Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537270 | XP_013455085.1 | 87.330 | 221 | 1 | 1 | 1 | 194 | 1 | 221 | 1.65e-137 | 393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537270 | sp|O22152|YAB1_ARATH | 60.664 | 211 | 48 | 7 | 19 | 194 | 19 | 229 | 1.56e-77 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537270 | A0A072UJ49 | 87.330 | 221 | 1 | 1 | 1 | 194 | 1 | 221 | 7.88e-138 | 393 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0537270 | TF | C2C2-YABBY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0537270 | 0.820302 | 7.368589e-53 | -8.615850e-47 |
| Msa0006870 | Msa0537270 | 0.822463 | 2.337172e-53 | -8.615850e-47 |
| Msa0017120 | Msa0537270 | 0.813402 | 2.606162e-51 | -8.615850e-47 |
| Msa0018220 | Msa0537270 | 0.824334 | 8.537766e-54 | -8.615850e-47 |
| Msa0041540 | Msa0537270 | 0.834574 | 2.770862e-56 | -8.615850e-47 |
| Msa0043680 | Msa0537270 | 0.805024 | 1.630035e-49 | -8.615850e-47 |
| Msa0052020 | Msa0537270 | 0.816909 | 4.337365e-52 | -8.615850e-47 |
| Msa0052460 | Msa0537270 | 0.807421 | 5.096937e-50 | -8.615850e-47 |
| Msa0053110 | Msa0537270 | 0.809340 | 1.985566e-50 | -8.615850e-47 |
| Msa0077410 | Msa0537270 | 0.826104 | 3.257188e-54 | -8.615850e-47 |
| Msa0092660 | Msa0537270 | 0.825392 | 4.805333e-54 | -8.615850e-47 |
| Msa0092710 | Msa0537270 | 0.803064 | 4.165855e-49 | -8.615850e-47 |
| Msa0092730 | Msa0537270 | 0.825798 | 3.851310e-54 | -8.615850e-47 |
| Msa0097050 | Msa0537270 | 0.826858 | 2.153435e-54 | -8.615850e-47 |
| Msa0100570 | Msa0537270 | 0.828109 | 1.079079e-54 | -8.615850e-47 |
| Msa0100860 | Msa0537270 | 0.826141 | 3.193228e-54 | -8.615850e-47 |
| Msa0103780 | Msa0537270 | 0.807118 | 5.909432e-50 | -8.615850e-47 |
| Msa0134040 | Msa0537270 | 0.822719 | 2.038012e-53 | -8.615850e-47 |
| Msa0135980 | Msa0537270 | 0.830804 | 2.389851e-55 | -8.615850e-47 |
| Msa0137600 | Msa0537270 | 0.815807 | 7.652456e-52 | -8.615850e-47 |
| Msa0139900 | Msa0537270 | 0.831611 | 1.513566e-55 | -8.615850e-47 |
| Msa0141670 | Msa0537270 | 0.802025 | 6.821602e-49 | -8.615850e-47 |
| Msa0141830 | Msa0537270 | 0.804661 | 1.940334e-49 | -8.615850e-47 |
| Msa0143970 | Msa0537270 | 0.808473 | 3.044663e-50 | -8.615850e-47 |
| Msa0146470 | Msa0537270 | 0.806505 | 7.963735e-50 | -8.615850e-47 |
| Msa0150210 | Msa0537270 | 0.814709 | 1.341671e-51 | -8.615850e-47 |
| Msa0157020 | Msa0537270 | 0.818720 | 1.691514e-52 | -8.615850e-47 |
| Msa0181090 | Msa0537270 | 0.805959 | 1.037530e-49 | -8.615850e-47 |
| Msa0182270 | Msa0537270 | 0.803781 | 2.959541e-49 | -8.615850e-47 |
| Msa0203520 | Msa0537270 | 0.824333 | 8.542300e-54 | -8.615850e-47 |
| Msa0206080 | Msa0537270 | 0.801332 | 9.466221e-49 | -8.615850e-47 |
| Msa0206120 | Msa0537270 | 0.801786 | 7.640184e-49 | -8.615850e-47 |
| Msa0207180 | Msa0537270 | 0.801234 | 9.913620e-49 | -8.615850e-47 |
| Msa0223390 | Msa0537270 | 0.802483 | 5.490705e-49 | -8.615850e-47 |
| Msa0230400 | Msa0537270 | 0.817142 | 3.844816e-52 | -8.615850e-47 |
| Msa0367370 | Msa0537270 | 0.823520 | 1.325083e-53 | -8.615850e-47 |
| Msa0370600 | Msa0537270 | 0.845882 | 3.076689e-59 | -8.615850e-47 |
| Msa0379110 | Msa0537270 | 0.800220 | 1.596174e-48 | -8.615850e-47 |
| Msa0380060 | Msa0537270 | 0.821088 | 4.861836e-53 | -8.615850e-47 |
| Msa0382290 | Msa0537270 | 0.812085 | 5.062000e-51 | -8.615850e-47 |
| Msa0382560 | Msa0537270 | 0.806615 | 7.546247e-50 | -8.615850e-47 |
| Msa0398590 | Msa0537270 | 0.854179 | 1.462351e-61 | -8.615850e-47 |
| Msa0408640 | Msa0537270 | 0.846374 | 2.260644e-59 | -8.615850e-47 |
| Msa0415930 | Msa0537270 | 0.815120 | 1.088115e-51 | -8.615850e-47 |
| Msa0417630 | Msa0537270 | 0.818403 | 1.996105e-52 | -8.615850e-47 |
| Msa0418200 | Msa0537270 | 0.843092 | 1.732796e-58 | -8.615850e-47 |
| Msa0418480 | Msa0537270 | 0.825691 | 4.083778e-54 | -8.615850e-47 |
| Msa0429270 | Msa0537270 | 0.830310 | 3.156777e-55 | -8.615850e-47 |
| Msa0429530 | Msa0537270 | -0.805852 | 1.092891e-49 | -8.615850e-47 |
| Msa0431800 | Msa0537270 | 0.809734 | 1.634659e-50 | -8.615850e-47 |
| Msa0436450 | Msa0537270 | 0.817565 | 3.087178e-52 | -8.615850e-47 |
| Msa0439780 | Msa0537270 | 0.800003 | 1.766574e-48 | -8.615850e-47 |
| Msa0457870 | Msa0537270 | 0.850134 | 2.066960e-60 | -8.615850e-47 |
| Msa0464540 | Msa0537270 | 0.845593 | 3.687873e-59 | -8.615850e-47 |
| Msa0465860 | Msa0537270 | 0.816942 | 4.262091e-52 | -8.615850e-47 |
| Msa0480150 | Msa0537270 | 0.808170 | 3.531973e-50 | -8.615850e-47 |
| Msa0246690 | Msa0537270 | 0.804086 | 2.557832e-49 | -8.615850e-47 |
| Msa0249270 | Msa0537270 | 0.818438 | 1.960208e-52 | -8.615850e-47 |
| Msa0257310 | Msa0537270 | 0.823366 | 1.439707e-53 | -8.615850e-47 |
| Msa0260970 | Msa0537270 | 0.803043 | 4.207528e-49 | -8.615850e-47 |
| Msa0274780 | Msa0537270 | 0.814320 | 1.636393e-51 | -8.615850e-47 |
| Msa0296610 | Msa0537270 | 0.806927 | 6.483954e-50 | -8.615850e-47 |
| Msa0315480 | Msa0537270 | 0.806101 | 9.686133e-50 | -8.615850e-47 |
| Msa0351510 | Msa0537270 | 0.835572 | 1.551707e-56 | -8.615850e-47 |
| Msa0358230 | Msa0537270 | 0.822610 | 2.160689e-53 | -8.615850e-47 |
| Msa0361260 | Msa0537270 | 0.846704 | 1.837448e-59 | -8.615850e-47 |
| Msa0508400 | Msa0537270 | 0.819561 | 1.088515e-52 | -8.615850e-47 |
| Msa0510230 | Msa0537270 | 0.836855 | 7.324783e-57 | -8.615850e-47 |
| Msa0519200 | Msa0537270 | 0.831808 | 1.353429e-55 | -8.615850e-47 |
| Msa0524210 | Msa0537270 | 0.871908 | 4.772210e-67 | -8.615850e-47 |
| Msa0526130 | Msa0537270 | 0.836089 | 1.148146e-56 | -8.615850e-47 |
| Msa0528940 | Msa0537270 | 0.811830 | 5.753064e-51 | -8.615850e-47 |
| Msa0532840 | Msa0537270 | 0.818902 | 1.538488e-52 | -8.615850e-47 |
| Msa0533010 | Msa0537270 | 0.815245 | 1.020706e-51 | -8.615850e-47 |
| Msa0537270 | Msa0538570 | 0.847744 | 9.528719e-60 | -8.615850e-47 |
| Msa0537270 | Msa0543850 | 0.832540 | 8.917320e-56 | -8.615850e-47 |
| Msa0537270 | Msa0546740 | 0.800871 | 1.176062e-48 | -8.615850e-47 |
| Msa0537270 | Msa0547050 | 0.817698 | 2.880886e-52 | -8.615850e-47 |
| Msa0537270 | Msa0561510 | 0.818568 | 1.831859e-52 | -8.615850e-47 |
| Msa0537270 | Msa0567290 | 0.813689 | 2.254518e-51 | -8.615850e-47 |
| Msa0537270 | Msa0593710 | 0.974303 | 6.421944e-138 | -8.615850e-47 |
| Msa0537270 | Msa0594390 | 0.847638 | 1.019081e-59 | -8.615850e-47 |
| Msa0537270 | Msa0600390 | 0.812737 | 3.646548e-51 | -8.615850e-47 |
| Msa0537270 | Msa0601110 | 0.875692 | 2.521729e-68 | -8.615850e-47 |
| Msa0537270 | Msa0601120 | 0.872675 | 2.650182e-67 | -8.615850e-47 |
| Msa0537270 | Msa0619330 | 0.807745 | 4.349165e-50 | -8.615850e-47 |
| Msa0537270 | Msa0633750 | 0.934058 | 7.262923e-96 | -8.615850e-47 |
| Msa0537270 | Msa0634270 | 0.837383 | 5.369594e-57 | -8.615850e-47 |
| Msa0537270 | Msa0640390 | 0.815710 | 8.040682e-52 | -8.615850e-47 |
| Msa0537270 | Msa0640880 | 0.815649 | 8.297037e-52 | -8.615850e-47 |
| Msa0537270 | Msa0641620 | 0.883761 | 3.411435e-71 | -8.615850e-47 |
| Msa0537270 | Msa0642650 | 0.807071 | 6.045848e-50 | -8.615850e-47 |
| Msa0537270 | Msa0643800 | 0.804793 | 1.821847e-49 | -8.615850e-47 |
| Msa0537270 | Msa0667970 | 0.802624 | 5.136021e-49 | -8.615850e-47 |
| Msa0537270 | Msa0672110 | 0.856965 | 2.252126e-62 | -8.615850e-47 |
| Msa0537270 | Msa0678890 | 0.836047 | 1.176539e-56 | -8.615850e-47 |
| Msa0537270 | Msa0680150 | 0.858255 | 9.341987e-63 | -8.615850e-47 |
| Msa0537270 | Msa0681890 | 0.843527 | 1.326302e-58 | -8.615850e-47 |
| Msa0537270 | Msa0683650 | 0.801227 | 9.947786e-49 | -8.615850e-47 |
| Msa0537270 | Msa0685690 | 0.817606 | 3.023071e-52 | -8.615850e-47 |
| Msa0537270 | Msa0700910 | 0.817529 | 3.144846e-52 | -8.615850e-47 |
| Msa0537270 | Msa0703760 | 0.830363 | 3.063632e-55 | -8.615850e-47 |
| Msa0537270 | Msa0706580 | 0.816289 | 5.971310e-52 | -8.615850e-47 |
| Msa0537270 | Msa0722940 | 0.881812 | 1.758274e-70 | -8.615850e-47 |
| Msa0537270 | Msa0723150 | 0.882039 | 1.455125e-70 | -8.615850e-47 |
| Msa0537270 | Msa0730180 | 0.819628 | 1.051287e-52 | -8.615850e-47 |
| Msa0537270 | Msa0747780 | 0.805689 | 1.182303e-49 | -8.615850e-47 |
| Msa0537270 | Msa0761580 | 0.820119 | 8.118656e-53 | -8.615850e-47 |
| Msa0537270 | Msa0799210 | 0.805911 | 1.062001e-49 | -8.615850e-47 |
| Msa0537270 | Msa0802500 | 0.813609 | 2.347659e-51 | -8.615850e-47 |
| Msa0537270 | Msa0803130 | 0.821269 | 4.417413e-53 | -8.615850e-47 |
| Msa0537270 | Msa0804110 | 0.821737 | 3.443839e-53 | -8.615850e-47 |
| Msa0537270 | Msa0841490 | 0.818653 | 1.752072e-52 | -8.615850e-47 |
| Msa0537270 | Msa0843290 | 0.840894 | 6.604744e-58 | -8.615850e-47 |
| Msa0537270 | Msa0872310 | 0.808131 | 3.600304e-50 | -8.615850e-47 |
| Msa0537270 | Msa0873190 | 0.811768 | 5.935148e-51 | -8.615850e-47 |
| Msa0537270 | Msa0886880 | 0.803483 | 3.411786e-49 | -8.615850e-47 |
| Msa0537270 | Msa0890250 | 0.802260 | 6.104042e-49 | -8.615850e-47 |
| Msa0537270 | Msa0905550 | 0.805818 | 1.110672e-49 | -8.615850e-47 |
| Msa0537270 | Msa0925160 | 0.807544 | 4.798959e-50 | -8.615850e-47 |
| Msa0537270 | Msa0930330 | 0.818176 | 2.246899e-52 | -8.615850e-47 |
| Msa0537270 | Msa0931480 | 0.849511 | 3.085227e-60 | -8.615850e-47 |
| Msa0537270 | Msa0937550 | 0.803129 | 4.039759e-49 | -8.615850e-47 |
| Msa0537270 | Msa0938430 | 0.838730 | 2.417165e-57 | -8.615850e-47 |
| Msa0537270 | Msa0951460 | 0.810601 | 1.063093e-50 | -8.615850e-47 |
| Msa0537270 | Msa0951960 | 0.801363 | 9.326463e-49 | -8.615850e-47 |
| Msa0537270 | Msa0955260 | 0.822989 | 1.763507e-53 | -8.615850e-47 |
| Msa0537270 | Msa0972730 | 0.805849 | 1.094141e-49 | -8.615850e-47 |
| Msa0537270 | Msa0974750 | 0.817526 | 3.150133e-52 | -8.615850e-47 |
| Msa0537270 | Msa0975580 | 0.806498 | 7.991437e-50 | -8.615850e-47 |
| Msa0537270 | Msa0990520 | 0.809222 | 2.105079e-50 | -8.615850e-47 |
| Msa0537270 | Msa0992570 | 0.800031 | 1.744176e-48 | -8.615850e-47 |
| Msa0537270 | Msa1004500 | 0.821864 | 3.218035e-53 | -8.615850e-47 |
| Msa0537270 | Msa1004520 | 0.820283 | 7.442361e-53 | -8.615850e-47 |
| Msa0537270 | Msa1014270 | 0.822867 | 1.882337e-53 | -8.615850e-47 |
| Msa0537270 | Msa1027790 | 0.839006 | 2.050454e-57 | -8.615850e-47 |
| Msa0537270 | Msa1028460 | 0.814123 | 1.808646e-51 | -8.615850e-47 |
| Msa0537270 | Msa1041530 | 0.807549 | 4.788796e-50 | -8.615850e-47 |
| Msa0537270 | Msa1045970 | 0.803060 | 4.174159e-49 | -8.615850e-47 |
| Msa0537270 | Msa1046870 | 0.826986 | 2.006737e-54 | -8.615850e-47 |
| Msa0537270 | Msa1055260 | 0.806998 | 6.263941e-50 | -8.615850e-47 |
| Msa0537270 | Msa1061180 | 0.812093 | 5.043427e-51 | -8.615850e-47 |
| Msa0537270 | Msa1072080 | 0.821964 | 3.050620e-53 | -8.615850e-47 |
| Msa0537270 | Msa1081570 | 0.802488 | 5.479593e-49 | -8.615850e-47 |
| Msa0537270 | Msa1084150 | 0.807116 | 5.914716e-50 | -8.615850e-47 |
| Msa0537270 | Msa1106560 | 0.837939 | 3.864972e-57 | -8.615850e-47 |
| Msa0537270 | Msa1106580 | 0.828955 | 6.741294e-55 | -8.615850e-47 |
| Msa0537270 | Msa1112610 | 0.840630 | 7.746775e-58 | -8.615850e-47 |
| Msa0537270 | Msa1127140 | 0.810165 | 1.319855e-50 | -8.615850e-47 |
| Msa0537270 | Msa1134400 | 0.813992 | 1.932444e-51 | -8.615850e-47 |
| Msa0537270 | Msa1159100 | 0.820290 | 7.416487e-53 | -8.615850e-47 |
| Msa0537270 | Msa1171340 | 0.802268 | 6.082201e-49 | -8.615850e-47 |
| Msa0537270 | Msa1175750 | 0.803719 | 3.047778e-49 | -8.615850e-47 |
| Msa0537270 | Msa1183390 | 0.814579 | 1.433687e-51 | -8.615850e-47 |
| Msa0537270 | Msa1183610 | 0.814964 | 1.178147e-51 | -8.615850e-47 |
| Msa0537270 | Msa1190910 | 0.801056 | 1.078097e-48 | -8.615850e-47 |
| Msa0537270 | Msa1197110 | 0.809269 | 2.056814e-50 | -8.615850e-47 |
| Msa0537270 | Msa1200920 | 0.828422 | 9.069112e-55 | -8.615850e-47 |
| Msa0537270 | Msa1232860 | 0.818745 | 1.669826e-52 | -8.615850e-47 |
| Msa0537270 | Msa1241680 | 0.832247 | 1.054305e-55 | -8.615850e-47 |
| Msa0537270 | Msa1257730 | 0.808569 | 2.903645e-50 | -8.615850e-47 |
| Msa0537270 | Msa1258810 | 0.812325 | 4.488074e-51 | -8.615850e-47 |
| Msa0537270 | Msa1271510 | 0.820830 | 5.575003e-53 | -8.615850e-47 |
| Msa0537270 | Msa1271600 | 0.807411 | 5.121724e-50 | -8.615850e-47 |
| Msa0537270 | Msa1272330 | 0.828647 | 8.001708e-55 | -8.615850e-47 |
| Msa0537270 | Msa1281720 | 0.803535 | 3.328274e-49 | -8.615850e-47 |
| Msa0537270 | Msa1293530 | 0.804592 | 2.006278e-49 | -8.615850e-47 |
| Msa0537270 | Msa1302150 | 0.808305 | 3.305410e-50 | -8.615850e-47 |
| Msa0537270 | Msa1307370 | 0.803746 | 3.009713e-49 | -8.615850e-47 |
| Msa0537270 | Msa1312730 | 0.803150 | 3.999013e-49 | -8.615850e-47 |
| Msa0537270 | Msa1315980 | 0.807789 | 4.256866e-50 | -8.615850e-47 |
| Msa0537270 | Msa1321000 | 0.804367 | 2.234965e-49 | -8.615850e-47 |
| Msa0537270 | Msa1350670 | 0.824955 | 6.095754e-54 | -8.615850e-47 |
| Msa0537270 | Msa1355400 | 0.850965 | 1.207239e-60 | -8.615850e-47 |
| Msa0537270 | Msa1365020 | 0.846111 | 2.667230e-59 | -8.615850e-47 |
| Msa0537270 | Msa1365870 | 0.806026 | 1.004327e-49 | -8.615850e-47 |
| Msa0537270 | Msa1367410 | 0.871540 | 6.323571e-67 | -8.615850e-47 |
| Msa0537270 | Msa1379980 | 0.815048 | 1.128867e-51 | -8.615850e-47 |
| Msa0537270 | Msa1398840 | 0.801196 | 1.009050e-48 | -8.615850e-47 |
| Msa0537270 | Msa1405770 | 0.831069 | 2.057263e-55 | -8.615850e-47 |
| Msa0537270 | Msa1407710 | 0.807235 | 5.581574e-50 | -8.615850e-47 |
| Msa0537270 | Msa1417650 | 0.873475 | 1.428780e-67 | -8.615850e-47 |
| Msa0537270 | Msa1420060 | 0.803354 | 3.628185e-49 | -8.615850e-47 |
| Msa0537270 | Msa1421810 | 0.832670 | 8.281379e-56 | -8.615850e-47 |
| Msa0537270 | Msa1434020 | 0.830669 | 2.578143e-55 | -8.615850e-47 |
| Msa0537270 | Msa1435040 | 0.802585 | 5.232142e-49 | -8.615850e-47 |
| Msa0537270 | Msa1435050 | 0.825340 | 4.943865e-54 | -8.615850e-47 |
| Msa0537270 | Msa1435670 | 0.817238 | 3.657754e-52 | -8.615850e-47 |
| Msa0537270 | Msa1439670 | 0.829966 | 3.828882e-55 | -8.615850e-47 |
| Msa0537270 | Msa1439680 | 0.823075 | 1.683537e-53 | -8.615850e-47 |
| Msa0537270 | Msa1444450 | 0.800106 | 1.683769e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537270 | MtrunA17_Chr4g0011841 | 87.330 | 221 | 1 | 1 | 1 | 194 | 1 | 221 | 1.52e-141 | 393 |
| Msa0537270 | MtrunA17_Chr4g0056521 | 62.019 | 208 | 46 | 5 | 18 | 194 | 13 | 218 | 3.09e-73 | 220 |
| Msa0537270 | MtrunA17_Chr4g0063931 | 53.672 | 177 | 61 | 3 | 20 | 179 | 11 | 183 | 2.32e-58 | 181 |
| Msa0537270 | MtrunA17_Chr2g0322221 | 50.000 | 192 | 66 | 6 | 19 | 184 | 8 | 195 | 7.56e-55 | 172 |
| Msa0537270 | MtrunA17_Chr4g0025361 | 53.896 | 154 | 55 | 2 | 19 | 157 | 5 | 157 | 1.04e-49 | 159 |
| Msa0537270 | MtrunA17_Chr5g0413381 | 49.007 | 151 | 56 | 2 | 23 | 152 | 12 | 162 | 2.02e-42 | 141 |
| Msa0537270 | MtrunA17_Chr5g0419871 | 50.000 | 142 | 60 | 3 | 21 | 151 | 14 | 155 | 1.95e-38 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537270 | AT2G45190.1 | 60.664 | 211 | 48 | 7 | 19 | 194 | 19 | 229 | 1.59e-78 | 234 |
| Msa0537270 | AT4G00180.1 | 57.576 | 231 | 47 | 8 | 8 | 192 | 13 | 238 | 4.74e-71 | 216 |
| Msa0537270 | AT4G00180.2 | 56.039 | 207 | 45 | 7 | 32 | 192 | 1 | 207 | 2.67e-58 | 182 |
| Msa0537270 | AT2G45190.2 | 64.384 | 146 | 33 | 5 | 61 | 194 | 27 | 165 | 1.62e-55 | 174 |
| Msa0537270 | AT1G08465.1 | 57.595 | 158 | 48 | 3 | 22 | 161 | 7 | 163 | 3.17e-55 | 173 |
| Msa0537270 | AT2G26580.2 | 56.774 | 155 | 46 | 3 | 22 | 161 | 8 | 156 | 3.88e-55 | 172 |
| Msa0537270 | AT2G26580.1 | 56.774 | 155 | 46 | 3 | 22 | 161 | 8 | 156 | 3.88e-55 | 172 |
| Msa0537270 | AT1G23420.1 | 42.857 | 161 | 63 | 2 | 24 | 155 | 20 | 180 | 3.92e-35 | 124 |
| Msa0537270 | AT1G23420.2 | 42.857 | 161 | 63 | 2 | 24 | 155 | 51 | 211 | 1.24e-34 | 123 |
| Msa0537270 | AT1G69180.1 | 41.096 | 146 | 63 | 3 | 22 | 151 | 18 | 156 | 3.18e-32 | 115 |
Find 67 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCAAGTTGTTGGTTTA+TGG | 0.128435 | 4_1:+15285660 | Msa0537270:three_prime_UTR |
| CTATTAGCAGGTGGAGGTTT+AGG | 0.195251 | 4_1:-15283079 | None:intergenic |
| CGATGCTACTTAAGTATTAA+AGG | 0.214516 | 4_1:-15281989 | None:intergenic |
| ATCATCAAATCATTTGGATT+TGG | 0.277959 | 4_1:-15283022 | None:intergenic |
| CACTTTCCACACATTCATTT+CGG | 0.297543 | 4_1:+15285247 | Msa0537270:CDS |
| AGAGTTGTTGCTGTTGTTGC+TGG | 0.315337 | 4_1:-15282271 | None:intergenic |
| AAAGAAGGAAAAGACTTTCT+AGG | 0.330189 | 4_1:+15281956 | Msa0537270:five_prime_UTR |
| TATTAGCAGGTGGAGGTTTA+GGG | 0.330394 | 4_1:-15283078 | None:intergenic |
| GCCTCTCTGTGGCTTATATC+AGG | 0.334060 | 4_1:-15285015 | None:intergenic |
| GACTGATCAGTGAAGTTTCT+TGG | 0.340647 | 4_1:-15282130 | None:intergenic |
| TTCTTCACGGGTTGATGATC+AGG | 0.349751 | 4_1:-15285277 | None:intergenic |
| GTGTTCATCATCAAATCATT+TGG | 0.376681 | 4_1:-15283028 | None:intergenic |
| TTACTTGATGAAGCGGTTGT+AGG | 0.396976 | 4_1:-15284082 | None:intergenic |
| TGATTGTTAAGTTACTGTTT+AGG | 0.410029 | 4_1:-15282054 | None:intergenic |
| TGTTGCTGTTGTTGCTGGTC+CGG | 0.423782 | 4_1:-15282266 | None:intergenic |
| GAGGACGTGCTTATGAAAGA+TGG | 0.432558 | 4_1:+15285469 | Msa0537270:CDS |
| GGAGATAAATATGAAAGAAA+AGG | 0.454485 | 4_1:-15282027 | None:intergenic |
| ACTGATCAGTGAAGTTTCTT+GGG | 0.455223 | 4_1:-15282129 | None:intergenic |
| TTCATCATCATGTTTGTTGA+AGG | 0.455442 | 4_1:-15282992 | None:intergenic |
| AATTTCTTACGTCTATTAGC+AGG | 0.457462 | 4_1:-15283091 | None:intergenic |
| TTGGTTTATGGTATAATGAA+TGG | 0.468807 | 4_1:+15285672 | Msa0537270:three_prime_UTR |
| GAGATCCAACGTATCAAAGC+TGG | 0.478771 | 4_1:+15284988 | Msa0537270:CDS |
| TGTTAAGTTACTGTTTAGGA+AGG | 0.483028 | 4_1:-15282050 | None:intergenic |
| GAAGAAAGCTAATGTTCGTC+AGG | 0.494623 | 4_1:+15285294 | Msa0537270:CDS |
| CGAACATTAGCTTTCTTCAC+GGG | 0.494923 | 4_1:-15285289 | None:intergenic |
| AGATAGATATAAACTTCCTA+TGG | 0.499489 | 4_1:-15282089 | None:intergenic |
| GGAACTCTCTGTCTCTTCTC+CGG | 0.501243 | 4_1:-15284054 | None:intergenic |
| CGAAATGAATGTGTGGAAAG+TGG | 0.502844 | 4_1:-15285246 | None:intergenic |
| ATAAATAAAATATCAGCAAA+GGG | 0.507844 | 4_1:+15281931 | None:intergenic |
| TTGTTGCTGGTCCGGTGAAA+AGG | 0.508490 | 4_1:-15282258 | None:intergenic |
| AATAAATAAAATATCAGCAA+AGG | 0.510529 | 4_1:+15281930 | None:intergenic |
| TTAAGTTACTGTTTAGGAAG+GGG | 0.512648 | 4_1:-15282048 | None:intergenic |
| GGTATAATGAATGGTGGGAG+AGG | 0.513224 | 4_1:+15285681 | Msa0537270:three_prime_UTR |
| ACAGCAACAACTCTCTCCTT+CGG | 0.518591 | 4_1:+15282280 | Msa0537270:CDS |
| TGCAATGGACATAACAAAGC+TGG | 0.526911 | 4_1:-15282304 | None:intergenic |
| CCATAAACCAACAACTTGAA+AGG | 0.529902 | 4_1:-15285660 | None:intergenic |
| GTTTATGGTATAATGAATGG+TGG | 0.530292 | 4_1:+15285675 | Msa0537270:three_prime_UTR |
| ATTAAACTTACTTGATGAAG+CGG | 0.531165 | 4_1:-15284089 | None:intergenic |
| ACGAACATTAGCTTTCTTCA+CGG | 0.533864 | 4_1:-15285290 | None:intergenic |
| GTTAAGTTACTGTTTAGGAA+GGG | 0.540423 | 4_1:-15282049 | None:intergenic |
| TTACGTCTATTAGCAGGTGG+AGG | 0.545636 | 4_1:-15283085 | None:intergenic |
| CTGGTCCGGTGAAAAGGAAG+TGG | 0.549720 | 4_1:-15282252 | None:intergenic |
| AGGACGTGCTTATGAAAGAT+GGG | 0.553995 | 4_1:+15285470 | Msa0537270:CDS |
| TTTCATTGTGTAGGATTCAG+AGG | 0.560695 | 4_1:+15285450 | Msa0537270:intron |
| ATGAAGCGGTTGTAGGCAGA+TGG | 0.560728 | 4_1:-15284075 | None:intergenic |
| TTCTTACGTCTATTAGCAGG+TGG | 0.566691 | 4_1:-15283088 | None:intergenic |
| GATTCCCAGCTTTGATACGT+TGG | 0.580008 | 4_1:-15284993 | None:intergenic |
| ACAGTAACTTAACAATCAAG+AGG | 0.585860 | 4_1:+15282059 | Msa0537270:five_prime_UTR |
| AAAGGAAGTGGATGATGAAG+AGG | 0.587043 | 4_1:-15282240 | None:intergenic |
| TATCAGCAAAGGGAGAAAGA+AGG | 0.589220 | 4_1:+15281941 | Msa0537270:five_prime_UTR |
| AGATCCAACGTATCAAAGCT+GGG | 0.600203 | 4_1:+15284989 | Msa0537270:CDS |
| ATCAAGAGGATCAGATCCAT+AGG | 0.607359 | 4_1:+15282073 | Msa0537270:five_prime_UTR |
| GAAATGAATGTGTGGAAAGT+GGG | 0.615090 | 4_1:-15285245 | None:intergenic |
| ATGATGAACACAATGAGAGG+AGG | 0.619560 | 4_1:+15283040 | Msa0537270:CDS |
| CACGCATGTTAACTGAGAGA+AGG | 0.621310 | 4_1:-15282522 | None:intergenic |
| CATGTTAACTGAGAGAAGGT+TGG | 0.622869 | 4_1:-15282518 | None:intergenic |
| TGATGAACACAATGAGAGGA+GGG | 0.625320 | 4_1:+15283041 | Msa0537270:CDS |
| ACATAACAAAGCTGGTCCGA+AGG | 0.642303 | 4_1:-15282296 | None:intergenic |
| GTCTTGAACAAACTTGTGCA+AGG | 0.649953 | 4_1:-15282469 | None:intergenic |
| TTTATGGTATAATGAATGGT+GGG | 0.650395 | 4_1:+15285676 | Msa0537270:three_prime_UTR |
| CAGTGTCACAGAAATTGCAA+TGG | 0.650774 | 4_1:-15282319 | None:intergenic |
| TTTCTGTGACACTGTTCTCG+CGG | 0.670363 | 4_1:+15282328 | Msa0537270:CDS |
| CTGCACTAAAAGCCTCTCTG+TGG | 0.673003 | 4_1:-15285026 | None:intergenic |
| AAGACTGTGACAGTGAGATG+TGG | 0.685505 | 4_1:+15282487 | Msa0537270:CDS |
| TTGATGATGAACACAATGAG+AGG | 0.686722 | 4_1:+15283037 | Msa0537270:CDS |
| TCCTGATATAAGCCACAGAG+AGG | 0.691291 | 4_1:+15285014 | Msa0537270:CDS |
| ATAAGTCCGAAATGAATGTG+TGG | 0.723401 | 4_1:-15285253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAATTTTTAATTTTTAT+TGG | + | chr4_1:15285139-15285158 | Msa0537270:intron | 0.0% |
| !!! | TATAATTTTTAATTTTTATT+GGG | + | chr4_1:15285140-15285159 | Msa0537270:intron | 0.0% |
| !! | ATCTTAACTATTAATTAAAA+GGG | - | chr4_1:15282404-15282423 | None:intergenic | 10.0% |
| !! | AATCTTAACTATTAATTAAA+AGG | - | chr4_1:15282405-15282424 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTGTTTTTCTT+AGG | + | chr4_1:15282438-15282457 | Msa0537270:intron | 10.0% |
| !! | TTCTTTATCAAAAAAAAAAT+TGG | + | chr4_1:15283650-15283669 | Msa0537270:intron | 10.0% |
| !!! | AAATCTATTTAAACTTTTTT+AGG | + | chr4_1:15283763-15283782 | Msa0537270:intron | 10.0% |
| !!! | TCATTATTTTCTTTTTTTTT+TGG | + | chr4_1:15284144-15284163 | Msa0537270:intron | 10.0% |
| !!! | AATTGAAAATAATCTAAAAT+GGG | - | chr4_1:15285109-15285128 | None:intergenic | 10.0% |
| !! | AAATTGAAAATAATCTAAAA+TGG | - | chr4_1:15285110-15285129 | None:intergenic | 10.0% |
| !! | AGAAAAAAAAAGAAAAAAAA+AGG | - | chr4_1:15285362-15285381 | None:intergenic | 10.0% |
| !! | TTGAAGATTTGTAAATTTAA+TGG | + | chr4_1:15282754-15282773 | Msa0537270:intron | 15.0% |
| !!! | TGTAAATTTAATGGATTATT+TGG | + | chr4_1:15282763-15282782 | Msa0537270:intron | 15.0% |
| !! | ATCAATTTATGAAATTATCT+AGG | + | chr4_1:15282801-15282820 | Msa0537270:intron | 15.0% |
| !! | GGTTTAATTAATTATTATTC+AGG | + | chr4_1:15282952-15282971 | Msa0537270:intron | 15.0% |
| !! | TTAATTAATTATTATTCAGG+AGG | + | chr4_1:15282955-15282974 | Msa0537270:intron | 15.0% |
| !! | CTCTAATTTGAAAATAATAT+TGG | - | chr4_1:15283610-15283629 | None:intergenic | 15.0% |
| !!! | TTTTTTGATAAAGAAAATGT+TGG | - | chr4_1:15283645-15283664 | None:intergenic | 15.0% |
| !! | TACTTCAAAATATTTACTAA+AGG | + | chr4_1:15283723-15283742 | Msa0537270:intron | 15.0% |
| !!! | CATTCATTTTAAGTTATTTA+TGG | + | chr4_1:15284114-15284133 | Msa0537270:intron | 15.0% |
| !!! | TTTTTTTACTAAAAATGGTA+TGG | + | chr4_1:15284719-15284738 | Msa0537270:intron | 15.0% |
| !!! | TTTTTTACTAAAAATGGTAT+GGG | + | chr4_1:15284720-15284739 | Msa0537270:intron | 15.0% |
| !!! | TTTTTTTACTAAAAATGGTA+TGG | + | chr4_1:15284719-15284738 | Msa0537270:intron | 15.0% |
| !! | AAGAAAAATAAATTCATAAG+TGG | - | chr4_1:15284842-15284861 | None:intergenic | 15.0% |
| !!! | AATCAAATCATATTTTATCA+AGG | - | chr4_1:15284959-15284978 | None:intergenic | 15.0% |
| !!! | TAAAATATGATTTGATTTTC+AGG | + | chr4_1:15284962-15284981 | Msa0537270:intron | 15.0% |
| !!! | AAAATATGATTTGATTTTCA+GGG | + | chr4_1:15284963-15284982 | Msa0537270:intron | 15.0% |
| !!! | GATTTTTTGATTTGATTGAT+GGG | - | chr4_1:15282159-15282178 | None:intergenic | 20.0% |
| !!! | TGATTTTTTGATTTGATTGA+TGG | - | chr4_1:15282160-15282179 | None:intergenic | 20.0% |
| !! | AAAAATCAAGAATTCAGAAA+AGG | + | chr4_1:15282172-15282191 | Msa0537270:five_prime_UTR | 20.0% |
| !!! | TGTTTTGTATTTTTGTATTC+TGG | + | chr4_1:15282865-15282884 | Msa0537270:intron | 20.0% |
| !!! | ATTTTTGTATTCTGGAAATT+AGG | + | chr4_1:15282873-15282892 | Msa0537270:intron | 20.0% |
| !!! | TTTTGCTTTTCTTCATTAAT+TGG | - | chr4_1:15283390-15283409 | None:intergenic | 20.0% |
| !!! | TTTTCAAATGAGTTTTGATA+GGG | - | chr4_1:15283437-15283456 | None:intergenic | 20.0% |
| !!! | ATTTTCAAATGAGTTTTGAT+AGG | - | chr4_1:15283438-15283457 | None:intergenic | 20.0% |
| !! | AAAGAAAATGTTGGAAATTA+GGG | - | chr4_1:15283636-15283655 | None:intergenic | 20.0% |
| !! | TAAAGAAAATGTTGGAAATT+AGG | - | chr4_1:15283637-15283656 | None:intergenic | 20.0% |
| !! | AGAGAAAAATTATAATGATG+AGG | + | chr4_1:15283903-15283922 | Msa0537270:intron | 20.0% |
| !! | ATACCCTAATATTTAAAGAA+TGG | + | chr4_1:15284313-15284332 | Msa0537270:intron | 20.0% |
| !! | TACCCTAATATTTAAAGAAT+GGG | + | chr4_1:15284314-15284333 | Msa0537270:intron | 20.0% |
| !!! | ATGATAATGATTTCCTTTTT+TGG | - | chr4_1:15284376-15284395 | None:intergenic | 20.0% |
| !! | AAGGAAATCATTATCATAAA+AGG | + | chr4_1:15284379-15284398 | Msa0537270:intron | 20.0% |
| !!! | GATAATTCATTTAACTTTAG+TGG | + | chr4_1:15284879-15284898 | Msa0537270:intron | 20.0% |
| !!! | TGTATTATTTTCTCATTTGT+GGG | + | chr4_1:15285198-15285217 | Msa0537270:intron | 20.0% |
| !!! | TTCTTTTTTTTTCTTCCTTT+TGG | + | chr4_1:15285368-15285387 | Msa0537270:intron | 20.0% |
| ! | GGAGATAAATATGAAAGAAA+AGG | - | chr4_1:15282030-15282049 | None:intergenic | 25.0% |
| ! | TGATTGTTAAGTTACTGTTT+AGG | - | chr4_1:15282057-15282076 | None:intergenic | 25.0% |
| ! | AGATAGATATAAACTTCCTA+TGG | - | chr4_1:15282092-15282111 | None:intergenic | 25.0% |
| !!! | ATATATATATGTAGCTTGCT+TGG | - | chr4_1:15282722-15282741 | None:intergenic | 25.0% |
| !!! | TATACAACTATCTTTTGAGT+TGG | + | chr4_1:15282896-15282915 | Msa0537270:intron | 25.0% |
| !! | TTTGCTGATTATGAGAAATT+TGG | + | chr4_1:15282931-15282950 | Msa0537270:intron | 25.0% |
| ! | ATCATCAAATCATTTGGATT+TGG | - | chr4_1:15283025-15283044 | None:intergenic | 25.0% |
| !! | AACTCAAAAGAAGTGTAAAA+TGG | - | chr4_1:15283349-15283368 | None:intergenic | 25.0% |
| ! | CAAAAAAGAGAAGGAAAAAA+AGG | + | chr4_1:15283405-15283424 | Msa0537270:intron | 25.0% |
| ! | ATTAAACTTACTTGATGAAG+CGG | - | chr4_1:15284092-15284111 | None:intergenic | 25.0% |
| ! | GACCCATTCTTTAAATATTA+GGG | - | chr4_1:15284319-15284338 | None:intergenic | 25.0% |
| ! | TGACCCATTCTTTAAATATT+AGG | - | chr4_1:15284320-15284339 | None:intergenic | 25.0% |
| ! | ACTGGTTAAACATACTAAAA+AGG | - | chr4_1:15284469-15284488 | None:intergenic | 25.0% |
| ! | ACTCTTGATAAATTCCTTAA+GGG | - | chr4_1:15284516-15284535 | None:intergenic | 25.0% |
| ! | TACTCTTGATAAATTCCTTA+AGG | - | chr4_1:15284517-15284536 | None:intergenic | 25.0% |
| !!! | CAACATTTCTTTTTTGACAA+AGG | + | chr4_1:15284537-15284556 | Msa0537270:intron | 25.0% |
| ! | GAACTTCAAAAAATGTTCAA+AGG | - | chr4_1:15284782-15284801 | None:intergenic | 25.0% |
| ! | AGTAAGATTCAGAATTTCAT+TGG | - | chr4_1:15285070-15285089 | None:intergenic | 25.0% |
| !! | AGTACACATTTTTATTGCAT+CGG | + | chr4_1:15285175-15285194 | Msa0537270:intron | 25.0% |
| !! | GTGTATTATTTTCTCATTTG+TGG | + | chr4_1:15285197-15285216 | Msa0537270:intron | 25.0% |
| !! | GTATTATTTTCTCATTTGTG+GGG | + | chr4_1:15285199-15285218 | Msa0537270:intron | 25.0% |
| !!! | TCCATTTATTTTCTTTCAGT+GGG | + | chr4_1:15285222-15285241 | Msa0537270:intron | 25.0% |
| !! | AAAGCATAACTCTTATTTCT+AGG | + | chr4_1:15285407-15285426 | Msa0537270:intron | 25.0% |
| !!! | AAGCATAACTCTTATTTCTA+GGG | + | chr4_1:15285408-15285427 | Msa0537270:intron | 25.0% |
| !! | CTACACAATGAAAGAATTTT+AGG | - | chr4_1:15285443-15285462 | None:intergenic | 25.0% |
| ! | CTAAAATTCTTTCATTGTGT+AGG | + | chr4_1:15285441-15285460 | Msa0537270:intron | 25.0% |
| !!! | ACAAACACACTTTTTTAGTA+GGG | - | chr4_1:15285526-15285545 | None:intergenic | 25.0% |
| !!! | AACAAACACACTTTTTTAGT+AGG | - | chr4_1:15285527-15285546 | None:intergenic | 25.0% |
| !!! | TGTGTTTGTTTTATTGTGTA+GGG | + | chr4_1:15285537-15285556 | Msa0537270:three_prime_UTR | 25.0% |
| !!! | TTTTTATCCTTTCAAGTTGT+TGG | + | chr4_1:15285653-15285672 | Msa0537270:three_prime_UTR | 25.0% |
| ! | TTGGTTTATGGTATAATGAA+TGG | + | chr4_1:15285672-15285691 | Msa0537270:three_prime_UTR | 25.0% |
| ! | TTTATGGTATAATGAATGGT+GGG | + | chr4_1:15285676-15285695 | Msa0537270:three_prime_UTR | 25.0% |
| AAAGAAGGAAAAGACTTTCT+AGG | + | chr4_1:15281956-15281975 | Msa0537270:five_prime_UTR | 30.0% | |
| ! | CGATGCTACTTAAGTATTAA+AGG | - | chr4_1:15281992-15282011 | None:intergenic | 30.0% |
| TTAAGTTACTGTTTAGGAAG+GGG | - | chr4_1:15282051-15282070 | None:intergenic | 30.0% | |
| GTTAAGTTACTGTTTAGGAA+GGG | - | chr4_1:15282052-15282071 | None:intergenic | 30.0% | |
| TGTTAAGTTACTGTTTAGGA+AGG | - | chr4_1:15282053-15282072 | None:intergenic | 30.0% | |
| ACAGTAACTTAACAATCAAG+AGG | + | chr4_1:15282059-15282078 | Msa0537270:five_prime_UTR | 30.0% | |
| ! | GTTTATAAAGAGAAAGTGTG+AGG | - | chr4_1:15282367-15282386 | None:intergenic | 30.0% |
| CAAAAATACAAAACAACCAC+AGG | - | chr4_1:15282860-15282879 | None:intergenic | 30.0% | |
| !!! | ACTATCTTTTGAGTTGGAAT+TGG | + | chr4_1:15282902-15282921 | Msa0537270:intron | 30.0% |
| !!! | TTTTGAGTTGGAATTGGAAA+GGG | + | chr4_1:15282908-15282927 | Msa0537270:intron | 30.0% |
| ! | TTCATCATCATGTTTGTTGA+AGG | - | chr4_1:15282995-15283014 | None:intergenic | 30.0% |
| GTGTTCATCATCAAATCATT+TGG | - | chr4_1:15283031-15283050 | None:intergenic | 30.0% | |
| AATTTCTTACGTCTATTAGC+AGG | - | chr4_1:15283094-15283113 | None:intergenic | 30.0% | |
| GAAGAAAAGCAAAAAAGAGA+AGG | + | chr4_1:15283396-15283415 | Msa0537270:intron | 30.0% | |
| TTTCTTGATGTACTTCAAAG+TGG | + | chr4_1:15283469-15283488 | Msa0537270:intron | 30.0% | |
| AAAAATAGAGCTGAATCCAT+TGG | + | chr4_1:15283866-15283885 | Msa0537270:intron | 30.0% | |
| ACAATTTAATTGTGGAGAAG+TGG | + | chr4_1:15284194-15284213 | Msa0537270:intron | 30.0% | |
| ! | ATATCGCATTTTATATGCAG+GGG | - | chr4_1:15284243-15284262 | None:intergenic | 30.0% |
| ! | GATATCGCATTTTATATGCA+GGG | - | chr4_1:15284244-15284263 | None:intergenic | 30.0% |
| ATTCTGAATCTTACTCTCTT+AGG | + | chr4_1:15285075-15285094 | Msa0537270:intron | 30.0% | |
| !! | GTCCATTTATTTTCTTTCAG+TGG | + | chr4_1:15285221-15285240 | Msa0537270:intron | 30.0% |
| TAAATGTAGATAGCTAGCTA+GGG | - | chr4_1:15285331-15285350 | None:intergenic | 30.0% | |
| ! | TTTTTCACACAAGCAAATGT+AGG | + | chr4_1:15285493-15285512 | Msa0537270:CDS | 30.0% |
| !!! | GTGTGTTTGTTTTATTGTGT+AGG | + | chr4_1:15285536-15285555 | Msa0537270:three_prime_UTR | 30.0% |
| GTTTATGGTATAATGAATGG+TGG | + | chr4_1:15285675-15285694 | Msa0537270:three_prime_UTR | 30.0% | |
| ACTGATCAGTGAAGTTTCTT+GGG | - | chr4_1:15282132-15282151 | None:intergenic | 35.0% | |
| CACATACCATAAGAGTTTGA+GGG | - | chr4_1:15282600-15282619 | None:intergenic | 35.0% | |
| ACACATACCATAAGAGTTTG+AGG | - | chr4_1:15282601-15282620 | None:intergenic | 35.0% | |
| AGTTGTCAGAGTTTGAATCT+CGG | + | chr4_1:15282669-15282688 | Msa0537270:intron | 35.0% | |
| !! | GCTGAAACACTTTTAAGAAG+AGG | - | chr4_1:15282696-15282715 | None:intergenic | 35.0% |
| !! | GTTAATTTTTGTTGTGCCTG+TGG | + | chr4_1:15282841-15282860 | Msa0537270:intron | 35.0% |
| !!! | CTTTTGAGTTGGAATTGGAA+AGG | + | chr4_1:15282907-15282926 | Msa0537270:intron | 35.0% |
| !! | TTGATGATGAACACAATGAG+AGG | + | chr4_1:15283037-15283056 | Msa0537270:CDS | 35.0% |
| ACATGAGAAATGGTGAAGAA+GGG | - | chr4_1:15283218-15283237 | None:intergenic | 35.0% | |
| TACATGAGAAATGGTGAAGA+AGG | - | chr4_1:15283219-15283238 | None:intergenic | 35.0% | |
| ! | TTTTGATGCCATCATGAGAA+AGG | + | chr4_1:15283285-15283304 | Msa0537270:intron | 35.0% |
| ! | TTTTCCTACCTTTCTCATGA+TGG | - | chr4_1:15283296-15283315 | None:intergenic | 35.0% |
| GAAGTGTAAAATGGACAGAA+GGG | - | chr4_1:15283340-15283359 | None:intergenic | 35.0% | |
| ! | AGAAGTGTAAAATGGACAGA+AGG | - | chr4_1:15283341-15283360 | None:intergenic | 35.0% |
| !! | CAAATGAGTTTTGATAGGGA+TGG | - | chr4_1:15283433-15283452 | None:intergenic | 35.0% |
| !! | TCATTTTTCAGCCCTAGATT+TGG | - | chr4_1:15283688-15283707 | None:intergenic | 35.0% |
| !! | TGGATTCAGCTCTATTTTTC+CGG | - | chr4_1:15283865-15283884 | None:intergenic | 35.0% |
| ! | GAAAGAAGAGAGTTCTGATT+AGG | + | chr4_1:15283967-15283986 | Msa0537270:intron | 35.0% |
| GAGCTCACACAATTTAATTG+TGG | + | chr4_1:15284186-15284205 | Msa0537270:intron | 35.0% | |
| ! | GGATATCGCATTTTATATGC+AGG | - | chr4_1:15284245-15284264 | None:intergenic | 35.0% |
| CTGGTTAAGCATACCAAAAA+AGG | + | chr4_1:15284360-15284379 | Msa0537270:intron | 35.0% | |
| GCCCACTGAAAGAAAATAAA+TGG | - | chr4_1:15285226-15285245 | None:intergenic | 35.0% | |
| GAAATGAATGTGTGGAAAGT+GGG | - | chr4_1:15285248-15285267 | None:intergenic | 35.0% | |
| CACTTTCCACACATTCATTT+CGG | + | chr4_1:15285247-15285266 | Msa0537270:CDS | 35.0% | |
| ATAAGTCCGAAATGAATGTG+TGG | - | chr4_1:15285256-15285275 | None:intergenic | 35.0% | |
| !! | ACGAACATTAGCTTTCTTCA+CGG | - | chr4_1:15285293-15285312 | None:intergenic | 35.0% |
| GTAAATGTAGATAGCTAGCT+AGG | - | chr4_1:15285332-15285351 | None:intergenic | 35.0% | |
| TCATTTAATGTGCTGCCAAA+AGG | - | chr4_1:15285386-15285405 | None:intergenic | 35.0% | |
| TTTCATTGTGTAGGATTCAG+AGG | + | chr4_1:15285450-15285469 | Msa0537270:intron | 35.0% | |
| CCATAAACCAACAACTTGAA+AGG | - | chr4_1:15285663-15285682 | None:intergenic | 35.0% | |
| !! | CCTTTCAAGTTGTTGGTTTA+TGG | + | chr4_1:15285660-15285679 | Msa0537270:three_prime_UTR | 35.0% |
| TATCAGCAAAGGGAGAAAGA+AGG | + | chr4_1:15281941-15281960 | Msa0537270:five_prime_UTR | 40.0% | |
| ATCAAGAGGATCAGATCCAT+AGG | + | chr4_1:15282073-15282092 | Msa0537270:five_prime_UTR | 40.0% | |
| GACTGATCAGTGAAGTTTCT+TGG | - | chr4_1:15282133-15282152 | None:intergenic | 40.0% | |
| AAAGGAAGTGGATGATGAAG+AGG | - | chr4_1:15282243-15282262 | None:intergenic | 40.0% | |
| ! | ATCATCCACTTCCTTTTCAC+CGG | + | chr4_1:15282247-15282266 | Msa0537270:CDS | 40.0% |
| TGCAATGGACATAACAAAGC+TGG | - | chr4_1:15282307-15282326 | None:intergenic | 40.0% | |
| CAGTGTCACAGAAATTGCAA+TGG | - | chr4_1:15282322-15282341 | None:intergenic | 40.0% | |
| GTCTTGAACAAACTTGTGCA+AGG | - | chr4_1:15282472-15282491 | None:intergenic | 40.0% | |
| CATGTTAACTGAGAGAAGGT+TGG | - | chr4_1:15282521-15282540 | None:intergenic | 40.0% | |
| ! | TGTCCAAGGTGAAGTTGATT+TGG | - | chr4_1:15282565-15282584 | None:intergenic | 40.0% |
| CTTCAACCCTCAAACTCTTA+TGG | + | chr4_1:15282591-15282610 | Msa0537270:intron | 40.0% | |
| ATGATGAACACAATGAGAGG+AGG | + | chr4_1:15283040-15283059 | Msa0537270:CDS | 40.0% | |
| TGATGAACACAATGAGAGGA+GGG | + | chr4_1:15283041-15283060 | Msa0537270:CDS | 40.0% | |
| TATTAGCAGGTGGAGGTTTA+GGG | - | chr4_1:15283081-15283100 | None:intergenic | 40.0% | |
| TTCTTACGTCTATTAGCAGG+TGG | - | chr4_1:15283091-15283110 | None:intergenic | 40.0% | |
| GGCATAGCATACATGAGAAA+TGG | - | chr4_1:15283228-15283247 | None:intergenic | 40.0% | |
| AAAATGGACAGAAGGGTTTC+AGG | - | chr4_1:15283333-15283352 | None:intergenic | 40.0% | |
| AGAAGCCGTATACCAAATCT+AGG | + | chr4_1:15283673-15283692 | Msa0537270:intron | 40.0% | |
| GAAGCCGTATACCAAATCTA+GGG | + | chr4_1:15283674-15283693 | Msa0537270:intron | 40.0% | |
| ! | TCAGCCCTAGATTTGGTATA+CGG | - | chr4_1:15283681-15283700 | None:intergenic | 40.0% |
| TCACTCAATGTTTGCATGCA+AGG | - | chr4_1:15283827-15283846 | None:intergenic | 40.0% | |
| !! | ATTCAGCTCTATTTTTCCGG+GGG | - | chr4_1:15283862-15283881 | None:intergenic | 40.0% |
| !! | GATTCAGCTCTATTTTTCCG+GGG | - | chr4_1:15283863-15283882 | None:intergenic | 40.0% |
| !! | GGATTCAGCTCTATTTTTCC+GGG | - | chr4_1:15283864-15283883 | None:intergenic | 40.0% |
| CTCTAACAATCACTCTCCAA+TGG | - | chr4_1:15283885-15283904 | None:intergenic | 40.0% | |
| TTACTTGATGAAGCGGTTGT+AGG | - | chr4_1:15284085-15284104 | None:intergenic | 40.0% | |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | + | chr4_1:15284160-15284179 | Msa0537270:intron | 40.0% |
| AAAGAATGGGTCATGCTAAC+CGG | + | chr4_1:15284327-15284346 | Msa0537270:intron | 40.0% | |
| AGATCCAACGTATCAAAGCT+GGG | + | chr4_1:15284989-15285008 | Msa0537270:CDS | 40.0% | |
| CGAAATGAATGTGTGGAAAG+TGG | - | chr4_1:15285249-15285268 | None:intergenic | 40.0% | |
| !! | CGAACATTAGCTTTCTTCAC+GGG | - | chr4_1:15285292-15285311 | None:intergenic | 40.0% |
| GAAGAAAGCTAATGTTCGTC+AGG | + | chr4_1:15285294-15285313 | Msa0537270:CDS | 40.0% | |
| AGGACGTGCTTATGAAAGAT+GGG | + | chr4_1:15285470-15285489 | Msa0537270:CDS | 40.0% | |
| ! | AGAGTTGTTGCTGTTGTTGC+TGG | - | chr4_1:15282274-15282293 | None:intergenic | 45.0% |
| ACAGCAACAACTCTCTCCTT+CGG | + | chr4_1:15282280-15282299 | Msa0537270:CDS | 45.0% | |
| ACATAACAAAGCTGGTCCGA+AGG | - | chr4_1:15282299-15282318 | None:intergenic | 45.0% | |
| TTTCTGTGACACTGTTCTCG+CGG | + | chr4_1:15282328-15282347 | Msa0537270:CDS | 45.0% | |
| AAGACTGTGACAGTGAGATG+TGG | + | chr4_1:15282487-15282506 | Msa0537270:CDS | 45.0% | |
| CACGCATGTTAACTGAGAGA+AGG | - | chr4_1:15282525-15282544 | None:intergenic | 45.0% | |
| !! | GAAGTTGATTTGGAGCAGGA+AGG | - | chr4_1:15282555-15282574 | None:intergenic | 45.0% |
| !! | AGGTGAAGTTGATTTGGAGC+AGG | - | chr4_1:15282559-15282578 | None:intergenic | 45.0% |
| GCTCCAAATCAACTTCACCT+TGG | + | chr4_1:15282559-15282578 | Msa0537270:intron | 45.0% | |
| GGTTGAAGTAAGTGTGTCCA+AGG | - | chr4_1:15282579-15282598 | None:intergenic | 45.0% | |
| CTATTAGCAGGTGGAGGTTT+AGG | - | chr4_1:15283082-15283101 | None:intergenic | 45.0% | |
| TTACGTCTATTAGCAGGTGG+AGG | - | chr4_1:15283088-15283107 | None:intergenic | 45.0% | |
| GATGCCATCATGAGAAAGGT+AGG | + | chr4_1:15283289-15283308 | Msa0537270:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr4_1:15284266-15284285 | None:intergenic | 45.0% |
| TACCAACTGAGCTAAGCTCA+CGG | + | chr4_1:15284266-15284285 | Msa0537270:intron | 45.0% | |
| AGTATGTTTAACCAGTGCCC+CGG | + | chr4_1:15284473-15284492 | Msa0537270:intron | 45.0% | |
| TCCTTAAGGGAAATGCTAGC+CGG | - | chr4_1:15284503-15284522 | None:intergenic | 45.0% | |
| GAGATCCAACGTATCAAAGC+TGG | + | chr4_1:15284988-15285007 | Msa0537270:CDS | 45.0% | |
| ! | GATTCCCAGCTTTGATACGT+TGG | - | chr4_1:15284996-15285015 | None:intergenic | 45.0% |
| TCCTGATATAAGCCACAGAG+AGG | + | chr4_1:15285014-15285033 | Msa0537270:CDS | 45.0% | |
| !! | TTCTTCACGGGTTGATGATC+AGG | - | chr4_1:15285280-15285299 | None:intergenic | 45.0% |
| GAGGACGTGCTTATGAAAGA+TGG | + | chr4_1:15285469-15285488 | Msa0537270:CDS | 45.0% | |
| ! | GGTATAATGAATGGTGGGAG+AGG | + | chr4_1:15285681-15285700 | Msa0537270:three_prime_UTR | 45.0% |
| !! | AAATTAAAATTAAAAACATA+TGG | - | chr4_1:15283249-15283268 | None:intergenic | 5.0% |
| !!! | AGTATTTTTTTTAATTAATT+TGG | - | chr4_1:15283582-15283601 | None:intergenic | 5.0% |
| !!! | ATAAACATTTTTTATTTTTA+TGG | + | chr4_1:15284578-15284597 | Msa0537270:intron | 5.0% |
| !!! | ATTTATTTTTTTACTAAAAA+TGG | + | chr4_1:15284714-15284733 | Msa0537270:intron | 5.0% |
| !!! | TATTTTTTTTTTACTAAAAA+TGG | + | chr4_1:15284747-15284766 | Msa0537270:intron | 5.0% |
| !!! | TAAACATTTTTTTTTTATTA+CGG | + | chr4_1:15284814-15284833 | Msa0537270:intron | 5.0% |
| TTGTTGCTGGTCCGGTGAAA+AGG | - | chr4_1:15282261-15282280 | None:intergenic | 50.0% | |
| ! | TGTTGCTGTTGTTGCTGGTC+CGG | - | chr4_1:15282269-15282288 | None:intergenic | 50.0% |
| GTGAGACAGAATTCTTCCCC+CGG | + | chr4_1:15283843-15283862 | Msa0537270:intron | 50.0% | |
| CATTGCTCAGGCAAACAGAC+AGG | - | chr4_1:15284011-15284030 | None:intergenic | 50.0% | |
| CAAACACACGGACATTGCTC+AGG | - | chr4_1:15284023-15284042 | None:intergenic | 50.0% | |
| GAGCTGGACAAGCAAACACA+CGG | - | chr4_1:15284035-15284054 | None:intergenic | 50.0% | |
| TGTGTTTGCTTGTCCAGCTC+CGG | + | chr4_1:15284035-15284054 | Msa0537270:intron | 50.0% | |
| GGAACTCTCTGTCTCTTCTC+CGG | - | chr4_1:15284057-15284076 | None:intergenic | 50.0% | |
| ATGAAGCGGTTGTAGGCAGA+TGG | - | chr4_1:15284078-15284097 | None:intergenic | 50.0% | |
| ! | TTGTGTGAGCTCTAGCCACT+AGG | - | chr4_1:15284178-15284197 | None:intergenic | 50.0% |
| ! | TTGTGGAGAAGTGGAGTGTC+CGG | + | chr4_1:15284203-15284222 | Msa0537270:intron | 50.0% |
| ! | CATTTTATATGCAGGGGCCG+GGG | - | chr4_1:15284237-15284256 | None:intergenic | 50.0% |
| ! | GCATTTTATATGCAGGGGCC+GGG | - | chr4_1:15284238-15284257 | None:intergenic | 50.0% |
| ! | CGCATTTTATATGCAGGGGC+CGG | - | chr4_1:15284239-15284258 | None:intergenic | 50.0% |
| GTGAGCTTAGCTCAGTTGGT+AGG | - | chr4_1:15284267-15284286 | None:intergenic | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | + | chr4_1:15284267-15284286 | Msa0537270:intron | 50.0% | |
| GTATGTTTAACCAGTGCCCC+GGG | + | chr4_1:15284474-15284493 | Msa0537270:intron | 50.0% | |
| TATGTTTAACCAGTGCCCCG+GGG | + | chr4_1:15284475-15284494 | Msa0537270:intron | 50.0% | |
| ACCGGCTAGCATTTCCCTTA+AGG | + | chr4_1:15284499-15284518 | Msa0537270:intron | 50.0% | |
| GCCTCTCTGTGGCTTATATC+AGG | - | chr4_1:15285018-15285037 | None:intergenic | 50.0% | |
| CTGCACTAAAAGCCTCTCTG+TGG | - | chr4_1:15285029-15285048 | None:intergenic | 50.0% | |
| CTGGTCCGGTGAAAAGGAAG+TGG | - | chr4_1:15282255-15282274 | None:intergenic | 55.0% | |
| ! | TGTGGAGAAGTGGAGTGTCC+GGG | + | chr4_1:15284204-15284223 | Msa0537270:intron | 55.0% |
| CCAACTGAGCTAAGCTCACG+GGG | + | chr4_1:15284268-15284287 | Msa0537270:intron | 55.0% | |
| GGGTCATGCTAACCGGTGTT+CGG | + | chr4_1:15284334-15284353 | Msa0537270:intron | 55.0% | |
| GGTCATGCTAACCGGTGTTC+GGG | + | chr4_1:15284335-15284354 | Msa0537270:intron | 55.0% | |
| CTTAACCAGTGCCCGAACAC+CGG | - | chr4_1:15284349-15284368 | None:intergenic | 55.0% | |
| CTCTGTCTCTTCTCCGGAGC+TGG | - | chr4_1:15284051-15284070 | None:intergenic | 60.0% | |
| ! | GTGGAGAAGTGGAGTGTCCG+GGG | + | chr4_1:15284205-15284224 | Msa0537270:intron | 60.0% |
| CCCCGTGAGCTTAGCTCAGT+TGG | - | chr4_1:15284271-15284290 | None:intergenic | 60.0% | |
| CTGAGCTAAGCTCACGGGGA+TGG | + | chr4_1:15284272-15284291 | Msa0537270:intron | 60.0% | |
| AGTGTCCGGGGTTCGAACCC+CGG | + | chr4_1:15284217-15284236 | Msa0537270:intron | 65.0% | |
| GCTAACCGGTGTTCGGGCAC+TGG | + | chr4_1:15284341-15284360 | Msa0537270:intron | 65.0% | |
| AAATGCTAGCCGGTGCCCCG+GGG | - | chr4_1:15284493-15284512 | None:intergenic | 65.0% | |
| GAAATGCTAGCCGGTGCCCC+GGG | - | chr4_1:15284494-15284513 | None:intergenic | 65.0% | |
| GGAAATGCTAGCCGGTGCCC+CGG | - | chr4_1:15284495-15284514 | None:intergenic | 65.0% | |
| TAACCAGTGCCCCGGGGCAC+CGG | + | chr4_1:15284481-15284500 | Msa0537270:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | - | chr4_1:15284225-15284244 | None:intergenic | 75.0% | |
| ! | TAGCCGGTGCCCCGGGGCAC+TGG | - | chr4_1:15284487-15284506 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 15281937 | 15285713 | 15281937 | ID=Msa0537270;Name=Msa0537270 |
| chr4_1 | mRNA | 15281937 | 15285713 | 15281937 | ID=Msa0537270-mRNA-1;Parent=Msa0537270;Name=Msa0537270-mRNA-1;_AED=0.17;_eAED=0.17;_QI=299|0.83|0.85|1|0.83|0.85|7|182|194 |
| chr4_1 | exon | 15281937 | 15282349 | 15281937 | ID=Msa0537270-mRNA-1:exon:4733;Parent=Msa0537270-mRNA-1 |
| chr4_1 | exon | 15282460 | 15282531 | 15282460 | ID=Msa0537270-mRNA-1:exon:4734;Parent=Msa0537270-mRNA-1 |
| chr4_1 | exon | 15282974 | 15283103 | 15282974 | ID=Msa0537270-mRNA-1:exon:4735;Parent=Msa0537270-mRNA-1 |
| chr4_1 | exon | 15284052 | 15284100 | 15284052 | ID=Msa0537270-mRNA-1:exon:4736;Parent=Msa0537270-mRNA-1 |
| chr4_1 | exon | 15284984 | 15285059 | 15284984 | ID=Msa0537270-mRNA-1:exon:4737;Parent=Msa0537270-mRNA-1 |
| chr4_1 | exon | 15285241 | 15285315 | 15285241 | ID=Msa0537270-mRNA-1:exon:4738;Parent=Msa0537270-mRNA-1 |
| chr4_1 | exon | 15285463 | 15285713 | 15285463 | ID=Msa0537270-mRNA-1:exon:4739;Parent=Msa0537270-mRNA-1 |
| chr4_1 | five_prime_UTR | 15281937 | 15282235 | 15281937 | ID=Msa0537270-mRNA-1:five_prime_utr;Parent=Msa0537270-mRNA-1 |
| chr4_1 | CDS | 15282236 | 15282349 | 15282236 | ID=Msa0537270-mRNA-1:cds;Parent=Msa0537270-mRNA-1 |
| chr4_1 | CDS | 15282460 | 15282531 | 15282460 | ID=Msa0537270-mRNA-1:cds;Parent=Msa0537270-mRNA-1 |
| chr4_1 | CDS | 15282974 | 15283103 | 15282974 | ID=Msa0537270-mRNA-1:cds;Parent=Msa0537270-mRNA-1 |
| chr4_1 | CDS | 15284052 | 15284100 | 15284052 | ID=Msa0537270-mRNA-1:cds;Parent=Msa0537270-mRNA-1 |
| chr4_1 | CDS | 15284984 | 15285059 | 15284984 | ID=Msa0537270-mRNA-1:cds;Parent=Msa0537270-mRNA-1 |
| chr4_1 | CDS | 15285241 | 15285315 | 15285241 | ID=Msa0537270-mRNA-1:cds;Parent=Msa0537270-mRNA-1 |
| chr4_1 | CDS | 15285463 | 15285531 | 15285463 | ID=Msa0537270-mRNA-1:cds;Parent=Msa0537270-mRNA-1 |
| chr4_1 | three_prime_UTR | 15285532 | 15285713 | 15285532 | ID=Msa0537270-mRNA-1:three_prime_utr;Parent=Msa0537270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
