Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257840 | KAG5097594.1 | 68.058 | 551 | 86 | 6 | 34 | 557 | 27 | 514 | 0.0 | 752 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257840 | sp|P49045|VPE_SOYBN | 75.482 | 363 | 62 | 2 | 222 | 557 | 133 | 495 | 0.0 | 582 |
| Msa1257840 | sp|P49045|VPE_SOYBN | 85.638 | 188 | 26 | 1 | 34 | 221 | 27 | 213 | 8.74e-111 | 342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005910 | Msa1257840 | 0.800854 | 1.185498e-48 | -8.615850e-47 |
| Msa0095920 | Msa1257840 | 0.836526 | 8.885768e-57 | -8.615850e-47 |
| Msa0099160 | Msa1257840 | 0.807971 | 3.895376e-50 | -8.615850e-47 |
| Msa1257840 | Msa1329130 | 0.912503 | 1.807882e-83 | -8.615850e-47 |
| Msa1257840 | Msa1329210 | 0.916270 | 2.179441e-85 | -8.615850e-47 |
| Msa1257840 | Msa1412370 | 0.836038 | 1.182844e-56 | -8.615850e-47 |
| Msa1257840 | Msa1461690 | 0.821111 | 4.802690e-53 | -8.615850e-47 |
| Msa1066760 | Msa1257840 | 0.812128 | 4.954169e-51 | -8.615850e-47 |
| Msa1207790 | Msa1257840 | 0.933469 | 1.789455e-95 | -8.615850e-47 |
| Msa1207800 | Msa1257840 | 0.921590 | 2.943056e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257840 | MtrunA17_Chr4g0056561 | 89.532 | 363 | 11 | 2 | 222 | 557 | 132 | 494 | 0.0 | 659 |
| Msa1257840 | MtrunA17_Chr4g0056561 | 95.755 | 212 | 9 | 0 | 10 | 221 | 1 | 212 | 4.59e-142 | 419 |
| Msa1257840 | MtrunA17_Chr3g0135491 | 48.760 | 363 | 155 | 5 | 208 | 540 | 106 | 467 | 4.83e-118 | 357 |
| Msa1257840 | MtrunA17_Chr3g0135491 | 55.140 | 214 | 93 | 1 | 28 | 238 | 6 | 219 | 9.14e-76 | 248 |
| Msa1257840 | MtrunA17_Chr1g0151801 | 50.000 | 366 | 150 | 5 | 222 | 557 | 131 | 493 | 8.37e-112 | 342 |
| Msa1257840 | MtrunA17_Chr1g0151801 | 59.624 | 213 | 74 | 3 | 16 | 221 | 4 | 211 | 9.19e-75 | 246 |
| Msa1257840 | MtrunA17_Chr7g0248651 | 37.815 | 357 | 177 | 5 | 222 | 540 | 120 | 469 | 8.38e-71 | 234 |
| Msa1257840 | MtrunA17_Chr7g0248651 | 54.455 | 202 | 82 | 1 | 20 | 221 | 9 | 200 | 3.81e-68 | 228 |
| Msa1257840 | MtrunA17_Chr7g0246051 | 52.736 | 201 | 90 | 1 | 21 | 221 | 4 | 199 | 7.80e-65 | 213 |
| Msa1257840 | MtrunA17_Chr7g0246051 | 57.377 | 122 | 52 | 0 | 222 | 343 | 119 | 240 | 2.02e-43 | 155 |
| Msa1257840 | MtrunA17_Chr7g0226421 | 65.891 | 129 | 44 | 0 | 65 | 193 | 31 | 159 | 2.04e-54 | 181 |
| Msa1257840 | MtrunA17_Chr7g0226421 | 54.717 | 53 | 24 | 0 | 222 | 274 | 107 | 159 | 1.32e-11 | 63.2 |
| Msa1257840 | MtrunA17_Chr7g0226441 | 34.615 | 208 | 102 | 4 | 357 | 540 | 1 | 198 | 2.29e-32 | 123 |
| Msa1257840 | MtrunA17_Chr7g0246061 | 31.579 | 190 | 105 | 5 | 369 | 542 | 8 | 188 | 3.85e-20 | 88.6 |
| Msa1257840 | MtrunA17_Chr7g0226431 | 61.702 | 47 | 18 | 0 | 306 | 352 | 1 | 47 | 8.46e-16 | 72.8 |
| Msa1257840 | MtrunA17_Chr2g0307771 | 28.641 | 206 | 135 | 4 | 69 | 272 | 44 | 239 | 1.66e-15 | 78.6 |
| Msa1257840 | MtrunA17_Chr1g0193781 | 26.108 | 203 | 142 | 4 | 54 | 249 | 19 | 220 | 2.40e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257840 | AT1G62710.1 | 62.740 | 365 | 105 | 4 | 222 | 557 | 124 | 486 | 1.12e-161 | 469 |
| Msa1257840 | AT1G62710.1 | 71.429 | 182 | 50 | 1 | 42 | 221 | 23 | 204 | 3.51e-86 | 276 |
| Msa1257840 | AT4G32940.1 | 51.648 | 364 | 147 | 4 | 222 | 557 | 132 | 494 | 1.19e-114 | 349 |
| Msa1257840 | AT4G32940.1 | 70.811 | 185 | 48 | 2 | 43 | 221 | 28 | 212 | 1.72e-80 | 261 |
| Msa1257840 | AT2G25940.1 | 48.901 | 364 | 156 | 5 | 222 | 557 | 117 | 478 | 6.08e-107 | 329 |
| Msa1257840 | AT2G25940.1 | 71.591 | 176 | 47 | 1 | 49 | 221 | 22 | 197 | 2.35e-77 | 252 |
| Msa1257840 | AT3G20210.1 | 36.390 | 349 | 185 | 7 | 222 | 536 | 119 | 464 | 4.53e-61 | 209 |
| Msa1257840 | AT3G20210.1 | 60.000 | 165 | 66 | 0 | 57 | 221 | 35 | 199 | 6.25e-61 | 209 |
| Msa1257840 | AT1G08750.3 | 28.947 | 190 | 132 | 3 | 69 | 256 | 28 | 216 | 3.33e-15 | 78.2 |
| Msa1257840 | AT1G08750.2 | 28.947 | 190 | 132 | 3 | 69 | 256 | 28 | 216 | 3.33e-15 | 78.2 |
| Msa1257840 | AT1G08750.1 | 28.947 | 190 | 132 | 3 | 69 | 256 | 28 | 216 | 3.33e-15 | 78.2 |
Find 165 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATATACATATGGCATATT+TGG | 0.193751 | 8_2:+58824493 | None:intergenic |
| GCATATACATACGGCATATT+TGG | 0.217041 | 8_2:+58822914 | None:intergenic |
| AAGACAAATTAAATTAAATT+AGG | 0.218095 | 8_2:-58820834 | Msa1257840:three_prime_UTR |
| GCGAGTCGCACAATCTAAAA+AGG | 0.250061 | 8_2:-58822265 | Msa1257840:CDS |
| AACCTATACGCTGTCATTCT+TGG | 0.266606 | 8_2:-58823319 | Msa1257840:CDS |
| AACCTATACGCTGTCATTCT+TGG | 0.266606 | 8_2:-58824908 | Msa1257840:CDS |
| TGACAAACTAGGATCTAAAA+TGG | 0.296605 | 8_2:-58821969 | Msa1257840:CDS |
| CGGTGTTTCTGAGGATTCTA+TGG | 0.301877 | 8_2:-58821284 | Msa1257840:CDS |
| AACAGTTTCTACTTTATCTT+AGG | 0.305913 | 8_2:+58821001 | None:intergenic |
| AATTACAACAACTATGCATT+AGG | 0.321118 | 8_2:-58822091 | Msa1257840:CDS |
| GCACTATAACCTCTGTTTGA+TGG | 0.321858 | 8_2:+58821211 | None:intergenic |
| GCATACCAGTTGTTGATAAA+AGG | 0.328829 | 8_2:-58828295 | Msa1257840:CDS |
| TGTGGGTCACTGACACAGTA+TGG | 0.329644 | 8_2:-58821346 | Msa1257840:CDS |
| ATAAAATCTCTGCATCTCTT+TGG | 0.334302 | 8_2:+58821936 | None:intergenic |
| CTCGTCAATTGTGAAATTGC+TGG | 0.336695 | 8_2:-58821129 | Msa1257840:three_prime_UTR |
| CATGGAGGCCCCGGAGTTCT+TGG | 0.345994 | 8_2:-58823214 | Msa1257840:intron |
| CATGGAGGCCCTGGAGTTCT+TGG | 0.351278 | 8_2:-58824803 | Msa1257840:intron |
| GATGGTAGCGTGGAATTGAT+TGG | 0.366010 | 8_2:-58821722 | Msa1257840:CDS |
| GGAGGAAGGTTCACCGTTGC+AGG | 0.366394 | 8_2:+58821998 | None:intergenic |
| ACATTATGTTGAACATATAT+TGG | 0.373351 | 8_2:+58821063 | None:intergenic |
| CTGGTGAAACAAATATTAAT+AGG | 0.403635 | 8_2:+58820804 | None:intergenic |
| CCAATGCACAAGAGAGTAGT+TGG | 0.407355 | 8_2:-58822660 | Msa1257840:CDS |
| ACATAAACATTAAGATCCTT+TGG | 0.408253 | 8_2:+58822694 | None:intergenic |
| TTTATATATTACTCCGATCA+TGG | 0.414926 | 8_2:-58823232 | Msa1257840:CDS |
| TTTATATATTACTCCGATCA+TGG | 0.414926 | 8_2:-58824821 | Msa1257840:CDS |
| TTTCCGGTGTTCTATCTTTG+TGG | 0.419086 | 8_2:-58828681 | Msa1257840:CDS |
| CGATGGGCTGTTCTTGTGGC+TGG | 0.421624 | 8_2:-58828532 | Msa1257840:CDS |
| GGTTCTCATGTGATGCAATA+TGG | 0.435826 | 8_2:-58822070 | Msa1257840:CDS |
| AAAAGGTTCTTCAGTTCTAC+AGG | 0.438706 | 8_2:-58821678 | Msa1257840:CDS |
| TACTCCGATCATGGAGGCCC+TGG | 0.442503 | 8_2:-58824812 | Msa1257840:CDS |
| CCAACTACTCTCTTGTGCAT+TGG | 0.445049 | 8_2:+58822660 | None:intergenic |
| GTAATTTGCAATTGAGAGAA+TGG | 0.447007 | 8_2:-58820930 | Msa1257840:three_prime_UTR |
| GTGTTCTATCTTTGTGGCCA+TGG | 0.447530 | 8_2:-58828675 | Msa1257840:CDS |
| TCAACAGCAAATCCGAAGAT+AGG | 0.454259 | 8_2:-58823258 | Msa1257840:CDS |
| TCAACAGCAAATCCGAAGAT+AGG | 0.454259 | 8_2:-58824847 | Msa1257840:CDS |
| CCTAGGATTCAACTCGTTGT+TGG | 0.455278 | 8_2:+58828225 | None:intergenic |
| TTGAAGAAGAAACATGCATC+TGG | 0.455830 | 8_2:-58822872 | Msa1257840:CDS |
| GTGGCTGGTTCAAGTGGTTA+CGG | 0.456132 | 8_2:-58828517 | Msa1257840:CDS |
| ATATATAAATATCCTATCTT+CGG | 0.458355 | 8_2:+58823246 | None:intergenic |
| ATATATAAATATCCTATCTT+CGG | 0.458355 | 8_2:+58824835 | None:intergenic |
| AAGATAAAGTAGAAACTGTT+GGG | 0.472867 | 8_2:-58820998 | Msa1257840:three_prime_UTR |
| TTGAAGAAGAAACATGCATC+TGG | 0.473224 | 8_2:-58824451 | Msa1257840:CDS |
| ATGTACTCTGGAGGTGGAGC+AGG | 0.473851 | 8_2:+58822613 | None:intergenic |
| TTACTGTTTGGTCCAACAAA+AGG | 0.476498 | 8_2:-58821695 | Msa1257840:CDS |
| AAACATAGGAATCATTTAGA+TGG | 0.482034 | 8_2:-58821740 | Msa1257840:CDS |
| TACTCCGATCATGGAGGCCC+CGG | 0.482412 | 8_2:-58823223 | Msa1257840:CDS |
| GGTGAAACAACAATACAAAT+CGG | 0.482608 | 8_2:-58822237 | Msa1257840:intron |
| CCTTGAGAAGATTGCGGAGA+CGG | 0.485427 | 8_2:-58821765 | Msa1257840:CDS |
| ACTTTGTGTGGTACACTACA+TGG | 0.485469 | 8_2:-58821185 | Msa1257840:three_prime_UTR |
| CAATGCACAAGAGAGTAGTT+GGG | 0.486134 | 8_2:-58822659 | Msa1257840:CDS |
| AAATCCATAGCATATACATA+TGG | 0.486339 | 8_2:+58824484 | None:intergenic |
| CTACAGGCTCTTAGAGAACC+TGG | 0.489099 | 8_2:-58821662 | Msa1257840:CDS |
| ACATATATTGGAGGCGCATA+GGG | 0.489470 | 8_2:+58821075 | None:intergenic |
| AACTCCAGGGCCTCCATGAT+CGG | 0.493596 | 8_2:+58824808 | None:intergenic |
| GGTGGAGCAGGTTCCACTCC+AGG | 0.496020 | 8_2:+58822625 | None:intergenic |
| AACATATATTGGAGGCGCAT+AGG | 0.498831 | 8_2:+58821074 | None:intergenic |
| CCTCCTCACAATGACAAACT+AGG | 0.499499 | 8_2:-58821980 | Msa1257840:CDS |
| CTCCAAGAATGACAGCGTAT+AGG | 0.502835 | 8_2:+58823317 | None:intergenic |
| CTCCAAGAATGACAGCGTAT+AGG | 0.502835 | 8_2:+58824906 | None:intergenic |
| TGTTTATGTCGGCGTTCCTA+AGG | 0.503472 | 8_2:-58828167 | Msa1257840:intron |
| AGTTGGGGAACTTACTGTCC+TGG | 0.508806 | 8_2:-58822643 | Msa1257840:CDS |
| AACTCCGGGGCCTCCATGAT+CGG | 0.509290 | 8_2:+58823219 | None:intergenic |
| TGGAGACAAGAGTAAAGTAA+AGG | 0.513486 | 8_2:-58823299 | Msa1257840:CDS |
| TGGAGACAAGAGTAAAGTAA+AGG | 0.513486 | 8_2:-58824888 | Msa1257840:CDS |
| AACGAGTTGAATCCTAGGCC+TGG | 0.520309 | 8_2:-58828220 | Msa1257840:CDS |
| TGAAAGTGGTAGCATGTTTG+AGG | 0.520691 | 8_2:-58822725 | Msa1257840:CDS |
| TTTAACTGACCAAGAACTCC+AGG | 0.522124 | 8_2:+58824794 | None:intergenic |
| GATGCTGAGGTGGATGAAGT+TGG | 0.522444 | 8_2:-58828559 | Msa1257840:CDS |
| CCAACAACGAGTTGAATCCT+AGG | 0.523708 | 8_2:-58828225 | Msa1257840:CDS |
| GGGTGACACGTTATATATGT+TGG | 0.524377 | 8_2:+58828833 | None:intergenic |
| ATCATATACAAAAGATTACT+AGG | 0.525515 | 8_2:-58828938 | None:intergenic |
| AGTAAAGTAAAGGGTGGAAG+TGG | 0.525742 | 8_2:-58823289 | Msa1257840:CDS |
| AGTAAAGTAAAGGGTGGAAG+TGG | 0.525742 | 8_2:-58824878 | Msa1257840:CDS |
| GACACGATGGGCTGTTCTTG+TGG | 0.525935 | 8_2:-58828536 | Msa1257840:CDS |
| TTCTGAGGATTCTATGGAGA+AGG | 0.527244 | 8_2:-58821278 | Msa1257840:CDS |
| TTTAGTTGTGAAGAGTAAGC+AGG | 0.528396 | 8_2:-58821028 | Msa1257840:three_prime_UTR |
| GGAGACAAGAGTAAAGTAAA+GGG | 0.531219 | 8_2:-58823298 | Msa1257840:CDS |
| GGAGACAAGAGTAAAGTAAA+GGG | 0.531219 | 8_2:-58824887 | Msa1257840:CDS |
| TATGCCATATGTATATGCTA+TGG | 0.531355 | 8_2:-58824488 | Msa1257840:CDS |
| TTGTTGTTGCTCACTATGCA+CGG | 0.531390 | 8_2:-58828649 | Msa1257840:CDS |
| TACATTGAAGCTTGTGAAAG+TGG | 0.531816 | 8_2:-58822739 | Msa1257840:CDS |
| GTTGCTCACTATGCACGGTT+CGG | 0.532612 | 8_2:-58828644 | Msa1257840:CDS |
| TAAGATAAAGTAGAAACTGT+TGG | 0.533052 | 8_2:-58820999 | Msa1257840:three_prime_UTR |
| GTTCTTGTGGCTGGTTCAAG+TGG | 0.537142 | 8_2:-58828523 | Msa1257840:CDS |
| TCGATTGCCGAGTGAGGTGG+TGG | 0.537147 | 8_2:-58828584 | Msa1257840:CDS |
| GACAAGAGTAAAGTAAAGGG+TGG | 0.537223 | 8_2:-58823295 | Msa1257840:CDS |
| GACAAGAGTAAAGTAAAGGG+TGG | 0.537223 | 8_2:-58824884 | Msa1257840:CDS |
| CCGTCTCCGCAATCTTCTCA+AGG | 0.541335 | 8_2:+58821765 | None:intergenic |
| GATCCTAGTTTGTCATTGTG+AGG | 0.542298 | 8_2:+58821977 | None:intergenic |
| TAAAGTAGAAACTGTTGGGT+AGG | 0.543063 | 8_2:-58820994 | Msa1257840:three_prime_UTR |
| TTTAACTGACCAAGAACTCC+GGG | 0.547153 | 8_2:+58823205 | None:intergenic |
| TTGCAACAGCGGTGTTTCTG+AGG | 0.547552 | 8_2:-58821293 | Msa1257840:CDS |
| GAGTCCCACTCTGAACGGTT+CGG | 0.548968 | 8_2:+58828613 | None:intergenic |
| TTATAGTGCTTAACTTTGTG+TGG | 0.550783 | 8_2:-58821197 | Msa1257840:exon |
| TTTGCAATTGAGAGAATGGT+TGG | 0.552160 | 8_2:-58820926 | Msa1257840:three_prime_UTR |
| CATGTATAGCAGCATGTGGT+GGG | 0.553960 | 8_2:-58821255 | Msa1257840:CDS |
| TAAGAGATTAGATCATCAAA+CGG | 0.556011 | 8_2:-58821804 | Msa1257840:CDS |
| TTGCGGAGACGGTGAAACAT+AGG | 0.557136 | 8_2:-58821754 | Msa1257840:CDS |
| TTATGTTGAACATATATTGG+AGG | 0.557765 | 8_2:+58821066 | None:intergenic |
| ATGCTGAGGTGGATGAAGTT+GGG | 0.557791 | 8_2:-58828558 | Msa1257840:CDS |
| TTATCAACAACTGGTATGCA+TGG | 0.558787 | 8_2:+58828299 | None:intergenic |
| TATACAAAAGATTACTAGGT+AGG | 0.561286 | 8_2:-58828934 | None:intergenic |
| CAAGTGATGTACTCTGGAGG+TGG | 0.562964 | 8_2:+58822607 | None:intergenic |
| AGGAACGCCGACATAAACAT+TGG | 0.566600 | 8_2:+58828171 | None:intergenic |
| ATTTATCTGCAGGATTACAC+TGG | 0.567542 | 8_2:-58823361 | Msa1257840:intron |
| GTTTGTCATTGTGAGGAGGA+AGG | 0.567849 | 8_2:+58821984 | None:intergenic |
| GAAAGTGGTAGCATGTTTGA+GGG | 0.570395 | 8_2:-58822724 | Msa1257840:CDS |
| GGAACGCCGACATAAACATT+GGG | 0.570758 | 8_2:+58828172 | None:intergenic |
| TGACCGAGTCCCACTCTGAA+CGG | 0.571238 | 8_2:+58828608 | None:intergenic |
| TTGATGATAACTCCAGGCCT+AGG | 0.571363 | 8_2:+58828208 | None:intergenic |
| GGTGGTGGATGATGCTGAGG+TGG | 0.571388 | 8_2:-58828569 | Msa1257840:CDS |
| ACGTTATATATGTTGGATTG+TGG | 0.573991 | 8_2:+58828840 | None:intergenic |
| GAAAAGCTATATTTGTACCA+AGG | 0.574916 | 8_2:-58822028 | Msa1257840:CDS |
| ATTTAACTGACCAAGAACTC+CGG | 0.577979 | 8_2:+58823204 | None:intergenic |
| TATGCCGTATGTATATGCTA+TGG | 0.580005 | 8_2:-58822909 | Msa1257840:CDS |
| AAATCCATAGCATATACATA+CGG | 0.584476 | 8_2:+58822905 | None:intergenic |
| TTGCAATTGAGAGAATGGTT+GGG | 0.585076 | 8_2:-58820925 | Msa1257840:three_prime_UTR |
| GCATGTATAGCAGCATGTGG+TGG | 0.587228 | 8_2:-58821256 | Msa1257840:CDS |
| CTATATCTGCAGGATTACAC+TGG | 0.587845 | 8_2:-58824950 | Msa1257840:intron |
| TTGGATTGTGGAGTCAGTGA+AGG | 0.589113 | 8_2:+58828852 | None:intergenic |
| CATTCGATTGCCGAGTGAGG+TGG | 0.590818 | 8_2:-58828587 | Msa1257840:CDS |
| TACCAGTTGTTGATAAAAGG+TGG | 0.594515 | 8_2:-58828292 | Msa1257840:CDS |
| GGTTGTTTGAAACTCACTGT+GGG | 0.596816 | 8_2:-58821363 | Msa1257840:CDS |
| GTTTGAGGGTGTCATGCCAA+AGG | 0.603641 | 8_2:-58822710 | Msa1257840:CDS |
| CAAGCACATCACAAGAAATG+TGG | 0.603856 | 8_2:-58820956 | Msa1257840:three_prime_UTR |
| GCATCATCCACCACCTCACT+CGG | 0.607629 | 8_2:+58828577 | None:intergenic |
| AGTTATCATCAACCATCCAC+AGG | 0.608153 | 8_2:-58828197 | Msa1257840:CDS |
| TTTGCGAACATTTGCAACAG+CGG | 0.609184 | 8_2:-58821304 | Msa1257840:CDS |
| ATTGAGAGAATGGTTGGGTG+AGG | 0.617217 | 8_2:-58820920 | Msa1257840:three_prime_UTR |
| CCTAGTTTGTCATTGTGAGG+AGG | 0.618985 | 8_2:+58821980 | None:intergenic |
| CGGTTGTTTGAAACTCACTG+TGG | 0.619149 | 8_2:-58821364 | Msa1257840:CDS |
| TGGATGAAGTTGGGACACGA+TGG | 0.620044 | 8_2:-58828549 | Msa1257840:CDS |
| GGGAACTTACTGTCCTGGAG+TGG | 0.620628 | 8_2:-58822638 | Msa1257840:CDS |
| AGAAATCCTTGAGAAGATTG+CGG | 0.621530 | 8_2:-58821771 | Msa1257840:CDS |
| AAGAAGAAACATGCATCTGG+AGG | 0.625535 | 8_2:-58822869 | Msa1257840:CDS |
| AAGAAGAAACATGCATCTGG+AGG | 0.625535 | 8_2:-58824448 | Msa1257840:CDS |
| TCATCAACAAGAGGTAGACC+AGG | 0.625602 | 8_2:+58821644 | None:intergenic |
| CAGGGACCCAATGTTTATGT+CGG | 0.627160 | 8_2:-58828178 | Msa1257840:CDS |
| GGATGGTTGATGATAACTCC+AGG | 0.627986 | 8_2:+58828202 | None:intergenic |
| AAAGTGCCATGCAAAACAAG+AGG | 0.629690 | 8_2:+58828812 | None:intergenic |
| GGATGAAGTTGGGACACGAT+GGG | 0.631186 | 8_2:-58828548 | Msa1257840:CDS |
| AGTAAAGGGTGGAAGTGGCA+AGG | 0.631546 | 8_2:-58823284 | Msa1257840:CDS |
| AGTAAAGGGTGGAAGTGGCA+AGG | 0.631546 | 8_2:-58824873 | Msa1257840:CDS |
| AAACATTGGGTCCCTGTGGA+TGG | 0.632954 | 8_2:+58828185 | None:intergenic |
| AGCTTGTTAAAGAATTGACT+AGG | 0.633857 | 8_2:+58828778 | None:intergenic |
| CCGTTGCAGGATCAAAACCT+TGG | 0.635618 | 8_2:+58822011 | None:intergenic |
| AATGCACAAGAGAGTAGTTG+GGG | 0.641706 | 8_2:-58822658 | Msa1257840:CDS |
| GAACCGTTCAGAGTGGGACT+CGG | 0.641812 | 8_2:-58828611 | Msa1257840:CDS |
| GTGAGCAACAACAACAGCCA+TGG | 0.644756 | 8_2:+58828658 | None:intergenic |
| GTGGGTCACTGACACAGTAT+GGG | 0.645354 | 8_2:-58821345 | Msa1257840:CDS |
| TTAACTGACCAAGAACTCCA+GGG | 0.654234 | 8_2:+58824795 | None:intergenic |
| TGAGGTGGTGGATGATGCTG+AGG | 0.654356 | 8_2:-58828572 | Msa1257840:CDS |
| AAGACCGAACCGTTCAGAGT+GGG | 0.657927 | 8_2:-58828617 | Msa1257840:CDS |
| GAATCATTTAGATGGTAGCG+TGG | 0.666047 | 8_2:-58821732 | Msa1257840:CDS |
| AAGTGCCATGCAAAACAAGA+GGG | 0.670742 | 8_2:+58828813 | None:intergenic |
| ACATAAACATTGGGTCCCTG+TGG | 0.672744 | 8_2:+58828181 | None:intergenic |
| AGGCAAGTGATGTACTCTGG+AGG | 0.687328 | 8_2:+58822604 | None:intergenic |
| AAGGCATGTATAGCAGCATG+TGG | 0.690392 | 8_2:-58821259 | Msa1257840:CDS |
| GTTATCATCAACCATCCACA+GGG | 0.690578 | 8_2:-58828196 | Msa1257840:CDS |
| CAAGACCGAACCGTTCAGAG+TGG | 0.697678 | 8_2:-58828618 | Msa1257840:CDS |
| TGGCCACAAAGATAGAACAC+CGG | 0.715258 | 8_2:+58828678 | None:intergenic |
| CTATTACATCCATCAAACAG+AGG | 0.726919 | 8_2:-58821220 | Msa1257840:CDS |
| ATATATTACTCCGATCATGG+AGG | 0.732812 | 8_2:-58823229 | Msa1257840:CDS |
| ATATATTACTCCGATCATGG+AGG | 0.732812 | 8_2:-58824818 | Msa1257840:CDS |
| TTAACTGACCAAGAACTCCG+GGG | 0.734941 | 8_2:+58823206 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCACAAAAAAAAAAAAAAT+TGG | + | chr8_2:58821667-58821686 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAACTTCTTATA+AGG | + | chr8_2:58822943-58822962 | None:intergenic | 10.0% |
| !!! | GTATAAAATTTATTTTTCAA+AGG | + | chr8_2:58823262-58823281 | None:intergenic | 10.0% |
| !! | ATATTTAATTATTAAGAGAA+GGG | + | chr8_2:58823315-58823334 | None:intergenic | 10.0% |
| !!! | CACATATTTTAAATTTATTT+TGG | - | chr8_2:58823518-58823537 | Msa1257840:intron | 10.0% |
| !!! | GTAATTTCATATTTTATAAT+AGG | - | chr8_2:58823541-58823560 | Msa1257840:intron | 10.0% |
| !! | TAGAAATAAAAAAAATATTG+AGG | - | chr8_2:58823699-58823718 | Msa1257840:intron | 10.0% |
| !! | AGAAATAAAAAAAATATTGA+GGG | - | chr8_2:58823700-58823719 | Msa1257840:intron | 10.0% |
| !!! | ATATATATTTTAACATAAGA+AGG | - | chr8_2:58823832-58823851 | Msa1257840:intron | 10.0% |
| !!! | TATATATTTTAACATAAGAA+GGG | - | chr8_2:58823833-58823852 | Msa1257840:intron | 10.0% |
| !!! | GTAATTTACTATTATTATTT+TGG | - | chr8_2:58824334-58824353 | Msa1257840:intron | 10.0% |
| !!! | GTAATTTACTATTATTATTT+TGG | - | chr8_2:58824334-58824353 | Msa1257840:intron | 10.0% |
| !!! | AATAAAAACATTTTATTTGT+AGG | - | chr8_2:58827312-58827331 | Msa1257840:intron | 10.0% |
| !! | AAGACAAATTAAATTAAATT+AGG | - | chr8_2:58828909-58828928 | Msa1257840:five_prime_UTR | 10.0% |
| !! | TATATAGTTTCTTAAGAAAA+AGG | + | chr8_2:58821911-58821930 | None:intergenic | 15.0% |
| !!! | ATATTTTTGTCTTAAACATT+GGG | + | chr8_2:58822142-58822161 | None:intergenic | 15.0% |
| !!! | TATATTTTTGTCTTAAACAT+TGG | + | chr8_2:58822143-58822162 | None:intergenic | 15.0% |
| !! | AGACAAAAATATAAAAATTC+TGG | - | chr8_2:58822150-58822169 | Msa1257840:intron | 15.0% |
| !!! | ATTTTTTGTAACATAAACAA+TGG | - | chr8_2:58822288-58822307 | Msa1257840:intron | 15.0% |
| !!! | CTTTTTGGTAATTTAATATT+TGG | + | chr8_2:58822383-58822402 | None:intergenic | 15.0% |
| !! | ATATTCTTAACATAAGTAAT+TGG | + | chr8_2:58822512-58822531 | None:intergenic | 15.0% |
| !! | AACTCTATCATTTAATATAT+GGG | + | chr8_2:58822627-58822646 | None:intergenic | 15.0% |
| !!! | GAAGTTTTTTTTTTTTTTTG+TGG | - | chr8_2:58822948-58822967 | Msa1257840:intron | 15.0% |
| !!! | AGAAGTTTTTTTTTTTTTTG+TGG | - | chr8_2:58823000-58823019 | Msa1257840:intron | 15.0% |
| !! | TAAATTACATAATATATGCA+AGG | + | chr8_2:58823048-58823067 | None:intergenic | 15.0% |
| !!! | TATTAGACTTATATTTTGAA+AGG | + | chr8_2:58823177-58823196 | None:intergenic | 15.0% |
| !!! | AAAATTTATTTTTCAAAGGT+GGG | + | chr8_2:58823258-58823277 | None:intergenic | 15.0% |
| !!! | TAAAATTTATTTTTCAAAGG+TGG | + | chr8_2:58823259-58823278 | None:intergenic | 15.0% |
| !! | TTATAATTCAAGAATCTTAA+GGG | + | chr8_2:58823291-58823310 | None:intergenic | 15.0% |
| !! | TATTTAATTATTAAGAGAAG+GGG | + | chr8_2:58823314-58823333 | None:intergenic | 15.0% |
| !! | CATATTTAATTATTAAGAGA+AGG | + | chr8_2:58823316-58823335 | None:intergenic | 15.0% |
| !! | TTATTAAAGTCGATTAAATA+TGG | + | chr8_2:58823493-58823512 | None:intergenic | 15.0% |
| !! | TTACTAAAGACAATAAAATA+CGG | - | chr8_2:58823950-58823969 | Msa1257840:intron | 15.0% |
| !!! | ATGAATTTATTTTTCTTAGA+TGG | - | chr8_2:58824070-58824089 | Msa1257840:intron | 15.0% |
| !! | TAGCAAGAATAAATTTAAAT+TGG | - | chr8_2:58824428-58824447 | Msa1257840:intron | 15.0% |
| !! | ATATATAAATATCCTATCTT+CGG | + | chr8_2:58824911-58824930 | None:intergenic | 15.0% |
| !! | TTACTAAAGACAATAAAATA+CGG | - | chr8_2:58823950-58823969 | Msa1257840:intron | 15.0% |
| !!! | ATGAATTTATTTTTCTTAGA+TGG | - | chr8_2:58824070-58824089 | Msa1257840:intron | 15.0% |
| !! | ATAGCAAGAATAATTTAAAT+TGG | - | chr8_2:58826025-58826044 | Msa1257840:intron | 15.0% |
| !! | ATATATAAATATCCTATCTT+CGG | + | chr8_2:58824911-58824930 | None:intergenic | 15.0% |
| !! | TGTCAATTCACAAAAAAATA+AGG | + | chr8_2:58821741-58821760 | None:intergenic | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | - | chr8_2:58821986-58822005 | Msa1257840:CDS | 20.0% |
| !! | GATATTATTTAGATTCGAAA+GGG | - | chr8_2:58822172-58822191 | Msa1257840:intron | 20.0% |
| !!! | ATTTTTGTTCAACATAGAAA+TGG | + | chr8_2:58822261-58822280 | None:intergenic | 20.0% |
| !! | ATTTCTATGTTGAACAAAAA+TGG | - | chr8_2:58822260-58822279 | Msa1257840:CDS | 20.0% |
| !! | CAACTCTATCATTTAATATA+TGG | + | chr8_2:58822628-58822647 | None:intergenic | 20.0% |
| !!! | ATAAGAAGCTTTTTTTTTTG+TGG | - | chr8_2:58822846-58822865 | Msa1257840:intron | 20.0% |
| !!! | GTTTTTTTTTTTTTTTGTGG+TGG | - | chr8_2:58822951-58822970 | Msa1257840:intron | 20.0% |
| !!! | AGTTTTTTTTTTTTTTGTGG+TGG | - | chr8_2:58823003-58823022 | Msa1257840:intron | 20.0% |
| !! | GTTATAATTCAAGAATCTTA+AGG | + | chr8_2:58823292-58823311 | None:intergenic | 20.0% |
| !! | GAAAAATATGTATTCAAAAC+TGG | - | chr8_2:58823606-58823625 | Msa1257840:intron | 20.0% |
| !!! | TCTAATATCTTTTGAATAAG+AGG | - | chr8_2:58823801-58823820 | Msa1257840:intron | 20.0% |
| !!! | CTAATATCTTTTGAATAAGA+GGG | - | chr8_2:58823802-58823821 | Msa1257840:intron | 20.0% |
| !!! | TAATATCTTTTGAATAAGAG+GGG | - | chr8_2:58823803-58823822 | Msa1257840:intron | 20.0% |
| !!! | AATTTATTTTTCTTAGATGG+TGG | - | chr8_2:58824073-58824092 | Msa1257840:intron | 20.0% |
| !!! | TAAATTTTACTTTTCAAGAG+AGG | - | chr8_2:58824216-58824235 | Msa1257840:intron | 20.0% |
| !!! | TATATTTTAACATAAGAGAG+AGG | - | chr8_2:58824245-58824264 | Msa1257840:intron | 20.0% |
| !! | TGTAATTCAATCATCTTTAA+AGG | - | chr8_2:58824302-58824321 | Msa1257840:intron | 20.0% |
| !! | GTAATTCAATCATCTTTAAA+GGG | - | chr8_2:58824303-58824322 | Msa1257840:intron | 20.0% |
| !!! | TACTATTATTATTTTGGAAC+CGG | - | chr8_2:58824340-58824359 | Msa1257840:intron | 20.0% |
| !!! | TTGAATTTGATAACGTAAAT+TGG | - | chr8_2:58824598-58824617 | Msa1257840:intron | 20.0% |
| !!! | TTTTTTTAGTATAACAGTGA+AGG | - | chr8_2:58824694-58824713 | Msa1257840:intron | 20.0% |
| !! | CAATGAATTTAATAATGTCA+TGG | - | chr8_2:58825044-58825063 | Msa1257840:intron | 20.0% |
| !! | TCATATGATCAATTTCTATA+AGG | + | chr8_2:58825107-58825126 | None:intergenic | 20.0% |
| !!! | ATGGTAATATTTCATTTTTC+CGG | - | chr8_2:58825328-58825347 | Msa1257840:intron | 20.0% |
| !!! | AATTTATTTTTCTTAGATGG+TGG | - | chr8_2:58824073-58824092 | Msa1257840:intron | 20.0% |
| !!! | TAAATTTTACTTTTCAAGAG+AGG | - | chr8_2:58824216-58824235 | Msa1257840:intron | 20.0% |
| !!! | TATATTTTAACATAAGAGAG+AGG | - | chr8_2:58824245-58824264 | Msa1257840:intron | 20.0% |
| !! | AGTGTATATTTAACATAAGA+TGG | - | chr8_2:58825868-58825887 | Msa1257840:intron | 20.0% |
| !! | GTGTATATTTAACATAAGAT+GGG | - | chr8_2:58825869-58825888 | Msa1257840:intron | 20.0% |
| !! | TGTAATTCAAACATCTTTAA+AGG | - | chr8_2:58825899-58825918 | Msa1257840:intron | 20.0% |
| !! | GTAATTCAAACATCTTTAAA+GGG | - | chr8_2:58825900-58825919 | Msa1257840:intron | 20.0% |
| !!! | TACTATTATTATTTTGGAAC+CGG | - | chr8_2:58824340-58824359 | Msa1257840:intron | 20.0% |
| !!! | TTTGATTTGATAACGTAAAT+TGG | - | chr8_2:58826190-58826209 | Msa1257840:intron | 20.0% |
| !! | ACATGAATTTAATAATGTCA+TGG | - | chr8_2:58826626-58826645 | Msa1257840:intron | 20.0% |
| !! | TCATATGATCAATTTCTATA+AGG | + | chr8_2:58825107-58825126 | None:intergenic | 20.0% |
| !!! | ATGGTAATATTTCATTTTTC+CGG | - | chr8_2:58825328-58825347 | Msa1257840:intron | 20.0% |
| !!! | AAAAAATGTCACTTTATGTT+TGG | - | chr8_2:58826945-58826964 | Msa1257840:intron | 20.0% |
| !! | ATTACATTATTTCAAATGGT+TGG | + | chr8_2:58827215-58827234 | None:intergenic | 20.0% |
| !! | AAGCATTACATTATTTCAAA+TGG | + | chr8_2:58827219-58827238 | None:intergenic | 20.0% |
| !! | AACTCAAAAAGTTTGTAATT+TGG | + | chr8_2:58827339-58827358 | None:intergenic | 20.0% |
| !!! | CTATTTGGAGATTTTTAAAT+AGG | + | chr8_2:58827367-58827386 | None:intergenic | 20.0% |
| !!! | TTATGTTTTAATTTTTGTGC+AGG | - | chr8_2:58827612-58827631 | Msa1257840:intron | 20.0% |
| !!! | ATTTGGTTGATAATAAGTTA+AGG | + | chr8_2:58827860-58827879 | None:intergenic | 20.0% |
| !! | TTGATAAAATATAATCAGTG+TGG | - | chr8_2:58828254-58828273 | Msa1257840:CDS | 20.0% |
| !! | CTTATTAGTATAACATACAA+TGG | - | chr8_2:58828319-58828338 | Msa1257840:intron | 20.0% |
| !! | ACATTATGTTGAACATATAT+TGG | + | chr8_2:58828683-58828702 | None:intergenic | 20.0% |
| !!! | GATGATTGTTTTAGTATTTT+TGG | - | chr8_2:58828845-58828864 | Msa1257840:five_prime_UTR | 20.0% |
| ! | TAACCAAAAAACGAAAAGAA+GGG | + | chr8_2:58821018-58821037 | None:intergenic | 25.0% |
| ! | ATAACCAAAAAACGAAAAGA+AGG | + | chr8_2:58821019-58821038 | None:intergenic | 25.0% |
| !!! | TTCTTTTCGTTTTTTGGTTA+TGG | - | chr8_2:58821018-58821037 | Msa1257840:three_prime_UTR | 25.0% |
| !! | CATAGCAAAAATATGTTTTC+CGG | - | chr8_2:58821046-58821065 | Msa1257840:three_prime_UTR | 25.0% |
| ! | AAATGTCGAAATTGTTATGT+CGG | + | chr8_2:58821344-58821363 | None:intergenic | 25.0% |
| !!! | TGTGTTATGTTTTAATGAGT+TGG | - | chr8_2:58821398-58821417 | Msa1257840:intron | 25.0% |
| !!! | CTTATTGGTTTAAATCATTG+TGG | - | chr8_2:58821985-58822004 | Msa1257840:CDS | 25.0% |
| ! | GGATATTATTTAGATTCGAA+AGG | - | chr8_2:58822171-58822190 | Msa1257840:intron | 25.0% |
| !!! | AAGTTTTGAGAAAGAGAAAA+AGG | - | chr8_2:58822196-58822215 | Msa1257840:intron | 25.0% |
| ! | TCAATTAATACAACTACTAG+TGG | - | chr8_2:58822317-58822336 | Msa1257840:intron | 25.0% |
| ! | TTGGAATTAATTAGAGGAAT+TGG | - | chr8_2:58822564-58822583 | Msa1257840:intron | 25.0% |
| ! | CTATCATTTAATATATGGGA+CGG | + | chr8_2:58822623-58822642 | None:intergenic | 25.0% |
| ! | ATAAGTCGATTAATATGAGA+CGG | - | chr8_2:58822792-58822811 | Msa1257840:intron | 25.0% |
| ! | AAAAAACTTCTTATAAGGTC+CGG | + | chr8_2:58822991-58823010 | None:intergenic | 25.0% |
| !! | AGACTAGACTAAATACATTT+TGG | + | chr8_2:58823140-58823159 | None:intergenic | 25.0% |
| ! | TCAAATAAAAATAGCATTGC+AGG | + | chr8_2:58823648-58823667 | None:intergenic | 25.0% |
| !!! | AGTGTAGATTTTAACATAAG+AGG | - | chr8_2:58823728-58823747 | Msa1257840:intron | 25.0% |
| !!! | GTGTAGATTTTAACATAAGA+GGG | - | chr8_2:58823729-58823748 | Msa1257840:intron | 25.0% |
| !!! | TGTAGATTTTAACATAAGAG+GGG | - | chr8_2:58823730-58823749 | Msa1257840:intron | 25.0% |
| ! | TGTAATTAAAGCTTCTTTCA+AGG | - | chr8_2:58823760-58823779 | Msa1257840:intron | 25.0% |
| ! | GTAATTAAAGCTTCTTTCAA+GGG | - | chr8_2:58823761-58823780 | Msa1257840:intron | 25.0% |
| !!! | ATATTTTAACATAAGAAGGG+AGG | - | chr8_2:58823836-58823855 | Msa1257840:intron | 25.0% |
| ! | TTGTAATTCATGCATCTTAT+AGG | - | chr8_2:58824182-58824201 | Msa1257840:intron | 25.0% |
| !!! | ACTATTATTATTTTGGAACC+GGG | - | chr8_2:58824341-58824360 | Msa1257840:intron | 25.0% |
| !! | TTGTTCAAAAGTCTTTAGAA+AGG | - | chr8_2:58824642-58824661 | Msa1257840:intron | 25.0% |
| ! | TTTATATATTACTCCGATCA+TGG | - | chr8_2:58824922-58824941 | Msa1257840:CDS | 25.0% |
| ! | TGATTAAACTTAGTTCAACT+AGG | - | chr8_2:58825174-58825193 | Msa1257840:intron | 25.0% |
| ! | AAATCCATAGCATATACATA+TGG | + | chr8_2:58825262-58825281 | None:intergenic | 25.0% |
| ! | AGTTGTAATCATGATCTTAT+AGG | - | chr8_2:58825780-58825799 | Msa1257840:intron | 25.0% |
| !!! | ACTATTATTATTTTGGAACC+GGG | - | chr8_2:58824341-58824360 | Msa1257840:intron | 25.0% |
| !!! | TTTTTTTAGTACAACAGTGA+AGG | - | chr8_2:58826286-58826305 | Msa1257840:intron | 25.0% |
| ! | TTTATATATTACTCCGATCA+TGG | - | chr8_2:58824922-58824941 | Msa1257840:CDS | 25.0% |
| ! | TGATTAAACTTAGTTCAACT+AGG | - | chr8_2:58825174-58825193 | Msa1257840:intron | 25.0% |
| ! | AAATCCATAGCATATACATA+CGG | + | chr8_2:58825262-58825281 | None:intergenic | 25.0% |
| !! | TTTTTACAAGCATCATTTAC+CGG | + | chr8_2:58826929-58826948 | None:intergenic | 25.0% |
| ! | ACATAAACATTAAGATCCTT+TGG | + | chr8_2:58827052-58827071 | None:intergenic | 25.0% |
| ! | TTCATTTCAAACATTTCCTT+TGG | - | chr8_2:58827442-58827461 | Msa1257840:intron | 25.0% |
| ! | AATTACAACAACTATGCATT+AGG | - | chr8_2:58827652-58827671 | Msa1257840:intron | 25.0% |
| !! | TTGATAATAAGTTAAGGTTG+AGG | + | chr8_2:58827854-58827873 | None:intergenic | 25.0% |
| ! | ATCTAATCTCTTATACTGAA+AGG | + | chr8_2:58827932-58827951 | None:intergenic | 25.0% |
| ! | TAAGAGATTAGATCATCAAA+CGG | - | chr8_2:58827939-58827958 | Msa1257840:intron | 25.0% |
| ! | AAACATAGGAATCATTTAGA+TGG | - | chr8_2:58828003-58828022 | Msa1257840:intron | 25.0% |
| ! | TTATGTTGAACATATATTGG+AGG | + | chr8_2:58828680-58828699 | None:intergenic | 25.0% |
| ! | AACAGTTTCTACTTTATCTT+AGG | + | chr8_2:58828745-58828764 | None:intergenic | 25.0% |
| ! | TAAGATAAAGTAGAAACTGT+TGG | - | chr8_2:58828744-58828763 | Msa1257840:exon | 25.0% |
| ! | AAGATAAAGTAGAAACTGTT+GGG | - | chr8_2:58828745-58828764 | Msa1257840:exon | 25.0% |
| ACGTTATATATGTTGGATTG+TGG | + | chr8_2:58820906-58820925 | None:intergenic | 30.0% | |
| !! | AGCTTGTTAAAGAATTGACT+AGG | + | chr8_2:58820968-58820987 | None:intergenic | 30.0% |
| !!! | TTTTCGTTTTTTGGTTATGG+CGG | - | chr8_2:58821021-58821040 | Msa1257840:three_prime_UTR | 30.0% |
| !!! | AATGAGTTGGTTTTGATTAC+AGG | - | chr8_2:58821411-58821430 | Msa1257840:intron | 30.0% |
| !! | GAATTTTCAAGCCAAATTGA+TGG | - | chr8_2:58821687-58821706 | Msa1257840:CDS | 30.0% |
| TCTATTACTCACTCTCTTAT+TGG | - | chr8_2:58821970-58821989 | Msa1257840:CDS | 30.0% | |
| AAATCTCACATAATCCTCTA+AGG | + | chr8_2:58822232-58822251 | None:intergenic | 30.0% | |
| ! | AGGATTATGTGAGATTTGTT+TGG | - | chr8_2:58822235-58822254 | Msa1257840:intron | 30.0% |
| GGCACTTAAAAAAAGTTACA+AGG | - | chr8_2:58822338-58822357 | Msa1257840:intron | 30.0% | |
| !!! | CATTGGAGCATTTTAATTAG+TGG | - | chr8_2:58822451-58822470 | Msa1257840:intron | 30.0% |
| ! | TTAAGAATATTTTGTCCCTC+TGG | - | chr8_2:58822522-58822541 | Msa1257840:intron | 30.0% |
| !! | AATTATGATGGATACAGCAA+GGG | + | chr8_2:58822592-58822611 | None:intergenic | 30.0% |
| !!! | AGAAGCTTTTTTTTTTGTGG+TGG | - | chr8_2:58822849-58822868 | Msa1257840:intron | 30.0% |
| AAAAACTTCTTATAAGGTCC+GGG | + | chr8_2:58822990-58823009 | None:intergenic | 30.0% | |
| TACATAATATATGCAAGGTC+CGG | + | chr8_2:58823043-58823062 | None:intergenic | 30.0% | |
| AATTCAAGAATCTTAAGGGA+GGG | + | chr8_2:58823287-58823306 | None:intergenic | 30.0% | |
| TAATTCAAGAATCTTAAGGG+AGG | + | chr8_2:58823288-58823307 | None:intergenic | 30.0% | |
| TGTAATTCAAGCATCTTTGA+AGG | - | chr8_2:58823863-58823882 | Msa1257840:intron | 30.0% | |
| GTAATTCAAGCATCTTTGAA+GGG | - | chr8_2:58823864-58823883 | Msa1257840:intron | 30.0% | |
| ! | ATTCAATCATCTTTAAAGGG+AGG | - | chr8_2:58824306-58824325 | Msa1257840:intron | 30.0% |
| AGTTTCTTGCACATAGATTA+AGG | + | chr8_2:58824491-58824510 | None:intergenic | 30.0% | |
| ! | TAAGACTAATCTTTCGAGTA+TGG | - | chr8_2:58825010-58825029 | Msa1257840:intron | 30.0% |
| ATTGCAAGTATTACAGTTTG+CGG | - | chr8_2:58825070-58825089 | Msa1257840:intron | 30.0% | |
| ! | AGTGATTCTCTTTTTGATGT+AGG | - | chr8_2:58825223-58825242 | Msa1257840:intron | 30.0% |
| ! | GTGATTCTCTTTTTGATGTA+GGG | - | chr8_2:58825224-58825243 | Msa1257840:intron | 30.0% |
| GCATATACATATGGCATATT+TGG | + | chr8_2:58825253-58825272 | None:intergenic | 30.0% | |
| TATGCCATATGTATATGCTA+TGG | - | chr8_2:58825255-58825274 | Msa1257840:intron | 30.0% | |
| TGTAATTCAAGCATCTTTGA+AGG | - | chr8_2:58823863-58823882 | Msa1257840:intron | 30.0% | |
| GTAATTCAAGCATCTTTGAA+GGG | - | chr8_2:58823864-58823883 | Msa1257840:intron | 30.0% | |
| TAATCATGATCTTATAGGAG+AGG | - | chr8_2:58825785-58825804 | Msa1257840:intron | 30.0% | |
| !!! | CTATTATTATTTTGGAACCG+GGG | - | chr8_2:58824342-58824361 | Msa1257840:intron | 30.0% |
| !!! | TATTATTATTTTGGAACCGG+GGG | - | chr8_2:58824343-58824362 | Msa1257840:intron | 30.0% |
| AGTTTCTTGCACATAGATTA+AGG | + | chr8_2:58824491-58824510 | None:intergenic | 30.0% | |
| TTGTTCAAAAGTCTTTAGTG+AGG | - | chr8_2:58826234-58826253 | Msa1257840:intron | 30.0% | |
| CTTATTCTCTATTTATCTGC+AGG | - | chr8_2:58826372-58826391 | Msa1257840:intron | 30.0% | |
| GTGTTAAGAATCTTTGAGTA+TGG | - | chr8_2:58826594-58826613 | Msa1257840:intron | 30.0% | |
| ACATCAAAAAGAGAATCACT+TGG | + | chr8_2:58825223-58825242 | None:intergenic | 30.0% | |
| ! | AGTGATTCTCTTTTTGATGT+AGG | - | chr8_2:58825223-58825242 | Msa1257840:intron | 30.0% |
| ! | GTGATTCTCTTTTTGATGTA+GGG | - | chr8_2:58825224-58825243 | Msa1257840:intron | 30.0% |
| TAATTTGGTCCCTGAATTTA+GGG | + | chr8_2:58827264-58827283 | None:intergenic | 30.0% | |
| ! | ACGTACACTTGTTAATTACT+CGG | + | chr8_2:58827402-58827421 | None:intergenic | 30.0% |
| GGTGAAACAACAATACAAAT+CGG | - | chr8_2:58827506-58827525 | Msa1257840:intron | 30.0% | |
| AACAACAATACAAATCGGTA+AGG | - | chr8_2:58827511-58827530 | Msa1257840:intron | 30.0% | |
| ! | TTTTTGTGCAGGTTAAAGAA+CGG | - | chr8_2:58827623-58827642 | Msa1257840:intron | 30.0% |
| ! | TAGCTTTTCATCTGTAATGT+TGG | + | chr8_2:58827704-58827723 | None:intergenic | 30.0% |
| GAAAAGCTATATTTGTACCA+AGG | - | chr8_2:58827715-58827734 | Msa1257840:intron | 30.0% | |
| TGACAAACTAGGATCTAAAA+TGG | - | chr8_2:58827774-58827793 | Msa1257840:intron | 30.0% | |
| ATAAAATCTCTGCATCTCTT+TGG | + | chr8_2:58827810-58827829 | None:intergenic | 30.0% | |
| ! | ATGCAGAGATTTTATTCATG+TGG | - | chr8_2:58827815-58827834 | Msa1257840:intron | 30.0% |
| ! | TGCAGAGATTTTATTCATGT+GGG | - | chr8_2:58827816-58827835 | Msa1257840:intron | 30.0% |
| ! | GATTTTATTCATGTGGGAAA+TGG | - | chr8_2:58827822-58827841 | Msa1257840:intron | 30.0% |
| CAATCATTTGAACAAGGATT+TGG | + | chr8_2:58827877-58827896 | None:intergenic | 30.0% | |
| ! | TTGATTGGAGTTTTACTGTT+TGG | - | chr8_2:58828036-58828055 | Msa1257840:intron | 30.0% |
| ATTGGGAATGCTTAAAATCA+AGG | - | chr8_2:58828121-58828140 | Msa1257840:intron | 30.0% | |
| TTGGGAATGCTTAAAATCAA+GGG | - | chr8_2:58828122-58828141 | Msa1257840:intron | 30.0% | |
| TAAGTTATGAAGACAGATGT+CGG | + | chr8_2:58828303-58828322 | None:intergenic | 30.0% | |
| TTATAGTGCTTAACTTTGTG+TGG | - | chr8_2:58828546-58828565 | Msa1257840:CDS | 30.0% | |
| ! | GTAATTTGCAATTGAGAGAA+TGG | - | chr8_2:58828813-58828832 | Msa1257840:five_prime_UTR | 30.0% |
| AAGAAGGGCTCATAAAAACA+GGG | + | chr8_2:58821003-58821022 | None:intergenic | 35.0% | |
| AAAGAAGGGCTCATAAAAAC+AGG | + | chr8_2:58821004-58821023 | None:intergenic | 35.0% | |
| AGAAACTGATTGAACTCACT+TGG | + | chr8_2:58821264-58821283 | None:intergenic | 35.0% | |
| TTATCAACAACTGGTATGCA+TGG | + | chr8_2:58821447-58821466 | None:intergenic | 35.0% | |
| ! | GCATACCAGTTGTTGATAAA+AGG | - | chr8_2:58821448-58821467 | Msa1257840:intron | 35.0% |
| ! | TACCAGTTGTTGATAAAAGG+TGG | - | chr8_2:58821451-58821470 | Msa1257840:intron | 35.0% |
| ! | CAGAAAACGTAAAGTACCTT+AGG | + | chr8_2:58821595-58821614 | None:intergenic | 35.0% |
| ! | AGGTACTTTACGTTTTCTGT+TGG | - | chr8_2:58821596-58821615 | Msa1257840:intron | 35.0% |
| TGTAATGTCGACCATCAATT+TGG | + | chr8_2:58821701-58821720 | None:intergenic | 35.0% | |
| !!! | GCTCTCTCTGTTTTTTTGTT+TGG | - | chr8_2:58821861-58821880 | Msa1257840:intron | 35.0% |
| AAAATTGACCTCACACAAAG+TGG | - | chr8_2:58822020-58822039 | Msa1257840:CDS | 35.0% | |
| ! | TCTAGCACTCACTGTTTTAT+TGG | + | chr8_2:58822067-58822086 | None:intergenic | 35.0% |
| TCATTCCTCATAATCCTCTA+AGG | - | chr8_2:58822114-58822133 | Msa1257840:intron | 35.0% | |
| CATTCCTCATAATCCTCTAA+GGG | - | chr8_2:58822115-58822134 | Msa1257840:intron | 35.0% | |
| ! | CATTCAAGTGCGTTTCTTTT+TGG | + | chr8_2:58822398-58822417 | None:intergenic | 35.0% |
| CAAAAAGAAACGCACTTGAA+TGG | - | chr8_2:58822396-58822415 | Msa1257840:intron | 35.0% | |
| TTCTTCACTCAAGTCTTTGA+TGG | - | chr8_2:58822422-58822441 | Msa1257840:intron | 35.0% | |
| !! | CAATTATGATGGATACAGCA+AGG | + | chr8_2:58822593-58822612 | None:intergenic | 35.0% |
| CATTTAATATATGGGACGGA+AGG | + | chr8_2:58822619-58822638 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTGTGGTGGCTG+AGG | - | chr8_2:58822957-58822976 | Msa1257840:intron | 35.0% |
| AAAACTTCTTATAAGGTCCG+GGG | + | chr8_2:58822989-58823008 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTGTGGTGGCTG+AGG | - | chr8_2:58822957-58822976 | Msa1257840:intron | 35.0% |
| ACATAATATATGCAAGGTCC+GGG | + | chr8_2:58823042-58823061 | None:intergenic | 35.0% | |
| ATTCAAGAATCTTAAGGGAG+GGG | + | chr8_2:58823286-58823305 | None:intergenic | 35.0% | |
| !! | AGATTTTAACATAAGAGGGG+AGG | - | chr8_2:58823733-58823752 | Msa1257840:intron | 35.0% |
| !! | GATTTTAACATAAGAGGGGA+GGG | - | chr8_2:58823734-58823753 | Msa1257840:intron | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | - | chr8_2:58823735-58823754 | Msa1257840:intron | 35.0% |
| ATTAAAGCTTCTTTCAAGGG+AGG | - | chr8_2:58823764-58823783 | Msa1257840:intron | 35.0% | |
| TTAAAGCTTCTTTCAAGGGA+GGG | - | chr8_2:58823765-58823784 | Msa1257840:intron | 35.0% | |
| ! | TATCTTTTGAATAAGAGGGG+AGG | - | chr8_2:58823806-58823825 | Msa1257840:intron | 35.0% |
| ! | ATCTTTTGAATAAGAGGGGA+GGG | - | chr8_2:58823807-58823826 | Msa1257840:intron | 35.0% |
| ATTCATGCATCTTATAGGAG+AGG | - | chr8_2:58824187-58824206 | Msa1257840:intron | 35.0% | |
| AAAGATCAAATGTACTCTCC+CGG | + | chr8_2:58824362-58824381 | None:intergenic | 35.0% | |
| TGGTCTCATGAAGCAATAAT+TGG | - | chr8_2:58824618-58824637 | Msa1257840:intron | 35.0% | |
| GGTCTCATGAAGCAATAATT+GGG | - | chr8_2:58824619-58824638 | Msa1257840:intron | 35.0% | |
| TATAACAGTGAAGGTTGTCT+TGG | - | chr8_2:58824703-58824722 | Msa1257840:intron | 35.0% | |
| ATAACAGTGAAGGTTGTCTT+GGG | - | chr8_2:58824704-58824723 | Msa1257840:intron | 35.0% | |
| !! | TCTTTTGCGCTATTTCACTT+TGG | - | chr8_2:58824754-58824773 | Msa1257840:intron | 35.0% |
| !! | CTTTTGCGCTATTTCACTTT+GGG | - | chr8_2:58824755-58824774 | Msa1257840:intron | 35.0% |
| CTTATTCTCTCTATATCTGC+AGG | - | chr8_2:58824783-58824802 | Msa1257840:intron | 35.0% | |
| TGGAGACAAGAGTAAAGTAA+AGG | - | chr8_2:58824855-58824874 | Msa1257840:CDS | 35.0% | |
| GGAGACAAGAGTAAAGTAAA+GGG | - | chr8_2:58824856-58824875 | Msa1257840:CDS | 35.0% | |
| ATATATTACTCCGATCATGG+AGG | - | chr8_2:58824925-58824944 | Msa1257840:CDS | 35.0% | |
| TAGTTCAACTAGGTTTGTCT+TGG | - | chr8_2:58825184-58825203 | Msa1257840:intron | 35.0% | |
| AGTTCAACTAGGTTTGTCTT+GGG | - | chr8_2:58825185-58825204 | Msa1257840:intron | 35.0% | |
| TTGAAGAAGAAACATGCATC+TGG | - | chr8_2:58825292-58825311 | Msa1257840:intron | 35.0% | |
| ATCTGGAGGTTACAAAAAGA+TGG | - | chr8_2:58825309-58825328 | Msa1257840:intron | 35.0% | |
| ATTTATCTGCAGGATTACAC+TGG | - | chr8_2:58826382-58826401 | Msa1257840:intron | 35.0% | |
| TGGAGACAAGAGTAAAGTAA+AGG | - | chr8_2:58824855-58824874 | Msa1257840:CDS | 35.0% | |
| GGAGACAAGAGTAAAGTAAA+GGG | - | chr8_2:58824856-58824875 | Msa1257840:CDS | 35.0% | |
| ATATATTACTCCGATCATGG+AGG | - | chr8_2:58824925-58824944 | Msa1257840:CDS | 35.0% | |
| ATTTAACTGACCAAGAACTC+CGG | + | chr8_2:58824953-58824972 | None:intergenic | 35.0% | |
| TAGTTCAACTAGGTGTGTAT+TGG | - | chr8_2:58826763-58826782 | Msa1257840:intron | 35.0% | |
| AGTTCAACTAGGTGTGTATT+GGG | - | chr8_2:58826764-58826783 | Msa1257840:intron | 35.0% | |
| GCATATACATACGGCATATT+TGG | + | chr8_2:58826832-58826851 | None:intergenic | 35.0% | |
| TATGCCGTATGTATATGCTA+TGG | - | chr8_2:58826834-58826853 | Msa1257840:intron | 35.0% | |
| TTGAAGAAGAAACATGCATC+TGG | - | chr8_2:58825292-58825311 | Msa1257840:intron | 35.0% | |
| ATCTGGAGGTTACAAAAAGA+TGG | - | chr8_2:58825309-58825328 | Msa1257840:intron | 35.0% | |
| ! | GTGTGATTTTGTGCTTGTAT+AGG | - | chr8_2:58826976-58826995 | Msa1257840:intron | 35.0% |
| TACATTGAAGCTTGTGAAAG+TGG | - | chr8_2:58827004-58827023 | Msa1257840:intron | 35.0% | |
| !! | TTTGTATAGTGTTGCTTGGA+TGG | - | chr8_2:58827168-58827187 | Msa1257840:intron | 35.0% |
| ATGTTTGCATCCCTAAATTC+AGG | - | chr8_2:58827251-58827270 | Msa1257840:intron | 35.0% | |
| TGTTTGCATCCCTAAATTCA+GGG | - | chr8_2:58827252-58827271 | Msa1257840:intron | 35.0% | |
| GTAATTTGGTCCCTGAATTT+AGG | + | chr8_2:58827265-58827284 | None:intergenic | 35.0% | |
| ! | ACACTTGTTAATTACTCGGT+AGG | + | chr8_2:58827398-58827417 | None:intergenic | 35.0% |
| GCACAATCTAAAAAGGGAAA+CGG | - | chr8_2:58827485-58827504 | Msa1257840:intron | 35.0% | |
| AGTATCCCTATTAGCATTTC+AGG | - | chr8_2:58827561-58827580 | Msa1257840:intron | 35.0% | |
| CTTCTCCTGAAATGCTAATA+GGG | + | chr8_2:58827569-58827588 | None:intergenic | 35.0% | |
| TCTTCTCCTGAAATGCTAAT+AGG | + | chr8_2:58827570-58827589 | None:intergenic | 35.0% | |
| ACTGCACAATCATTTGAACA+AGG | + | chr8_2:58827883-58827902 | None:intergenic | 35.0% | |
| AGAAATCCTTGAGAAGATTG+CGG | - | chr8_2:58827972-58827991 | Msa1257840:intron | 35.0% | |
| TTACTGTTTGGTCCAACAAA+AGG | - | chr8_2:58828048-58828067 | Msa1257840:intron | 35.0% | |
| ! | AGAACTGAAGAACCTTTTGT+TGG | + | chr8_2:58828063-58828082 | None:intergenic | 35.0% |
| AAAAGGTTCTTCAGTTCTAC+AGG | - | chr8_2:58828065-58828084 | Msa1257840:intron | 35.0% | |
| !! | TCTACCTCTTGTTGATGATT+GGG | - | chr8_2:58828104-58828123 | Msa1257840:intron | 35.0% |
| TACGTTATCGATGTTCGATT+TGG | - | chr8_2:58828345-58828364 | Msa1257840:intron | 35.0% | |
| !!! | GATGTTCGATTTGGTTTTGT+AGG | - | chr8_2:58828354-58828373 | Msa1257840:intron | 35.0% |
| !!! | TCGATTTGGTTTTGTAGGTT+CGG | - | chr8_2:58828359-58828378 | Msa1257840:intron | 35.0% |
| CTATTACATCCATCAAACAG+AGG | - | chr8_2:58828523-58828542 | Msa1257840:CDS | 35.0% | |
| TTTAGTTGTGAAGAGTAAGC+AGG | - | chr8_2:58828715-58828734 | Msa1257840:CDS | 35.0% | |
| TAAAGTAGAAACTGTTGGGT+AGG | - | chr8_2:58828749-58828768 | Msa1257840:exon | 35.0% | |
| TTTGCAATTGAGAGAATGGT+TGG | - | chr8_2:58828817-58828836 | Msa1257840:five_prime_UTR | 35.0% | |
| TTGCAATTGAGAGAATGGTT+GGG | - | chr8_2:58828818-58828837 | Msa1257840:five_prime_UTR | 35.0% | |
| GGGTGACACGTTATATATGT+TGG | + | chr8_2:58820913-58820932 | None:intergenic | 40.0% | |
| AAGTGCCATGCAAAACAAGA+GGG | + | chr8_2:58820933-58820952 | None:intergenic | 40.0% | |
| ! | AAAGTGCCATGCAAAACAAG+AGG | + | chr8_2:58820934-58820953 | None:intergenic | 40.0% |
| AGAAGGGCTCATAAAAACAG+GGG | + | chr8_2:58821002-58821021 | None:intergenic | 40.0% | |
| !! | GAGCCCTTCTTTTCGTTTTT+TGG | - | chr8_2:58821012-58821031 | Msa1257840:three_prime_UTR | 40.0% |
| TTTCCGGTGTTCTATCTTTG+TGG | - | chr8_2:58821062-58821081 | Msa1257840:three_prime_UTR | 40.0% | |
| ! | TTGTTGTTGCTCACTATGCA+CGG | - | chr8_2:58821094-58821113 | Msa1257840:three_prime_UTR | 40.0% |
| ! | CTCCACCTTTTATCAACAAC+TGG | + | chr8_2:58821456-58821475 | None:intergenic | 40.0% |
| AGTTATCATCAACCATCCAC+AGG | - | chr8_2:58821546-58821565 | Msa1257840:intron | 40.0% | |
| GTTATCATCAACCATCCACA+GGG | - | chr8_2:58821547-58821566 | Msa1257840:intron | 40.0% | |
| GATGGTCGACATTACAAGTA+TGG | - | chr8_2:58821705-58821724 | Msa1257840:CDS | 40.0% | |
| TTAAACATTGGGTCCCTTAG+AGG | + | chr8_2:58822131-58822150 | None:intergenic | 40.0% | |
| !! | TCACATAATCCTCTAAGGCA+CGG | + | chr8_2:58822227-58822246 | None:intergenic | 40.0% |
| ! | CTGGCGTTGGAATTAATTAG+AGG | - | chr8_2:58822558-58822577 | Msa1257840:intron | 40.0% |
| ACGGAAGGAGTCAATTATGA+TGG | + | chr8_2:58822604-58822623 | None:intergenic | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | + | chr8_2:58823041-58823060 | None:intergenic | 40.0% | |
| ! | ATTCAAGCATCTTTGAAGGG+AGG | - | chr8_2:58823867-58823886 | Msa1257840:intron | 40.0% |
| ! | GGGAGAGTACATTTGATCTT+TGG | - | chr8_2:58824361-58824380 | Msa1257840:intron | 40.0% |
| ! | GAGAGAGCACATTTGATCTT+TGG | - | chr8_2:58824535-58824554 | Msa1257840:intron | 40.0% |
| CTATATCTGCAGGATTACAC+TGG | - | chr8_2:58824793-58824812 | Msa1257840:intron | 40.0% | |
| AACCTATACGCTGTCATTCT+TGG | - | chr8_2:58824835-58824854 | Msa1257840:CDS | 40.0% | |
| GACAAGAGTAAAGTAAAGGG+TGG | - | chr8_2:58824859-58824878 | Msa1257840:CDS | 40.0% | |
| AGTAAAGTAAAGGGTGGAAG+TGG | - | chr8_2:58824865-58824884 | Msa1257840:CDS | 40.0% | |
| TCAACAGCAAATCCGAAGAT+AGG | - | chr8_2:58824896-58824915 | Msa1257840:CDS | 40.0% | |
| TTAACTGACCAAGAACTCCA+GGG | + | chr8_2:58824951-58824970 | None:intergenic | 40.0% | |
| TTTAACTGACCAAGAACTCC+AGG | + | chr8_2:58824952-58824971 | None:intergenic | 40.0% | |
| AAGAAGAAACATGCATCTGG+AGG | - | chr8_2:58825295-58825314 | Msa1257840:intron | 40.0% | |
| ! | ATTCAAGCATCTTTGAAGGG+AGG | - | chr8_2:58823867-58823886 | Msa1257840:intron | 40.0% |
| AAAGATCAAATGTACTCCCC+CGG | + | chr8_2:58825959-58825978 | None:intergenic | 40.0% | |
| ! | GAGAGAGCACATTTGATCTT+TGG | - | chr8_2:58824535-58824554 | Msa1257840:intron | 40.0% |
| TGGTCTCATGAAGCAATGAT+TGG | - | chr8_2:58826210-58826229 | Msa1257840:intron | 40.0% | |
| GGTCTCATGAAGCAATGATT+GGG | - | chr8_2:58826211-58826230 | Msa1257840:intron | 40.0% | |
| AACCTATACGCTGTCATTCT+TGG | - | chr8_2:58824835-58824854 | Msa1257840:CDS | 40.0% | |
| GACAAGAGTAAAGTAAAGGG+TGG | - | chr8_2:58824859-58824878 | Msa1257840:CDS | 40.0% | |
| AGTAAAGTAAAGGGTGGAAG+TGG | - | chr8_2:58824865-58824884 | Msa1257840:CDS | 40.0% | |
| TCAACAGCAAATCCGAAGAT+AGG | - | chr8_2:58824896-58824915 | Msa1257840:CDS | 40.0% | |
| TTTAACTGACCAAGAACTCC+GGG | + | chr8_2:58824952-58824971 | None:intergenic | 40.0% | |
| AAGAAGAAACATGCATCTGG+AGG | - | chr8_2:58825295-58825314 | Msa1257840:intron | 40.0% | |
| TGAAAGTGGTAGCATGTTTG+AGG | - | chr8_2:58827018-58827037 | Msa1257840:intron | 40.0% | |
| GAAAGTGGTAGCATGTTTGA+GGG | - | chr8_2:58827019-58827038 | Msa1257840:intron | 40.0% | |
| CAATGCACAAGAGAGTAGTT+GGG | - | chr8_2:58827084-58827103 | Msa1257840:intron | 40.0% | |
| AATGCACAAGAGAGTAGTTG+GGG | - | chr8_2:58827085-58827104 | Msa1257840:intron | 40.0% | |
| CAACACTATACAAATCCCCA+AGG | + | chr8_2:58827162-58827181 | None:intergenic | 40.0% | |
| ! | GGGATTTGTATAGTGTTGCT+TGG | - | chr8_2:58827164-58827183 | Msa1257840:intron | 40.0% |
| CGCTGCATAATACAAACCAA+AGG | + | chr8_2:58827461-58827480 | None:intergenic | 40.0% | |
| CGAGTCGCACAATCTAAAAA+GGG | - | chr8_2:58827479-58827498 | Msa1257840:intron | 40.0% | |
| GGTTCTCATGTGATGCAATA+TGG | - | chr8_2:58827673-58827692 | Msa1257840:intron | 40.0% | |
| ! | GATCCTAGTTTGTCATTGTG+AGG | + | chr8_2:58827769-58827788 | None:intergenic | 40.0% |
| ! | GAATCATTTAGATGGTAGCG+TGG | - | chr8_2:58828011-58828030 | Msa1257840:intron | 40.0% |
| !! | GTCTACCTCTTGTTGATGAT+TGG | - | chr8_2:58828103-58828122 | Msa1257840:intron | 40.0% |
| CATTCCCAATCATCAACAAG+AGG | + | chr8_2:58828111-58828130 | None:intergenic | 40.0% | |
| ! | GGTTGTTTGAAACTCACTGT+GGG | - | chr8_2:58828380-58828399 | Msa1257840:intron | 40.0% |
| TTTGCGAACATTTGCAACAG+CGG | - | chr8_2:58828439-58828458 | Msa1257840:intron | 40.0% | |
| ! | TTCTGAGGATTCTATGGAGA+AGG | - | chr8_2:58828465-58828484 | Msa1257840:intron | 40.0% |
| GCACTATAACCTCTGTTTGA+TGG | + | chr8_2:58828535-58828554 | None:intergenic | 40.0% | |
| ACTTTGTGTGGTACACTACA+TGG | - | chr8_2:58828558-58828577 | Msa1257840:CDS | 40.0% | |
| CTCGTCAATTGTGAAATTGC+TGG | - | chr8_2:58828614-58828633 | Msa1257840:CDS | 40.0% | |
| ! | ACATATATTGGAGGCGCATA+GGG | + | chr8_2:58828671-58828690 | None:intergenic | 40.0% |
| ! | AACATATATTGGAGGCGCAT+AGG | + | chr8_2:58828672-58828691 | None:intergenic | 40.0% |
| CAAGCACATCACAAGAAATG+TGG | - | chr8_2:58828787-58828806 | Msa1257840:five_prime_UTR | 40.0% | |
| TTGGATTGTGGAGTCAGTGA+AGG | + | chr8_2:58820894-58820913 | None:intergenic | 45.0% | |
| !!! | TGTCACCCTCTTGTTTTGCA+TGG | - | chr8_2:58820925-58820944 | Msa1257840:three_prime_UTR | 45.0% |
| TGGCCACAAAGATAGAACAC+CGG | + | chr8_2:58821068-58821087 | None:intergenic | 45.0% | |
| GTGTTCTATCTTTGTGGCCA+TGG | - | chr8_2:58821068-58821087 | Msa1257840:three_prime_UTR | 45.0% | |
| ATGCTGAGGTGGATGAAGTT+GGG | - | chr8_2:58821185-58821204 | Msa1257840:three_prime_UTR | 45.0% | |
| CCTAGGATTCAACTCGTTGT+TGG | + | chr8_2:58821521-58821540 | None:intergenic | 45.0% | |
| ! | CCAACAACGAGTTGAATCCT+AGG | - | chr8_2:58821518-58821537 | Msa1257840:intron | 45.0% |
| ! | TTGATGATAACTCCAGGCCT+AGG | + | chr8_2:58821538-58821557 | None:intergenic | 45.0% |
| !! | GGATGGTTGATGATAACTCC+AGG | + | chr8_2:58821544-58821563 | None:intergenic | 45.0% |
| ACATAAACATTGGGTCCCTG+TGG | + | chr8_2:58821565-58821584 | None:intergenic | 45.0% | |
| CAGGGACCCAATGTTTATGT+CGG | - | chr8_2:58821565-58821584 | Msa1257840:intron | 45.0% | |
| GGAACGCCGACATAAACATT+GGG | + | chr8_2:58821574-58821593 | None:intergenic | 45.0% | |
| AGGAACGCCGACATAAACAT+TGG | + | chr8_2:58821575-58821594 | None:intergenic | 45.0% | |
| TGTTTATGTCGGCGTTCCTA+AGG | - | chr8_2:58821576-58821595 | Msa1257840:intron | 45.0% | |
| ATTGACCTCACACAAAGTGG+TGG | - | chr8_2:58822023-58822042 | Msa1257840:CDS | 45.0% | |
| TTGACCTCACACAAAGTGGT+GGG | - | chr8_2:58822024-58822043 | Msa1257840:CDS | 45.0% | |
| ! | GTCTTTGATGGCTAGTGCAT+TGG | - | chr8_2:58822434-58822453 | Msa1257840:intron | 45.0% |
| AGTATCAAAGAGGGACCAGA+GGG | + | chr8_2:58822540-58822559 | None:intergenic | 45.0% | |
| TCCAACGCCAGTATCAAAGA+GGG | + | chr8_2:58822549-58822568 | None:intergenic | 45.0% | |
| TTCCAACGCCAGTATCAAAG+AGG | + | chr8_2:58822550-58822569 | None:intergenic | 45.0% | |
| CTCATCCAGGGTTCAAACAT+CGG | + | chr8_2:58822875-58822894 | None:intergenic | 45.0% | |
| TGTTTGAACCCTGGATGAGA+CGG | - | chr8_2:58822876-58822895 | Msa1257840:CDS | 45.0% | |
| ATTCAACTCCGTCTCATCCA+GGG | + | chr8_2:58822887-58822906 | None:intergenic | 45.0% | |
| TATTCAACTCCGTCTCATCC+AGG | + | chr8_2:58822888-58822907 | None:intergenic | 45.0% | |
| TTAAGCTTAGCTCAGCTGGT+AGG | + | chr8_2:58823071-58823090 | None:intergenic | 45.0% | |
| GACTTTAAGCTTAGCTCAGC+TGG | + | chr8_2:58823075-58823094 | None:intergenic | 45.0% | |
| ! | AAGCATCTTTGAAGGGAGGA+GGG | - | chr8_2:58823871-58823890 | Msa1257840:intron | 45.0% |
| CTCCAAGAATGACAGCGTAT+AGG | + | chr8_2:58824840-58824859 | None:intergenic | 45.0% | |
| ! | AAGCATCTTTGAAGGGAGGA+GGG | - | chr8_2:58823871-58823890 | Msa1257840:intron | 45.0% |
| ! | GGGGGAGTACATTTGATCTT+TGG | - | chr8_2:58825958-58825977 | Msa1257840:intron | 45.0% |
| ACAACAGTGAAGGTTGTCGT+TGG | - | chr8_2:58826296-58826315 | Msa1257840:intron | 45.0% | |
| CAACAGTGAAGGTTGTCGTT+GGG | - | chr8_2:58826297-58826316 | Msa1257840:intron | 45.0% | |
| CTCCAAGAATGACAGCGTAT+AGG | + | chr8_2:58824840-58824859 | None:intergenic | 45.0% | |
| TTAACTGACCAAGAACTCCG+GGG | + | chr8_2:58826540-58826559 | None:intergenic | 45.0% | |
| CCAACTACTCTCTTGTGCAT+TGG | + | chr8_2:58827086-58827105 | None:intergenic | 45.0% | |
| CCAATGCACAAGAGAGTAGT+TGG | - | chr8_2:58827083-58827102 | Msa1257840:intron | 45.0% | |
| CAGAGTACATCACTTGCCTT+GGG | - | chr8_2:58827143-58827162 | Msa1257840:intron | 45.0% | |
| AGAGTACATCACTTGCCTTG+GGG | - | chr8_2:58827144-58827163 | Msa1257840:intron | 45.0% | |
| CGGTAGGTCTCTGAACTATT+TGG | + | chr8_2:58827382-58827401 | None:intergenic | 45.0% | |
| GCGAGTCGCACAATCTAAAA+AGG | - | chr8_2:58827478-58827497 | Msa1257840:intron | 45.0% | |
| !! | CCAAGGTTTTGATCCTGCAA+CGG | - | chr8_2:58827732-58827751 | Msa1257840:intron | 45.0% |
| GTTTGTCATTGTGAGGAGGA+AGG | + | chr8_2:58827762-58827781 | None:intergenic | 45.0% | |
| ! | CCTAGTTTGTCATTGTGAGG+AGG | + | chr8_2:58827766-58827785 | None:intergenic | 45.0% |
| CCTCCTCACAATGACAAACT+AGG | - | chr8_2:58827763-58827782 | Msa1257840:intron | 45.0% | |
| ! | GATGGTAGCGTGGAATTGAT+TGG | - | chr8_2:58828021-58828040 | Msa1257840:intron | 45.0% |
| TCATCAACAAGAGGTAGACC+AGG | + | chr8_2:58828102-58828121 | None:intergenic | 45.0% | |
| ! | CCTGAAGGCATGTCTAGTAT+CGG | - | chr8_2:58828201-58828220 | Msa1257840:CDS | 45.0% |
| ! | CGGTTGTTTGAAACTCACTG+TGG | - | chr8_2:58828379-58828398 | Msa1257840:intron | 45.0% |
| ! | CGGTGTTTCTGAGGATTCTA+TGG | - | chr8_2:58828459-58828478 | Msa1257840:intron | 45.0% |
| AAGGCATGTATAGCAGCATG+TGG | - | chr8_2:58828484-58828503 | Msa1257840:intron | 45.0% | |
| CATGTATAGCAGCATGTGGT+GGG | - | chr8_2:58828488-58828507 | Msa1257840:intron | 45.0% | |
| ATTGAGAGAATGGTTGGGTG+AGG | - | chr8_2:58828823-58828842 | Msa1257840:five_prime_UTR | 45.0% | |
| !!! | ACATATTTTAAATTTATTTT+GGG | - | chr8_2:58823519-58823538 | Msa1257840:intron | 5.0% |
| !!! | TAATTTCATATTTTATAATA+GGG | - | chr8_2:58823542-58823561 | Msa1257840:intron | 5.0% |
| !!! | ACATATTTTAATTTTATTTT+TGG | + | chr8_2:58823924-58823943 | None:intergenic | 5.0% |
| !!! | ACATATTTTAATTTTATTTT+TGG | + | chr8_2:58823924-58823943 | None:intergenic | 5.0% |
| !!! | TTTTTAATAATTTTGTAATT+TGG | + | chr8_2:58827279-58827298 | None:intergenic | 5.0% |
| GGGCTCATAAAAACAGGGGA+AGG | + | chr8_2:58820998-58821017 | None:intergenic | 50.0% | |
| GTGAGCAACAACAACAGCCA+TGG | + | chr8_2:58821088-58821107 | None:intergenic | 50.0% | |
| GTTGCTCACTATGCACGGTT+CGG | - | chr8_2:58821099-58821118 | Msa1257840:three_prime_UTR | 50.0% | |
| AAGACCGAACCGTTCAGAGT+GGG | - | chr8_2:58821126-58821145 | Msa1257840:three_prime_UTR | 50.0% | |
| GATGCTGAGGTGGATGAAGT+TGG | - | chr8_2:58821184-58821203 | Msa1257840:three_prime_UTR | 50.0% | |
| TGGATGAAGTTGGGACACGA+TGG | - | chr8_2:58821194-58821213 | Msa1257840:exon | 50.0% | |
| GGATGAAGTTGGGACACGAT+GGG | - | chr8_2:58821195-58821214 | Msa1257840:exon | 50.0% | |
| ! | GTTCTTGTGGCTGGTTCAAG+TGG | - | chr8_2:58821220-58821239 | Msa1257840:CDS | 50.0% |
| ! | GTGGCTGGTTCAAGTGGTTA+CGG | - | chr8_2:58821226-58821245 | Msa1257840:CDS | 50.0% |
| ! | AACGAGTTGAATCCTAGGCC+TGG | - | chr8_2:58821523-58821542 | Msa1257840:intron | 50.0% |
| AAACATTGGGTCCCTGTGGA+TGG | + | chr8_2:58821561-58821580 | None:intergenic | 50.0% | |
| ATGTCCCACCACTTTGTGTG+AGG | + | chr8_2:58822031-58822050 | None:intergenic | 50.0% | |
| GGGTCCCTTAGAGGATTATG+AGG | + | chr8_2:58822122-58822141 | None:intergenic | 50.0% | |
| CAGTATCAAAGAGGGACCAG+AGG | + | chr8_2:58822541-58822560 | None:intergenic | 50.0% | |
| CTCTGGTCCCTCTTTGATAC+TGG | - | chr8_2:58822539-58822558 | Msa1257840:intron | 50.0% | |
| TCCCTCTTTGATACTGGCGT+TGG | - | chr8_2:58822545-58822564 | Msa1257840:intron | 50.0% | |
| ! | CAAGCATCTTTGAAGGGAGG+AGG | - | chr8_2:58823870-58823889 | Msa1257840:intron | 50.0% |
| AGTAAAGGGTGGAAGTGGCA+AGG | - | chr8_2:58824870-58824889 | Msa1257840:CDS | 50.0% | |
| ! | CAAGCATCTTTGAAGGGAGG+AGG | - | chr8_2:58823870-58823889 | Msa1257840:intron | 50.0% |
| AGTAAAGGGTGGAAGTGGCA+AGG | - | chr8_2:58824870-58824889 | Msa1257840:CDS | 50.0% | |
| !! | GTTTGAGGGTGTCATGCCAA+AGG | - | chr8_2:58827033-58827052 | Msa1257840:intron | 50.0% |
| AGTTGGGGAACTTACTGTCC+TGG | - | chr8_2:58827100-58827119 | Msa1257840:intron | 50.0% | |
| ! | CAAGTGATGTACTCTGGAGG+TGG | + | chr8_2:58827139-58827158 | None:intergenic | 50.0% |
| AGGCAAGTGATGTACTCTGG+AGG | + | chr8_2:58827142-58827161 | None:intergenic | 50.0% | |
| CCAAGGCAAGTGATGTACTC+TGG | + | chr8_2:58827145-58827164 | None:intergenic | 50.0% | |
| CCAGAGTACATCACTTGCCT+TGG | - | chr8_2:58827142-58827161 | Msa1257840:intron | 50.0% | |
| TGCTTGGATGGAAGACAGAC+AGG | - | chr8_2:58827180-58827199 | Msa1257840:intron | 50.0% | |
| CCGTTGCAGGATCAAAACCT+TGG | + | chr8_2:58827735-58827754 | None:intergenic | 50.0% | |
| CCTTGAGAAGATTGCGGAGA+CGG | - | chr8_2:58827978-58827997 | Msa1257840:intron | 50.0% | |
| TTGCGGAGACGGTGAAACAT+AGG | - | chr8_2:58827989-58828008 | Msa1257840:intron | 50.0% | |
| CTACAGGCTCTTAGAGAACC+TGG | - | chr8_2:58828081-58828100 | Msa1257840:intron | 50.0% | |
| AGCACGACACTTTCACCTGA+AGG | - | chr8_2:58828186-58828205 | Msa1257840:CDS | 50.0% | |
| CCGATACTAGACATGCCTTC+AGG | + | chr8_2:58828204-58828223 | None:intergenic | 50.0% | |
| TGTGGGTCACTGACACAGTA+TGG | - | chr8_2:58828397-58828416 | Msa1257840:intron | 50.0% | |
| GTGGGTCACTGACACAGTAT+GGG | - | chr8_2:58828398-58828417 | Msa1257840:intron | 50.0% | |
| ! | TTGCAACAGCGGTGTTTCTG+AGG | - | chr8_2:58828450-58828469 | Msa1257840:intron | 50.0% |
| GCATGTATAGCAGCATGTGG+TGG | - | chr8_2:58828487-58828506 | Msa1257840:intron | 50.0% | |
| CAAGACCGAACCGTTCAGAG+TGG | - | chr8_2:58821125-58821144 | Msa1257840:three_prime_UTR | 55.0% | |
| GAGTCCCACTCTGAACGGTT+CGG | + | chr8_2:58821133-58821152 | None:intergenic | 55.0% | |
| GAACCGTTCAGAGTGGGACT+CGG | - | chr8_2:58821132-58821151 | Msa1257840:three_prime_UTR | 55.0% | |
| TGACCGAGTCCCACTCTGAA+CGG | + | chr8_2:58821138-58821157 | None:intergenic | 55.0% | |
| GGTCATTCGATTGCCGAGTG+AGG | - | chr8_2:58821153-58821172 | Msa1257840:three_prime_UTR | 55.0% | |
| CATTCGATTGCCGAGTGAGG+TGG | - | chr8_2:58821156-58821175 | Msa1257840:three_prime_UTR | 55.0% | |
| GCATCATCCACCACCTCACT+CGG | + | chr8_2:58821169-58821188 | None:intergenic | 55.0% | |
| !! | TGAGGTGGTGGATGATGCTG+AGG | - | chr8_2:58821171-58821190 | Msa1257840:three_prime_UTR | 55.0% |
| !! | GACACGATGGGCTGTTCTTG+TGG | - | chr8_2:58821207-58821226 | Msa1257840:CDS | 55.0% |
| AAGGTTGCACCGTGCCTTAG+AGG | - | chr8_2:58822215-58822234 | Msa1257840:intron | 55.0% | |
| GGTGGCTGAGGTTTAAACCC+CGG | - | chr8_2:58823021-58823040 | Msa1257840:intron | 55.0% | |
| AACTCCAGGGCCTCCATGAT+CGG | + | chr8_2:58824938-58824957 | None:intergenic | 55.0% | |
| GGGAACTTACTGTCCTGGAG+TGG | - | chr8_2:58827105-58827124 | Msa1257840:intron | 55.0% | |
| ! | ATGTACTCTGGAGGTGGAGC+AGG | + | chr8_2:58827133-58827152 | None:intergenic | 55.0% |
| CCGTCTCCGCAATCTTCTCA+AGG | + | chr8_2:58827981-58828000 | None:intergenic | 55.0% | |
| TCGATTGCCGAGTGAGGTGG+TGG | - | chr8_2:58821159-58821178 | Msa1257840:three_prime_UTR | 60.0% | |
| !! | GGTGGTGGATGATGCTGAGG+TGG | - | chr8_2:58821174-58821193 | Msa1257840:three_prime_UTR | 60.0% |
| !! | CGATGGGCTGTTCTTGTGGC+TGG | - | chr8_2:58821211-58821230 | Msa1257840:CDS | 60.0% |
| GGTGGCCGATGTTTGAACCC+TGG | - | chr8_2:58822867-58822886 | Msa1257840:CDS | 60.0% | |
| GGTGGCTGAGGTTTGAACCC+CGG | - | chr8_2:58822969-58822988 | Msa1257840:intron | 60.0% | |
| TACTCCGATCATGGAGGCCC+TGG | - | chr8_2:58824931-58824950 | Msa1257840:CDS | 60.0% | |
| CATGGAGGCCCTGGAGTTCT+TGG | - | chr8_2:58824940-58824959 | Msa1257840:CDS | 60.0% | |
| TACTCCGATCATGGAGGCCC+CGG | - | chr8_2:58824931-58824950 | Msa1257840:CDS | 60.0% | |
| AACTCCGGGGCCTCCATGAT+CGG | + | chr8_2:58826527-58826546 | None:intergenic | 60.0% | |
| GGAGGAAGGTTCACCGTTGC+AGG | + | chr8_2:58827748-58827767 | None:intergenic | 60.0% | |
| CATGGAGGCCCCGGAGTTCT+TGG | - | chr8_2:58826529-58826548 | Msa1257840:intron | 65.0% | |
| GGTGGAGCAGGTTCCACTCC+AGG | + | chr8_2:58827121-58827140 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 58820813 | 58828952 | 58820813 | ID=Msa1257840;Name=Msa1257840 |
| chr8_2 | mRNA | 58820813 | 58828952 | 58820813 | ID=Msa1257840-mRNA-1;Parent=Msa1257840;Name=Msa1257840-mRNA-1;_AED=0.11;_eAED=0.11;_QI=197|0.5|0.63|1|1|1|11|394|557 |
| chr8_2 | exon | 58820813 | 58821389 | 58820813 | ID=Msa1257840-mRNA-1:exon:18216;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58821652 | 58821828 | 58821652 | ID=Msa1257840-mRNA-1:exon:18215;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58821922 | 58822131 | 58821922 | ID=Msa1257840-mRNA-1:exon:18214;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58822238 | 58822286 | 58822238 | ID=Msa1257840-mRNA-1:exon:18213;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58822619 | 58822767 | 58822619 | ID=Msa1257840-mRNA-1:exon:18212;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58822856 | 58822941 | 58822856 | ID=Msa1257840-mRNA-1:exon:18211;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58823215 | 58823371 | 58823215 | ID=Msa1257840-mRNA-1:exon:18210;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58824435 | 58824520 | 58824435 | ID=Msa1257840-mRNA-1:exon:18209;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58824804 | 58824960 | 58824804 | ID=Msa1257840-mRNA-1:exon:18208;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58828168 | 58828332 | 58828168 | ID=Msa1257840-mRNA-1:exon:18207;Parent=Msa1257840-mRNA-1 |
| chr8_2 | exon | 58828501 | 58828952 | 58828501 | ID=Msa1257840-mRNA-1:exon:18206;Parent=Msa1257840-mRNA-1 |
| chr8_2 | five_prime_UTR | 58828756 | 58828952 | 58828756 | ID=Msa1257840-mRNA-1:five_prime_utr;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58828501 | 58828755 | 58828501 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58828168 | 58828332 | 58828168 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58824804 | 58824960 | 58824804 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58824435 | 58824520 | 58824435 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58823215 | 58823371 | 58823215 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58822856 | 58822941 | 58822856 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58822619 | 58822767 | 58822619 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58822238 | 58822286 | 58822238 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58821922 | 58822131 | 58821922 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58821652 | 58821828 | 58821652 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | CDS | 58821207 | 58821389 | 58821207 | ID=Msa1257840-mRNA-1:cds;Parent=Msa1257840-mRNA-1 |
| chr8_2 | three_prime_UTR | 58820813 | 58821206 | 58820813 | ID=Msa1257840-mRNA-1:three_prime_utr;Parent=Msa1257840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
