |
| AGAGGTGAGAGTTGAGAAGT+AGG | + | chr8_2:58539815-58539834 | None:intergenic | 45.0% | |
| AACTCTCACCTCTCACTCTA+AGG | - | chr8_2:58539822-58539841 | Msa1257730:intron | 45.0% | |
| TCAACACTTGCAGTTGCTAC+CGG | + | chr8_2:58539995-58540014 | None:intergenic | 45.0% | |
| ! | GGAACTCTCTGTCTTTTCTC+TGG | + | chr8_2:58540555-58540574 | None:intergenic | 45.0% |
| GATGAAGCGATTGTATGCTG+AGG | + | chr8_2:58540577-58540596 | None:intergenic | 45.0% | |
| TCTAAATACGGTCCATCTGC+AGG | - | chr8_2:58540711-58540730 | Msa1257730:intron | 45.0% | |
| CTAAATACGGTCCATCTGCA+GGG | - | chr8_2:58540712-58540731 | Msa1257730:intron | 45.0% | |
| TTCTCCGAGGTTTGCATACT+CGG | - | chr8_2:58541332-58541351 | Msa1257730:intron | 45.0% | |
| TAAGCCGAGTATGCAAACCT+CGG | + | chr8_2:58541339-58541358 | None:intergenic | 45.0% | |
| AGGGCAGGGAAATACAATCA+TGG | + | chr8_2:58541495-58541514 | None:intergenic | 45.0% | |
| CAAAGTGAATGTGTGGGAAG+TGG | + | chr8_2:58541608-58541627 | None:intergenic | 45.0% | |
| CACTTCCCACACATTCACTT+TGG | - | chr8_2:58541606-58541625 | Msa1257730:intron | 45.0% | |
| GAATCTGATCATCACCTTCC+TGG | + | chr8_2:58541812-58541831 | None:intergenic | 45.0% | |
| TTCCTTAGTACTACCGTAGC+TGG | - | chr8_2:58542030-58542049 | Msa1257730:five_prime_UTR | 45.0% | |
| AACCAGCTACGGTAGTACTA+AGG | + | chr8_2:58542035-58542054 | None:intergenic | 45.0% | |
| !! | TTTAAAAAAAAAAAAAAAAG+GGG | + | chr8_2:58539485-58539504 | None:intergenic | 5.0% |
| !! | AGCAAGGATGGTGTCACAGA+TGG | + | chr8_2:58538162-58538181 | None:intergenic | 50.0% |
| CTCATCAGCTACAGTCCTAG+TGG | + | chr8_2:58538700-58538719 | None:intergenic | 50.0% | |
| ! | CAGTGTTGTTGAGGTACCCT+TGG | - | chr8_2:58539021-58539040 | Msa1257730:intron | 50.0% |
| !! | GGGGAAAATATGTGGTGGAC+AGG | - | chr8_2:58539411-58539430 | Msa1257730:intron | 50.0% |
| !! | AAATATGTGGTGGACAGGGG+CGG | - | chr8_2:58539416-58539435 | Msa1257730:intron | 50.0% |
| GGATGCATGTAGGAGCAATG+TGG | - | chr8_2:58539437-58539456 | Msa1257730:intron | 50.0% | |
| GGCGTGTTTAGTTACGGTAC+AGG | + | chr8_2:58539726-58539745 | None:intergenic | 50.0% | |
| !! | AGGGTACTTTTCTTCTCCCC+CGG | - | chr8_2:58540325-58540344 | Msa1257730:intron | 50.0% |
| !!! | CTCTGTCTTTTCTCTGGAGC+TGG | + | chr8_2:58540549-58540568 | None:intergenic | 50.0% |
| ! | GCTTCCCTGTGGGTTATATC+AGG | + | chr8_2:58540767-58540786 | None:intergenic | 50.0% |
| GTGAGAGACACTCATTACCG+AGG | + | chr8_2:58540984-58541003 | None:intergenic | 50.0% | |
| GAAGACAAATGTGTGCCAGC+AGG | - | chr8_2:58541653-58541672 | Msa1257730:intron | 50.0% | |
| AAAGTTGCTCGGAAGGAGGG+AGG | + | chr8_2:58538124-58538143 | None:intergenic | 55.0% | |
| !! | TGGTGTCACAGATGGTGCAG+TGG | + | chr8_2:58538154-58538173 | None:intergenic | 55.0% |
| TCAGCTACAGTCCTAGTGGG+AGG | + | chr8_2:58538696-58538715 | None:intergenic | 55.0% | |
| GTCAGAGGTGAGAGTTGAGG+GGG | + | chr8_2:58539858-58539877 | None:intergenic | 55.0% | |
| GGTCAGAGGTGAGAGTTGAG+GGG | + | chr8_2:58539859-58539878 | None:intergenic | 55.0% | |
| GGGTCAGAGGTGAGAGTTGA+GGG | + | chr8_2:58539860-58539879 | None:intergenic | 55.0% | |
| TGGGTCAGAGGTGAGAGTTG+AGG | + | chr8_2:58539861-58539880 | None:intergenic | 55.0% | |
| !! | GAAGTTGGCTTTGCTCCTGC+CGG | - | chr8_2:58539973-58539992 | Msa1257730:intron | 55.0% |
| TTAAAGTCTGGATCCGCCCC+TGG | - | chr8_2:58540283-58540302 | Msa1257730:intron | 55.0% | |
| TTTCTATCCACCACCAGGGG+CGG | + | chr8_2:58540299-58540318 | None:intergenic | 55.0% | |
| TTGGATCTCGTCCCTGCAGA+TGG | + | chr8_2:58540726-58540745 | None:intergenic | 55.0% | |
| ATTCTTGGCAGCTGCGCTGA+AGG | + | chr8_2:58540789-58540808 | None:intergenic | 55.0% | |
| CACTTGCAGTTGCTACCGGC+AGG | + | chr8_2:58539991-58540010 | None:intergenic | 60.0% | |
| TGCGCTGAAGGCTTCCCTGT+GGG | + | chr8_2:58540777-58540796 | None:intergenic | 60.0% | |
| GGAAGGAGGGAGGTGGTCCA+AGG | + | chr8_2:58538114-58538133 | None:intergenic | 65.0% | |
| GTTGCTCGGAAGGAGGGAGG+TGG | + | chr8_2:58538121-58538140 | None:intergenic | 65.0% | |
| GGGCACAGCCCTTCTTCACG+AGG | - | chr8_2:58539260-58539279 | Msa1257730:intron | 65.0% | |
| GGACAGGGGCGGATGCATGT+AGG | - | chr8_2:58539427-58539446 | Msa1257730:intron | 65.0% | |
| AAGTCTGGATCCGCCCCTGG+TGG | - | chr8_2:58540286-58540305 | Msa1257730:intron | 65.0% | |
| CTGCGCTGAAGGCTTCCCTG+TGG | + | chr8_2:58540778-58540797 | None:intergenic | 65.0% | |
| TCTGGATCCGCCCCTGGTGG+TGG | - | chr8_2:58540289-58540308 | Msa1257730:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 58537808 | 58542095 | 58537808 | ID=Msa1257730;Name=Msa1257730 |
| chr8_2 | mRNA | 58537808 | 58542095 | 58537808 | ID=Msa1257730-mRNA-1;Parent=Msa1257730;Name=Msa1257730-mRNA-1;_AED=0.08;_eAED=0.08;_QI=275|1|1|1|1|1|7|208|219 |
| chr8_2 | exon | 58537808 | 58538090 | 58537808 | ID=Msa1257730-mRNA-1:exon:18155;Parent=Msa1257730-mRNA-1 |
| chr8_2 | exon | 58538229 | 58538303 | 58538229 | ID=Msa1257730-mRNA-1:exon:18154;Parent=Msa1257730-mRNA-1 |
| chr8_2 | exon | 58539095 | 58539170 | 58539095 | ID=Msa1257730-mRNA-1:exon:18153;Parent=Msa1257730-mRNA-1 |
| chr8_2 | exon | 58539305 | 58539353 | 58539305 | ID=Msa1257730-mRNA-1:exon:18152;Parent=Msa1257730-mRNA-1 |
| chr8_2 | exon | 58541156 | 58541282 | 58541156 | ID=Msa1257730-mRNA-1:exon:18151;Parent=Msa1257730-mRNA-1 |
| chr8_2 | exon | 58541444 | 58541602 | 58541444 | ID=Msa1257730-mRNA-1:exon:18150;Parent=Msa1257730-mRNA-1 |
| chr8_2 | exon | 58541722 | 58542095 | 58541722 | ID=Msa1257730-mRNA-1:exon:18149;Parent=Msa1257730-mRNA-1 |
| chr8_2 | five_prime_UTR | 58541821 | 58542095 | 58541821 | ID=Msa1257730-mRNA-1:five_prime_utr;Parent=Msa1257730-mRNA-1 |
| chr8_2 | CDS | 58541722 | 58541820 | 58541722 | ID=Msa1257730-mRNA-1:cds;Parent=Msa1257730-mRNA-1 |
| chr8_2 | CDS | 58541444 | 58541602 | 58541444 | ID=Msa1257730-mRNA-1:cds;Parent=Msa1257730-mRNA-1 |
| chr8_2 | CDS | 58541156 | 58541282 | 58541156 | ID=Msa1257730-mRNA-1:cds;Parent=Msa1257730-mRNA-1 |
| chr8_2 | CDS | 58539305 | 58539353 | 58539305 | ID=Msa1257730-mRNA-1:cds;Parent=Msa1257730-mRNA-1 |
| chr8_2 | CDS | 58539095 | 58539170 | 58539095 | ID=Msa1257730-mRNA-1:cds;Parent=Msa1257730-mRNA-1 |
| chr8_2 | CDS | 58538229 | 58538303 | 58538229 | ID=Msa1257730-mRNA-1:cds;Parent=Msa1257730-mRNA-1 |
| chr8_2 | CDS | 58538016 | 58538090 | 58538016 | ID=Msa1257730-mRNA-1:cds;Parent=Msa1257730-mRNA-1 |
| chr8_2 | three_prime_UTR | 58537808 | 58538015 | 58537808 | ID=Msa1257730-mRNA-1:three_prime_utr;Parent=Msa1257730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
