Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601110 | XP_024637633.1 | 97.647 | 170 | 4 | 0 | 73 | 242 | 1 | 170 | 1.09e-116 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601110 | I3SF91 | 97.647 | 170 | 4 | 0 | 73 | 242 | 1 | 170 | 5.19e-117 | 340 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0601110 | 0.825883 | 3.676205e-54 | -8.615850e-47 |
| Msa0004350 | Msa0601110 | 0.818870 | 1.564295e-52 | -8.615850e-47 |
| Msa0005050 | Msa0601110 | 0.815173 | 1.059010e-51 | -8.615850e-47 |
| Msa0006870 | Msa0601110 | 0.813514 | 2.463470e-51 | -8.615850e-47 |
| Msa0017120 | Msa0601110 | 0.808932 | 2.429330e-50 | -8.615850e-47 |
| Msa0018220 | Msa0601110 | 0.876906 | 9.618409e-69 | -8.615850e-47 |
| Msa0043940 | Msa0601110 | 0.805446 | 1.329786e-49 | -8.615850e-47 |
| Msa0052020 | Msa0601110 | 0.859505 | 3.947404e-63 | -8.615850e-47 |
| Msa0052460 | Msa0601110 | 0.864891 | 8.770895e-65 | -8.615850e-47 |
| Msa0053110 | Msa0601110 | 0.817108 | 3.912890e-52 | -8.615850e-47 |
| Msa0059960 | Msa0601110 | -0.826899 | 2.106045e-54 | -8.615850e-47 |
| Msa0065390 | Msa0601110 | 0.803035 | 4.223957e-49 | -8.615850e-47 |
| Msa0077410 | Msa0601110 | 0.848545 | 5.724850e-60 | -8.615850e-47 |
| Msa0079770 | Msa0601110 | 0.811069 | 8.418412e-51 | -8.615850e-47 |
| Msa0092710 | Msa0601110 | 0.811244 | 7.713365e-51 | -8.615850e-47 |
| Msa0092730 | Msa0601110 | 0.800380 | 1.480832e-48 | -8.615850e-47 |
| Msa0094420 | Msa0601110 | 0.823889 | 1.085959e-53 | -8.615850e-47 |
| Msa0097050 | Msa0601110 | 0.879259 | 1.441956e-69 | -8.615850e-47 |
| Msa0098440 | Msa0601110 | 0.810752 | 9.859192e-51 | -8.615850e-47 |
| Msa0100570 | Msa0601110 | 0.820077 | 8.298030e-53 | -8.615850e-47 |
| Msa0100860 | Msa0601110 | 0.817836 | 2.681486e-52 | -8.615850e-47 |
| Msa0102800 | Msa0601110 | 0.818852 | 1.578518e-52 | -8.615850e-47 |
| Msa0103780 | Msa0601110 | 0.800014 | 1.757597e-48 | -8.615850e-47 |
| Msa0110710 | Msa0601110 | 0.805083 | 1.584207e-49 | -8.615850e-47 |
| Msa0125280 | Msa0601110 | 0.816457 | 5.475866e-52 | -8.615850e-47 |
| Msa0134040 | Msa0601110 | 0.829388 | 5.293430e-55 | -8.615850e-47 |
| Msa0135980 | Msa0601110 | 0.814176 | 1.760539e-51 | -8.615850e-47 |
| Msa0139900 | Msa0601110 | 0.869825 | 2.315547e-66 | -8.615850e-47 |
| Msa0141670 | Msa0601110 | 0.820473 | 6.732472e-53 | -8.615850e-47 |
| Msa0146470 | Msa0601110 | 0.824781 | 6.701857e-54 | -8.615850e-47 |
| Msa0150210 | Msa0601110 | 0.806910 | 6.538626e-50 | -8.615850e-47 |
| Msa0157020 | Msa0601110 | 0.808787 | 2.608026e-50 | -8.615850e-47 |
| Msa0161100 | Msa0601110 | 0.812134 | 4.938948e-51 | -8.615850e-47 |
| Msa0181090 | Msa0601110 | 0.832727 | 8.014931e-56 | -8.615850e-47 |
| Msa0184070 | Msa0601110 | 0.836707 | 7.991954e-57 | -8.615850e-47 |
| Msa0207180 | Msa0601110 | 0.841689 | 4.079753e-58 | -8.615850e-47 |
| Msa0219190 | Msa0601110 | 0.800646 | 1.306894e-48 | -8.615850e-47 |
| Msa0219660 | Msa0601110 | 0.812641 | 3.826984e-51 | -8.615850e-47 |
| Msa0224690 | Msa0601110 | 0.825798 | 3.850423e-54 | -8.615850e-47 |
| Msa0230400 | Msa0601110 | 0.844359 | 7.936488e-59 | -8.615850e-47 |
| Msa0367370 | Msa0601110 | 0.804756 | 1.853739e-49 | -8.615850e-47 |
| Msa0370600 | Msa0601110 | 0.847879 | 8.743686e-60 | -8.615850e-47 |
| Msa0378340 | Msa0601110 | 0.821785 | 3.357208e-53 | -8.615850e-47 |
| Msa0380060 | Msa0601110 | 0.827906 | 1.207923e-54 | -8.615850e-47 |
| Msa0382290 | Msa0601110 | 0.828501 | 8.682461e-55 | -8.615850e-47 |
| Msa0382560 | Msa0601110 | 0.853403 | 2.445848e-61 | -8.615850e-47 |
| Msa0398590 | Msa0601110 | 0.831287 | 1.818235e-55 | -8.615850e-47 |
| Msa0408640 | Msa0601110 | 0.835284 | 1.835724e-56 | -8.615850e-47 |
| Msa0413930 | Msa0601110 | 0.804797 | 1.817935e-49 | -8.615850e-47 |
| Msa0417630 | Msa0601110 | 0.806946 | 6.424462e-50 | -8.615850e-47 |
| Msa0418200 | Msa0601110 | 0.842331 | 2.760526e-58 | -8.615850e-47 |
| Msa0418480 | Msa0601110 | 0.866096 | 3.660792e-65 | -8.615850e-47 |
| Msa0421790 | Msa0601110 | 0.820880 | 5.429143e-53 | -8.615850e-47 |
| Msa0427690 | Msa0601110 | 0.820886 | 5.410614e-53 | -8.615850e-47 |
| Msa0429270 | Msa0601110 | 0.839205 | 1.821287e-57 | -8.615850e-47 |
| Msa0431800 | Msa0601110 | 0.850042 | 2.192293e-60 | -8.615850e-47 |
| Msa0439780 | Msa0601110 | 0.805847 | 1.095688e-49 | -8.615850e-47 |
| Msa0457870 | Msa0601110 | 0.807553 | 4.777746e-50 | -8.615850e-47 |
| Msa0464540 | Msa0601110 | 0.849238 | 3.676914e-60 | -8.615850e-47 |
| Msa0465860 | Msa0601110 | 0.863512 | 2.362111e-64 | -8.615850e-47 |
| Msa0467890 | Msa0601110 | 0.806951 | 6.408470e-50 | -8.615850e-47 |
| Msa0257130 | Msa0601110 | 0.816806 | 4.572549e-52 | -8.615850e-47 |
| Msa0259720 | Msa0601110 | 0.805387 | 1.368145e-49 | -8.615850e-47 |
| Msa0260960 | Msa0601110 | 0.820323 | 7.287787e-53 | -8.615850e-47 |
| Msa0260970 | Msa0601110 | 0.845489 | 3.933003e-59 | -8.615850e-47 |
| Msa0264600 | Msa0601110 | 0.806731 | 7.133179e-50 | -8.615850e-47 |
| Msa0274780 | Msa0601110 | 0.844506 | 7.247519e-59 | -8.615850e-47 |
| Msa0290950 | Msa0601110 | 0.814498 | 1.494597e-51 | -8.615850e-47 |
| Msa0315480 | Msa0601110 | 0.858678 | 6.984555e-63 | -8.615850e-47 |
| Msa0331780 | Msa0601110 | 0.828090 | 1.090767e-54 | -8.615850e-47 |
| Msa0339990 | Msa0601110 | 0.809619 | 1.729918e-50 | -8.615850e-47 |
| Msa0344580 | Msa0601110 | 0.818796 | 1.625741e-52 | -8.615850e-47 |
| Msa0351510 | Msa0601110 | 0.850015 | 2.231587e-60 | -8.615850e-47 |
| Msa0358230 | Msa0601110 | 0.846116 | 2.657922e-59 | -8.615850e-47 |
| Msa0361250 | Msa0601110 | 0.801685 | 8.013116e-49 | -8.615850e-47 |
| Msa0361260 | Msa0601110 | 0.827719 | 1.339336e-54 | -8.615850e-47 |
| Msa0487560 | Msa0601110 | 0.803822 | 2.902036e-49 | -8.615850e-47 |
| Msa0487620 | Msa0601110 | 0.808728 | 2.685777e-50 | -8.615850e-47 |
| Msa0510230 | Msa0601110 | 0.877329 | 6.855759e-69 | -8.615850e-47 |
| Msa0517300 | Msa0601110 | 0.819153 | 1.348717e-52 | -8.615850e-47 |
| Msa0518520 | Msa0601110 | 0.823090 | 1.670387e-53 | -8.615850e-47 |
| Msa0519200 | Msa0601110 | 0.820131 | 8.063941e-53 | -8.615850e-47 |
| Msa0520730 | Msa0601110 | 0.802002 | 6.899150e-49 | -8.615850e-47 |
| Msa0524210 | Msa0601110 | 0.856646 | 2.795272e-62 | -8.615850e-47 |
| Msa0525240 | Msa0601110 | 0.839593 | 1.444447e-57 | -8.615850e-47 |
| Msa0528940 | Msa0601110 | 0.826731 | 2.309088e-54 | -8.615850e-47 |
| Msa0532840 | Msa0601110 | 0.804349 | 2.254045e-49 | -8.615850e-47 |
| Msa0537270 | Msa0601110 | 0.875692 | 2.521729e-68 | -8.615850e-47 |
| Msa0538570 | Msa0601110 | 0.873893 | 1.032812e-67 | -8.615850e-47 |
| Msa0543850 | Msa0601110 | 0.865740 | 4.743390e-65 | -8.615850e-47 |
| Msa0547050 | Msa0601110 | 0.838800 | 2.319120e-57 | -8.615850e-47 |
| Msa0554420 | Msa0601110 | 0.807378 | 5.203692e-50 | -8.615850e-47 |
| Msa0561510 | Msa0601110 | 0.846052 | 2.766657e-59 | -8.615850e-47 |
| Msa0565590 | Msa0601110 | 0.800156 | 1.644943e-48 | -8.615850e-47 |
| Msa0567290 | Msa0601110 | 0.818402 | 1.997364e-52 | -8.615850e-47 |
| Msa0575250 | Msa0601110 | 0.837592 | 4.744990e-57 | -8.615850e-47 |
| Msa0578320 | Msa0601110 | 0.800287 | 1.546964e-48 | -8.615850e-47 |
| Msa0578900 | Msa0601110 | 0.822159 | 2.750263e-53 | -8.615850e-47 |
| Msa0581340 | Msa0601110 | 0.816639 | 4.986187e-52 | -8.615850e-47 |
| Msa0593710 | Msa0601110 | 0.875753 | 2.402613e-68 | -8.615850e-47 |
| Msa0594390 | Msa0601110 | 0.874979 | 4.421161e-68 | -8.615850e-47 |
| Msa0599690 | Msa0601110 | 0.836211 | 1.068967e-56 | -8.615850e-47 |
| Msa0600390 | Msa0601110 | 0.819039 | 1.432033e-52 | -8.615850e-47 |
| Msa0601110 | Msa0601120 | 0.999450 | 1.255673e-312 | -8.615850e-47 |
| Msa0601110 | Msa0601780 | 0.800205 | 1.607774e-48 | -8.615850e-47 |
| Msa0601110 | Msa0603680 | 0.813205 | 2.879601e-51 | -8.615850e-47 |
| Msa0601110 | Msa0607480 | 0.809107 | 2.228124e-50 | -8.615850e-47 |
| Msa0601110 | Msa0610860 | 0.817351 | 3.449795e-52 | -8.615850e-47 |
| Msa0601110 | Msa0618170 | 0.807213 | 5.641820e-50 | -8.615850e-47 |
| Msa0601110 | Msa0619330 | 0.811985 | 5.323702e-51 | -8.615850e-47 |
| Msa0601110 | Msa0620270 | 0.829112 | 6.175301e-55 | -8.615850e-47 |
| Msa0601110 | Msa0621770 | 0.835390 | 1.725149e-56 | -8.615850e-47 |
| Msa0601110 | Msa0633750 | 0.841122 | 5.754257e-58 | -8.615850e-47 |
| Msa0601110 | Msa0634270 | 0.876899 | 9.672543e-69 | -8.615850e-47 |
| Msa0601110 | Msa0640390 | 0.822126 | 2.799176e-53 | -8.615850e-47 |
| Msa0601110 | Msa0640880 | 0.827602 | 1.429061e-54 | -8.615850e-47 |
| Msa0601110 | Msa0641620 | 0.981583 | 6.065316e-153 | -8.615850e-47 |
| Msa0601110 | Msa0642650 | 0.811814 | 5.798609e-51 | -8.615850e-47 |
| Msa0601110 | Msa0642910 | 0.804163 | 2.465198e-49 | -8.615850e-47 |
| Msa0601110 | Msa0645050 | 0.831656 | 1.475266e-55 | -8.615850e-47 |
| Msa0601110 | Msa0647750 | 0.802439 | 5.607644e-49 | -8.615850e-47 |
| Msa0601110 | Msa0648180 | 0.824317 | 8.620233e-54 | -8.615850e-47 |
| Msa0601110 | Msa0648270 | 0.811363 | 7.268575e-51 | -8.615850e-47 |
| Msa0601110 | Msa0656950 | 0.809501 | 1.834488e-50 | -8.615850e-47 |
| Msa0601110 | Msa0665910 | -0.801971 | 6.999373e-49 | -8.615850e-47 |
| Msa0601110 | Msa0667970 | 0.801400 | 9.166072e-49 | -8.615850e-47 |
| Msa0601110 | Msa0672110 | 0.824721 | 6.921703e-54 | -8.615850e-47 |
| Msa0601110 | Msa0678890 | 0.874486 | 6.504889e-68 | -8.615850e-47 |
| Msa0601110 | Msa0680150 | 0.891428 | 4.007137e-74 | -8.615850e-47 |
| Msa0601110 | Msa0681890 | 0.822208 | 2.678773e-53 | -8.615850e-47 |
| Msa0601110 | Msa0682400 | 0.821143 | 4.722160e-53 | -8.615850e-47 |
| Msa0601110 | Msa0683650 | 0.815785 | 7.735751e-52 | -8.615850e-47 |
| Msa0601110 | Msa0684530 | 0.803427 | 3.504486e-49 | -8.615850e-47 |
| Msa0601110 | Msa0688540 | 0.825383 | 4.829976e-54 | -8.615850e-47 |
| Msa0601110 | Msa0691160 | 0.843589 | 1.276846e-58 | -8.615850e-47 |
| Msa0601110 | Msa0700610 | 0.804345 | 2.258402e-49 | -8.615850e-47 |
| Msa0601110 | Msa0700850 | 0.804446 | 2.151854e-49 | -8.615850e-47 |
| Msa0601110 | Msa0700910 | 0.832872 | 7.376799e-56 | -8.615850e-47 |
| Msa0601110 | Msa0701960 | 0.814308 | 1.645924e-51 | -8.615850e-47 |
| Msa0601110 | Msa0703720 | 0.819219 | 1.302999e-52 | -8.615850e-47 |
| Msa0601110 | Msa0703760 | 0.824743 | 6.839612e-54 | -8.615850e-47 |
| Msa0601110 | Msa0709480 | 0.809614 | 1.734273e-50 | -8.615850e-47 |
| Msa0601110 | Msa0716790 | 0.830393 | 3.011575e-55 | -8.615850e-47 |
| Msa0601110 | Msa0720270 | 0.838019 | 3.687471e-57 | -8.615850e-47 |
| Msa0601110 | Msa0722940 | 0.884848 | 1.349728e-71 | -8.615850e-47 |
| Msa0601110 | Msa0723150 | 0.891361 | 4.259662e-74 | -8.615850e-47 |
| Msa0601110 | Msa0730180 | 0.809369 | 1.958005e-50 | -8.615850e-47 |
| Msa0601110 | Msa0738970 | 0.828100 | 1.084366e-54 | -8.615850e-47 |
| Msa0601110 | Msa0740420 | 0.813247 | 2.819464e-51 | -8.615850e-47 |
| Msa0601110 | Msa0747780 | 0.821547 | 3.809617e-53 | -8.615850e-47 |
| Msa0601110 | Msa0760840 | 0.817542 | 3.124886e-52 | -8.615850e-47 |
| Msa0601110 | Msa0760890 | 0.803705 | 3.067989e-49 | -8.615850e-47 |
| Msa0601110 | Msa0761580 | 0.823800 | 1.139733e-53 | -8.615850e-47 |
| Msa0601110 | Msa0790830 | 0.803841 | 2.875921e-49 | -8.615850e-47 |
| Msa0601110 | Msa0799210 | 0.829302 | 5.553883e-55 | -8.615850e-47 |
| Msa0601110 | Msa0802500 | 0.823517 | 1.327660e-53 | -8.615850e-47 |
| Msa0601110 | Msa0803130 | 0.851151 | 1.069339e-60 | -8.615850e-47 |
| Msa0601110 | Msa0804110 | 0.806455 | 8.157220e-50 | -8.615850e-47 |
| Msa0601110 | Msa0819470 | 0.835472 | 1.645580e-56 | -8.615850e-47 |
| Msa0601110 | Msa0820670 | 0.808202 | 3.476739e-50 | -8.615850e-47 |
| Msa0601110 | Msa0841490 | 0.848908 | 4.540256e-60 | -8.615850e-47 |
| Msa0601110 | Msa0843290 | 0.903703 | 2.637569e-79 | -8.615850e-47 |
| Msa0601110 | Msa0859390 | 0.826231 | 3.038057e-54 | -8.615850e-47 |
| Msa0601110 | Msa0867350 | 0.811420 | 7.065927e-51 | -8.615850e-47 |
| Msa0601110 | Msa0872310 | 0.819948 | 8.879882e-53 | -8.615850e-47 |
| Msa0601110 | Msa0873190 | 0.828466 | 8.849446e-55 | -8.615850e-47 |
| Msa0601110 | Msa0876690 | 0.804660 | 1.941940e-49 | -8.615850e-47 |
| Msa0601110 | Msa0886880 | 0.835048 | 2.105560e-56 | -8.615850e-47 |
| Msa0601110 | Msa0890250 | 0.804432 | 2.166900e-49 | -8.615850e-47 |
| Msa0601110 | Msa0905550 | 0.814561 | 1.447008e-51 | -8.615850e-47 |
| Msa0601110 | Msa0925160 | 0.801764 | 7.718967e-49 | -8.615850e-47 |
| Msa0601110 | Msa0930330 | 0.835809 | 1.351918e-56 | -8.615850e-47 |
| Msa0601110 | Msa0931480 | 0.878243 | 3.288713e-69 | -8.615850e-47 |
| Msa0601110 | Msa0937550 | 0.807333 | 5.321600e-50 | -8.615850e-47 |
| Msa0601110 | Msa0938430 | 0.806139 | 9.509913e-50 | -8.615850e-47 |
| Msa0601110 | Msa0941960 | 0.813206 | 2.878351e-51 | -8.615850e-47 |
| Msa0601110 | Msa0951460 | 0.852100 | 5.758886e-61 | -8.615850e-47 |
| Msa0601110 | Msa0951960 | 0.854530 | 1.158022e-61 | -8.615850e-47 |
| Msa0601110 | Msa0974750 | 0.841750 | 3.931702e-58 | -8.615850e-47 |
| Msa0601110 | Msa0975580 | 0.800129 | 1.666025e-48 | -8.615850e-47 |
| Msa0601110 | Msa0988030 | 0.817138 | 3.852357e-52 | -8.615850e-47 |
| Msa0601110 | Msa0990520 | 0.803209 | 3.888173e-49 | -8.615850e-47 |
| Msa0601110 | Msa1004500 | 0.859324 | 4.475771e-63 | -8.615850e-47 |
| Msa0601110 | Msa1004520 | 0.834625 | 2.690654e-56 | -8.615850e-47 |
| Msa0601110 | Msa1007350 | 0.801574 | 8.445553e-49 | -8.615850e-47 |
| Msa0601110 | Msa1009790 | 0.806448 | 8.185182e-50 | -8.615850e-47 |
| Msa0601110 | Msa1014270 | 0.859845 | 3.120059e-63 | -8.615850e-47 |
| Msa0601110 | Msa1022310 | 0.805087 | 1.580997e-49 | -8.615850e-47 |
| Msa0601110 | Msa1024140 | 0.813161 | 2.944387e-51 | -8.615850e-47 |
| Msa0601110 | Msa1027790 | 0.845664 | 3.527127e-59 | -8.615850e-47 |
| Msa0601110 | Msa1028460 | 0.815953 | 7.097418e-52 | -8.615850e-47 |
| Msa0601110 | Msa1041530 | 0.818368 | 2.033559e-52 | -8.615850e-47 |
| Msa0601110 | Msa1045880 | 0.839698 | 1.356119e-57 | -8.615850e-47 |
| Msa0601110 | Msa1045970 | 0.841946 | 3.489278e-58 | -8.615850e-47 |
| Msa0601110 | Msa1046870 | 0.864605 | 1.078152e-64 | -8.615850e-47 |
| Msa0601110 | Msa1055260 | 0.838450 | 2.855300e-57 | -8.615850e-47 |
| Msa0601110 | Msa1055280 | 0.839096 | 1.943989e-57 | -8.615850e-47 |
| Msa0601110 | Msa1061180 | 0.823967 | 1.041244e-53 | -8.615850e-47 |
| Msa0601110 | Msa1061500 | 0.816427 | 5.561395e-52 | -8.615850e-47 |
| Msa0601110 | Msa1072080 | 0.805085 | 1.582633e-49 | -8.615850e-47 |
| Msa0601110 | Msa1081570 | 0.814684 | 1.358780e-51 | -8.615850e-47 |
| Msa0601110 | Msa1097850 | 0.811484 | 6.842831e-51 | -8.615850e-47 |
| Msa0601110 | Msa1106560 | 0.836120 | 1.127370e-56 | -8.615850e-47 |
| Msa0601110 | Msa1106580 | 0.803167 | 3.966836e-49 | -8.615850e-47 |
| Msa0601110 | Msa1107970 | 0.823470 | 1.361481e-53 | -8.615850e-47 |
| Msa0601110 | Msa1112610 | 0.843083 | 1.742419e-58 | -8.615850e-47 |
| Msa0601110 | Msa1125780 | 0.808234 | 3.422661e-50 | -8.615850e-47 |
| Msa0601110 | Msa1125950 | 0.809179 | 2.150071e-50 | -8.615850e-47 |
| Msa0601110 | Msa1127140 | 0.819132 | 1.363372e-52 | -8.615850e-47 |
| Msa0601110 | Msa1129720 | 0.800629 | 1.317707e-48 | -8.615850e-47 |
| Msa0601110 | Msa1129920 | 0.830656 | 2.596606e-55 | -8.615850e-47 |
| Msa0601110 | Msa1129960 | 0.801024 | 1.094376e-48 | -8.615850e-47 |
| Msa0601110 | Msa1134400 | 0.850298 | 1.858221e-60 | -8.615850e-47 |
| Msa0601110 | Msa1148780 | 0.800794 | 1.219640e-48 | -8.615850e-47 |
| Msa0601110 | Msa1149760 | 0.800643 | 1.308789e-48 | -8.615850e-47 |
| Msa0601110 | Msa1151960 | 0.817088 | 3.952693e-52 | -8.615850e-47 |
| Msa0601110 | Msa1166400 | 0.805921 | 1.057015e-49 | -8.615850e-47 |
| Msa0601110 | Msa1171340 | 0.811690 | 6.172127e-51 | -8.615850e-47 |
| Msa0601110 | Msa1175750 | 0.806828 | 6.804172e-50 | -8.615850e-47 |
| Msa0601110 | Msa1176160 | 0.814361 | 1.602263e-51 | -8.615850e-47 |
| Msa0601110 | Msa1178160 | 0.815175 | 1.057568e-51 | -8.615850e-47 |
| Msa0601110 | Msa1180410 | 0.806939 | 6.448022e-50 | -8.615850e-47 |
| Msa0601110 | Msa1183390 | 0.805607 | 1.230299e-49 | -8.615850e-47 |
| Msa0601110 | Msa1186210 | 0.839488 | 1.537889e-57 | -8.615850e-47 |
| Msa0601110 | Msa1190910 | 0.809785 | 1.593376e-50 | -8.615850e-47 |
| Msa0601110 | Msa1197110 | 0.807287 | 5.441411e-50 | -8.615850e-47 |
| Msa0601110 | Msa1200920 | 0.828970 | 6.684467e-55 | -8.615850e-47 |
| Msa0601110 | Msa1201990 | 0.818314 | 2.090707e-52 | -8.615850e-47 |
| Msa0601110 | Msa1207830 | 0.833906 | 4.073869e-56 | -8.615850e-47 |
| Msa0601110 | Msa1208510 | 0.805414 | 1.350494e-49 | -8.615850e-47 |
| Msa0601110 | Msa1211090 | 0.802534 | 5.361327e-49 | -8.615850e-47 |
| Msa0601110 | Msa1214870 | 0.804894 | 1.734977e-49 | -8.615850e-47 |
| Msa0601110 | Msa1221260 | 0.814086 | 1.842492e-51 | -8.615850e-47 |
| Msa0601110 | Msa1227950 | 0.807536 | 4.818007e-50 | -8.615850e-47 |
| Msa0601110 | Msa1232010 | 0.817312 | 3.520621e-52 | -8.615850e-47 |
| Msa0601110 | Msa1232860 | 0.863927 | 1.754643e-64 | -8.615850e-47 |
| Msa0601110 | Msa1235890 | 0.810770 | 9.768805e-51 | -8.615850e-47 |
| Msa0601110 | Msa1237930 | 0.820503 | 6.628496e-53 | -8.615850e-47 |
| Msa0601110 | Msa1254770 | 0.825231 | 5.247766e-54 | -8.615850e-47 |
| Msa0601110 | Msa1254800 | 0.826385 | 2.792203e-54 | -8.615850e-47 |
| Msa0601110 | Msa1257730 | 0.802272 | 6.070845e-49 | -8.615850e-47 |
| Msa0601110 | Msa1257770 | 0.828445 | 8.953321e-55 | -8.615850e-47 |
| Msa0601110 | Msa1258810 | 0.846138 | 2.621142e-59 | -8.615850e-47 |
| Msa0601110 | Msa1261340 | 0.813104 | 3.030224e-51 | -8.615850e-47 |
| Msa0601110 | Msa1261360 | 0.825907 | 3.628178e-54 | -8.615850e-47 |
| Msa0601110 | Msa1261370 | 0.814562 | 1.446561e-51 | -8.615850e-47 |
| Msa0601110 | Msa1261400 | 0.831525 | 1.589081e-55 | -8.615850e-47 |
| Msa0601110 | Msa1271510 | 0.816400 | 5.639303e-52 | -8.615850e-47 |
| Msa0601110 | Msa1274740 | 0.833847 | 4.215332e-56 | -8.615850e-47 |
| Msa0601110 | Msa1275290 | 0.830874 | 2.296379e-55 | -8.615850e-47 |
| Msa0601110 | Msa1281720 | 0.830070 | 3.612092e-55 | -8.615850e-47 |
| Msa0601110 | Msa1302150 | 0.822996 | 1.756489e-53 | -8.615850e-47 |
| Msa0601110 | Msa1305750 | 0.808147 | 3.573252e-50 | -8.615850e-47 |
| Msa0601110 | Msa1306540 | 0.803276 | 3.766148e-49 | -8.615850e-47 |
| Msa0601110 | Msa1307190 | 0.809203 | 2.124520e-50 | -8.615850e-47 |
| Msa0601110 | Msa1307370 | 0.800665 | 1.295614e-48 | -8.615850e-47 |
| Msa0601110 | Msa1312730 | 0.845510 | 3.883873e-59 | -8.615850e-47 |
| Msa0601110 | Msa1313460 | 0.841874 | 3.646950e-58 | -8.615850e-47 |
| Msa0601110 | Msa1315980 | 0.814510 | 1.485296e-51 | -8.615850e-47 |
| Msa0601110 | Msa1321000 | 0.853854 | 1.814616e-61 | -8.615850e-47 |
| Msa0601110 | Msa1323060 | 0.807221 | 5.618072e-50 | -8.615850e-47 |
| Msa0601110 | Msa1329170 | 0.850005 | 2.245983e-60 | -8.615850e-47 |
| Msa0601110 | Msa1330240 | 0.835007 | 2.155113e-56 | -8.615850e-47 |
| Msa0601110 | Msa1341340 | 0.805553 | 1.262612e-49 | -8.615850e-47 |
| Msa0601110 | Msa1348400 | 0.807773 | 4.291982e-50 | -8.615850e-47 |
| Msa0601110 | Msa1350670 | 0.839481 | 1.544198e-57 | -8.615850e-47 |
| Msa0601110 | Msa1354040 | 0.828867 | 7.080274e-55 | -8.615850e-47 |
| Msa0601110 | Msa1355400 | 0.848953 | 4.411673e-60 | -8.615850e-47 |
| Msa0601110 | Msa1365020 | 0.856030 | 4.237525e-62 | -8.615850e-47 |
| Msa0601110 | Msa1367410 | 0.856257 | 3.634543e-62 | -8.615850e-47 |
| Msa0601110 | Msa1369860 | 0.811536 | 6.666625e-51 | -8.615850e-47 |
| Msa0601110 | Msa1375400 | 0.820398 | 7.006644e-53 | -8.615850e-47 |
| Msa0601110 | Msa1379980 | 0.800171 | 1.633072e-48 | -8.615850e-47 |
| Msa0601110 | Msa1382720 | 0.809404 | 1.924385e-50 | -8.615850e-47 |
| Msa0601110 | Msa1407710 | 0.825617 | 4.252000e-54 | -8.615850e-47 |
| Msa0601110 | Msa1417650 | 0.854835 | 9.443066e-62 | -8.615850e-47 |
| Msa0601110 | Msa1420060 | 0.838200 | 3.311365e-57 | -8.615850e-47 |
| Msa0601110 | Msa1421550 | 0.806637 | 7.466531e-50 | -8.615850e-47 |
| Msa0601110 | Msa1421810 | 0.861351 | 1.090225e-63 | -8.615850e-47 |
| Msa0601110 | Msa1427390 | 0.826007 | 3.435657e-54 | -8.615850e-47 |
| Msa0601110 | Msa1429830 | 0.847817 | 9.094578e-60 | -8.615850e-47 |
| Msa0601110 | Msa1434020 | 0.819851 | 9.345093e-53 | -8.615850e-47 |
| Msa0601110 | Msa1435040 | 0.829187 | 5.922725e-55 | -8.615850e-47 |
| Msa0601110 | Msa1435050 | 0.845350 | 4.291320e-59 | -8.615850e-47 |
| Msa0601110 | Msa1435670 | 0.851633 | 7.815248e-61 | -8.615850e-47 |
| Msa0601110 | Msa1437150 | 0.829925 | 3.918580e-55 | -8.615850e-47 |
| Msa0601110 | Msa1439120 | 0.806212 | 9.180057e-50 | -8.615850e-47 |
| Msa0601110 | Msa1439670 | 0.851555 | 8.226142e-61 | -8.615850e-47 |
| Msa0601110 | Msa1439680 | 0.851040 | 1.149719e-60 | -8.615850e-47 |
| Msa0601110 | Msa1442290 | 0.813245 | 2.821889e-51 | -8.615850e-47 |
| Msa0601110 | Msa1450530 | 0.851696 | 7.499966e-61 | -8.615850e-47 |
| Msa0601110 | Msa1453670 | 0.801411 | 9.120150e-49 | -8.615850e-47 |
| Msa0601110 | Msa1455660 | 0.805821 | 1.109504e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601110 | MtrunA17_Chr4g0026171 | 97.647 | 170 | 4 | 0 | 73 | 242 | 1 | 170 | 9.99e-121 | 340 |
| Msa0601110 | MtrunA17_Chr2g0321621 | 66.857 | 175 | 56 | 2 | 70 | 242 | 35 | 209 | 2.46e-82 | 245 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601110 | AT5G22430.1 | 47.134 | 157 | 81 | 2 | 87 | 242 | 17 | 172 | 7.96e-45 | 148 |
| Msa0601110 | AT2G27385.2 | 45.509 | 167 | 80 | 4 | 77 | 242 | 6 | 162 | 3.00e-40 | 136 |
| Msa0601110 | AT2G27385.1 | 44.382 | 178 | 85 | 5 | 66 | 242 | 9 | 173 | 3.20e-40 | 137 |
| Msa0601110 | AT2G27385.3 | 44.382 | 178 | 85 | 5 | 66 | 242 | 9 | 173 | 3.20e-40 | 137 |
Find 47 sgRNAs with CRISPR-Local
Find 507 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTTACAATTTGTGTTT+TGG | 0.164797 | 4_2:+43517959 | None:intergenic |
| CAAGTTTCACAAGTTATTAA+AGG | 0.220047 | 4_2:-43518039 | Msa0601110:CDS |
| TATCTTTGTGATCTCGAATA+TGG | 0.253569 | 4_2:-43524604 | Msa0601110:CDS |
| GCTATCTTTGTCAATATTCT+TGG | 0.268094 | 4_2:+43522988 | None:intergenic |
| TGAACACACATGATTAATTA+AGG | 0.275899 | 4_2:+43517832 | None:intergenic |
| CGAATATGGTTGCATTCTTA+AGG | 0.295539 | 4_2:-43524590 | Msa0601110:intron |
| AACTGTTTGGCAAAACTTCT+TGG | 0.296592 | 4_2:-43518096 | Msa0601110:CDS |
| ATCAGCATGTGAAATTGTTC+AGG | 0.312927 | 4_2:-43519061 | Msa0601110:CDS |
| CAAAGGAAGATCAATAGTTT+TGG | 0.317110 | 4_2:+43517918 | None:intergenic |
| TCTTCCTTTGCCTCCAGAAT+GGG | 0.330802 | 4_2:-43517905 | Msa0601110:CDS |
| CTATCTTTGTCAATATTCTT+GGG | 0.336422 | 4_2:+43522989 | None:intergenic |
| CTAGGTGCCAAACCCCATTC+TGG | 0.344968 | 4_2:+43517892 | None:intergenic |
| TGTAAGGCTGCAAAACCTAT+TGG | 0.353116 | 4_2:-43517946 | Msa0601110:CDS |
| CTTTAATAACTTGTGAAACT+TGG | 0.355048 | 4_2:+43518040 | None:intergenic |
| AATTAAGGTATTCCAATGAT+AGG | 0.380107 | 4_2:+43517847 | None:intergenic |
| CAAAGCAGATATATGTTGTA+TGG | 0.380242 | 4_2:-43517603 | Msa0601110:three_prime_UTR |
| ACTCATAGCTACGATTTATC+TGG | 0.396323 | 4_2:-43519015 | Msa0601110:intron |
| TTTGCCTCCAGAATGGGGTT+TGG | 0.402516 | 4_2:-43517899 | Msa0601110:CDS |
| ATCTTCCTTTGCCTCCAGAA+TGG | 0.404991 | 4_2:-43517906 | Msa0601110:CDS |
| TCTGGATAGACTACGATGTT+TGG | 0.406264 | 4_2:+43524688 | None:intergenic |
| GCAGTTGCCGCAGTTGGGAT+AGG | 0.416979 | 4_2:-43523018 | Msa0601110:CDS |
| ATGTACTAACATTAGTTCAT+AGG | 0.454796 | 4_2:+43517649 | None:intergenic |
| CTTCTGTAGTTGTCATAGCT+AGG | 0.461561 | 4_2:+43518172 | None:intergenic |
| GAACAATTTCACATGCTGAT+AGG | 0.462045 | 4_2:+43519064 | None:intergenic |
| TGAGGGAAGGTTAACCTTGA+AGG | 0.474424 | 4_2:+43518140 | None:intergenic |
| GTGATGGCGGTCATCATGTC+TGG | 0.490951 | 4_2:+43524670 | None:intergenic |
| TGTTTGGCAAAACTTCTTGG+TGG | 0.491974 | 4_2:-43518093 | Msa0601110:CDS |
| CAGTTGCCGCAGTTGGGATA+GGG | 0.494733 | 4_2:-43523017 | Msa0601110:CDS |
| AGTTGGCAGTTGCCGCAGTT+GGG | 0.496888 | 4_2:-43523023 | Msa0601110:CDS |
| CTTCCTTTGCCTCCAGAATG+GGG | 0.503336 | 4_2:-43517904 | Msa0601110:CDS |
| ATTCCAATGATAGGAACAAA+AGG | 0.504181 | 4_2:+43517856 | None:intergenic |
| AGAAGAAGATGGCTCCTTCA+AGG | 0.515472 | 4_2:-43518154 | Msa0601110:CDS |
| GAGTTGGCAGTTGCCGCAGT+TGG | 0.516182 | 4_2:-43523024 | Msa0601110:CDS |
| AGATATATGTTGTATGGGTG+AGG | 0.540735 | 4_2:-43517597 | Msa0601110:three_prime_UTR |
| CATGATATCAAGAAACTAAG+AGG | 0.542494 | 4_2:+43517985 | None:intergenic |
| AAAGCAGATATATGTTGTAT+GGG | 0.555176 | 4_2:-43517602 | Msa0601110:three_prime_UTR |
| AAACCCCATTCTGGAGGCAA+AGG | 0.556721 | 4_2:+43517901 | None:intergenic |
| TCAGCATGTGAAATTGTTCA+GGG | 0.561309 | 4_2:-43519060 | Msa0601110:CDS |
| AAAGGTACATAATAGCTACT+AGG | 0.564274 | 4_2:+43517874 | None:intergenic |
| TATGCCATGAGCAATGAAGC+AGG | 0.565586 | 4_2:+43519138 | None:intergenic |
| ATTAATCATGTGTGTTCAAG+TGG | 0.570855 | 4_2:-43517827 | Msa0601110:three_prime_UTR |
| GATGTTTGGAAGAAGCTCCA+TGG | 0.593332 | 4_2:+43524702 | None:intergenic |
| ATGACAACTACAGAAGAAGA+TGG | 0.604128 | 4_2:-43518165 | Msa0601110:CDS |
| AAGGTCACAGTGAAATGTGA+AGG | 0.615631 | 4_2:-43518204 | Msa0601110:CDS |
| ATGAATCATATATGTAGCTG+TGG | 0.638361 | 4_2:-43517712 | Msa0601110:three_prime_UTR |
| GGTGCCAAACCCCATTCTGG+AGG | 0.664114 | 4_2:+43517895 | None:intergenic |
| GTATGTCCCTATCCCAACTG+CGG | 0.704790 | 4_2:+43523011 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAATATATATTTTTAA+AGG | + | chr4_2:43518434-43518453 | None:intergenic | 0.0% |
| !! | AAAACAAAAAATAAAGAAAA+AGG | - | chr4_2:43517620-43517639 | Msa0601110:three_prime_UTR | 10.0% |
| !!! | TACATGTTTTTTTTTTTTAA+AGG | + | chr4_2:43518030-43518049 | None:intergenic | 10.0% |
| !! | ATTAAATTTACAAATGATTT+AGG | + | chr4_2:43518179-43518198 | None:intergenic | 10.0% |
| !! | TTTATATATAGTATAGATAA+AGG | - | chr4_2:43520804-43520823 | Msa0601110:intron | 10.0% |
| !! | AAAAATTGATTAATTATCTT+AGG | - | chr4_2:43522284-43522303 | Msa0601110:intron | 10.0% |
| !!! | TTTATTTTTTGTTTTTGTGA+TGG | + | chr4_2:43517615-43517634 | None:intergenic | 15.0% |
| !!! | CACATTAAAAATTTTACTTT+AGG | + | chr4_2:43518410-43518429 | None:intergenic | 15.0% |
| !!! | TTTATATAAAGTCAATTTTG+TGG | - | chr4_2:43518462-43518481 | Msa0601110:intron | 15.0% |
| !!! | AAGCTTCTAAAAAATTAATT+TGG | + | chr4_2:43518592-43518611 | None:intergenic | 15.0% |
| !!! | AATATTAAATTCTGTTTTCA+TGG | + | chr4_2:43518843-43518862 | None:intergenic | 15.0% |
| !! | TTTATTTATACATATGAGAT+TGG | - | chr4_2:43518870-43518889 | Msa0601110:intron | 15.0% |
| !!! | CTAACATGATAATTATTTTT+AGG | + | chr4_2:43520160-43520179 | None:intergenic | 15.0% |
| !! | ATAAATAAAAGCTGAAAAAT+GGG | + | chr4_2:43520657-43520676 | None:intergenic | 15.0% |
| !!! | AATTTATACCATTGTTTTAT+TGG | + | chr4_2:43522845-43522864 | None:intergenic | 15.0% |
| !! | ATGTGAGTATATTAAATATA+GGG | + | chr4_2:43523026-43523045 | None:intergenic | 15.0% |
| !! | AATGTGAGTATATTAAATAT+AGG | + | chr4_2:43523027-43523046 | None:intergenic | 15.0% |
| !! | GAACATTTAATTAAACTAAA+AGG | + | chr4_2:43523306-43523325 | None:intergenic | 15.0% |
| !! | AATAGTAGACATATATATTA+TGG | - | chr4_2:43523361-43523380 | Msa0601110:intron | 15.0% |
| !! | TTTCTTAGATATTATTAACA+AGG | + | chr4_2:43523727-43523746 | None:intergenic | 15.0% |
| !! | ACTTGAGTAATAAAAATTAT+AGG | - | chr4_2:43524471-43524490 | Msa0601110:intron | 15.0% |
| !! | CTTGAGTAATAAAAATTATA+GGG | - | chr4_2:43524472-43524491 | Msa0601110:intron | 15.0% |
| !! | ACAAAAAATAAAGAAAAAGG+AGG | - | chr4_2:43517623-43517642 | Msa0601110:three_prime_UTR | 20.0% |
| !!! | TTTTGATGTTACTATGTTAT+AGG | - | chr4_2:43518268-43518287 | Msa0601110:intron | 20.0% |
| !! | TTTAAGTGACTAATCTTTAT+CGG | - | chr4_2:43518309-43518328 | Msa0601110:intron | 20.0% |
| !!! | TGTTTTGTATGGATAAAATT+TGG | + | chr4_2:43518717-43518736 | None:intergenic | 20.0% |
| !! | ATTCATTAATCTCATTTGTT+AGG | - | chr4_2:43519030-43519049 | Msa0601110:CDS | 20.0% |
| !!! | CTTTTTTTTTTTGTAAGCTT+TGG | + | chr4_2:43519851-43519870 | None:intergenic | 20.0% |
| !! | TGATTCTTCAAAATAGTTAT+TGG | + | chr4_2:43520364-43520383 | None:intergenic | 20.0% |
| !!! | AATAACTATTTTGAAGAATC+AGG | - | chr4_2:43520363-43520382 | Msa0601110:intron | 20.0% |
| !!! | ATAACTATTTTGAAGAATCA+GGG | - | chr4_2:43520364-43520383 | Msa0601110:intron | 20.0% |
| !!! | AATAAACTTGTTTGATTGAT+TGG | + | chr4_2:43520621-43520640 | None:intergenic | 20.0% |
| !! | CATAAATAAAAGCTGAAAAA+TGG | + | chr4_2:43520658-43520677 | None:intergenic | 20.0% |
| !! | TATATATACTCGTTAGAAAA+AGG | + | chr4_2:43520860-43520879 | None:intergenic | 20.0% |
| !!! | TTTTTCTAACGAGTATATAT+AGG | - | chr4_2:43520859-43520878 | Msa0601110:intron | 20.0% |
| !!! | TTGAAATAAATTGCTATTTC+AGG | + | chr4_2:43521020-43521039 | None:intergenic | 20.0% |
| !! | ATTTATTTCAACCAAGTTTA+AGG | - | chr4_2:43521029-43521048 | Msa0601110:intron | 20.0% |
| !!! | ATGATGTTTTTTTTTTGTGA+TGG | - | chr4_2:43521276-43521295 | Msa0601110:intron | 20.0% |
| !!! | GAATAAAACATCATTTTACA+AGG | + | chr4_2:43521321-43521340 | None:intergenic | 20.0% |
| !! | AACCAATGTTTAATATAAGA+AGG | - | chr4_2:43521478-43521497 | Msa0601110:intron | 20.0% |
| !! | ATCCTTCTTATATTAAACAT+TGG | + | chr4_2:43521483-43521502 | None:intergenic | 20.0% |
| !! | GAAGGATAAGAATAAAAATA+CGG | - | chr4_2:43521496-43521515 | Msa0601110:intron | 20.0% |
| !! | TAAAAAATTGTATTGGAGAA+GGG | + | chr4_2:43522525-43522544 | None:intergenic | 20.0% |
| !! | TTTATGATAAATATTCCCTA+AGG | + | chr4_2:43522695-43522714 | None:intergenic | 20.0% |
| !!! | ATTTTCTACCAATAAAACAA+TGG | - | chr4_2:43522834-43522853 | Msa0601110:intron | 20.0% |
| !!! | ACATTTATAGTTGATATGTT+TGG | + | chr4_2:43522870-43522889 | None:intergenic | 20.0% |
| !! | AACAACTAATTTATGCATAA+GGG | - | chr4_2:43522998-43523017 | Msa0601110:CDS | 20.0% |
| !!! | TAAAAAATAAGAGCATTGTT+TGG | + | chr4_2:43523504-43523523 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGTCCCTAATTA+TGG | - | chr4_2:43523517-43523536 | Msa0601110:intron | 20.0% |
| !!! | TTTTTAATGTCCCTAATTAT+GGG | - | chr4_2:43523518-43523537 | Msa0601110:intron | 20.0% |
| !! | ATCATGTATGTTTGTTTAAA+AGG | + | chr4_2:43523554-43523573 | None:intergenic | 20.0% |
| !!! | TTTTTTCACTCAAATCAATT+CGG | + | chr4_2:43523658-43523677 | None:intergenic | 20.0% |
| !!! | ATGTAATTTTTTAGAAAGAG+TGG | - | chr4_2:43523850-43523869 | Msa0601110:intron | 20.0% |
| !!! | TGTAATTTTTTAGAAAGAGT+GGG | - | chr4_2:43523851-43523870 | Msa0601110:intron | 20.0% |
| !!! | ATTTTTTGTTTTTGTGATGG+CGG | + | chr4_2:43517612-43517631 | None:intergenic | 25.0% |
| ! | CATCTCATTCAAGTATTATT+GGG | - | chr4_2:43517747-43517766 | Msa0601110:three_prime_UTR | 25.0% |
| ! | AAAAATGCTTCAATTACTCT+TGG | + | chr4_2:43518510-43518529 | None:intergenic | 25.0% |
| !! | TTTGATTCTTGTGTTTTGTA+TGG | + | chr4_2:43518728-43518747 | None:intergenic | 25.0% |
| ! | ATTTATACATATGAGATTGG+AGG | - | chr4_2:43518873-43518892 | Msa0601110:intron | 25.0% |
| ! | CTATCTTTGTCAATATTCTT+GGG | + | chr4_2:43519280-43519299 | None:intergenic | 25.0% |
| ! | TGAGAAATCCAAACAAAAAA+TGG | - | chr4_2:43519825-43519844 | Msa0601110:intron | 25.0% |
| ! | AAAAAGAGACAAAGTTATGA+AGG | - | chr4_2:43519865-43519884 | Msa0601110:intron | 25.0% |
| ! | TATACTTTGCTAATAACGAA+AGG | + | chr4_2:43519963-43519982 | None:intergenic | 25.0% |
| ! | ATTAGCAAAGTATATGATGA+AGG | - | chr4_2:43519969-43519988 | Msa0601110:intron | 25.0% |
| ! | TTAGCAAAGTATATGATGAA+GGG | - | chr4_2:43519970-43519989 | Msa0601110:intron | 25.0% |
| !! | AATCGTCTATTTGCTAAATT+CGG | + | chr4_2:43520183-43520202 | None:intergenic | 25.0% |
| ! | TAACGAGTATATATAGGTTA+GGG | - | chr4_2:43520865-43520884 | Msa0601110:intron | 25.0% |
| !!! | GATAATAGTTAGCTTTACTT+TGG | + | chr4_2:43521451-43521470 | None:intergenic | 25.0% |
| !! | ATTTGCTAATATGAACAGAT+GGG | + | chr4_2:43521727-43521746 | None:intergenic | 25.0% |
| !!! | AATTTGCTAATATGAACAGA+TGG | + | chr4_2:43521728-43521747 | None:intergenic | 25.0% |
| ! | CATATTAGCAAATTAGTGAA+TGG | - | chr4_2:43521734-43521753 | Msa0601110:intron | 25.0% |
| ! | ATAATAAATCCTTACTCCTT+TGG | + | chr4_2:43522201-43522220 | None:intergenic | 25.0% |
| !!! | TAATTATCTTAGGCTTTGTT+TGG | - | chr4_2:43522294-43522313 | Msa0601110:intron | 25.0% |
| !!! | AATTATCTTAGGCTTTGTTT+GGG | - | chr4_2:43522295-43522314 | Msa0601110:intron | 25.0% |
| ! | CTAAAAAATTGTATTGGAGA+AGG | + | chr4_2:43522526-43522545 | None:intergenic | 25.0% |
| ! | GAGGAACTAAAAAATTGTAT+TGG | + | chr4_2:43522532-43522551 | None:intergenic | 25.0% |
| ! | ATAGTAGAAATCTATACTGA+GGG | - | chr4_2:43522949-43522968 | Msa0601110:intron | 25.0% |
| ! | CTTATGCATAAATTAGTTGT+TGG | + | chr4_2:43522999-43523018 | None:intergenic | 25.0% |
| ! | CAACAACTAATTTATGCATA+AGG | - | chr4_2:43522997-43523016 | Msa0601110:CDS | 25.0% |
| ! | ACAACTAATTTATGCATAAG+GGG | - | chr4_2:43522999-43523018 | Msa0601110:CDS | 25.0% |
| ! | TAAAATTGCTCCCATAATTA+GGG | + | chr4_2:43523531-43523550 | None:intergenic | 25.0% |
| !! | AACGTCTCAAATTATACTTT+TGG | - | chr4_2:43523823-43523842 | Msa0601110:intron | 25.0% |
| !!! | GTAATTTTTTAGAAAGAGTG+GGG | - | chr4_2:43523852-43523871 | Msa0601110:intron | 25.0% |
| !!! | TAATTTTTTAGAAAGAGTGG+GGG | - | chr4_2:43523853-43523872 | Msa0601110:intron | 25.0% |
| !! | TCCATGATTTTCAGATATTA+AGG | - | chr4_2:43524043-43524062 | Msa0601110:intron | 25.0% |
| ! | ACCTTAATATCTGAAAATCA+TGG | + | chr4_2:43524047-43524066 | None:intergenic | 25.0% |
| !!! | TGAAACTTGGTTTTGTTTTT+TGG | + | chr4_2:43524216-43524235 | None:intergenic | 25.0% |
| !! | CTTTAATAACTTGTGAAACT+TGG | + | chr4_2:43524229-43524248 | None:intergenic | 25.0% |
| ! | CAAGTTTCACAAGTTATTAA+AGG | - | chr4_2:43524227-43524246 | Msa0601110:intron | 25.0% |
| !! | AATTAAGGTATTCCAATGAT+AGG | + | chr4_2:43524422-43524441 | None:intergenic | 25.0% |
| ! | TGAACACACATGATTAATTA+AGG | + | chr4_2:43524437-43524456 | None:intergenic | 25.0% |
| ! | ATGTACTAACATTAGTTCAT+AGG | + | chr4_2:43524620-43524639 | None:intergenic | 25.0% |
| ! | AAAGCAGATATATGTTGTAT+GGG | - | chr4_2:43524664-43524683 | Msa0601110:CDS | 25.0% |
| TATCTTTGTGATCTCGAATA+TGG | - | chr4_2:43517662-43517681 | Msa0601110:three_prime_UTR | 30.0% | |
| ! | ATTTCTTCCAATTTTACCAG+AGG | + | chr4_2:43517720-43517739 | None:intergenic | 30.0% |
| CCAATAATACTTGAATGAGA+TGG | + | chr4_2:43517749-43517768 | None:intergenic | 30.0% | |
| CCATCTCATTCAAGTATTAT+TGG | - | chr4_2:43517746-43517765 | Msa0601110:three_prime_UTR | 30.0% | |
| ACACTATCAAACACAACATT+TGG | + | chr4_2:43517775-43517794 | None:intergenic | 30.0% | |
| !! | TAGTTTGTTAGCTACTTTGT+TGG | - | chr4_2:43517939-43517958 | Msa0601110:CDS | 30.0% |
| !! | GCTTTAGGTCTCAAAATTTT+GGG | + | chr4_2:43518625-43518644 | None:intergenic | 30.0% |
| AAACACAAGAATCAAATTCG+TGG | - | chr4_2:43518732-43518751 | Msa0601110:intron | 30.0% | |
| AACACAAGAATCAAATTCGT+GGG | - | chr4_2:43518733-43518752 | Msa0601110:intron | 30.0% | |
| ATCAAAAAGAGATTGCTCTA+AGG | + | chr4_2:43518789-43518808 | None:intergenic | 30.0% | |
| ! | TAATCTCATTTGTTAGGTTG+AGG | - | chr4_2:43519036-43519055 | Msa0601110:CDS | 30.0% |
| !! | AATCTCATTTGTTAGGTTGA+GGG | - | chr4_2:43519037-43519056 | Msa0601110:CDS | 30.0% |
| ATGCTGAAAATGTTTGTCAT+CGG | + | chr4_2:43519087-43519106 | None:intergenic | 30.0% | |
| ACGAAAGCTAAAAATCTTTC+TGG | + | chr4_2:43519116-43519135 | None:intergenic | 30.0% | |
| ATTAAAGAACCGTAAGTTGT+AGG | - | chr4_2:43519194-43519213 | Msa0601110:intron | 30.0% | |
| CTCCTAATGCAATACAATAT+GGG | + | chr4_2:43519225-43519244 | None:intergenic | 30.0% | |
| ACTCCTAATGCAATACAATA+TGG | + | chr4_2:43519226-43519245 | None:intergenic | 30.0% | |
| TATTGTATTGCATTAGGAGT+TGG | - | chr4_2:43519226-43519245 | Msa0601110:intron | 30.0% | |
| GCTATCTTTGTCAATATTCT+TGG | + | chr4_2:43519281-43519300 | None:intergenic | 30.0% | |
| GTATTACTTTCTTGCACTTA+AGG | + | chr4_2:43519376-43519395 | None:intergenic | 30.0% | |
| AATAATACTCATAGCGATAC+AGG | + | chr4_2:43519398-43519417 | None:intergenic | 30.0% | |
| TGTATCGCTATGAGTATTAT+TGG | - | chr4_2:43519397-43519416 | Msa0601110:intron | 30.0% | |
| CAAGAGTAAGTTAATTCTGT+TGG | + | chr4_2:43519729-43519748 | None:intergenic | 30.0% | |
| AAGATCCTAAGTATGGAAAA+TGG | - | chr4_2:43519919-43519938 | Msa0601110:intron | 30.0% | |
| TAGCAAAGTATATGATGAAG+GGG | - | chr4_2:43519971-43519990 | Msa0601110:intron | 30.0% | |
| TATGGAAGGAGAAGATATAT+CGG | - | chr4_2:43520010-43520029 | Msa0601110:intron | 30.0% | |
| AAATATTATCATGTTGAGCG+TGG | - | chr4_2:43520058-43520077 | Msa0601110:intron | 30.0% | |
| !! | TCACATCATGTTATTTCTCA+GGG | - | chr4_2:43520095-43520114 | Msa0601110:intron | 30.0% |
| AGAGAGATAATTCTTTCTCA+AGG | - | chr4_2:43520238-43520257 | Msa0601110:intron | 30.0% | |
| ACACTGTATGCAACATTATT+TGG | - | chr4_2:43520539-43520558 | Msa0601110:intron | 30.0% | |
| TGCAACATTATTTGGCTAAT+AGG | - | chr4_2:43520547-43520566 | Msa0601110:intron | 30.0% | |
| ATTATAGCGCTCTACTAAAA+CGG | - | chr4_2:43520772-43520791 | Msa0601110:intron | 30.0% | |
| TATACTCGTTAGAAAAAGGA+AGG | + | chr4_2:43520856-43520875 | None:intergenic | 30.0% | |
| CTAACGAGTATATATAGGTT+AGG | - | chr4_2:43520864-43520883 | Msa0601110:intron | 30.0% | |
| TTGCATAAATATGCTGTACA+TGG | - | chr4_2:43520990-43521009 | Msa0601110:intron | 30.0% | |
| ATAAATATGCTGTACATGGT+GGG | - | chr4_2:43520994-43521013 | Msa0601110:intron | 30.0% | |
| CAGAAATAGATCATGTTTCA+CGG | + | chr4_2:43521100-43521119 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTTTTTGTGATGGC+TGG | - | chr4_2:43521280-43521299 | Msa0601110:intron | 30.0% |
| !!! | GTTTTTTTTTTGTGATGGCT+GGG | - | chr4_2:43521281-43521300 | Msa0601110:intron | 30.0% |
| !!! | TTTTTTTTTTGTGATGGCTG+GGG | - | chr4_2:43521282-43521301 | Msa0601110:intron | 30.0% |
| ! | AACATCATTTTACAAGGTCT+GGG | + | chr4_2:43521315-43521334 | None:intergenic | 30.0% |
| ! | AAACATCATTTTACAAGGTC+TGG | + | chr4_2:43521316-43521335 | None:intergenic | 30.0% |
| CTATTCGAAATTCAAACTGT+GGG | + | chr4_2:43521343-43521362 | None:intergenic | 30.0% | |
| ACTATTCGAAATTCAAACTG+TGG | + | chr4_2:43521344-43521363 | None:intergenic | 30.0% | |
| AGTCATACTTGAAAATAACC+CGG | - | chr4_2:43521700-43521719 | Msa0601110:intron | 30.0% | |
| CAAATGATGTAAGATGGTTA+CGG | - | chr4_2:43521863-43521882 | Msa0601110:intron | 30.0% | |
| !!! | TTTTTTAGTTCCTCCAAATG+AGG | - | chr4_2:43522538-43522557 | Msa0601110:intron | 30.0% |
| TGGAAGAAATAGAGGAAAAT+GGG | + | chr4_2:43522611-43522630 | None:intergenic | 30.0% | |
| !!! | AGGGAGTAGTATTTGTTTTT+TGG | - | chr4_2:43522785-43522804 | Msa0601110:intron | 30.0% |
| !!! | GGGAGTAGTATTTGTTTTTT+GGG | - | chr4_2:43522786-43522805 | Msa0601110:intron | 30.0% |
| TCTACATTAACTGTTTGGAT+AGG | + | chr4_2:43522912-43522931 | None:intergenic | 30.0% | |
| TACTATCATGCATAGTATGA+GGG | + | chr4_2:43522935-43522954 | None:intergenic | 30.0% | |
| GATAGTAGAAATCTATACTG+AGG | - | chr4_2:43522948-43522967 | Msa0601110:intron | 30.0% | |
| GTGTGAAGCTTATAATATAG+AGG | + | chr4_2:43523063-43523082 | None:intergenic | 30.0% | |
| AAACAACGAAATTGAAGAGA+AGG | + | chr4_2:43523092-43523111 | None:intergenic | 30.0% | |
| TTGTTTGGAGATTATAGCTA+GGG | + | chr4_2:43523489-43523508 | None:intergenic | 30.0% | |
| ATTGTTTGGAGATTATAGCT+AGG | + | chr4_2:43523490-43523509 | None:intergenic | 30.0% | |
| GTAAAATTGCTCCCATAATT+AGG | + | chr4_2:43523532-43523551 | None:intergenic | 30.0% | |
| !! | ACAAGAGTTTTTGTGTTGTT+TGG | + | chr4_2:43523587-43523606 | None:intergenic | 30.0% |
| !!! | CTCCCCTAATTTTTTTGTAA+GGG | - | chr4_2:43523682-43523701 | Msa0601110:intron | 30.0% |
| ! | AAGGCCCTTTATTTGATTAA+GGG | + | chr4_2:43523708-43523727 | None:intergenic | 30.0% |
| !!! | ACGTTTTTTTCCTCTCTTTT+CGG | + | chr4_2:43523808-43523827 | None:intergenic | 30.0% |
| !!! | AATTTTTTAGAAAGAGTGGG+GGG | - | chr4_2:43523854-43523873 | Msa0601110:intron | 30.0% |
| AAAGAAGCTATCTTGACTTA+TGG | - | chr4_2:43523879-43523898 | Msa0601110:intron | 30.0% | |
| AAAAACTTCCATGAACTGTT+TGG | - | chr4_2:43524157-43524176 | Msa0601110:intron | 30.0% | |
| !! | TTTTTGGCATAAAGCTGAAT+TGG | + | chr4_2:43524200-43524219 | None:intergenic | 30.0% |
| CATGATATCAAGAAACTAAG+AGG | + | chr4_2:43524284-43524303 | None:intergenic | 30.0% | |
| ! | AGCCTTACAATTTGTGTTTT+GGG | + | chr4_2:43524309-43524328 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGGAAGAACCAAT+AGG | + | chr4_2:43524338-43524357 | None:intergenic | 30.0% |
| ! | CAAAGGAAGATCAATAGTTT+TGG | + | chr4_2:43524351-43524370 | None:intergenic | 30.0% |
| ! | AAAGGTACATAATAGCTACT+AGG | + | chr4_2:43524395-43524414 | None:intergenic | 30.0% |
| ATTCCAATGATAGGAACAAA+AGG | + | chr4_2:43524413-43524432 | None:intergenic | 30.0% | |
| ATTAATCATGTGTGTTCAAG+TGG | - | chr4_2:43524439-43524458 | Msa0601110:intron | 30.0% | |
| ATGAATCATATATGTAGCTG+TGG | - | chr4_2:43524554-43524573 | Msa0601110:intron | 30.0% | |
| CAAAGCAGATATATGTTGTA+TGG | - | chr4_2:43524663-43524682 | Msa0601110:CDS | 30.0% | |
| CGAATATGGTTGCATTCTTA+AGG | - | chr4_2:43517676-43517695 | Msa0601110:three_prime_UTR | 35.0% | |
| TTTAGGCCTCTTAATCTGTT+AGG | + | chr4_2:43518393-43518412 | None:intergenic | 35.0% | |
| !!! | GGCTTTAGGTCTCAAAATTT+TGG | + | chr4_2:43518626-43518645 | None:intergenic | 35.0% |
| GAGGGAAAAATTCATACCAA+CGG | - | chr4_2:43519055-43519074 | Msa0601110:CDS | 35.0% | |
| TGAAAATGTTTGTCATCGGT+TGG | + | chr4_2:43519083-43519102 | None:intergenic | 35.0% | |
| TAGCTTTCGTTTGAATCATC+TGG | - | chr4_2:43519126-43519145 | Msa0601110:CDS | 35.0% | |
| TGCCCATATTGTATTGCATT+AGG | - | chr4_2:43519220-43519239 | Msa0601110:intron | 35.0% | |
| !! | CTCTTTGTATTGGTTCACAA+AGG | + | chr4_2:43519340-43519359 | None:intergenic | 35.0% |
| TTGTGAACCAATACAAAGAG+TGG | - | chr4_2:43519340-43519359 | Msa0601110:intron | 35.0% | |
| ACATGAACCAATACAAAGAG+TGG | - | chr4_2:43519476-43519495 | Msa0601110:intron | 35.0% | |
| AATAATACCCATAGCGATAC+GGG | + | chr4_2:43519534-43519553 | None:intergenic | 35.0% | |
| CAATAATACCCATAGCGATA+CGG | + | chr4_2:43519535-43519554 | None:intergenic | 35.0% | |
| TCAGATAGCACTCTTTGTAT+TGG | + | chr4_2:43519622-43519641 | None:intergenic | 35.0% | |
| !!! | AGCTTTGGCCATTTTTTGTT+TGG | + | chr4_2:43519836-43519855 | None:intergenic | 35.0% |
| AAAGTTATGAAGGTTGTCGA+AGG | - | chr4_2:43519875-43519894 | Msa0601110:intron | 35.0% | |
| AAGTTATGAAGGTTGTCGAA+GGG | - | chr4_2:43519876-43519895 | Msa0601110:intron | 35.0% | |
| GGAACAAAAGATCCTAAGTA+TGG | - | chr4_2:43519912-43519931 | Msa0601110:intron | 35.0% | |
| ATGGAAAATGGTTGCCAAAT+TGG | - | chr4_2:43519931-43519950 | Msa0601110:intron | 35.0% | |
| TGGAAAATGGTTGCCAAATT+GGG | - | chr4_2:43519932-43519951 | Msa0601110:intron | 35.0% | |
| ! | TATATGATGAAGGGGTGTAT+CGG | - | chr4_2:43519979-43519998 | Msa0601110:intron | 35.0% |
| ATGGAAGGAGAAGATATATC+GGG | - | chr4_2:43520011-43520030 | Msa0601110:intron | 35.0% | |
| !! | GTCACATCATGTTATTTCTC+AGG | - | chr4_2:43520094-43520113 | Msa0601110:intron | 35.0% |
| TGTTACTATGCAATGTGACT+CGG | + | chr4_2:43520301-43520320 | None:intergenic | 35.0% | |
| TTCGTCAACGGATAATAATG+AGG | - | chr4_2:43520426-43520445 | Msa0601110:intron | 35.0% | |
| !! | TTCGCAAAAACTAGCCTTAT+AGG | - | chr4_2:43520510-43520529 | Msa0601110:intron | 35.0% |
| !! | TCGCAAAAACTAGCCTTATA+GGG | - | chr4_2:43520511-43520530 | Msa0601110:intron | 35.0% |
| !!! | CGCTATGTGCAATTGTTTTT+TGG | + | chr4_2:43520703-43520722 | None:intergenic | 35.0% |
| ACTAATTCGTAGCTACTTGA+TGG | + | chr4_2:43520912-43520931 | None:intergenic | 35.0% | |
| CATAAATATGCTGTACATGG+TGG | - | chr4_2:43520993-43521012 | Msa0601110:intron | 35.0% | |
| ATGTTGTAGGACCTTAAACT+TGG | + | chr4_2:43521043-43521062 | None:intergenic | 35.0% | |
| AGAGTCAAGCTATATGTTGT+AGG | + | chr4_2:43521056-43521075 | None:intergenic | 35.0% | |
| AATAGATCATGTTTCACGGT+GGG | + | chr4_2:43521096-43521115 | None:intergenic | 35.0% | |
| AAATAGATCATGTTTCACGG+TGG | + | chr4_2:43521097-43521116 | None:intergenic | 35.0% | |
| CGTGAAACATGATCTATTTC+TGG | - | chr4_2:43521098-43521117 | Msa0601110:intron | 35.0% | |
| ! | ACATCATTTTACAAGGTCTG+GGG | + | chr4_2:43521314-43521333 | None:intergenic | 35.0% |
| TGTTAGGAGACAAACAAACA+TGG | + | chr4_2:43521565-43521584 | None:intergenic | 35.0% | |
| ATCTTTACATTCCAACTTCG+AGG | + | chr4_2:43521595-43521614 | None:intergenic | 35.0% | |
| !!! | ACAAATATGGCAGTTTTGGA+GGG | + | chr4_2:43521783-43521802 | None:intergenic | 35.0% |
| AACACGCAAATGATGTAAGA+TGG | - | chr4_2:43521857-43521876 | Msa0601110:intron | 35.0% | |
| !! | ATACATCAACAAGCATTGGA+AGG | + | chr4_2:43522132-43522151 | None:intergenic | 35.0% |
| CATCATACATCAACAAGCAT+TGG | + | chr4_2:43522136-43522155 | None:intergenic | 35.0% | |
| CTTACTCCTTTGGCAAATTT+GGG | + | chr4_2:43522191-43522210 | None:intergenic | 35.0% | |
| AAGGAAAGGAAAGACTTTGA+GGG | - | chr4_2:43522330-43522349 | Msa0601110:intron | 35.0% | |
| ! | TTGTATTGGAGAAGGGTTTT+GGG | + | chr4_2:43522518-43522537 | None:intergenic | 35.0% |
| ! | ATTGTATTGGAGAAGGGTTT+TGG | + | chr4_2:43522519-43522538 | None:intergenic | 35.0% |
| GTGGAAGAAATAGAGGAAAA+TGG | + | chr4_2:43522612-43522631 | None:intergenic | 35.0% | |
| ACTTGTATACCAAATCAGAG+AGG | - | chr4_2:43522765-43522784 | Msa0601110:intron | 35.0% | |
| CTTGTATACCAAATCAGAGA+GGG | - | chr4_2:43522766-43522785 | Msa0601110:intron | 35.0% | |
| CTACTATCATGCATAGTATG+AGG | + | chr4_2:43522936-43522955 | None:intergenic | 35.0% | |
| GAACAATTTCACATGCTGAT+AGG | + | chr4_2:43523205-43523224 | None:intergenic | 35.0% | |
| ATCAGCATGTGAAATTGTTC+AGG | - | chr4_2:43523205-43523224 | Msa0601110:intron | 35.0% | |
| TCAGCATGTGAAATTGTTCA+GGG | - | chr4_2:43523206-43523225 | Msa0601110:intron | 35.0% | |
| ACTCATAGCTACGATTTATC+TGG | - | chr4_2:43523251-43523270 | Msa0601110:intron | 35.0% | |
| ! | GTTTTACCAGATGTCTCTTT+CGG | + | chr4_2:43523467-43523486 | None:intergenic | 35.0% |
| TCAATTCGGATGTACACATA+CGG | + | chr4_2:43523644-43523663 | None:intergenic | 35.0% | |
| CCTTACAAAAAAATTAGGGG+AGG | + | chr4_2:43523684-43523703 | None:intergenic | 35.0% | |
| !!! | CCTCCCCTAATTTTTTTGTA+AGG | - | chr4_2:43523681-43523700 | Msa0601110:intron | 35.0% |
| GGCCCTTACAAAAAAATTAG+GGG | + | chr4_2:43523687-43523706 | None:intergenic | 35.0% | |
| GGGCCCTTACAAAAAAATTA+GGG | + | chr4_2:43523688-43523707 | None:intergenic | 35.0% | |
| AGGGCCCTTACAAAAAAATT+AGG | + | chr4_2:43523689-43523708 | None:intergenic | 35.0% | |
| AAGGGCCCTTAATCAAATAA+AGG | - | chr4_2:43523700-43523719 | Msa0601110:intron | 35.0% | |
| AGGGCCCTTAATCAAATAAA+GGG | - | chr4_2:43523701-43523720 | Msa0601110:intron | 35.0% | |
| ! | CAAGGCCCTTTATTTGATTA+AGG | + | chr4_2:43523709-43523728 | None:intergenic | 35.0% |
| ! | TTCTAGCTAGGTACATGTTT+GGG | + | chr4_2:43523777-43523796 | None:intergenic | 35.0% |
| AAGTATACTTCCGAAAAGAG+AGG | - | chr4_2:43523795-43523814 | Msa0601110:intron | 35.0% | |
| CATCGACCATTTGACAAATA+AGG | + | chr4_2:43523931-43523950 | None:intergenic | 35.0% | |
| ATGACAACTACAGAAGAAGA+TGG | - | chr4_2:43524101-43524120 | Msa0601110:intron | 35.0% | |
| ! | GAAGTTTTTGTGTTGTCTGA+GGG | + | chr4_2:43524146-43524165 | None:intergenic | 35.0% |
| ! | AAGTTTTGCCAAACAGTTCA+TGG | + | chr4_2:43524168-43524187 | None:intergenic | 35.0% |
| AACTGTTTGGCAAAACTTCT+TGG | - | chr4_2:43524170-43524189 | Msa0601110:intron | 35.0% | |
| !! | CCTTACAATTTGTGTTTTGG+GGG | + | chr4_2:43524307-43524326 | None:intergenic | 35.0% |
| ! | GCCTTACAATTTGTGTTTTG+GGG | + | chr4_2:43524308-43524327 | None:intergenic | 35.0% |
| ! | CAGCCTTACAATTTGTGTTT+TGG | + | chr4_2:43524310-43524329 | None:intergenic | 35.0% |
| ! | GTACCTTTTGTTCCTATCAT+TGG | - | chr4_2:43524407-43524426 | Msa0601110:intron | 35.0% |
| AGATATATGTTGTATGGGTG+AGG | - | chr4_2:43524669-43524688 | Msa0601110:CDS | 35.0% | |
| TCTGGATAGACTACGATGTT+TGG | + | chr4_2:43517581-43517600 | None:intergenic | 40.0% | |
| CTCACAAGTTTCCATCTGTT+AGG | + | chr4_2:43518358-43518377 | None:intergenic | 40.0% | |
| ATGGAAACTTGTGAGACACA+TGG | - | chr4_2:43518363-43518382 | Msa0601110:intron | 40.0% | |
| ATTCGTGGGCATTTATCTAC+AGG | - | chr4_2:43518747-43518766 | Msa0601110:intron | 40.0% | |
| TTCGTGGGCATTTATCTACA+GGG | - | chr4_2:43518748-43518767 | Msa0601110:intron | 40.0% | |
| !! | GCTCTAAGGTGTATGAGATT+TGG | + | chr4_2:43518775-43518794 | None:intergenic | 40.0% |
| AGAAGATGTCGCGAATGAAA+AGG | - | chr4_2:43518971-43518990 | Msa0601110:intron | 40.0% | |
| TCGCGAATGAAAAGGAGATT+AGG | - | chr4_2:43518979-43518998 | Msa0601110:intron | 40.0% | |
| TTCGTTTGAATCATCTGGTC+TGG | - | chr4_2:43519131-43519150 | Msa0601110:CDS | 40.0% | |
| AAACCTTTGTGCACTTACGT+GGG | + | chr4_2:43519303-43519322 | None:intergenic | 40.0% | |
| TAAGTGCACAAAGGTTTGTG+TGG | - | chr4_2:43519306-43519325 | Msa0601110:intron | 40.0% | |
| GAACCAATACAAAGAGTGGT+AGG | - | chr4_2:43519344-43519363 | Msa0601110:intron | 40.0% | |
| TGACCTACCACTCTTTGTAT+TGG | + | chr4_2:43519350-43519369 | None:intergenic | 40.0% | |
| GTATTATTGGCCGAGCATAA+CGG | - | chr4_2:43519410-43519429 | Msa0601110:intron | 40.0% | |
| GAACCAATACAAAGAGTGGT+AGG | - | chr4_2:43519344-43519363 | Msa0601110:intron | 40.0% | |
| TGACCTACCACTCTTTGTAT+TGG | + | chr4_2:43519350-43519369 | None:intergenic | 40.0% | |
| CGTATCGCTATGGGTATTAT+TGG | - | chr4_2:43519533-43519552 | Msa0601110:intron | 40.0% | |
| GTATTATTGGCCGAGCATAA+CGG | - | chr4_2:43519410-43519429 | Msa0601110:intron | 40.0% | |
| ! | ACTGCTTTCGGTTTGCAAAT+GGG | - | chr4_2:43519572-43519591 | Msa0601110:intron | 40.0% |
| TCCACTGCCTATACTCTAAA+AGG | + | chr4_2:43519674-43519693 | None:intergenic | 40.0% | |
| CCATTAACAATATTGCGTGC+AGG | + | chr4_2:43519759-43519778 | None:intergenic | 40.0% | |
| CCTGCACGCAATATTGTTAA+TGG | - | chr4_2:43519756-43519775 | Msa0601110:intron | 40.0% | |
| GTTAATGGAACTCGATTCCT+TGG | - | chr4_2:43519771-43519790 | Msa0601110:intron | 40.0% | |
| AGTTATGAAGGTTGTCGAAG+GGG | - | chr4_2:43519877-43519896 | Msa0601110:intron | 40.0% | |
| !! | TCGAAGGGGATTAGTCAAAT+TGG | - | chr4_2:43519891-43519910 | Msa0601110:intron | 40.0% |
| ! | GGCAACCATTTTCCATACTT+AGG | + | chr4_2:43519927-43519946 | None:intergenic | 40.0% |
| AAATGGTTGCCAAATTGGGA+TGG | - | chr4_2:43519936-43519955 | Msa0601110:intron | 40.0% | |
| ! | TATCGGTTGACGAATATGGA+AGG | - | chr4_2:43519996-43520015 | Msa0601110:intron | 40.0% |
| TGGAAGGAGAAGATATATCG+GGG | - | chr4_2:43520012-43520031 | Msa0601110:intron | 40.0% | |
| ! | AGATATATCGGGGGTACAAA+TGG | - | chr4_2:43520022-43520041 | Msa0601110:intron | 40.0% |
| ! | CAACTCACATTTTGCGTTAG+TGG | + | chr4_2:43520264-43520283 | None:intergenic | 40.0% |
| ! | CGCAAAATGTGAGTTGACAA+AGG | - | chr4_2:43520268-43520287 | Msa0601110:intron | 40.0% |
| GGAAGAGACACAATCTAAAG+TGG | - | chr4_2:43520385-43520404 | Msa0601110:intron | 40.0% | |
| TAAAGTGGAGTTGCGCATAA+AGG | - | chr4_2:43520400-43520419 | Msa0601110:intron | 40.0% | |
| AAAGTGGAGTTGCGCATAAA+GGG | - | chr4_2:43520401-43520420 | Msa0601110:intron | 40.0% | |
| AATGAGGAGAAGTTGAAGTC+AGG | - | chr4_2:43520442-43520461 | Msa0601110:intron | 40.0% | |
| ! | ACGATAACTCTCTTGGTAGT+GGG | + | chr4_2:43520484-43520503 | None:intergenic | 40.0% |
| ATCTTGCACGATAACTCTCT+TGG | + | chr4_2:43520491-43520510 | None:intergenic | 40.0% | |
| !! | CGCAAAAACTAGCCTTATAG+GGG | - | chr4_2:43520512-43520531 | Msa0601110:intron | 40.0% |
| AGCGCTCTATTAGAGTAGTT+AGG | - | chr4_2:43520719-43520738 | Msa0601110:intron | 40.0% | |
| GCGCTCTATTAGAGTAGTTA+GGG | - | chr4_2:43520720-43520739 | Msa0601110:intron | 40.0% | |
| CGCTCTATTAGAGTAGTTAG+GGG | - | chr4_2:43520721-43520740 | Msa0601110:intron | 40.0% | |
| TGCTCATACTTTAGCTAGGT+CGG | + | chr4_2:43521541-43521560 | None:intergenic | 40.0% | |
| TGGTTGCTCATACTTTAGCT+AGG | + | chr4_2:43521545-43521564 | None:intergenic | 40.0% | |
| ! | ACTTCGAGGTGAAGTTTGTT+AGG | + | chr4_2:43521581-43521600 | None:intergenic | 40.0% |
| AACAAACTTCACCTCGAAGT+TGG | - | chr4_2:43521581-43521600 | Msa0601110:intron | 40.0% | |
| AATTCTGAATCACCATGACC+TGG | - | chr4_2:43521648-43521667 | Msa0601110:intron | 40.0% | |
| TAATATGAACAGATGGGACC+GGG | + | chr4_2:43521721-43521740 | None:intergenic | 40.0% | |
| CTAATATGAACAGATGGGAC+CGG | + | chr4_2:43521722-43521741 | None:intergenic | 40.0% | |
| ! | TTAGTGAATGGCATCGAGTA+AGG | - | chr4_2:43521746-43521765 | Msa0601110:intron | 40.0% |
| !!! | AAATATGGCAGTTTTGGAGG+GGG | + | chr4_2:43521781-43521800 | None:intergenic | 40.0% |
| !!! | CAAATATGGCAGTTTTGGAG+GGG | + | chr4_2:43521782-43521801 | None:intergenic | 40.0% |
| !! | GACAAATATGGCAGTTTTGG+AGG | + | chr4_2:43521784-43521803 | None:intergenic | 40.0% |
| TTATTCGGGCTCAAACGAAA+TGG | + | chr4_2:43521812-43521831 | None:intergenic | 40.0% | |
| ATGTAAGATGGTTACGGTCA+TGG | - | chr4_2:43521869-43521888 | Msa0601110:intron | 40.0% | |
| GCAAGGTAACAGTTCAGTTT+AGG | + | chr4_2:43521941-43521960 | None:intergenic | 40.0% | |
| CACTAGATGCATGACAACAA+TGG | + | chr4_2:43522105-43522124 | None:intergenic | 40.0% | |
| CTGCACGTAATGATGTCATT+TGG | + | chr4_2:43522168-43522187 | None:intergenic | 40.0% | |
| CCTTACTCCTTTGGCAAATT+TGG | + | chr4_2:43522192-43522211 | None:intergenic | 40.0% | |
| CCAAATTTGCCAAAGGAGTA+AGG | - | chr4_2:43522189-43522208 | Msa0601110:intron | 40.0% | |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr4_2:43522302-43522321 | Msa0601110:intron | 40.0% |
| GAAGGAAAGGAAAGACTTTG+AGG | - | chr4_2:43522329-43522348 | Msa0601110:intron | 40.0% | |
| AGGAAAGGAAAGACTTTGAG+GGG | - | chr4_2:43522331-43522350 | Msa0601110:intron | 40.0% | |
| ! | TTTGAGGGGTGCAAAATATG+AGG | - | chr4_2:43522345-43522364 | Msa0601110:intron | 40.0% |
| ! | TGTATTGGAGAAGGGTTTTG+GGG | + | chr4_2:43522517-43522536 | None:intergenic | 40.0% |
| GAAATAGAGGAAAATGGGAG+AGG | + | chr4_2:43522606-43522625 | None:intergenic | 40.0% | |
| GGAAAAAATGAAGGAGCAAG+TGG | + | chr4_2:43522631-43522650 | None:intergenic | 40.0% | |
| GAAGGCTTGGGAAAAAATGA+AGG | + | chr4_2:43522640-43522659 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr4_2:43522677-43522696 | None:intergenic | 40.0% |
| AAACTCGCAAACAAAGCCTT+AGG | - | chr4_2:43522676-43522695 | Msa0601110:intron | 40.0% | |
| AACTCGCAAACAAAGCCTTA+GGG | - | chr4_2:43522677-43522696 | Msa0601110:intron | 40.0% | |
| ATACTACTCCCTCTCTGATT+TGG | + | chr4_2:43522777-43522796 | None:intergenic | 40.0% | |
| GAGGGTCTACATTAACTGTT+TGG | + | chr4_2:43522917-43522936 | None:intergenic | 40.0% | |
| ! | TTTTCCTGCTTCATTGCTCA+TGG | - | chr4_2:43523124-43523143 | Msa0601110:intron | 40.0% |
| CAATTCGGATGTACACATAC+GGG | + | chr4_2:43523643-43523662 | None:intergenic | 40.0% | |
| ! | CTTCTAGCTAGGTACATGTT+TGG | + | chr4_2:43523778-43523797 | None:intergenic | 40.0% |
| ! | TCGGAAGTATACTTCTAGCT+AGG | + | chr4_2:43523789-43523808 | None:intergenic | 40.0% |
| ACTTATGGTTCCAACGATGT+TGG | - | chr4_2:43523894-43523913 | Msa0601110:intron | 40.0% | |
| TGGAAGAACAATGAGAGTCA+AGG | + | chr4_2:43524027-43524046 | None:intergenic | 40.0% | |
| AAGGTCACAGTGAAATGTGA+AGG | - | chr4_2:43524062-43524081 | Msa0601110:intron | 40.0% | |
| CTTCTGTAGTTGTCATAGCT+AGG | + | chr4_2:43524097-43524116 | None:intergenic | 40.0% | |
| ! | TTTTTGTGTTGTCTGAGGGA+AGG | + | chr4_2:43524142-43524161 | None:intergenic | 40.0% |
| ! | GGAAGTTTTTGTGTTGTCTG+AGG | + | chr4_2:43524147-43524166 | None:intergenic | 40.0% |
| TGTTTGGCAAAACTTCTTGG+TGG | - | chr4_2:43524173-43524192 | Msa0601110:intron | 40.0% | |
| CCCCCAAAACACAAATTGTA+AGG | - | chr4_2:43524304-43524323 | Msa0601110:intron | 40.0% | |
| TGTAAGGCTGCAAAACCTAT+TGG | - | chr4_2:43524320-43524339 | Msa0601110:intron | 40.0% | |
| ! | CCAATTTTACCAGAGGTCGT+TGG | + | chr4_2:43517713-43517732 | None:intergenic | 45.0% |
| CCAACGACCTCTGGTAAAAT+TGG | - | chr4_2:43517710-43517729 | Msa0601110:three_prime_UTR | 45.0% | |
| TCGGAAACTTGTGAGACACA+TGG | - | chr4_2:43518328-43518347 | Msa0601110:intron | 45.0% | |
| CAAGTTTCCATCTGTTAGGC+TGG | + | chr4_2:43518354-43518373 | None:intergenic | 45.0% | |
| ! | CTCCTTTGTTTGTCTCACCA+GGG | + | chr4_2:43518679-43518698 | None:intergenic | 45.0% |
| ! | TCTCCTTTGTTTGTCTCACC+AGG | + | chr4_2:43518680-43518699 | None:intergenic | 45.0% |
| TTGAATCATCTGGTCTGGTC+TGG | - | chr4_2:43519136-43519155 | Msa0601110:CDS | 45.0% | |
| TGGGCATGACCTACAACTTA+CGG | + | chr4_2:43519206-43519225 | None:intergenic | 45.0% | |
| CAAACCTTTGTGCACTTACG+TGG | + | chr4_2:43519304-43519323 | None:intergenic | 45.0% | |
| AAGTAGTCAGCCGTTATGCT+CGG | + | chr4_2:43519423-43519442 | None:intergenic | 45.0% | |
| AGCATAACGGCTGACTACTT+CGG | - | chr4_2:43519423-43519442 | Msa0601110:intron | 45.0% | |
| ! | TGACTACTTCGGGTTTGCAA+AGG | - | chr4_2:43519434-43519453 | Msa0601110:intron | 45.0% |
| ! | GACTACTTCGGGTTTGCAAA+GGG | - | chr4_2:43519435-43519454 | Msa0601110:intron | 45.0% |
| ! | ACTACTTCGGGTTTGCAAAG+GGG | - | chr4_2:43519436-43519455 | Msa0601110:intron | 45.0% |
| TACGACCTTCTTGCACTTAC+GGG | + | chr4_2:43519511-43519530 | None:intergenic | 45.0% | |
| GTACGACCTTCTTGCACTTA+CGG | + | chr4_2:43519512-43519531 | None:intergenic | 45.0% | |
| ! | GACTGCTTTCGGTTTGCAAA+TGG | - | chr4_2:43519571-43519590 | Msa0601110:intron | 45.0% |
| ! | CTGCTTTCGGTTTGCAAATG+GGG | - | chr4_2:43519573-43519592 | Msa0601110:intron | 45.0% |
| ! | TGCTTTCGGTTTGCAAATGG+GGG | - | chr4_2:43519574-43519593 | Msa0601110:intron | 45.0% |
| ! | GCCTATACTCTAAAAGGCCA+GGG | + | chr4_2:43519668-43519687 | None:intergenic | 45.0% |
| ! | TGCCTATACTCTAAAAGGCC+AGG | + | chr4_2:43519669-43519688 | None:intergenic | 45.0% |
| !!! | GCCTTTTAGAGTATAGGCAG+TGG | - | chr4_2:43519670-43519689 | Msa0601110:intron | 45.0% |
| CATCAGTCGATCTTCATCCA+AGG | + | chr4_2:43519791-43519810 | None:intergenic | 45.0% | |
| CTTGGATGAAGATCGACTGA+TGG | - | chr4_2:43519789-43519808 | Msa0601110:intron | 45.0% | |
| GAAGATCGACTGATGGCATT+AGG | - | chr4_2:43519796-43519815 | Msa0601110:intron | 45.0% | |
| ACGAAAGGTCCATCCCAATT+TGG | + | chr4_2:43519948-43519967 | None:intergenic | 45.0% | |
| !! | GGTGTATCGGTTGACGAATA+TGG | - | chr4_2:43519992-43520011 | Msa0601110:intron | 45.0% |
| GGAAGGAGAAGATATATCGG+GGG | - | chr4_2:43520013-43520032 | Msa0601110:intron | 45.0% | |
| ! | ATATCGGGGGTACAAATGGA+AGG | - | chr4_2:43520026-43520045 | Msa0601110:intron | 45.0% |
| GACGATTAAACGATCAAGCG+AGG | - | chr4_2:43520196-43520215 | Msa0601110:intron | 45.0% | |
| GATTAAACGATCAAGCGAGG+TGG | - | chr4_2:43520199-43520218 | Msa0601110:intron | 45.0% | |
| ATCTCTCTTCACTCTGCTGA+GGG | + | chr4_2:43520226-43520245 | None:intergenic | 45.0% | |
| TATCTCTCTTCACTCTGCTG+AGG | + | chr4_2:43520227-43520246 | None:intergenic | 45.0% | |
| GCGTTGAGAGCAAAGATTGT+GGG | + | chr4_2:43520342-43520361 | None:intergenic | 45.0% | |
| GCATAAAGGGACTTCGTCAA+CGG | - | chr4_2:43520414-43520433 | Msa0601110:intron | 45.0% | |
| GAGAAGTTGAAGTCAGGTGT+GGG | - | chr4_2:43520448-43520467 | Msa0601110:intron | 45.0% | |
| AGAAGTTGAAGTCAGGTGTG+GGG | - | chr4_2:43520449-43520468 | Msa0601110:intron | 45.0% | |
| CACGATAACTCTCTTGGTAG+TGG | + | chr4_2:43520485-43520504 | None:intergenic | 45.0% | |
| TACAGTGTGTCACCCCTATA+AGG | + | chr4_2:43520527-43520546 | None:intergenic | 45.0% | |
| ! | GCGGACAAATATGGCAGTTT+TGG | + | chr4_2:43521787-43521806 | None:intergenic | 45.0% |
| GAAATGGCAGCGGACAAATA+TGG | + | chr4_2:43521796-43521815 | None:intergenic | 45.0% | |
| !!! | TCCAGGGGCACTTTTTATTC+GGG | + | chr4_2:43521826-43521845 | None:intergenic | 45.0% |
| !!! | CTCCAGGGGCACTTTTTATT+CGG | + | chr4_2:43521827-43521846 | None:intergenic | 45.0% |
| TGTTGTGTTAGAGACTCCAG+GGG | + | chr4_2:43521841-43521860 | None:intergenic | 45.0% | |
| GTGTTGTGTTAGAGACTCCA+GGG | + | chr4_2:43521842-43521861 | None:intergenic | 45.0% | |
| ATGGTTACGGTCATGGAACA+CGG | - | chr4_2:43521876-43521895 | Msa0601110:intron | 45.0% | |
| TCACCACAGGTTATGCAACA+CGG | + | chr4_2:43521976-43521995 | None:intergenic | 45.0% | |
| TGTTGCATAACCTGTGGTGA+AGG | - | chr4_2:43521976-43521995 | Msa0601110:intron | 45.0% | |
| !!! | GGAAAACGAAAGGCGTTTTC+TGG | - | chr4_2:43522004-43522023 | Msa0601110:intron | 45.0% |
| TGCATGACAACAATGGCAAG+AGG | + | chr4_2:43522098-43522117 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr4_2:43522306-43522325 | Msa0601110:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr4_2:43522307-43522326 | Msa0601110:intron | 45.0% |
| !!! | AGGGTTTTGGGGGTTTTGAA+GGG | + | chr4_2:43522506-43522525 | None:intergenic | 45.0% |
| !!! | AAGGGTTTTGGGGGTTTTGA+AGG | + | chr4_2:43522507-43522526 | None:intergenic | 45.0% |
| !! | GTATTGGAGAAGGGTTTTGG+GGG | + | chr4_2:43522516-43522535 | None:intergenic | 45.0% |
| TAGAGGAAAATGGGAGAGGA+GGG | + | chr4_2:43522602-43522621 | None:intergenic | 45.0% | |
| ATAGAGGAAAATGGGAGAGG+AGG | + | chr4_2:43522603-43522622 | None:intergenic | 45.0% | |
| GGAGCAAGTGGAAGAAATAG+AGG | + | chr4_2:43522619-43522638 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr4_2:43522672-43522691 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr4_2:43522673-43522692 | None:intergenic | 45.0% |
| TATGCCATGAGCAATGAAGC+AGG | + | chr4_2:43523131-43523150 | None:intergenic | 45.0% | |
| TACCAGATGTCTCTTTCGGT+CGG | + | chr4_2:43523463-43523482 | None:intergenic | 45.0% | |
| GTTCCAACGATGTTGGACTT+GGG | - | chr4_2:43523901-43523920 | Msa0601110:intron | 45.0% | |
| !! | GGTCGGCCTTATTTGTCAAA+TGG | - | chr4_2:43523922-43523941 | Msa0601110:intron | 45.0% |
| AGAAGAAGATGGCTCCTTCA+AGG | - | chr4_2:43524112-43524131 | Msa0601110:intron | 45.0% | |
| TGAGGGAAGGTTAACCTTGA+AGG | + | chr4_2:43524129-43524148 | None:intergenic | 45.0% | |
| ATCTTCCTTTGCCTCCAGAA+TGG | - | chr4_2:43524360-43524379 | Msa0601110:intron | 45.0% | |
| TCTTCCTTTGCCTCCAGAAT+GGG | - | chr4_2:43524361-43524380 | Msa0601110:intron | 45.0% | |
| !!! | TTAAATGTTAATTTTTTTTA+AGG | + | chr4_2:43521148-43521167 | None:intergenic | 5.0% |
| !!! | ATTTTTATTTTTATATTTAG+CGG | + | chr4_2:43522727-43522746 | None:intergenic | 5.0% |
| !! | TAAATATAAAAATAAAAATG+AGG | - | chr4_2:43522728-43522747 | Msa0601110:intron | 5.0% |
| !! | ATGTTAATTTATTTATTAAT+AGG | - | chr4_2:43523436-43523455 | Msa0601110:intron | 5.0% |
| AGATTCGAACCAACGACCTC+TGG | - | chr4_2:43517701-43517720 | Msa0601110:three_prime_UTR | 50.0% | |
| GGCCAGCCTAACAGATTAAG+AGG | - | chr4_2:43518384-43518403 | Msa0601110:intron | 50.0% | |
| GGCCTCTTAATCTGTTAGGC+TGG | + | chr4_2:43518389-43518408 | None:intergenic | 50.0% | |
| GCAACTCAAGCAAGGGCTTT+AGG | + | chr4_2:43518640-43518659 | None:intergenic | 50.0% | |
| ! | AAGCCCTTGCTTGAGTTGCT+TGG | - | chr4_2:43518641-43518660 | Msa0601110:intron | 50.0% |
| TTTGTTTGTCTCACCAGGGC+CGG | + | chr4_2:43518675-43518694 | None:intergenic | 50.0% | |
| GTATGTCCCTATCCCAACTG+CGG | + | chr4_2:43519258-43519277 | None:intergenic | 50.0% | |
| TAGCCCACGTAAGTGCACAA+AGG | - | chr4_2:43519297-43519316 | Msa0601110:intron | 50.0% | |
| GCATAACGGCTGACTACTTC+GGG | - | chr4_2:43519424-43519443 | Msa0601110:intron | 50.0% | |
| TCATGCCCGTAAGTGCAAGA+AGG | - | chr4_2:43519503-43519522 | Msa0601110:intron | 50.0% | |
| AAGCAGTCAGCCGTTATGCT+CGG | + | chr4_2:43519559-43519578 | None:intergenic | 50.0% | |
| GCATAACGGCTGACTGCTTT+CGG | - | chr4_2:43519560-43519579 | Msa0601110:intron | 50.0% | |
| GGGCTTGATAAGATGTCGGT+CGG | + | chr4_2:43519648-43519667 | None:intergenic | 50.0% | |
| ACCGACATCTTATCAAGCCC+TGG | - | chr4_2:43519648-43519667 | Msa0601110:intron | 50.0% | |
| GCCAGGGCTTGATAAGATGT+CGG | + | chr4_2:43519652-43519671 | None:intergenic | 50.0% | |
| !!! | GCCCTGGCCTTTTAGAGTAT+AGG | - | chr4_2:43519664-43519683 | Msa0601110:intron | 50.0% |
| TCTCTCTTCACTCTGCTGAG+GGG | + | chr4_2:43520225-43520244 | None:intergenic | 50.0% | |
| ! | GGCGTTGAGAGCAAAGATTG+TGG | + | chr4_2:43520343-43520362 | None:intergenic | 50.0% |
| GGAGAAGTTGAAGTCAGGTG+TGG | - | chr4_2:43520447-43520466 | Msa0601110:intron | 50.0% | |
| AGTTAGGGGACACACAACTG+AGG | - | chr4_2:43520735-43520754 | Msa0601110:intron | 50.0% | |
| GTTAGGGGACACACAACTGA+GGG | - | chr4_2:43520736-43520755 | Msa0601110:intron | 50.0% | |
| ATACTTTAGCTAGGTCGGCC+TGG | + | chr4_2:43521536-43521555 | None:intergenic | 50.0% | |
| GCTATATCGTCTCCAGGTCA+TGG | + | chr4_2:43521663-43521682 | None:intergenic | 50.0% | |
| TGACTTTGCTGCTCAAGTGC+AGG | + | chr4_2:43521685-43521704 | None:intergenic | 50.0% | |
| CGTGTTGTGTTAGAGACTCC+AGG | + | chr4_2:43521843-43521862 | None:intergenic | 50.0% | |
| CACGGGATGAATAGAGTGCA+AGG | + | chr4_2:43521958-43521977 | None:intergenic | 50.0% | |
| ATCCCGTGTTGCATAACCTG+TGG | - | chr4_2:43521970-43521989 | Msa0601110:intron | 50.0% | |
| CACCACAGGTTATGCAACAC+GGG | + | chr4_2:43521975-43521994 | None:intergenic | 50.0% | |
| TGCATAACCTGTGGTGAAGG+AGG | - | chr4_2:43521979-43521998 | Msa0601110:intron | 50.0% | |
| ATAACCTGTGGTGAAGGAGG+TGG | - | chr4_2:43521982-43522001 | Msa0601110:intron | 50.0% | |
| TAACCTGTGGTGAAGGAGGT+GGG | - | chr4_2:43521983-43522002 | Msa0601110:intron | 50.0% | |
| GAAGGAGGTGGGAAAACGAA+AGG | - | chr4_2:43521994-43522013 | Msa0601110:intron | 50.0% | |
| GGTGTGCCACAACGAAACAA+GGG | - | chr4_2:43522058-43522077 | Msa0601110:intron | 50.0% | |
| ! | CGCATTCCCTTGTTTCGTTG+TGG | + | chr4_2:43522067-43522086 | None:intergenic | 50.0% |
| GTGCAGCCCAAATTTGCCAA+AGG | - | chr4_2:43522182-43522201 | Msa0601110:intron | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr4_2:43522305-43522324 | Msa0601110:intron | 50.0% |
| AAATGGGAGAGGAGGGCTTT+GGG | + | chr4_2:43522595-43522614 | None:intergenic | 50.0% | |
| AAAATGGGAGAGGAGGGCTT+TGG | + | chr4_2:43522596-43522615 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr4_2:43522674-43522693 | None:intergenic | 50.0% |
| ACCAGATGTCTCTTTCGGTC+GGG | + | chr4_2:43523462-43523481 | None:intergenic | 50.0% | |
| GGTTCCAACGATGTTGGACT+TGG | - | chr4_2:43523900-43523919 | Msa0601110:intron | 50.0% | |
| CAACGATGTTGGACTTGGGT+CGG | - | chr4_2:43523905-43523924 | Msa0601110:intron | 50.0% | |
| CTTCCTTTGCCTCCAGAATG+GGG | - | chr4_2:43524362-43524381 | Msa0601110:intron | 50.0% | |
| ! | AAACCCCATTCTGGAGGCAA+AGG | + | chr4_2:43524368-43524387 | None:intergenic | 50.0% |
| TTTGCCTCCAGAATGGGGTT+TGG | - | chr4_2:43524367-43524386 | Msa0601110:intron | 50.0% | |
| !! | GTGATGGCGGTCATCATGTC+TGG | + | chr4_2:43517599-43517618 | None:intergenic | 55.0% |
| CACATGGCCAGCCTAACAGA+TGG | - | chr4_2:43518344-43518363 | Msa0601110:intron | 55.0% | |
| GGGCCAAGCAACTCAAGCAA+GGG | + | chr4_2:43518647-43518666 | None:intergenic | 55.0% | |
| AGGGCCAAGCAACTCAAGCA+AGG | + | chr4_2:43518648-43518667 | None:intergenic | 55.0% | |
| ! | GCTTGAGTTGCTTGGCCCTT+AGG | - | chr4_2:43518649-43518668 | Msa0601110:intron | 55.0% |
| GGCCCTGGTGAGACAAACAA+AGG | - | chr4_2:43518674-43518693 | Msa0601110:intron | 55.0% | |
| ! | TTGTCATCGGTTGGCACCGT+TGG | + | chr4_2:43519074-43519093 | None:intergenic | 55.0% |
| CATCTGGTCTGGTCTGGTCA+TGG | - | chr4_2:43519142-43519161 | Msa0601110:CDS | 55.0% | |
| AGTTGGCAGTTGCCGCAGTT+GGG | - | chr4_2:43519243-43519262 | Msa0601110:intron | 55.0% | |
| CAGTTGCCGCAGTTGGGATA+GGG | - | chr4_2:43519249-43519268 | Msa0601110:intron | 55.0% | |
| AGGTCGTACCCGTATCGCTA+TGG | - | chr4_2:43519523-43519542 | Msa0601110:intron | 55.0% | |
| GGTCGTACCCGTATCGCTAT+GGG | - | chr4_2:43519524-43519543 | Msa0601110:intron | 55.0% | |
| ! | TCGGTTTGCAAATGGGGGCA+AGG | - | chr4_2:43519579-43519598 | Msa0601110:intron | 55.0% |
| !! | CTCTCTTGGTAGTGGGATCG+TGG | + | chr4_2:43520477-43520496 | None:intergenic | 55.0% |
| ACGGTGACTAACCCAAGACC+AGG | - | chr4_2:43521515-43521534 | Msa0601110:intron | 55.0% | |
| GTGCAGGCTATATCGTCTCC+AGG | + | chr4_2:43521669-43521688 | None:intergenic | 55.0% | |
| !!! | TATGGCAGTTTTGGAGGGGG+AGG | + | chr4_2:43521778-43521797 | None:intergenic | 55.0% |
| GGGCTCAAACGAAATGGCAG+CGG | + | chr4_2:43521806-43521825 | None:intergenic | 55.0% | |
| !! | GCCCGAATAAAAAGTGCCCC+TGG | - | chr4_2:43521822-43521841 | Msa0601110:intron | 55.0% |
| AGGAGAAATCGAGCGAGACG+TGG | + | chr4_2:43521921-43521940 | None:intergenic | 55.0% | |
| TTTCCCACCTCCTTCACCAC+AGG | + | chr4_2:43521989-43522008 | None:intergenic | 55.0% | |
| ! | TTTCTGGTCCCCCTATTCGC+CGG | - | chr4_2:43522020-43522039 | Msa0601110:intron | 55.0% |
| GGGTGTGCCACAACGAAACA+AGG | - | chr4_2:43522057-43522076 | Msa0601110:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | - | chr4_2:43522311-43522330 | Msa0601110:intron | 55.0% | |
| GGAGTTTGGAGGGGAAGGAA+AGG | - | chr4_2:43522316-43522335 | Msa0601110:intron | 55.0% | |
| AATGGGAGAGGAGGGCTTTG+GGG | + | chr4_2:43522594-43522613 | None:intergenic | 55.0% | |
| GAGTTTGGAGGGGAAGAGAG+GGG | + | chr4_2:43522662-43522681 | None:intergenic | 55.0% | |
| CGAGTTTGGAGGGGAAGAGA+GGG | + | chr4_2:43522663-43522682 | None:intergenic | 55.0% | |
| CGACCCAAGTCCAACATCGT+TGG | + | chr4_2:43523907-43523926 | None:intergenic | 55.0% | |
| CTAGGTGCCAAACCCCATTC+TGG | + | chr4_2:43524377-43524396 | None:intergenic | 55.0% | |
| GAGTTGCTTGGCCCTTAGGC+CGG | - | chr4_2:43518653-43518672 | Msa0601110:intron | 60.0% | |
| GAGTTGGCAGTTGCCGCAGT+TGG | - | chr4_2:43519242-43519261 | Msa0601110:intron | 60.0% | |
| GCAGTTGCCGCAGTTGGGAT+AGG | - | chr4_2:43519248-43519267 | Msa0601110:intron | 60.0% | |
| ! | CGGGTTTGCAAAGGGGTGCA+AGG | - | chr4_2:43519443-43519462 | Msa0601110:intron | 60.0% |
| ! | AGCTAGGTCGGCCTGGTCTT+GGG | + | chr4_2:43521529-43521548 | None:intergenic | 60.0% |
| TAGCTAGGTCGGCCTGGTCT+TGG | + | chr4_2:43521530-43521549 | None:intergenic | 60.0% | |
| TTCTGGTCCCCCTATTCGCC+GGG | - | chr4_2:43522021-43522040 | Msa0601110:intron | 60.0% | |
| ! | ATGGGAGAGGAGGGCTTTGG+GGG | + | chr4_2:43522593-43522612 | None:intergenic | 60.0% |
| GGGAAGAGAGGGGAAGGCTT+GGG | + | chr4_2:43522652-43522671 | None:intergenic | 60.0% | |
| TTGGAGGGGAAGAGAGGGGA+AGG | + | chr4_2:43522658-43522677 | None:intergenic | 60.0% | |
| GCGAGTTTGGAGGGGAAGAG+AGG | + | chr4_2:43522664-43522683 | None:intergenic | 60.0% | |
| GCCCGACCGAAAGAGACATC+TGG | - | chr4_2:43523458-43523477 | Msa0601110:intron | 60.0% | |
| GGTGCCAAACCCCATTCTGG+AGG | + | chr4_2:43524374-43524393 | None:intergenic | 60.0% | |
| TCTCACCAGGGCCGGCCTAA+GGG | + | chr4_2:43518667-43518686 | None:intergenic | 65.0% | |
| TCTGGTCCCCCTATTCGCCG+GGG | - | chr4_2:43522022-43522041 | Msa0601110:intron | 65.0% | |
| AAGCACCCCCCGGCGAATAG+GGG | + | chr4_2:43522032-43522051 | None:intergenic | 65.0% | |
| CAAGCACCCCCCGGCGAATA+GGG | + | chr4_2:43522033-43522052 | None:intergenic | 65.0% | |
| ACAAGCACCCCCCGGCGAAT+AGG | + | chr4_2:43522034-43522053 | None:intergenic | 65.0% | |
| !! | TATTCGCCGGGGGGTGCTTG+TGG | - | chr4_2:43522033-43522052 | Msa0601110:intron | 65.0% |
| !! | ATTCGCCGGGGGGTGCTTGT+GGG | - | chr4_2:43522034-43522053 | Msa0601110:intron | 65.0% |
| !! | TGGGAGAGGAGGGCTTTGGG+GGG | + | chr4_2:43522592-43522611 | None:intergenic | 65.0% |
| GGGGAAGAGAGGGGAAGGCT+TGG | + | chr4_2:43522653-43522672 | None:intergenic | 65.0% | |
| GTCTCACCAGGGCCGGCCTA+AGG | + | chr4_2:43518668-43518687 | None:intergenic | 70.0% | |
| CTGGTCCCCCTATTCGCCGG+GGG | - | chr4_2:43522023-43522042 | Msa0601110:intron | 70.0% | |
| TGGTCCCCCTATTCGCCGGG+GGG | - | chr4_2:43522024-43522043 | Msa0601110:intron | 70.0% | |
| AGCACCCCCCGGCGAATAGG+GGG | + | chr4_2:43522031-43522050 | None:intergenic | 70.0% | |
| !! | TTCGCCGGGGGGTGCTTGTG+GGG | - | chr4_2:43522035-43522054 | Msa0601110:intron | 70.0% |
| CTTGGCCCTTAGGCCGGCCC+TGG | - | chr4_2:43518659-43518678 | Msa0601110:intron | 75.0% | |
| !! | TCGCCGGGGGGTGCTTGTGG+GGG | - | chr4_2:43522036-43522055 | Msa0601110:intron | 75.0% |
| CACCCCCCACAAGCACCCCC+CGG | + | chr4_2:43522042-43522061 | None:intergenic | 75.0% | |
| !!! | CGCCGGGGGGTGCTTGTGGG+GGG | - | chr4_2:43522037-43522056 | Msa0601110:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 43517566 | 43524722 | 43517566 | ID=Msa0601110;Name=Msa0601110 |
| chr4_2 | mRNA | 43517566 | 43524722 | 43517566 | ID=Msa0601110-mRNA-1;Parent=Msa0601110;Name=Msa0601110-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.33|0.25|0.5|1|1|4|283|242 |
| chr4_2 | exon | 43517566 | 43518231 | 43517566 | ID=Msa0601110-mRNA-1:exon:9524;Parent=Msa0601110-mRNA-1 |
| chr4_2 | exon | 43519016 | 43519166 | 43519016 | ID=Msa0601110-mRNA-1:exon:9523;Parent=Msa0601110-mRNA-1 |
| chr4_2 | exon | 43522984 | 43523046 | 43522984 | ID=Msa0601110-mRNA-1:exon:9522;Parent=Msa0601110-mRNA-1 |
| chr4_2 | exon | 43524591 | 43524722 | 43524591 | ID=Msa0601110-mRNA-1:exon:9521;Parent=Msa0601110-mRNA-1 |
| chr4_2 | CDS | 43524591 | 43524722 | 43524591 | ID=Msa0601110-mRNA-1:cds;Parent=Msa0601110-mRNA-1 |
| chr4_2 | CDS | 43522984 | 43523046 | 43522984 | ID=Msa0601110-mRNA-1:cds;Parent=Msa0601110-mRNA-1 |
| chr4_2 | CDS | 43519016 | 43519166 | 43519016 | ID=Msa0601110-mRNA-1:cds;Parent=Msa0601110-mRNA-1 |
| chr4_2 | CDS | 43517849 | 43518231 | 43517849 | ID=Msa0601110-mRNA-1:cds;Parent=Msa0601110-mRNA-1 |
| chr4_2 | three_prime_UTR | 43517566 | 43517848 | 43517566 | ID=Msa0601110-mRNA-1:three_prime_utr;Parent=Msa0601110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
